View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16607_low_5 (Length: 527)
Name: NF16607_low_5
Description: NF16607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16607_low_5 |
 | |
|
| [»] scaffold0477 (2 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0477 (Bit Score: 306; Significance: 1e-172; HSPs: 2)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 4518 - 4879
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
4518 |
ctcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaaactatcggtatatctcccatatatgggag |
4617 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4618 |
actggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcgggagataaaggaatgaagatgaggcaaaagg |
4717 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4718 |
ccatggagttgaagaagaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatg |
4817 |
T |
|
| Q |
301 |
ctagactaaagtgatttattctatgaaacgtggttctgtgatttcctcttgaatttatttta |
362 |
Q |
| |
|
||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4818 |
ctagattaaagttatatattctatgaaacgtggttgtgtgatttcctcttgaatttatttta |
4879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 354 - 521
Target Start/End: Original strand, 5125 - 5293
Alignment:
| Q |
354 |
tttattttatggttaaaaaacgaagcatttagtgtgaggtgctaaacatatataaaatgtaagccatataagtgtgatttattatgtcatttgttggtgg |
453 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5125 |
tttattttatggttaaaaaacgatgcatttagtgtgaggtgctaaacatatataaa-tgtaagccatataagtgtgatttgttatgtcatttgttggtgg |
5223 |
T |
|
| Q |
454 |
tgtgattgaaaactatggttctaagt--tataactaatgcaatgtgaaattgtatatatattttcttgga |
521 |
Q |
| |
|
|| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
5224 |
tgcgattgaaaactatggttataagttatataactaatgcaatgtgaaattgtatatatattttgttgga |
5293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 153; Significance: 7e-81; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 2 - 445
Target Start/End: Complemental strand, 4622441 - 4622001
Alignment:
| Q |
2 |
tcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggaga |
101 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||| | || |||||||| |
|
|
| T |
4622441 |
tcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatatctgcaattcatgggaga |
4622342 |
T |
|
| Q |
102 |
ctggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggc |
201 |
Q |
| |
|
||| || ||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| |
|
|
| T |
4622341 |
ttggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctgatcaatgaattgatgtcgggagataaaggaaagaagatgagacaaaaggc |
4622242 |
T |
|
| Q |
202 |
catggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatgc |
301 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||||| ||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
4622241 |
catggagttgaaggagaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaaagttattaaggaggtcatgcttaaacaatac |
4622142 |
T |
|
| Q |
302 |
t-agactaaagtgatttattctatgaaacgtggttctgtgatttcctcttgaatttattttatggttaaaaaacgaagcat--ttagtgtgaggtgctaa |
398 |
Q |
| |
|
| | | ||||||| | | |||| |||||| ||| || | |||||||||||||||||| || |||||| || || ||||||||||||||| |
|
|
| T |
4622141 |
taaaattaaagtg------gccaggaaatgtggttgtgtcatcttctcttgaatttattttattgtcaaaaaaataatgatgcatagtgtgaggtgctag |
4622048 |
T |
|
| Q |
399 |
acatatataaaatgtaagccatataagtgtgatttattatgtcattt |
445 |
Q |
| |
|
|||| |||||| |||||||||||| ||| | |||||||||||||| |
|
|
| T |
4622047 |
ttatatttaaaatctaagccatataaatgtaacttattatgtcattt |
4622001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 4256443 - 4256841
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcag-ccaacaaactgtcagtatatctcctatatatggga |
99 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || |||||| |||||||||||| | ||| | |||||| |
|
|
| T |
4256443 |
ctcaaccattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatggga |
4256542 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| || ||||| |||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
4256543 |
gattggaattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattgatgtcgggagaaaaaggaaagaagatgaggcaaaag |
4256642 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaat |
299 |
Q |
| |
|
| |||||| |||||||||||| ||||| |||||||||| || ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4256643 |
gtcatggaattgaagaagaagacagagaagaacaccagcccagctggtcattcattgatgaacttggacaaagttattaaggaggtcatgcttaaacaat |
4256742 |
T |
|
| Q |
300 |
gctagactaaagtgatttattctatgaaacgtggttctgtgatttcctcttgaatttattttatggttaaaaa--acgaagcatttagtgtgaggtgct |
396 |
Q |
| |
|
||||| || ||| ||||||||||||||| |||||| ||| || ||||||||||||| |||||| || ||||| | || ||||||||||||||||||| |
|
|
| T |
4256743 |
actagattatagtaatttattctatgaaatgtggttgtgtaatctcctcttgaatttgttttattgtcaaaaaatatgatgcatttagtgtgaggtgct |
4256841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 4259986 - 4260298
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||||||||||||| ||||| | ||| ||||||||||||||||||||||| || |||||||||||||||||| | ||| | | ||||||| |
