View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16607_high_20 (Length: 270)
Name: NF16607_high_20
Description: NF16607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16607_high_20 |
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Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 7498942 - 7498689
Alignment:
| Q |
1 |
aatgaaattatgatatggtcactgaccctggtcaaattcaccatgagaaatccaatgttgttactcttcaatcgttttagttgctttttggtgactgtcg |
100 |
Q |
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| T |
7498942 |
aatgaaattatgatatggtcactgaccctggtcaaattcaccatgagaaatccaatgttgttactcttcaatcgttttagttgctttttggtgactgttg |
7498843 |
T |
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| Q |
101 |
aggtccaaccataacaattttcgaagtcatggtcactatcaaagatgttgtatgttttcagattcttggagttgtattcaatgcctgtaaagtatttaag |
200 |
Q |
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| T |
7498842 |
aggtccaaccataacaattttcgaagtcatggtcactatcaaagatgttgtatgttttcagattcttggagttgtattcaatgcctgtaaagtatttaag |
7498743 |
T |
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| Q |
201 |
aaatgaagcctccaattccaagacagtgctatgtttcttttctgaaactgcatg |
254 |
Q |
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| T |
7498742 |
aaatgaagcctccaattccaagacagtgctatgtttcttttctgaaactgcatg |
7498689 |
T |
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