View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16604_high_27 (Length: 253)
Name: NF16604_high_27
Description: NF16604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16604_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22704182 - 22703952
Alignment:
| Q |
1 |
attgacaaggttagcccttttattgaagttgaaactagttactaaacttggttagattgtataactagttaccaaagttggttagattataaaatgactt |
100 |
Q |
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| T |
22704182 |
attgacaaggttagcccttttattgaagttgaaactagttactaaacttggttagattgtataactagttaccaaagttggttagattataaaatgactt |
22704083 |
T |
|
| Q |
101 |
ttacaagtactttaagatatcatgagatataagtgttatcttcaagatatttcacgagtaataaaatgattattcttaatgtggttttttctatttccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22704082 |
ttacaagtactttaagatatcatgagatataagtgttatcttcaagatatttcacgagtaataaaatgattattcttaatgtggttttttctatttccat |
22703983 |
T |
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| Q |
201 |
gttagaatgtgaggttttaataccatattcc |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
22703982 |
gttagaatgtgaggttttaataccatattcc |
22703952 |
T |
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