|
|
| T |
4259986 |
ctcaaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaacgaatgggag |
4260085 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| || |||||| |||||||||||| ||||| |||| |||| |||||||||||| | ||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
4260086 |
attggaattgaaattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatgaaattatgtcaggagaagaaggaaagaagatgaggcaaaagg |
4260185 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatg |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
4260186 |
tcatggagttgaagaggaaggcagaggagaacaccagtccatctggttattcattgatgaacttggacaaagttattaagcaggtcatgctcaaacaata |
4260285 |
T |
|
| Q |
301 |
ctagactaaagtg |
313 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
4260286 |
ctagattaaagtg |
4260298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4626251 - 4625953
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||| |||||| ||||||||||| ||| || |||||||||||||| ||| ||||| | | || ||||||| |
|
|
| T |
4626251 |
ctcaaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatgggag |
4626152 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| |||||||| ||| ||||||||| ||| ||| |||| ||| |||||||||| ||||||| |||||||||| |||| ||||||||||||||||| |
|
|
| T |
4626151 |
attggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatgcattgatggcaggagataacggaaagaagatgaggcaaaagg |
4626052 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaat |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||| ||| ||||||| || ||| |||||||||||| |
|
|
| T |
4626051 |
ccatggagttgaagaagaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaactgattaatgatgtcttgcttaaacaat |
4625953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4602089 - 4601792
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||| | ||| | || ||||||| |
|
|
| T |
4602089 |
ctcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggag |
4601990 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| |||||||||||| ||||| ||||||| ||||||| || | |||| |||||||||||| |||| | ||||||||||| | ||||||||||||||||| |
|
|
| T |
4601989 |
attggtatggaaatcgatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgaggcaaaagg |
4601890 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||||||||||||||| |||| |||||| ||| || | |||| |||||||||| |||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
4601889 |
ccatggagttgaagaagatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaaagttattaaggaggtgttgcttaaacaa |
4601792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 298
Target Start/End: Complemental strand, 4617321 - 4617025
Alignment:
| Q |
2 |
tcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggaga |
101 |
Q |
| |
|
||||||| |||||| ||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||| | ||| | || |||||||| |
|
|
| T |
4617321 |
tcaaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggaga |
4617222 |
T |
|
| Q |
102 |
ctggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggc |
201 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||||||| || | | || |||||||||||| |||| | ||||||||||||| ||| |||| ||||||||| |
|
|
| T |
4617221 |
ttggtatggaaatcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatgaagcaaaaggc |
4617122 |
T |
|
| Q |
202 |
catggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||| ||||||| |||||||| || ||||||||||| |
|
|
| T |
4617121 |
catggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaaagttattaaggatgtgttgcttaaacaa |
4617025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 2 - 445
Target Start/End: Original strand, 4266999 - 4267443
Alignment:
| Q |
2 |
tcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggaga |
101 |
Q |
| |
|
||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||||| | ||| | |||| |||||||| |
|
|
| T |
4266999 |
tcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatgggaga |
4267098 |
T |
|
| Q |
102 |
ctggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggc |
201 |
Q |
| |
|
||| | ||||| |||| ||||||| |||||| | || ||| | |||||||||||||| ||||| ||||||| | ||||| |||||| | |
|
|
| T |
4267099 |
ttggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaaaggaaatatgatgaagcaaaatgt |
4267198 |
T |
|
| Q |
202 |
catggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatgc |
301 |
Q |
| |
|
| |||||||||||| ||||||||| |||||||| || ||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
4267199 |
cttggagttgaagaggaaggcagaagagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaatac |
4267298 |
T |
|
| Q |
302 |
tagactaaagtgatttattctatgaaacgtggttctgtgatttcctcttgaatttattttatggttaaaaa--acgaagcatttagtgtgaggtgctaaa |
399 |
Q |
| |
|
|||| | |||| |||||||||| ||| || ||| ||| || ||||||||||||| |||||| || ||||| | || ||||||||||||||||||| |
|
|
| T |
4267299 |
tagattgaagtcatttattctaggaattgtagttgtgtaatctcctcttgaatttgttttattgtcaaaaaatatgatgcatttagtgtgaggtgcttgt |
4267398 |
T |
|
| Q |
400 |
catatataaaatgtaagccatataagtgtgatttattatgtcattt |
445 |
