View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16602_low_3 (Length: 275)
Name: NF16602_low_3
Description: NF16602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16602_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 7258070 - 7258337
Alignment:
| Q |
1 |
tcatcacttcctgaaataacataacttccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataa |
100 |
Q |
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| T |
7258070 |
tcatcacttcctgaaataacataacttccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataa |
7258169 |
T |
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| Q |
101 |
gaatatttccataaactcgacacaaacagcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacaga |
200 |
Q |
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| T |
7258170 |
gaatatttccataaactcgacacaaacagcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacaga |
7258269 |
T |
|
| Q |
201 |
atgttcagtgcacaatatgtatattgagtgaacctttgcattcttttagtatgataaatctctctgct |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7258270 |
atgttcagtgcacaatatgtatattgagtgaacctttgcattcttttagtatgataaatctctctgct |
7258337 |
T |
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