View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16604_low_1 (Length: 986)

Name: NF16604_low_1
Description: NF16604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16604_low_1
NF16604_low_1
[»] chr3 (45 HSPs)
chr3 (579-968)||(55271930-55272319)
chr3 (59-225)||(26662428-26662597)
chr3 (59-225)||(9106274-9106443)
chr3 (59-225)||(9595870-9596039)
chr3 (59-225)||(30947801-30947970)
chr3 (59-225)||(6097574-6097743)
chr3 (59-225)||(46237648-46237817)
chr3 (59-225)||(33413902-33414072)
chr3 (362-519)||(55272385-55272544)
chr3 (59-225)||(2941816-2941985)
chr3 (59-225)||(3475297-3475466)
chr3 (59-225)||(19284678-19284847)
chr3 (59-225)||(54379170-54379338)
chr3 (59-225)||(10986359-10986528)
chr3 (59-225)||(26960633-26960802)
chr3 (54-225)||(47335039-47335218)
chr3 (240-321)||(55272599-55272680)
chr3 (171-225)||(51846785-51846839)
chr3 (63-131)||(50755163-50755234)
chr3 (62-131)||(19384382-19384454)
chr3 (171-225)||(34563352-34563406)
chr3 (171-225)||(41192355-41192409)
chr3 (164-218)||(53594982-53595036)
chr3 (62-125)||(51361524-51361590)
chr3 (163-218)||(51681999-51682054)
chr3 (164-218)||(47728402-47728456)
chr3 (164-205)||(19385313-19385354)
chr3 (164-205)||(51362436-51362477)
chr3 (166-205)||(50754032-50754071)
chr3 (166-205)||(52987650-52987689)
chr3 (62-106)||(8719133-8719180)
chr3 (62-106)||(9071020-9071067)
chr3 (173-218)||(23755299-23755344)
chr3 (90-131)||(31853157-31853198)
chr3 (58-90)||(17620733-17620765)
chr3 (166-218)||(28299952-28300004)
chr3 (166-225)||(7045300-7045358)
chr3 (175-218)||(32233005-32233048)
chr3 (59-90)||(34562397-34562428)
chr3 (164-218)||(37319458-37319512)
chr3 (166-208)||(39099220-39099262)
chr3 (169-202)||(16277417-16277450)
chr3 (169-218)||(23699341-23699390)
chr3 (169-218)||(23717796-23717845)
chr3 (169-218)||(23736252-23736301)
[»] chr8 (47 HSPs)
chr8 (59-225)||(19784278-19784447)
chr8 (59-225)||(34633211-34633380)
chr8 (59-225)||(41451112-41451281)
chr8 (59-225)||(41099189-41099361)
chr8 (59-225)||(10237361-10237530)
chr8 (59-225)||(1149913-1150082)
chr8 (59-225)||(15227037-15227206)
chr8 (59-225)||(43690647-43690806)
chr8 (59-225)||(30413921-30414090)
chr8 (91-225)||(7857687-7857821)
chr8 (62-131)||(4835519-4835591)
chr8 (62-125)||(39657709-39657775)
chr8 (64-130)||(1209758-1209827)
chr8 (171-225)||(9852277-9852331)
chr8 (171-225)||(23396484-23396538)
chr8 (171-225)||(34648133-34648187)
chr8 (62-130)||(2751207-2751278)
chr8 (72-131)||(4840974-4841036)
chr8 (169-225)||(15260854-15260910)
chr8 (164-218)||(13526669-13526723)
chr8 (164-218)||(13616204-13616258)
chr8 (171-225)||(35302591-35302645)
chr8 (183-225)||(40023279-40023321)
chr8 (169-218)||(40247288-40247337)
chr8 (166-206)||(8550529-8550569)
chr8 (166-205)||(32987445-32987484)
chr8 (62-123)||(7059144-7059208)
chr8 (166-203)||(4836701-4836738)
chr8 (166-203)||(4842146-4842183)
chr8 (164-205)||(42433727-42433768)
chr8 (186-235)||(42434566-42434614)
chr8 (182-218)||(10443586-10443622)
chr8 (175-218)||(2522881-2522924)
chr8 (166-205)||(7614094-7614133)
chr8 (166-217)||(12355437-12355488)
chr8 (164-218)||(28698578-28698633)
chr8 (59-90)||(34647169-34647200)
chr8 (59-90)||(35301627-35301658)
chr8 (166-205)||(39022001-39022040)
chr8 (59-90)||(40022386-40022417)
chr8 (60-90)||(185880-185910)
chr8 (172-218)||(30651963-30652009)
chr8 (170-203)||(7058142-7058175)
chr8 (166-207)||(15181815-15181856)
chr8 (62-106)||(15259856-15259903)
chr8 (61-90)||(23397458-23397487)
chr8 (186-227)||(40004718-40004758)
[»] scaffold0045 (1 HSPs)
scaffold0045 (61-225)||(33691-33858)
[»] chr4 (50 HSPs)
chr4 (59-225)||(11785981-11786150)
chr4 (59-225)||(11798148-11798317)
chr4 (59-225)||(13635615-13635784)
chr4 (59-225)||(49425947-49426116)
chr4 (59-225)||(15051026-15051195)
chr4 (60-225)||(30597706-30597874)
chr4 (70-225)||(51921166-51921324)
chr4 (59-225)||(27865627-27865796)
chr4 (63-225)||(49492406-49492571)
chr4 (59-225)||(53441327-53441496)
chr4 (59-225)||(46672446-46672614)
chr4 (90-225)||(1621882-1622018)
chr4 (90-225)||(55765488-55765623)
chr4 (72-225)||(35291451-35291607)
chr4 (90-225)||(36011850-36011985)
chr4 (156-225)||(10472504-10472573)
chr4 (153-222)||(26578176-26578245)
chr4 (153-225)||(38244951-38245023)
chr4 (62-131)||(45256866-45256938)
chr4 (64-131)||(638965-639035)
chr4 (59-130)||(50644642-50644716)
chr4 (166-225)||(1729615-1729674)
chr4 (158-225)||(38010148-38010215)
chr4 (186-232)||(805102-805148)
chr4 (62-131)||(10473619-10473691)
chr4 (175-225)||(20861587-20861637)
chr4 (164-218)||(25574126-25574180)
chr4 (62-131)||(26577262-26577334)
chr4 (171-225)||(30357814-30357868)
chr4 (62-125)||(51836328-51836394)
chr4 (164-218)||(16298935-16298989)
chr4 (170-218)||(24686586-24686634)
chr4 (166-205)||(4168384-4168423)
chr4 (166-205)||(26447412-26447451)
chr4 (166-205)||(36621701-36621740)
chr4 (59-104)||(30358835-30358883)
chr4 (164-205)||(22181243-22181284)
chr4 (164-205)||(29826604-29826645)
chr4 (164-205)||(50643769-50643810)
chr4 (166-202)||(637883-637919)
chr4 (186-234)||(55782641-55782688)
chr4 (186-234)||(55846821-55846868)
chr4 (62-104)||(22180207-22180252)
chr4 (166-205)||(27764266-27764305)
chr4 (166-205)||(45256001-45256040)
chr4 (101-131)||(6385410-6385440)
chr4 (60-90)||(25715642-25715672)
chr4 (186-232)||(50070714-50070759)
chr4 (60-90)||(54895598-54895628)
chr4 (186-227)||(14499251-14499291)
[»] chr1 (42 HSPs)
chr1 (59-225)||(49936827-49936996)
chr1 (59-225)||(24635933-24636102)
chr1 (59-225)||(20434612-20434781)
chr1 (59-225)||(25888919-25889087)
chr1 (59-225)||(43452549-43452718)
chr1 (59-225)||(48762221-48762390)
chr1 (59-225)||(6314122-6314292)
chr1 (59-225)||(19897650-19897819)
chr1 (59-225)||(16975961-16976131)
chr1 (63-225)||(18618842-18619006)
chr1 (90-225)||(50351810-50351945)
chr1 (129-225)||(28375471-28375567)
chr1 (153-224)||(34369668-34369739)
chr1 (153-225)||(4097895-4097967)
chr1 (153-225)||(23175509-23175581)
chr1 (155-225)||(11421601-11421671)
chr1 (59-130)||(23817412-23817486)
chr1 (62-131)||(11422541-11422613)
chr1 (171-225)||(21256777-21256831)
chr1 (164-218)||(31529663-31529717)
chr1 (62-130)||(23920972-23921043)
chr1 (62-131)||(23174403-23174475)
chr1 (164-218)||(33097419-33097473)
chr1 (186-227)||(37228364-37228405)
chr1 (166-218)||(37639355-37639407)
chr1 (62-124)||(21641595-21641660)
chr1 (167-218)||(51801734-51801785)
chr1 (62-131)||(4097111-4097182)
chr1 (171-225)||(31083369-31083423)
chr1 (186-232)||(41033946-41033992)
chr1 (164-214)||(44260536-44260586)
chr1 (164-218)||(44688608-44688662)
chr1 (166-218)||(35198181-35198233)
chr1 (166-205)||(18056810-18056849)
chr1 (62-123)||(180832-180896)
chr1 (171-225)||(20507286-20507340)
chr1 (169-205)||(16115877-16115913)
chr1 (60-90)||(17893071-17893101)
chr1 (59-104)||(21255838-21255886)
chr1 (59-89)||(31084418-31084448)
chr1 (60-90)||(32595298-32595328)
chr1 (186-227)||(19861717-19861757)
[»] chr6 (25 HSPs)
chr6 (59-225)||(1449549-1449718)
chr6 (59-225)||(6900810-6900979)
chr6 (59-225)||(7089089-7089258)
chr6 (59-225)||(15493181-15493350)
chr6 (61-225)||(31216669-31216836)
chr6 (90-225)||(1536820-1536955)
chr6 (151-225)||(34870071-34870145)
chr6 (59-152)||(34869953-34870049)
chr6 (171-225)||(30908659-30908713)
chr6 (62-125)||(878367-878433)
chr6 (174-225)||(7764448-7764499)
chr6 (166-205)||(35119261-35119300)
chr6 (164-218)||(4338618-4338672)
chr6 (164-218)||(16968021-16968075)
chr6 (166-218)||(18611202-18611254)
chr6 (169-205)||(33346374-33346410)
chr6 (59-90)||(7765419-7765450)
chr6 (59-90)||(18755661-18755692)
chr6 (166-201)||(24737691-24737726)
chr6 (175-218)||(27079939-27079982)
chr6 (166-205)||(29157252-29157291)
chr6 (60-90)||(20522863-20522893)
chr6 (59-104)||(30909437-30909485)
chr6 (186-227)||(28132783-28132823)
chr6 (90-131)||(35121490-35121530)
[»] chr5 (24 HSPs)
chr5 (59-225)||(14940246-14940415)
chr5 (59-225)||(26637727-26637896)
chr5 (59-225)||(37456687-37456856)
chr5 (59-225)||(3883925-3884094)
chr5 (59-225)||(14394475-14394644)
chr5 (59-225)||(15416671-15416840)
chr5 (59-225)||(13552990-13553159)
chr5 (151-225)||(30783442-30783516)
chr5 (59-152)||(30783538-30783633)
chr5 (166-218)||(16668794-16668846)
chr5 (164-218)||(16552637-16552691)
chr5 (164-218)||(33868169-33868223)
chr5 (167-214)||(4674978-4675025)
chr5 (166-205)||(13362796-13362835)
chr5 (166-205)||(25017217-25017256)
chr5 (62-123)||(28069248-28069312)
chr5 (166-218)||(18465556-18465608)
chr5 (166-202)||(34329156-34329192)
chr5 (166-205)||(28070153-28070192)
chr5 (166-205)||(42512225-42512264)
chr5 (60-90)||(23155524-23155554)
chr5 (186-232)||(25189817-25189862)
chr5 (60-89)||(25671304-25671333)
chr5 (90-131)||(34330157-34330198)
[»] chr7 (29 HSPs)
chr7 (59-225)||(763704-763873)
chr7 (59-225)||(30884112-30884281)
chr7 (59-225)||(46358527-46358696)
chr7 (59-225)||(16933133-16933303)
chr7 (59-225)||(16938516-16938686)
chr7 (59-225)||(47340153-47340323)
chr7 (59-225)||(31660076-31660245)
chr7 (59-225)||(41911002-41911168)
chr7 (59-217)||(35736963-35737124)
chr7 (143-225)||(20000651-20000733)
chr7 (62-124)||(48692028-48692093)
chr7 (62-131)||(32685845-32685917)
chr7 (164-218)||(34875503-34875557)
chr7 (62-131)||(46572575-46572647)
chr7 (164-225)||(11732645-11732706)
chr7 (166-218)||(5757400-5757452)
chr7 (171-225)||(24359878-24359932)
chr7 (62-125)||(15973861-15973927)
chr7 (164-218)||(39007647-39007701)
chr7 (164-218)||(44141249-44141303)
chr7 (166-205)||(46024053-46024092)
chr7 (20-55)||(47039971-47040006)
chr7 (164-205)||(15974934-15974975)
chr7 (59-107)||(34228603-34228654)
chr7 (166-205)||(30428899-30428938)
chr7 (59-90)||(33798748-33798779)
chr7 (59-90)||(48830614-48830645)
chr7 (164-225)||(25778844-25778904)
chr7 (166-215)||(27335629-27335677)
[»] chr2 (29 HSPs)
chr2 (59-225)||(7487144-7487313)
chr2 (59-225)||(8149838-8150007)
chr2 (59-225)||(8154462-8154631)
chr2 (59-225)||(15016456-15016625)
chr2 (59-225)||(39355042-39355211)
chr2 (59-225)||(34464718-34464887)
chr2 (59-225)||(1292069-1292238)
chr2 (91-225)||(9143592-9143726)
chr2 (153-225)||(2263580-2263652)
chr2 (62-131)||(18297169-18297241)
chr2 (171-225)||(18762874-18762928)
chr2 (186-233)||(21155433-21155480)
chr2 (186-232)||(27974291-27974337)
chr2 (186-232)||(28060820-28060866)
chr2 (164-218)||(5098730-5098784)
chr2 (62-131)||(25193962-25194034)
chr2 (171-225)||(41346045-41346099)
chr2 (164-216)||(39548058-39548110)
chr2 (166-205)||(18298111-18298150)
chr2 (164-218)||(16142073-16142127)
chr2 (164-218)||(25995300-25995354)
chr2 (172-218)||(40853685-40853731)
chr2 (90-131)||(4578591-4578632)
chr2 (94-141)||(18762928-18762975)
chr2 (166-205)||(20709800-20709839)
chr2 (166-205)||(25192918-25192957)
chr2 (59-90)||(41345085-41345116)
chr2 (164-218)||(13081858-13081912)
chr2 (164-218)||(36636935-36636989)
[»] scaffold0074 (1 HSPs)
scaffold0074 (59-225)||(24281-24450)
[»] scaffold0581 (1 HSPs)
scaffold0581 (90-225)||(8345-8480)
[»] scaffold0571 (2 HSPs)
scaffold0571 (151-225)||(661-735)
scaffold0571 (59-152)||(543-639)
[»] scaffold0338 (1 HSPs)
scaffold0338 (63-131)||(6484-6555)
[»] scaffold0238 (1 HSPs)
scaffold0238 (164-205)||(25230-25271)
[»] scaffold0154 (1 HSPs)
scaffold0154 (186-232)||(37483-37528)
[»] scaffold0544 (1 HSPs)
scaffold0544 (166-205)||(10675-10714)
[»] scaffold0460 (1 HSPs)
scaffold0460 (175-218)||(1618-1661)
[»] scaffold0097 (1 HSPs)
scaffold0097 (166-205)||(13639-13678)
[»] scaffold0221 (1 HSPs)
scaffold0221 (186-232)||(20479-20524)
[»] scaffold0455 (1 HSPs)
scaffold0455 (186-227)||(10689-10729)


Alignment Details
Target: chr3 (Bit Score: 386; Significance: 0; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 579 - 968
Target Start/End: Complemental strand, 55272319 - 55271930
Alignment:
Q  579 acagttgagggagaattgcttcaaaagggttcgacaagacagaagcagattgctttggaaatgtaggctctcttcctccgatgatgactcctctcgtctt 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55272319 acagttgagggagaattgcttcaaaagggttcgacaagacagaagcagattgctttggaaatgtaggctctcttcctccgatgatgaatcctctcgtctt 55272220  T