Q |
| |
|
|||| |||||| ||||||| | ||| ||||||||||||| |||| |
|
|
| T |
4267399 |
tatatttaaaataaaagccat-ttagtatgatttattatgtgattt |
4267443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 4613550 - 4613847
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||| | | || |||||| |
|
|
| T |
4613550 |
ctcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaactg-cagatatatatgcaatgaatggga |
4613648 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
| ||| ||||||||||| || ||||||| |||||| ||||| ||| ||| |||||||||||||| ||||| ||||||| ||| |||||||||||| |
|
|
| T |
4613649 |
aattgggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaatgaattgatggtgggagagaaaggaaagaaaatgaggcaaaag |
4613748 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|| || |||||||||||||||||||||||| |||| || || | || |||||||| |||||||||||||||||||| || ||||| |||| |||||| |
|
|
| T |
4613749 |
gcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaagtgatcaatgaggtgctgctgaaacaa |
4613847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4560806 - 4560509
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||| ||||||| ||||| | | || |||| || |
|
|
| T |
4560806 |
ctcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatggaag |
4560707 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| | ||||||||||| ||||| | ||| ||| | || ||| ||| |||||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
4560706 |
attggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgaggcaaaagg |
4560607 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||||| ||||||| ||||| |||| | |||| || ||| | || |||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4560606 |
ccatggagctgaagaaaaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggagaaagtgattaaggaggtgttgcttaaacaa |
4560509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 4516611 - 4516305
Alignment:
| Q |
11 |
gaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatgggagactggtatg |
109 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||||||||| || ||| ||||| | | || |||||||| ||| |
|
|
| T |
4516611 |
gaaagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattg-cagatatatttgcaatgaatgggagattggagca |
4516513 |
T |
|
| Q |
110 |
gaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagt |
209 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
4516512 |
gaaattgataccaatgtgaagagagaggaggtggagaagctgatcaatgaattaatggtgggagataaaggaaagaagatgaggcaaaaggccatggaat |
4516413 |
T |
|
| Q |
210 |
tgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatgctagactaa |
309 |
Q |
| |
|
|||||||||||||||||||| |||| || || |||| |||||||| |||||||||| ||||||||||||||||| |||| |||||| |||| ||| |
|
|
| T |
4516412 |
tgaagaagaaggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaaagtgattaaggaggtgctgctcaaacaaaattagattaa |
4516313 |
T |
|
| Q |
310 |
agtgattt |
317 |
Q |
| |
|
|||||||| |
|
|
| T |
4516312 |
agtgattt |
4516305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4574608 - 4574311
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||| |||||||||||||| | ||||||||| ||||||| ||| ||||| | | || |||||| |
|
|
| T |
4574608 |
ctcaaccactgaaagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactg-cagatatatttgcaatgaatggga |
4574510 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| | |||||| ||||||||||| | ||| ||| |||| ||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
4574509 |
gattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaa |
4574410 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||| ||| |||||||||||| |||| | |||| || ||| | || |||||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4574409 |
gccattgagctgaagaagaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaaagtgattaaggaggtgttgcttaaacaa |
4574311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4564011 - 4563714
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||||| ||| | | || ||||||| |
|
|
| T |
4564011 |
ctcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggag |
4563912 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| |||||||| ||||| ||||| | |||||| |||| ||| || |||||||||||||||||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
4563911 |
attgggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatgaattgatgtcaggagagaaaggaaagaagatgcggcaaaagg |
4563812 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
| || |||||||||||||| | ||||| ||||| || || | || ||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4563811 |
caattgagttgaagaagaaagtggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa |
4563714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 11 - 295
Target Start/End: Complemental strand, 4571262 - 4570978
Alignment:
| Q |
11 |
gaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggagactggtatgg |
110 |
Q |
| |
|
|||||||||| | | ||||| ||||||||||||| ||||||||| || ||||||||| |||||||| ||||||| | ||| |||||||| ||| || | |
|
|
| T |
4571262 |
gaaagcatatctactggagttccaatgttgtgttagccattttttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcg |
