View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16604_high_26 (Length: 264)
Name: NF16604_high_26
Description: NF16604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16604_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 17081550 - 17081778
Alignment:
| Q |
17 |
caaaggataaatacggaaggtggtaggttgagtaggagagaaagaaaaagtgatacgcccctcttggttcgattgcttatcgctatttttccatttttgg |
116 |
Q |
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| T |
17081550 |
caaaggatgaatgtggaaggtggtaggttgagtaggagagaaagaaaaagtgatacgcccctcttggttcgattgcttatcgctatttttccatttttgg |
17081649 |
T |
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| Q |
117 |
gcacatggacaaagatgctgtaaaagtttcctccatagtgaatttgagctttgatgagttggattatgattctttttatggaatttgaatagatttgtaa |
216 |
Q |
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| T |
17081650 |
gcacatggacaaagatgctgtaaaagtttcctccatagtgaatttgagctttgatgagttggattatgattctttttatggaatttgaatagatttgtaa |
17081749 |
T |
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| Q |
217 |
tgtgaaatcaacaacagatacgatgtata |
245 |
Q |
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| T |
17081750 |
tgtgaaatcaacaacagatacgatgtata |
17081778 |
T |
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