Q  679 cttcataatcaggatgagttggatatcgtgttccgtgatattgtatctgatgaattgaataagatcaataatgatgacaatgatcttttatggaacgatg 778  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272219 cttcataatcaggatgagttggatatcgtgttccgtgatattgtatctgatgaattgaataagatcaataatgatgacaatgatcttttatggaacgatg 55272120  T
Q  779 acctcaaagcagctcatgagggtgattgccaagacattcttcttgaaatgcaaaacttattttatcaagacctcgattctcatattgatacttgggaaga 878  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272119 acctcaaagcagctcatgagggtgattgccaagacattcttcttgaaatgcaaaacttattttatcaagacctcgattctcatattgatacttgggaaga 55272020  T
Q  879 tgaagttgatcactacttggctcgtgctgtttatgaccatatgcatctaaatccagataataatactaataataaggcatctatctatct 968  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272019 tgaagttgatcactacttggctcgtgctgtttatgaccatatgcatctaaatccagataataatactaataataaggcatctatctatct 55271930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 26662428 - 26662597
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26662428 agtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 26662527  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26662528 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataac 26662597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 9106443 - 9106274
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  9106443 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 9106344  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  9106343 aatgaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 9106274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 9595870 - 9596039
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  9595870 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttattcaa 9595969  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9595970 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataac 9596039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 30947801 - 30947970
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  30947801 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgttcaa 30947900  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30947901 aatgaaagaaatttgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 30947970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 6097574 - 6097743
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6097574 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccttaaagtgagccaaaaccatttttgttcaa 6097673  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  6097674 aataaaagaaatctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 6097743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 46237648 - 46237817
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  46237648 agtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcatactcccccaaagtgagccaaaaccatttttattcaa 46237747  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  46237748 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 46237817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 33413902 - 33414072
Alignment:
Q  59 agtggttatggtgcataaggaaatcc-ttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttca 154  Q
    |||||||||||||||||||||||||| ||||||   ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || |    
T  33413902 agtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacaccctcaaagtgagccaaaaccatttttattta 33414001  T
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33414002 aaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 33414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 362 - 519
Target Start/End: Complemental strand, 55272544 - 55272385
Alignment:
Q  362 ttgggggaatgaatgaatagaagtgtgggaagtggaagctgcgatgcgatg-----gaggaaataggcacatcaacaacagcagtgaagaagaaggcgat 456  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||   |||||||||||||    
T  55272544 ttgggggaatgaatgaatagaagtgtgggaagtggaagctgcgatgcgatgcgatggaggaaataggcacatcaacaacagcag---agaagaaggcgat 55272448  T
Q  457 gttgcggccatctttaaaatccgattctgaattcaacaattaccaactctggaaacaaaaggt 519  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272447 gttgcggccgtctttaaaatccgattctgaattcaacaattaccaactctggaaacaaaaggt 55272385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 2941816 - 2941985
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||| |||||||||||||||||||||||||||   ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  2941816 agtgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaa 2941915  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  2941916 aataaaagaaatctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataac 2941985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 3475297 - 3475466
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||| |  ||||||||||||||| |||||||||||||    
T  3475297 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatctccaaagtgagccaaaatcatttttgttcaa 3475396  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3475397 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 3475466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 19284847 - 19284678
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| |||||    
T  19284847 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagtcaaaaccatttttattcaa 19284748  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  19284747 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 19284678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 54379338 - 54379170
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||    
T  54379338 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaatgtgagccaaa-ccatttttgttcaa 54379240  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  54379239 aataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 54379170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 10986528 - 10986359
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||| ||    
T  10986528 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacatcctcaaagtgagtcaaaaccatttttgtttaa 10986429  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || ||||||    
T  10986428 aataaaagaaatctgatggttatgatgtgtttatgcacggtgcataaggaaataacttatacatcataac 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 26960802 - 26960633
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||| ||||||   ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26960802 agtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 26960703  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||| |||||| |||| |||||||||||||||||||||||||||||  ||||| |||||||||    
T  26960702 aataaaagaaacctgatgattgtaatgtgtttatgcacggtgcataaggaaataacttatacaccataac 26960633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 47335218 - 47335039
Alignment:
Q  54 gcggtagtggttatggtgcataaggaaatcctt-----atgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccat 145  Q
    |||| ||||||||||||||||||||||||||||     ||||   ||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||    
T  47335218 gcgggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaatcat 47335119  T
Q  146 ttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  47335118 ttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 47335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 55272680 - 55272599
Alignment:
Q  240 gactaattttactaaacatttatgtccccaacaatcacttattcacctttatgtagttaatttttaactattatcctactag 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272680 gactaattttactaaacatttatgtccccaacaatcacttattcacctttatgtagttaatttttaactattatcctactag 55272599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 51846785 - 51846839
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataac 51846839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 50755234 - 50755163
Alignment:
Q  63 gttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 50755163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 19384382 - 19384454
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  19384382 ggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 19384454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 34563352 - 34563406
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataac 34563406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 41192355 - 41192409
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataac 41192409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 53595036 - 53594982
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  53595036 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatggcttatgca 53594982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 51361524 - 51361590
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccc 125  Q
    ||||||||||||||||||||||||||||   |||| |||||||| |||||||||||||| |||||||    
T  51361524 ggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacaccc 51361590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 51681999 - 51682054
Alignment:
Q  163 gaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||    
T  51681999 gaaatctgatggttgcgaagtgtttatgcagggtgcataaggaaatgacttatgca 51682054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 47728456 - 47728402
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||    
T  47728456 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgca 47728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 19385313 - 19385354
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19385313 aaatctgatggttgtgaagtgtttatgcacggtgcataagga 19385354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 51362436 - 51362477
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  51362436 aaatctgatggttgtgaagtgtttatgcacggtgcataagga 51362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 50754071 - 50754032
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  50754071 atctgatggttgtgaagtgtttatgcacggtgcataagga 50754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 52987650 - 52987689
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52987650 atctgatggttgtgaagtgtttatgcacggtgcataagga 52987689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 8719180 - 8719133
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 106  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||    
T  8719180 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 9071067 - 9071020
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 106  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||    
T  9071067 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 23755344 - 23755299
Alignment:
Q  173 ggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  23755344 ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgca 23755299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 31853198 - 31853157
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  31853198 cgtgcataaatcccaacataattgcttcctacaccttcaaag 31853157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 17620733 - 17620765
Alignment:
Q  58 tagtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||||    
T  17620733 tagtggttatggtgcataaggaaatccttatgc 17620765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 28299952 - 28300004
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||| ||||||| ||||||||||| ||| |||||||||||| ||||||||    
T  28299952 atctgatagttgtgaagtgtttatgcatggtacataaggaaatgacttatgca 28300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 7045300 - 7045358
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  |||||||||||||||    
T  7045300 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataac 7045358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 32233048 - 32233005
Alignment:
Q  175 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||    
T  32233048 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 32233005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 34562397 - 34562428
