View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16611_low_24 (Length: 262)
Name: NF16611_low_24
Description: NF16611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16611_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 47021194 - 47020945
Alignment:
| Q |
1 |
tacaaccatcaatgatcacaggtttttacaaaccatttcatcttaaggtaacatgttaaccacttgaaccaaatgatgtttataaagaatttaaaattac |
100 |
Q |
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| T |
47021194 |
tacaaccattaatgatcacaggtttttacaaaccatttaatcttaaggtaacatgttaaccacttgaaccaaatgatgttaataaagaatttaaaataac |
47021095 |
T |
|
| Q |
101 |
ttttttaaggaatctttaaaattacaattaaaaatgagatgagacaacattattattaaattaaagaaaacttatagtaaactgataaatatatccaatg |
200 |
Q |
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| T |
47021094 |
ttttttaaggaatctttaaaattacaattaaaaatgagatgagacaacattataattaaattaaagaaaacttatagtaatctgttaaatatatccaatg |
47020995 |
T |
|
| Q |
201 |
aaaaaacagtgacacctagatttaaaaatagttaaagtgtccttcatctc |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
47020994 |
aaaaaacagtgacacctagatttaaaaatagttaaagtttccttcatctc |
47020945 |
T |
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