4571163 |
T |
|
| Q |
111 |
aaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagtt |
210 |
Q |
| |
|
|||| ||||||||||||| |||| | |||| |||| || |||||||||||||| ||||||||||||| |||||||||| |||| |||||| | |
|
|
| T |
4571162 |
aaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataatggagat |
4571063 |
T |
|
| Q |
211 |
gaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
|||||||||||| |||||| |||| || ||| |||| |||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
4571062 |
gaagaagaaggcggaggaggacacgagacctggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaa |
4570978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4585936 - 4585642
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtat-atctcctatatatggga |
99 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||| | || |||||||||||||||||| || || || | | || |||||| |
|
|
| T |
4585936 |
ctcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaaactgt-agaattatttgcaatgaatggga |
4585838 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| |||||| |||| || ||||||| ||||||| |||| ||| || |||||||||||||| ||||| || |||| |||||||||||||||| |
|
|
| T |
4585837 |
gattgggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaatgaattgatggtgggagagaatggaaagaagatgaggcaaaag |
4585738 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
|| || ||||||||||||||||| |||||| |||| || ||| | || ||||||||||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
4585737 |
gcaatcgagttgaagaagaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaaagtgattaaggaggttttgcttaaa |
4585642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4557425 - 4557128
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||| | | ||| |||||| |
|
|
| T |
4557425 |
ctcaaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactg-cagatatatttgcaatacatggga |
4557327 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| ||||||||||| || ||||||| |||||| ||||| |||| || |||||||||||||| || || ||||||| ||||||| || ||||| |
|
|
| T |
4557326 |
gattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatgaattgatggagggggagaaaggaaagaagatgtggaaaaag |
4557227 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|| ||| |||||| |||||| |||||| |||| || ||| |||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4557226 |
ataattgagatgaagacgaaggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaa |
4557128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4592531 - 4592237
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| |||||| |||||||| ||| | |||||||||||||||||||| || |||||||||||||||||| ||| | | || ||||||| |
|
|
| T |
4592531 |
ctcaaccactgaaagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggag |
4592432 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| |||||||||||||| ||||| | ||||||| |||| ||| || ||||||||||||||| ||||| ||||||| |||||||||| |||||| |
|
|
| T |
4592431 |
attgggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaagg |
4592332 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
| || ||||||||||||||||||||||||||||| || ||| | || |||||||| ||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
4592331 |
caatcgagttgaagaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
4592237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4480993 - 4480696
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtat-atctcctatatatggga |
99 |
Q |
| |
|
|||||||| |||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||| | ||| || || || || | | || |||||| |
|
|
| T |
4480993 |
ctcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggccattctttgccgatcagccacctaaccgt-agaattatttgcaatgaatggga |
4480895 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| | ||||| ||||| ||||||| |||||| | || || | |||||||||||| || ||||| ||||||| |||||||| ||||||| |
|
|
| T |
4480894 |
gattggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatcaatgaattgttggtgggagagaaaggaaagaagatgaagcaaaag |
4480795 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| || ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4480794 |
gccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgattaaggaggtcttgcttaaacaa |
4480696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 94 - 299
Target Start/End: Complemental strand, 3171948 - 3171743
Alignment:
| Q |
94 |
atgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgagg |
193 |
Q |
| |
|
|||| ||| ||| |||||||||||||| ||||| | ||||| | ||||| ||| |||||||| ||||||||| ||||| ||||||| |||||||||| |
|
|
| T |
3171948 |
atggaagattgggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgagg |
3171849 |
T |
|
| Q |
194 |
caaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctta |
293 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| | || || | |||| |||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
3171848 |
caaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgattaaggaggtcttgctta |
3171749 |
T |
|
| Q |
294 |
aacaat |
299 |
Q |
| |
|
|||||| |
|
|
| T |