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  34562397 agtggttatggtgcataaggaaatccttatgc 34562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 37319458 - 37319512
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||  ||||| ||||||||||| |||||||||| ||||| ||||||||    
T  37319458 aaatctgatgaatgtgaagtgtttatgcagggtgcataagaaaatgacttatgca 37319512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 39099262 - 39099220
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaat 208  Q
    |||||||||||||||  | ||||||||||||||||||||||||    
T  39099262 atctgatggttgtgaaatatttatgcacggtgcataaggaaat 39099220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 16277417 - 16277450
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataa 202  Q
    |||||||||||| |||||||||||||||||||||    
T  16277417 tgatggttgtgaagtgtttatgcacggtgcataa 16277450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 23699390 - 23699341
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||    
T  23699390 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgca 23699341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 23717845 - 23717796
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||    
T  23717845 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgca 23717796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 23736301 - 23736252
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||    
T  23736301 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgca 23736252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 3e-75; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 19784447 - 19784278
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19784447 agtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacaccctcaaagtgagccaaaaccatttttgttcaa 19784348  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19784347 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 19784278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 34633211 - 34633380
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34633211 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacaccctcaaagtgagccaaaaccatttttgttcaa 34633310  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  34633311 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataac 34633380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 41451281 - 41451112
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  41451281 agtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaa 41451182  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41451181 aataaaagaaatctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 41451112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 41099361 - 41099189
Alignment:
Q  59 agtggttatggtgcataaggaaatc---cttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgtt 152  Q
    |||||||||||||||||||||||||   |||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41099361 agtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 41099262  T
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  41099261 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 41099189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 10237530 - 10237361
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  10237530 agtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaa 10237431  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10237430 aataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 10237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 1149913 - 1150082
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  1149913 agtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaa 1150012  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  1150013 aataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataac 1150082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 15227206 - 15227037
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||| ||||  || ||||||||||||||||||||||||||||    
T  15227206 agtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctacattcttaaagtgagccaaaaccatttttgttcaa 15227107  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  15227106 aataaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 15227037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 43690806 - 43690647
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaat 158  Q
    ||||||||||||||||||||||| |       ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  43690806 agtggttatggtgcataaggaaacc-------gtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaaaat 43690714  T
Q  159 gaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43690713 aaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 43690647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 30414090 - 30413921
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||| |||| |   | ||||||  ||||||||||||||||||    
T  30414090 agtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacatctctagagtgaggtaaaaccatttttgttcaa 30413991  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  30413990 aattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataac 30413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 7857821 - 7857687
Alignment:
Q  91 gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatg 190  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaattaaaaaaatctgatgattgtgatgtgtttatg 7857722  T
Q  191 cacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||| ||||||| |||||||||||||||||||||    
T  7857721 cacggcgcataagaaaatggcttatgcaccataac 7857687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 4835519 - 4835591
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  4835519 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4835591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 39657709 - 39657775
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccc 125  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||    
T  39657709 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccc 39657775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 1209827 - 1209758
Alignment:
Q  64 ttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaa 130  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 1209758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 9852331 - 9852277
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataac 9852277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 23396538 - 23396484
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  23396538 atggttgtaaagtgtttatgcacggtgcataaggaaatggcttatgcaccataac 23396484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 34648133 - 34648187
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataac 34648187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 2751278 - 2751207
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaa 130  Q
    |||||||||||||||| ||||||||||||   |||||| |||||||||||||||||||| ||||||| ||||    
T  2751278 ggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccccaaa 2751207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 4840974 - 4841036
Alignment:
Q  72 cataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4841036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 15260854 - 15260910
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||||||||||    
T  15260854 tgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataac 15260910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 13526669 - 13526723
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||    
T  13526669 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgca 13526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 13616204 - 13616258
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||    
T  13616204 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgca 13616258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 35302591 - 35302645
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||| ||||| | |||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataac 35302645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 40023279 - 40023321
Alignment:
Q  183 tgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  40023279 tgtttatgcacggtgtataaggaaatggcttatgcaccataac 40023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 40247288 - 40247337
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 40247337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 8550569 - 8550529
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaa 206  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8550569 atctgatggttgtgaagtgtttatgcacggtgcataaggaa 8550529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 32987445 - 32987484
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32987445 atctgatggttgtgaagtgtttatgcacggtgcataagga 32987484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 7059208 - 7059144
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacac 123  Q
    |||||||||||||||||||||| |||||   ||||||||||| |||||||||||| ||| |||||    
T  7059208 ggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 4836701 - 4836738
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataag 203  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4836701 atctgatggttgtgaagtgtttatgcacggtgcataag 4836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 4842146 - 4842183
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataag 203  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4842146 atctgatggttgtgaagtgtttatgcacggtgcataag 4842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 42433768 - 42433727
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  42433768 aaatctgatggttgtgaagtgcttatgcacggtgcataagga 42433727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 42434566 - 42434614
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatcccctt 235  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  42434566 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactcccctt 42434614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 10443586 - 10443622
Alignment:
Q  182 gtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10443586 gtgtttatgcagggtgcataaggaaatggcttatgca 10443622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 2522924 - 2522881
Alignment:
Q  175 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||    
T  2522924 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 2522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 7614133 - 7614094
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  7614133 atctgatggttgtgaagtgtttatgcatggtgcataagga 7614094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 12355488 - 12355437
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgc 217  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  12355488 atctaatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgc 12355437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 28698578 - 28698633
Alignment:
Q  164 aaatctgatggttgtgatgtgttta-tgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||||||||  |||||| |||| |||||||||| ||||||||||||||    
T  28698578 aaatctgatggttgtgaaatgtttaatgcagggtgcataagaaaatggcttatgca 28698633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 34647169 - 34647200
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  34647169 agtggttatggtgcataaggaaatccttatgc 34647200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 35301627 - 35301658
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  35301627 agtggttatggtgcataaggaaatccttatgc 35301658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 39022040 - 39022001
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  39022040 atctgatgattgtgaagtgtttatgcacggtgcataagga 39022001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 40022386 - 40022417