3171748 |
aacaat |
3171743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 94 - 295
Target Start/End: Original strand, 4490280 - 4490481
Alignment:
| Q |
94 |
atgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgagg |
193 |
Q |
| |
|
|||||||| ||| ||| |||||||||| ||||| | |||||| ||||| ||| |||||||||||||||||| ||||| ||||||| |||||||||| |
|
|
| T |
4490280 |
atgggagattgggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgagg |
4490379 |
T |
|
| Q |
194 |
caaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgctta |
293 |
Q |
| |
|
|||||||| | |||||||||||||||||||| |||| |||| || | |||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4490380 |
caaaaggcgacggagttgaagaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgattaaggatgtcatgctta |
4490479 |
T |
|
| Q |
294 |
aa |
295 |
Q |
| |
|
|| |
|
|
| T |
4490480 |
aa |
4490481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 4504383 - 4504523
Alignment:
| Q |
155 |
aatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcat |
254 |
Q |
| |
|
|||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | | |||| ||||||| |
|
|
| T |
4504383 |
aatgaattgatggtgggagagaaaggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcat |
4504482 |
T |
|
| Q |
255 |
acatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4504483 |
acatgaacttggacaaagtgattaaggacgtcttgcttaaa |
4504523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 4579732 - 4579448
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
||||| || ||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||| ||| || ||| ||| ||| | | | ||| |||| | |
|
|
| T |
4579732 |
ctcaatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcgctgatcacccagtaagctg-cagatatttatgcaatacatggaa |
4579634 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
| ||| || ||||| || |||||||||| ||||||| |||| ||| ||| | |||||||||||| ||||| |||| || |||||||||||||||| |
|
|
| T |
4579633 |
aattggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaatgaattgatggtgggagagaaagcaaagaagatgaggcaaaag |
4579534 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggt |
285 |
Q |
| |
|
|| || |||||||||||||||| |||||| |||| || ||| | ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4579533 |
gcaattgagttgaagaagaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaaagtgattaaggaggt |
4579448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 4598471 - 4598187
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||| |||||| |||||||| ||||| |||||||||||||| || |||||||| ||||||| | | ||||| ||| ||||| | | || |||||| |
|
|
| T |
4598471 |
ctcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactg-cagatatatttgcaatgaatggga |
4598373 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| || ||||||| |||||||||| ||||||| |||| ||| ||| |||| ||||||||||| ||||||||||||| ||| |||||||||||| |
|
|
| T |
4598372 |
gattggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatgaggcaaaag |
4598273 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggt |
285 |
Q |
| |
|
| || || ||||||| |||||| |||||| | || || | | | || ||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
4598272 |
acaattgatttgaagatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaaagtgattaaggaggt |
4598187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 92 - 328
Target Start/End: Original strand, 4299669 - 4299899
Alignment:
| Q |
92 |
atatgggagactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatga |
191 |
Q |
| |
|
|||||||||| ||| || ||||| ||||| ||||||| ||||||| |||| || |||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
4299669 |
atatgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatga |
4299768 |
T |
|
| Q |
192 |
ggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgct |
291 |
Q |
| |
|
| |||||||| | |||||||||| |||||||||||||| | ||| |||| ||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
4299769 |
gacaaaaggcaagggagttgaag------gcagaggagaacactaatccaggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgct |
4299862 |
T |
|
| Q |
292 |
taaacaatgctagactaaagtgatttattctatgaaa |
328 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
4299863 |
taaacaatattagaataaagtgatttattctaggaaa |
4299899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 4506157 - 4505860
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| |||||||||||| || ||||| |||||| |||||||||| || || | ||||| |||||||||||| | ||| | | || || |||| |
|
|
| T |
4506157 |
ctcaaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggag |
4506058 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| || ||||||||||||||||||| ||||| || ||| ||| ||| || ||||| | ||| ||||| ||||||| ||||||||| |||||| |
|
|
| T |
4506057 |
attggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatgaaattatggttggagagaaaggaaacaagatgaggaaaaagg |
4505958 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||||||||| |||| |||| ||||| | || || ||| |||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
4505957 |