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  40022386 agtggttatggtgcataaggaaatccttatgc 40022417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 185880 - 185910
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  185880 gtggttatggtgcataaggaaatccttatgc 185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 30652009 - 30651963
Alignment:
Q  172 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  30652009 tggttgtgaagtgtttatgcagggtgcataaggaaatagattatgca 30651963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 7058175 - 7058142
Alignment:
Q  170 gatggttgtgatgtgtttatgcacggtgcataag 203  Q
    ||||||||||| ||||||||||||||||||||||    
T  7058175 gatggttgtgaagtgtttatgcacggtgcataag 7058142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 15181856 - 15181815
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaa 207  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    
T  15181856 atctgatgcttgtgaagtgtttatgcagggtgcataaggaaa 15181815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 15259856 - 15259903
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 106  Q
    |||||||| |||||||||||||||||||   |||||||||||||||||    
T  15259856 ggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 23397487 - 23397458
Alignment:
Q  61 tggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||    
T  23397487 tggttatggtgcataaggaaatccttatgc 23397458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 40004758 - 40004718
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  40004758 ttatgcacggtgcataaggaaat-ccttatgcaccataacca 40004718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 142; Significance: 5e-74; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 33858 - 33691
Alignment:
Q  61 tggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaa 157  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  33858 tggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaa 33759  T
Q  158 tgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33758 tgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 33691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 8e-73; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 11786150 - 11785981
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  11786150 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgttcaa 11786051  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11786050 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataac 11785981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 11798317 - 11798148
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  11798317 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaa 11798218  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11798217 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataac 11798148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 13635615 - 13635784
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||    
T  13635615 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttattcaa 13635714  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13635715 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 13635784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 49425947 - 49426116
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  49425947 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 49426046  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  49426047 aataaaagaaatttgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 49426116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 15051026 - 15051195
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  15051026 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 15051125  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15051126 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 15051195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 30597874 - 30597706
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaa 156  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||    
T  30597874 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccagagtgagccaaaatcatttttgttcaaa 30597775  T
Q  157 atgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30597774 ataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 30597706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 51921166 - 51921324
Alignment:
Q  70 tgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaa 166  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaa 51921265  T
Q  167 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  51921266 tctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 51921324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 27865627 - 27865796
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||| ||||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||    
T  27865627 agtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaattatttttgttcaa 27865726  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  27865727 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataac 27865796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 49492406 - 49492571
Alignment:
Q  63 gttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatg 159  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||| |  |||||||| ||||||||||||| |||||||||    
T  49492406 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacactcctaaagtgagtcaaaaccatttttattcaaaatg 49492505  T
Q  160 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49492506 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 49492571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 53441496 - 53441327
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   | |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  53441496 agtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 53441397  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  53441396 aataaaagaaatttgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataac 53441327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 46672614 - 46672446
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||| ||||||||||||| |||||||   |||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  46672614 agtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacaccc-caaagtgagccaaaactatttttgttcaa 46672516  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  46672515 aataaaataaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 46672446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 1622018 - 1621882
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctc-aaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgttta 188  Q
    |||||||||||||||||||||||||||| ||||||| | ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1622018 cgtgcataaatcccaacataattgcttcctacaccccccaaagttagtcaaaaccatttttgttcaaaattaaagaaatctgatggttgtgatgtgttta 1621919  T
Q  189 tgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||    
T  1621918 tgcacggtgcataaggaaatggcttatgcaccataac 1621882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 55765623 - 55765488
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttat 189  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  55765623 cgtgcataaatcccaatataattgcttcatatacccttaaagtgagtcaaaatcatttttgttcaaaatgaaagaaatctgatggttgtaatgtgtttat 55765524  T
Q  190 gcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||| |||||||||||||||    
T  55765523 gcacggtgcataaggaaatgacttatgcaccataac 55765488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 35291451 - 35291607
Alignment:
Q  72 cataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatc 168  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| ||| |||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaattgagccaaaactatttttgttcaaaataaaataaatc 35291550  T
Q  169 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  35291551 ttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 35291607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 36011985 - 36011850
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttat 189  Q
    |||| ||||||| ||||||||||||||| |||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  36011985 cgtgtataaatctcaacataattgcttcctacacccctaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttat 36011886  T
Q  190 gcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||  |||||||||||||||    
T  36011885 gcacggtgcataaggaaataacttatgcaccataac 36011850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 10472573 - 10472504
Alignment:
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  10472573 aatgaaagaaatctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataac 10472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 26578176 - 26578245
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccat 222  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  26578176 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccat 26578245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 38245023 - 38244951
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||    
T  38245023 caaaataaaagaaatctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataac 38244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 45256938 - 45256866
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  45256938 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 45256866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 639035 - 638965
Alignment:
Q  64 ttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 50644716 - 50644642
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaa 130  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| || |||| ||||    
T  50644716 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctatacccccaaa 50644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 1729615 - 1729674
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||    
T  1729615 atctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataac 1729674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 38010215 - 38010148
Alignment:
Q  158 tgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| ||||||  |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  38010215 tgaaggaaatcaaatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataac 38010148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 805148 - 805102
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  805148 ttatgcacggtgcataaggaaatggcttatgcaccataaccactccc 805102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 10473691 - 10473619
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||||||||||   ||||||||||| ||||| |||||||||| ||||||| |||||    
T  10473691 ggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacacccccaaag 10473619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 20861637 - 20861587
Alignment:
Q  175 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  20861637 ttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataac 20861587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 25574126 - 25574180
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  25574126 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 25574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 26577262 - 26577334
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||||||||||   |||||||||||  ||||||||||||||| ||||||| |||||    
T  26577262 ggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacacccccaaag 26577334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 30357868 - 30357814
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgaaccataac 30357814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 51836328 - 51836394
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccc 125  Q
    |||||||||||||||||||||  ||||||   ||||||||||||||||||||||||||| |||||||    
T  51836328 ggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacaccc 51836394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 16298989 - 16298935
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||    
T  16298989 aaatctgatggttgtgaagtgattatgcagggtgcataaggaaatgacttatgca 16298935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 24686634 - 24686586
Alignment:
Q  170 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  24686634 gatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 24686586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 4168423 - 4168384
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4168423 atctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 26447412 - 26447451
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26447412 atctgatggttgtgaagtgtttatgcacggtgcataagga 26447451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 36621701 - 36621740
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36621701 atctgatggttgtgaagtgtttatgcacggtgcataagga 36621740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 30358883 - 30358835
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 104  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||    
T  30358883 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 22181243 - 22181284
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  22181243 aaatctgatggttgtgaagtttttatgcacggtgcataagga 22181284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 29826604 - 29826645
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  29826604 aaatctgatggttgtgaagtgcttatgcacggtgcataagga 29826645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 50643810 - 50643769
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  50643810 aaatctgatggttatgaagtgtttatgcacggtgcataagga 50643769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 637919 - 637883
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataa 202  Q
    ||||||||||||||| |||||||||||||||||||||    
T  637919 atctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 55782641 - 55782688
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatcccct 234  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  55782641 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactcccct 55782688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 55846821 - 55846868
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatcccct 234  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  55846821 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactcccct 55846868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 22180207 - 22180252
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatccca 104  Q
    ||||||||||||||||||||||||||||   |||||||||||||||    
T  22180207 ggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 27764305 - 27764266
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  27764305 atctgatggttgcgaagtgtttatgcacggtgcataagga 27764266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 45256040 - 45256001
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  45256040 atctgatagttgtgaagtgtttatgcacggtgcataagga 45256001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 6385410 - 6385440
Alignment:
Q  101 cccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||||||    
T  6385410 cccaacataattgcttcatacaccctcaaag 6385440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 25715642 - 25715672
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  25715642 gtggttatggtgcataaggaaatccttatgc 25715672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 50070759 - 50070714
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  50070759 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactccc 50070714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 54895628 - 54895598
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  54895628 gtggttatggtgcataaggaaatccttatgc 54895598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 14499291 - 14499251
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  14499291 ttatgcacggtgcataaggaaat-ccttatgcaccataacca 14499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 8e-73; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 49936827 - 49936996
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  49936827 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 49936926  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49936927 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 49936996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 24636102 - 24635933
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24636102 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 24636003  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24636002 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 24635933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 20434612 - 20434781
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||| ||||||    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  20434612 agtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 20434711  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434712 aatgaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 20434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 25888919 - 25889087
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||||||||||||||| |||||||||   |||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  25888919 agtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 25889017  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25889018 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataac 25889087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 43452718 - 43452549
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  43452718 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgttcaa 43452619  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43452618 aataaaagaaatctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 43452549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 48762221 - 48762390
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  48762221 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaa 48762320  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  48762321 aataaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 48762390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 6314292 - 6314122
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccattttt-gttca 154  Q
    ||||||||||||||||||||||||||||||||   ||  ||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||    
T  6314292 agtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccattttttgttca 6314193  T
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6314192 aaatgaaagaaatttgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 6314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 19897650 - 19897819
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||    
T  19897650 agtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacacctccaaagtgagccaaaatcatttttgttcaa 19897749  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  19897750 aataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataac 19897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 16976131 - 16975961
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccattttt-gttca 154  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  16976131 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccattttttgttca 16976032  T
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| ||||||||    
T  16976031 aaataaaagaaatctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataac 16975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 18619006 - 18618842
Alignment:
Q  63 gttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatg 159  Q
    |||||||||||||||||| |||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||     
T  18619006 gttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaacaatttttgttcaaaata 18618908  T
Q  160 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  18618907 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataac 18618842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 50351945 - 50351810
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttat 189  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50351945 cgtgcataaatcccaacataattgcttcctacacccccaaagtgagccataaccatttttgttcaaaatgatagaaatctgatggttgtgatgtgtttat 50351846  T
Q  190 gcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||| |||||||||||||||    
T  50351845 gcacggtgcataaggaaatgacttatgcaccataac 50351810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28375567 - 28375471
Alignment:
Q  129 aagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||| |||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  28375567 aagtgagtcaaaactatttttgtttaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataac 28375471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 34369739 - 34369668
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataa 224  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  34369739 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataa 34369668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 4097895 - 4097967
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4097895 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataac 4097967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 23175509 - 23175581
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  23175509 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataac 23175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 11421671 - 11421601
Alignment:
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  11421671 aaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataac 11421601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 23817486 - 23817412
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaa 130  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||    
T  23817486 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 23817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 11422613 - 11422541
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||| |||||    
T  11422613 ggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacacccccaaag 11422541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 21256777 - 21256831
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataac 21256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 31529663 - 31529717
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  31529663 aaatctgatggttgtgaagtgtttatgcatggtgcataaggaaatggcttatgca 31529717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 23920972 - 23921043
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaa 130  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||||||| ||||    
T  23920972 ggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacccccaaa 23921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 23174403 - 23174475
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||| |||| |||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  23174403 ggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 23174475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 33097473 - 33097419
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  33097473 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 33097419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 37228364 - 37228405
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37228364 ttatgcacggtgcataaggaaatggcttatgcaccataacca 37228405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 37639407 - 37639355
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  37639407 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgca 37639355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 21641595 - 21641660
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacacc 124  Q
    ||||||| |||||||||||||||||||||   ||||| ||||||||||||||||||||| ||||||    