tcatggagttgaaaaagagggcaaaggaggatacaagacctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaa |
4505860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 282
Target Start/End: Complemental strand, 4568247 - 4568072
Alignment:
| Q |
110 |
gaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggagt |
209 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||| ||| ||||| |||||||| ||| ||| | ||||||| |||||||||||||||||| |||||| |
|
|
| T |
4568247 |
gaaattgatacaaatgtgaagagagaggaggtggagaagctgatgaatgaattaatggtgggacagaaaggaaaaaagatgaggcaaaaggccgtggagt |
4568148 |
T |
|
| Q |
210 |
tgaagaa---gaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaagga |
282 |
Q |
| |
|
||||||| |||||||||| || |||| || ||| ||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
4568147 |
tgaagaagaagaaggcagagaaggacacaagacctggtgattcttcatacatgaacttggacaaagtgattaagga |
4568072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 170 - 298
Target Start/End: Complemental strand, 4493086 - 4492958
Alignment:
| Q |
170 |
ggagataaaggaatgaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagt-cctcgtggctgttcatacatgaacttggac |
268 |
Q |
| |
|
||||| ||||||| ||||||||| ||| |||| ||||||||| ||||||||||||||| |||| ||| ||| |||| ||||||||||||||||||||| |
|
|
| T |
4493086 |
ggagagaaaggaaacaagatgaggagaaaagccacggagttgaaaaagaaggcagaggaggacac-agtacctggtggttgttcatacatgaacttggac |
4492988 |
T |
|
| Q |
269 |
aaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||| |
|
|
| T |
4492987 |
aaagtgatcaaggatgtcttgcttaaacaa |
4492958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 4514953 - 4515250
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||| |||||||| || ||||| |||||| | ||||||| ||| || | ||||| |||||||||||| | ||| | | || ||||||| |
|
|
| T |
4514953 |
ctcaaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatgggag |
4515052 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| || ||||| |||| ||||||| ||||||| |||| || || |||||||||||||| ||||| ||||||| || |||||| |||||| |
|
|
| T |
4515053 |
attgggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaattgatggtgggagagaaaggaaataaaatgaggaaaaagg |
4515152 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||||||||| ||||||||||| ||| |||| || | | | || | ||||||| ||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4515153 |
ttatggagttgaaaaagaaggcagacgaggacactagacttggcgggtcttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaa |
4515250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 298
Target Start/End: Complemental strand, 4461422 - 4461126
Alignment:
| Q |
2 |
tcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggaga |
101 |
Q |
| |
|
||||||| ||||||||||||||| ||||| || ||||||||||||||||| || | ||||||||| |||||||| | ||| | | | | |||||||| |
|
|
| T |
4461422 |
tcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttggtgatcagccagcaaactgtagatttatttgcaacaaatgggaga |
4461323 |
T |
|
| Q |
102 |
ctggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggc |
201 |
Q |
| |
|
||| | ||||| |||| |||||| ||| || |||| ||| || |||| ||||||||| ||||| | |||| ||||||||||||||||| |
|
|
| T |
4461322 |
ttggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaacgaattgatggttggagagattggaaagaagatgaggcaaaaggt |
4461223 |
T |
|
| Q |
202 |
catggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||| || |||||||||| |||||| | ||||| ||| | || |||||||| ||||||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
4461222 |
catggaattcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaacaa |
4461126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 4392052 - 4392154
Alignment:
| Q |
195 |
aaaaggccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaa |
294 |
Q |
| |
|
||||||| || |||||||||||||||||| ||||| |||| | ||| |||| | ||||| |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4392052 |
aaaaggcgatcgagttgaagaagaaggcaaaggaggacacatgacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaa |
4392151 |
T |
|
| Q |
295 |
aca |
297 |
Q |
| |
|
||| |
|
|
| T |
4392152 |
aca |
4392154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4470103 - 4469809
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| |||||||||||| || ||||| |||||||||||||||||||| || | ||||||| | |||| ||| | ||| | | || ||||||| |
|
|
| T |
4470103 |
ctcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggag |
4470004 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| | ||||| |||| |||||| |||||| |||| ||| || |||||||||||||| ||||| || |||| |||||||||| ||||| |
|
|
| T |
4470003 |
attggacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaatgaattgatggttggagagaatggaaagaagatgagggaaaaga |
4469904 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
||||||||| |||||||||| |||||| | ||||| ||| | || |||||||| ||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
4469903 |
tcatggagttcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaa |
4469809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 4457688 - 4457644
Alignment:
| Q |
248 |
tgttcatacatgaacttggacaaagtgattaaggaggtcatgctt |