T  21641595 ggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacacc 21641660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 51801734 - 51801785
Alignment:
Q  167 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 51801785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 4097111 - 4097182
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||| ||||||| |||||    
T  4097111 ggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctacacccccaaag 4097182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 31083423 - 31083369
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||    
T  31083423 atggttgtgaagtgtttatgaatggtacataaggaaatggcttatgcaccataac 31083369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 41033946 - 41033992
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  41033946 ttatgcacggtgcataaggaaatgacttatgcaccataaccactccc 41033992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 44260586 - 44260536
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggctta 214  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  44260586 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgactta 44260536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 44688608 - 44688662
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||    
T  44688608 aaatctgatggttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgca 44688662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 35198181 - 35198233
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||    
T  35198181 atctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttatgca 35198233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 18056849 - 18056810
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  18056849 atctgatggttgtgaagtgtttatgcacggtgcataagga 18056810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 180896 - 180832
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacac 123  Q
    |||||||||| |||| |||||||||||||   ||| ||||||||||||||||||||||| |||||    
T  180896 ggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacac 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 20507286 - 20507340
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||  | |||||||||  ||||||||||||||||||||||||||||||    
T  20507286 atggttgtgaaatatttatgcacaatgcataaggaaatggcttatgcaccataac 20507340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 16115913 - 16115877
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16115913 tgatggttgtgaagtgtttatgcacggtgcataagga 16115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 17893071 - 17893101
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  17893071 gtggttatggtgcataaggaaatccttatgc 17893101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 21255838 - 21255886
Alignment:
Q  59 agtggttatggtgcataaggaaatccttat---gcgtgcataaatccca 104  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||    
T  21255838 agtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 31084448 - 31084418
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg 89  Q
    |||||||||||||||||||||||||||||||    
T  31084448 agtggttatggtgcataaggaaatccttatg 31084418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 32595328 - 32595298
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  32595328 gtggttatggtgcataaggaaatccttatgc 32595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 19861717 - 19861757
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  19861717 ttatgcacggtgcataaggaaat-ccttatgcaccataacca 19861757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 2e-70; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 1449718 - 1449549
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  1449718 agtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgttcaa 1449619  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1449618 aatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 1449549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 6900979 - 6900810
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6900979 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 6900880  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6900879 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 6900810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 7089258 - 7089089
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7089258 agtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 7089159  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  7089158 aataaaagaaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 7089089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 15493350 - 15493181
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15493350 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 15493251  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15493250 aataaaagaaatctaatggttatgatgtgtttatgcacggtacataaggaaatggcttatgcaccataac 15493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 31216836 - 31216669
Alignment:
Q  61 tggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaa 157  Q
    |||||||||||||||||||||| ||||||   |||| |||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  31216836 tggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaa 31216737  T
Q  158 tgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31216736 tgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 31216669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 1536820 - 1536955
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttat 189  Q
    |||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  1536820 cgtgcataaatcccaatataattgcttcctacacccccaaagcgagccaaaaccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttat 1536919  T
Q  190 gcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||  |||||||||||||||    
T  1536920 gcacggtgcataaggaaataacttatgcaccataac 1536955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 34870071 - 34870145
Alignment:
Q  151 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  34870071 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataac 34870145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 34869953 - 34870049
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgtt 152  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| ||||||  |||||||| |||||||||||||||||    
T  34869953 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaagtgaaccaaaaccatttttgtt 34870049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 30908713 - 30908659
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataac 30908659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 878433 - 878367
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccc 125  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||| |||||||    
T  878433 ggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacaccc 878367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 7764499 - 7764448
Alignment:
Q  174 gttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||||||||||    
T  7764499 gttgtgaagtgtttatacacggcgcataagaaaatggcttatgcaccataac 7764448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 35119300 - 35119261
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35119300 atctgatggttgtgaagtgtttatgcacggtgcataagga 35119261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 4338618 - 4338672
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||||||| || ||| ||||||||||| |||||||||| ||||||||||||||    
T  4338618 aaatctgatgattttgaagtgtttatgcagggtgcataagaaaatggcttatgca 4338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 16968021 - 16968075
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||| |||||||| ||| ||||||||||| |||||||||| ||||||||||||||    
T  16968021 aaatttgatggttatgaagtgtttatgcagggtgcataagaaaatggcttatgca 16968075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 18611254 - 18611202
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| |||||||||||  |||||||| |||||| ||||||||    
T  18611254 atctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgca 18611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 33346374 - 33346410
Alignment:
Q  169 tgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33346374 tgatggttgtgaagtgtttatgcacggtgcataagga 33346410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 7765450 - 7765419
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  7765450 agtggttatggtgcataaggaaatccttatgc 7765419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 18755661 - 18755692
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  18755661 agtggttatggtgcataaggaaatccttatgc 18755692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 24737691 - 24737726
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcata 201  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24737691 atctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 27079939 - 27079982
Alignment:
Q  175 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||    
T  27079939 ttgtgaagtgtttatgcacggtgcataagaaaatgacttatgca 27079982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 29157291 - 29157252
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29157291 atctgatggttgtaaagtgtttatgcacggtgcataagga 29157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 20522893 - 20522863
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  20522893 gtggttatggtgcataaggaaatccttatgc 20522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 30909485 - 30909437
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 104  Q
    |||||||||||||||||||||| ||||||||   |||||||||||||||    
T  30909485 agtggttatggtgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 28132783 - 28132823
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  28132783 ttatgcacggtgcataaggaaat-ccttatgcaccataacca 28132823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 35121530 - 35121490
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  35121530 cgtgcataaatcccaacataattgcttc-tacacccccaaag 35121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 2e-70; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 14940246 - 14940415
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14940246 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 14940345  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  14940346 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 14940415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 26637727 - 26637896
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26637727 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaa 26637826  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26637827 aattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataac 26637896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 37456856 - 37456687
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  37456856 agtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaactatttttgttcaa 37456757  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  37456756 aatgaaagaaatctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataac 37456687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 3883925 - 3884094
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  3883925 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaa 3884024  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  3884025 aatgaaagaaatttgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 3884094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 14394644 - 14394475
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  14394644 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttattcaa 14394545  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  14394544 aataaaagaaatctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataac 14394475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 15416840 - 15416671
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||| |||||||||||||||||||||   |||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||    
T  15416840 agtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacactcccaaagtgagccaaaaccatttttgttcaa 15416741  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15416740 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 15416671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 13553159 - 13552990
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||| |||||||| || ||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  13553159 agtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacaccttcaaagtgagccaaaatcatttttgttcaa 13553060  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  13553059 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 13552990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 30783516 - 30783442
Alignment:
Q  151 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  30783516 ttcaaaatgaaagaaatctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 30783442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 30783633 - 30783538
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgtt 152  Q
    |||||||||| |||||||||||||||||||||   |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  30783633 agtggttatgatgcataaggaaatccttatgcaccgtgcataaatcc-aacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 30783538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16668794 - 16668846
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  16668794 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgca 16668846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 16552637 - 16552691
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  16552637 aaatatgatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgca 16552691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 33868223 - 33868169
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  33868223 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 33868169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 4675025 - 4674978
Alignment:
Q  167 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggctta 214  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgactta 4674978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 13362835 - 13362796
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13362835 atctgatggttgtgaagtgtttatgcacggtgcataagga 13362796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 25017217 - 25017256
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  25017217 atctgatggttgtgaagtgtttatgcacggtgcataagga 25017256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 28069248 - 28069312
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacac 123  Q
    |||||||||| |||||||||||||||||   || |||||||| |||||||||||||||| |||||    
T  28069248 ggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacac 28069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 18465556 - 18465608
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||| ||||||||    
T  18465556 atctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgca 18465608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 34329192 - 34329156
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataa 202  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34329192 atctgatggttgtgaagtgtttatgcacggtgcataa 34329156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 28070153 - 28070192
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  28070153 atctgatagttgtgaagtgtttatgcacggtgcataagga 28070192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 42512264 - 42512225
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  42512264 atctgatggttgtgaagtgtttatgcacggtggataagga 42512225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 23155524 - 23155554
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatgc 90  Q
    |||||||||||||||||||||||||||||||    
T  23155524 gtggttatggtgcataaggaaatccttatgc 23155554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 25189862 - 25189817
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  25189862 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactccc 25189817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 25671333 - 25671304
Alignment:
Q  60 gtggttatggtgcataaggaaatccttatg 89  Q
    ||||||||||||||||||||||||||||||    
T  25671333 gtggttatggtgcataaggaaatccttatg 25671304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 34330198 - 34330157
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||| ||||||||||||||||||||| || |||||    
T  34330198 cgtgcataaattccaacataattgcttcatacatccccaaag 34330157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 5e-68; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 763873 - 763704
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||| |||||||    
T  763873 agtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaaccatttatgttcaa 763774  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  763773 aataaaagaaatctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 763704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 30884112 - 30884281
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30884112 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 30884211  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30884212 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 30884281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 46358696 - 46358527
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  46358696 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 46358597  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  46358596 aataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 46358527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 16933133 - 16933303
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctc-aaagtgagccaaaaccatttttgttca 154  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  16933133 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttca 16933232  T
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16933233 aaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 16933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 16938516 - 16938686
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctc-aaagtgagccaaaaccatttttgttca 154  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  16938516 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttca 16938615  T
Q  155 aaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16938616 aaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataac 16938686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 47340323 - 47340153
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  47340323 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 47340224  T
Q  156 aatgaaagaaatctgatggttgtgatgtg-tttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||    
T  47340223 aataaaagaaatctgatggttgtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataac 47340153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 31660245 - 31660076
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||    
T  31660245 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgaaccaaaaccatttttattcaa 31660146  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31660145 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 31660076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 41911002 - 41911168
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  41911002 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccctcaaagtgaaccaaaaccatttttgttcaa 41911101  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||   | |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  41911102 aat---aaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 41911168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 35737124 - 35736963
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  35737124 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccatttttgttcaa 35737025  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgc 217  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35737024 aataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgc 35736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 20000651 - 20000733
Alignment:
Q  143 catttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20000651 catttttgttcaaagtgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataac 20000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 48692093 - 48692028
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacacc 124  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||    
T  48692093 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 48692028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 32685845 - 32685917
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||||||||| |   ||||||||||| ||||||||||||||| |||||||||||||    
T  32685845 ggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacaccctcaaag 32685917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 34875557 - 34875503
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  34875557 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatggcttatgca 34875503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 46572575 - 46572647
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||    
T  46572575 ggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 46572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 11732645 - 11732706
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  11732645 aaatctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataac 11732706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 5757452 - 5757400
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  5757452 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgca 5757400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 24359932 - 24359878
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataac 24359878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 15973861 - 15973927
Alignment:
Q  62 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttcatacaccc 125  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||||| ||||||| |||||||    
T  15973861 ggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacaccc 15973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 39007647 - 39007701
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  39007647 aaatatgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 39007701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 44141249 - 44141303
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  44141249 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 44141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 46024092 - 46024053
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  46024092 atctgatggttgtgaagtgtttatgcacggtgcataagga 46024053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 47039971 - 47040006
Alignment:
Q  20 gtacccttctgacaagtcctttgtctgtttctctgc 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  47039971 gtacccttctgacaagtcctttgtctgtttctctgc 47040006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 15974934 - 15974975
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  15974934 aaatatgatggttgtgaagtgtttatgcacggtgcataagga 15974975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 34228603 - 34228654
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaaca 107  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||||||||    
T  34228603 agtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 30428938 - 30428899
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  30428938 atctgatggttgtgaaatgtttatgcacggtgcataagga 30428899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 33798779 - 33798748