292 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
4457688 |
tgttcatacttgaacttggacaaagtgactaaggaagtcatgctt |
4457644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 4606972 - 4607020
Alignment:
| Q |
250 |
ttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
4606972 |
ttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaa |
4607020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 4490203 - 4490249
Alignment:
| Q |
17 |
atatgtgcaggagtaccaatgttgtgttggccatttttcgccgatca |
63 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
4490203 |
atatgtgctggagtgccaatgttgtgttggccattttttgctgatca |
4490249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4504229 - 4504295
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagcca |
67 |
Q |
| |
|
|||||||| |||||| | ||||| ||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
4504229 |
ctcaaccactgaaagtgtttgtgctggagtgccaatgttgtgttggccatttttttctgatcagcca |
4504295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 4493240 - 4493180
Alignment:
| Q |
16 |
catatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgt |
76 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
4493240 |
catatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgt |
4493180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 6e-60; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 1674526 - 1674229
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| |||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||||||||||| | ||| | || |||| || |
|
|
| T |
1674526 |
ctcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaag |
1674427 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| |||||||||||||||||| ||||||| ||||||| | ||| || ||||||||||||||| ||||| || |||| |||||||||||||||| |
|
|
| T |
1674426 |
attggtatggaaattgatacgaatgtgaagagagagggtttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaagg |
1674327 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
1674326 |
ccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaa |
1674229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 20863675 - 20863972
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| || |||||||| |||||||| ||| || || | | | | |||||| |
|
|
| T |
20863675 |
ctcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactg-cagatacatttgcaacaaatggga |
20863773 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| || |||||||| || ||||| | ||||||| |||| || ||| | |||||||||||| ||||| ||||||| || ||||||||||||| |
|
|
| T |
20863774 |
gattgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgatggtgggagagaaaggaaggaggatgaggcaaaag |
20863873 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
| | |||||||||||||||||||||||| |||| || || || ||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20863874 |
acaaatgagttgaagaagaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaa |
20863972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 16686099 - 16686396
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcag-tatatctcctatatatggga |
99 |
Q |
| |
|
|||||||| |||||| |||| ||| ||||| ||||||||||||||||||||||| || ||||||||| |||| || ||| ||||| | | || |||||| |
|
|
| T |
16686099 |
ctcaaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaaatg-cagatatatttgcaatgaatggga |
16686197 |
T |
|
| Q |
100 |
gactggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaag |
199 |
Q |
| |
|
|| ||| ||||||||||| || ||||||| |||||| |||| ||| || |||||||||||||| ||||| ||||||| |||||||||| ||||| |
|
|
| T |
16686198 |
gattggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaag |
16686297 |
T |
|
| Q |
200 |
gccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
|| || || | | ||||| || || || | || ||| |||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
16686298 |
ataattgaactgcaaatgaaggtggacgaagacccgagacctggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaa |
16686396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 9 - 295
Target Start/End: Complemental strand, 3086712 - 3086426
Alignment:
| Q |
9 |
ttgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggagactggtat |
108 |
Q |
| |
|
|||||||| || ||| ||||| |||||||||||||||||||||| | ||||| |||| ||||||| ||||||| | |||||||||||| ||| || |
|
|
| T |
3086712 |
ttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggagatcaaccaataaactgtagatatatctgcaatatatgggagattggaat |
3086613 |
T |
|
| Q |
109 |
ggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggccatggag |
208 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||| | | ||| |
|
|
| T |
3086612 |
tgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtgggagataaaggaaagaagatgaggcaaaatgtcgcagag |
3086513 |
T |
|
| Q |
209 |
ttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
295 |
Q |
| |
|
|| |||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
3086512 |
ttaaagaagaaagcagaagagaacaccagtatcggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa |