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  33798779 agtggttatggtgcataaggaaatccttatgc 33798748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 48830645 - 48830614
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  48830645 agtggttatggtgcataaggaaatccttatgc 48830614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 25778904 - 25778844
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| |  |||||||||||||||    
T  25778904 aaatctgatggttgtgaagtgcttatgcacagtgcataa-gaattttcttatgcaccataac 25778844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 27335629 - 27335677
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttat 215  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| |||||    
T  27335629 atctgatggttgtgaagtgtttatgca-ggtgcataagaaaatgacttat 27335677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 5e-68; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 7487144 - 7487313
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||    
T  7487144 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttattcaa 7487243  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7487244 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataac 7487313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 8150007 - 8149838
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  8150007 agtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 8149908  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8149907 aataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataac 8149838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 8154631 - 8154462
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  8154631 agtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 8154532  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8154531 aataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataac 8154462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 15016456 - 15016625
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||||||||||||||||| |||||||   ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15016456 agtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaa 15016555  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15016556 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 15016625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 39355211 - 39355042
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||    
T  39355211 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaactatttttgttcaa 39355112  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  39355111 aataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 39355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 34464887 - 34464718
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    |||||||||||| |||||||||||||||||||   |||||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  34464887 agtggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaa 34464788  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  34464787 aataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataac 34464718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 1292069 - 1292238
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||    
T  1292069 agtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacccccaaaatgagcaaaaaccatttttgttcaa 1292168  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||    
T  1292169 aataaaagaaatctgatggttgtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataac 1292238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 9143726 - 9143592
Alignment:
Q  91 gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatg 190  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttgttcaaaataaaagaaatctgatgattgtgatgtgtttatg 9143627  T
Q  191 cacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||  |||||||||||||||    
T  9143626 cacggtgcataaggaaataacttatgcaccataac 9143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 2263652 - 2263580
Alignment:
Q  153 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  2263652 caaaatgaaataaatgcgatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataac 2263580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 18297169 - 18297241
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||    
T  18297169 ggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 18297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 18762928 - 18762874
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataac 18762874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 21155480 - 21155433
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatcccc 233  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  21155480 ttatgcacggtgcataaggaaatggcttatgcaccataaccactcccc 21155433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 27974291 - 27974337
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  27974291 ttatgcacggtgcataaggaaatggcttatgcaccataaccactccc 27974337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 28060820 - 28060866
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  28060820 ttatgcacggtgcataaggaaatggcttatgcaccataaccactccc 28060866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 5098784 - 5098730
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  5098784 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 5098730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 25194034 - 25193962
Alignment:
Q  62 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||| ||||||| ||| ||||||| |||||    
T  25194034 ggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacacccccaaag 25193962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 41346045 - 41346099
Alignment:
Q  171 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataac 41346099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 39548110 - 39548058
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatg 216  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  39548110 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatg 39548058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 18298111 - 18298150
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  18298111 atctgatggttgtgaagtgtttatgcacggtgcataagga 18298150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 16142073 - 16142127
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  16142073 aaatctaatggttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgca 16142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 25995354 - 25995300
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| || ||||||||  ||||||||||||||| ||||||||    
T  25995354 aaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttatgca 25995300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 40853685 - 40853731
Alignment:
Q  172 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataaggaaatggcttatgca 40853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 4578591 - 4578632
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  4578591 cgtgcataaatcccaacataattgcttcctacaccttcaaag 4578632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 18762975 - 18762928
Alignment:
Q  94 cataaatcccaacataattgcttcatacaccctcaaagtgagccaaaa 141  Q
    |||||||||||||||||||||||| |||||   |||||||||||||||    
T  18762975 cataaatcccaacataattgcttcctacacttccaaagtgagccaaaa 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 20709839 - 20709800
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  20709839 atctgatggttgtgaagtgtttatgcacggtggataagga 20709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 25192957 - 25192918
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  25192957 atctaatggttgtgaagtgtttatgcacggtgcataagga 25192918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 41345085 - 41345116
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc 90  Q
    ||||||||||||||||||||||||||||||||    
T  41345085 agtggttatggtgcataaggaaatccttatgc 41345116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 13081858 - 13081912
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||| ||||||||||| ||||||||| | ||||||||| |||||| ||||||||    
T  13081858 aaatcagatggttgtgaagtgtttatgtagggtgcataatgaaatgacttatgca 13081912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 36636935 - 36636989
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    ||||||||||||||||| ||||||||| | ||| |||||| ||||| ||||||||    
T  36636935 aaatctgatggttgtgaagtgtttatgtagggtacataagaaaatgacttatgca 36636989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 24450 - 24281
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaa 155  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  24450 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgaaccaaaaccatttttgttcaa 24351  T
Q  156 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    ||| |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24350 aatcaaagaaatttaatggttgtgatgtgtttatgcacggtacataaggaaatggcttatgcaccataac 24281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 116; Significance: 2e-58; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 8345 - 8480
Alignment:
Q  90 cgtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttat 189  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  8345 cgtgcataaatcccaacataattgctttctacaccctcaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttat 8444  T
Q  190 gcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  8445 gcacagtgcataaggaaatggcttatgcaccataac 8480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 75; Significance: 5e-34; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 661 - 735
Alignment:
Q  151 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  661 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 543 - 639
Alignment:
Q  59 agtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttcatacaccctcaaagtgagccaaaaccatttttgtt 152  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  543 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 6555 - 6484
Alignment:
Q  63 gttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttcatacaccctcaaag 131  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 25230 - 25271
Alignment:
Q  164 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  25230 aaatctgatggttgtgaagtgtttatgcacggtgcataagga 25271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 37483 - 37528
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  37483 ttatgcacggtgcataaggaaat-ccttatgcaccataaccaatccc 37528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 10675 - 10714
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  10675 atctgatggttgtgaagtgtttatgcacggtgtataagga 10714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 1661 - 1618
Alignment:
Q  175 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 218  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||    
T  1661 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 1618  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 13678 - 13639
Alignment:
Q  166 atctgatggttgtgatgtgtttatgcacggtgcataagga 205  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  13678 atctgatggttgtgaagtgtttatgcacggtggataagga 13639  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 20524 - 20479
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataaccaatccc 232  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  20524 ttatgcacggtgcataaggaaat-ccttatgcaccataaccactccc 20479  T

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Target: scaffold0455 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 10689 - 10729
Alignment:
Q  186 ttatgcacggtgcataaggaaatggcttatgcaccataacca 227  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  10689 ttatgcacggtgcataaggaaat-ccttatgcaccataacca 10729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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