3086426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 24103299 - 24102977
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||| || | ||||| |||||||||||| | ||| | |||| ||||||| |
|
|
| T |
24103299 |
ctcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatgggag |
24103200 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||| | ||||| ||||| ||||||| |||||| | || ||| | |||||||||||||| ||||| || |||| || ||||| |||||||| |
|
|
| T |
24103199 |
attggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaacggaaagacgatgaagcaaaagg |
24103100 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatg |
300 |
Q |
| |
|
| ||||||| |||||||||||||| |||||||| || || |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24103099 |
tcttggagttcaagaagaaggcagaagagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaatt |
24103000 |
T |
|
| Q |
301 |
ctagactaaagtgatttattcta |
323 |
Q |
| |
|
||||| |||||| |||||||||| |
|
|
| T |
24102999 |
ctagattaaagtcatttattcta |
24102977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 27999931 - 28000212
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||| || ||||| ||||||||||||||| ||||||| || |||||||||||||||||| | ||| | || |||| || |
|
|
| T |
27999931 |
ctcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaag |
28000030 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| ||||||||||||||||| ||||||| || |||| | | ||| || ||||||||||||||| ||||| || |||| |||||||||||||||| |
|
|
| T |
28000031 |
attggtatggaaattgatatgaatgtgaagatagaggatttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaagg |
28000130 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaagga |
282 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28000131 |
ccatggagttgaagaaaaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaagga |
28000212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 24109400 - 24109335
Alignment:
| Q |
380 |
atttagtgtgaggtgctaaacatatataaaatgtaagccatataagtgtgatttattatgtcattt |
445 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
24109400 |
atttagtgtgaggtgctggttatatttaaaatgtaagccatataagtatgacttattatgtgattt |
24109335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 24102955 - 24102888
Alignment:
| Q |
378 |
gcatttagtgtgaggtgctaaacatatataaaatgtaagccatataagtgtgatttattatgtcattt |
445 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||| |||||||||| ||| ||||||||| |||| |
|
|
| T |
24102955 |
gcatttagtgtgaggtgctagttctatttaaaatgtaaaccatataagtatgacttattatgtgattt |
24102888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 1281414 - 1281117
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||| ||||| | ||| | || |||| || |
|
|
| T |
1281414 |
ctcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaag |
1281315 |
T |
|
| Q |
101 |
actggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaagg |
200 |
Q |
| |
|
| |||||||||||| ||||| ||||||| ||||||| |||| | || |||||||||||||||| | || ||| |||||| ||| ||||| |||||| |
|
|
| T |
1281314 |
attggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaatgaattgatagccggggatgaaggaaagaatatgagagaaaagg |
1281215 |
T |
|
| Q |
201 |
ccatggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa |
298 |
Q |
| |
|
||||||| ||||||||| ||| ||||||||||| || || |||| ||||||||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
1281214 |
ccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaagtgattaaggaaatgttgcttaaacaa |
1281117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 3552 - 3850
Alignment:
| Q |
2 |
tcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgtcagtatatctcctatatatgggaga |
101 |
Q |
| |
|
||||||| |||||||||||| || |||||||||||| | ||||||||||| || | |||||||||||||||||| | ||| | | | |||||||| |
|
|
| T |
3552 |
tcaaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacgaatgggaga |
3651 |
T |
|
| Q |
102 |
ctggtatggaaattgatactaatgtgacgagagagaaggtaacgaatctgatcaatgaattgatgtcaggagataaaggaatgaagatgaggcaaaaggc |
201 |
Q |
| |
|
||| | ||||| |||| |||||| |||||| |||| ||| || |||||||||||| | ||||| ||||||| |||||||||||||||||| |
|
|
| T |
3652 |
ttggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatgaattgacggtgggagagaaaggaaagaagatgaggcaaaaggc |
3751 |
T |
|
| Q |
202 |
catggagttgaagaagaaggcagaggagaacaccagtcctcgtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaatg |
300 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| || || |||| |||||||||||||| |||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3752 |
cgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaagttattaaggaggttttgcttaaacaatg |
3850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3516 - 3591
Alignment:
| Q |
1 |
ctcaaccattgaaagcatatgtgcaggagtaccaatgttgtgttggccatttttcgccgatcagccaacaaactgt |
76 |
Q |
| |
|
|||||||||||||||||| ||| | ||||| |||||| || |||||||||||||| |||| || ||||||||||| |
|
|
| T |
3516 |
ctcaaccattgaaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaacaaactgt |
3591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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