View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16612_low_1 (Length: 703)

Name: NF16612_low_1
Description: NF16612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16612_low_1
NF16612_low_1
[»] chr8 (12 HSPs)
chr8 (360-689)||(38082673-38083004)
chr8 (362-690)||(8205800-8206129)
chr8 (362-690)||(22972829-22973164)
chr8 (626-689)||(8203956-8204017)
chr8 (626-689)||(8205689-8205750)
chr8 (21-121)||(9818235-9818334)
chr8 (21-121)||(9881085-9881185)
chr8 (626-689)||(22974313-22974374)
chr8 (21-128)||(21231906-21232012)
chr8 (626-689)||(22973214-22973274)
chr8 (17-121)||(24423221-24423324)
chr8 (626-689)||(38083887-38083948)
[»] scaffold0041 (2 HSPs)
scaffold0041 (361-689)||(65067-65396)
scaffold0041 (626-689)||(43227-43288)
[»] chr7 (15 HSPs)
chr7 (361-689)||(40907698-40908027)
chr7 (451-690)||(32257734-32257974)
chr7 (136-358)||(11036743-11036965)
chr7 (18-107)||(46002798-46002887)
chr7 (30-129)||(29587564-29587663)
chr7 (286-358)||(13163915-13163987)
chr7 (30-120)||(9745123-9745212)
chr7 (31-121)||(13167881-13167971)
chr7 (18-116)||(31211093-31211191)
chr7 (21-121)||(10530198-10530297)
chr7 (626-689)||(32257624-32257684)
chr7 (626-689)||(40906730-40906791)
chr7 (41-118)||(8311731-8311808)
chr7 (626-689)||(32256580-32256641)
chr7 (109-138)||(48576313-48576342)
[»] scaffold0645 (1 HSPs)
scaffold0645 (362-677)||(2186-2502)
[»] chr3 (12 HSPs)
chr3 (362-677)||(11560193-11560509)
chr3 (362-690)||(46044448-46044777)
chr3 (361-690)||(29532769-29533101)
chr3 (18-174)||(11650580-11650736)
chr3 (21-128)||(52641389-52641496)
chr3 (626-689)||(11537037-11537098)
chr3 (30-121)||(15990236-15990327)
chr3 (626-689)||(29532657-29532719)
chr3 (283-358)||(547672-547747)
chr3 (626-689)||(46042760-46042821)
chr3 (626-689)||(46044337-46044398)
chr3 (40-121)||(40888766-40888847)
[»] chr2 (9 HSPs)
chr2 (362-690)||(13432403-13432732)
chr2 (136-361)||(40729646-40729861)
chr2 (626-689)||(13434579-13434640)
chr2 (21-129)||(27977208-27977315)
chr2 (21-129)||(28063736-28063843)
chr2 (32-119)||(22403747-22403834)
chr2 (40-121)||(28497268-28497349)
chr2 (626-689)||(13432782-13432843)
chr2 (40-120)||(16131157-16131237)
[»] chr5 (6 HSPs)
chr5 (360-690)||(19880089-19880426)
chr5 (136-257)||(38984787-38984909)
chr5 (626-689)||(19879978-19880039)
chr5 (273-358)||(28201122-28201207)
chr5 (626-689)||(19878100-19878161)
chr5 (45-117)||(18927183-18927255)
[»] chr4 (5 HSPs)
chr4 (360-611)||(42808937-42809192)
chr4 (21-129)||(31519155-31519263)
chr4 (31-137)||(3295276-3295382)
chr4 (281-358)||(39882622-39882699)
chr4 (21-121)||(41943075-41943174)
[»] chr1 (9 HSPs)
chr1 (362-528)||(17751797-17751963)
chr1 (362-528)||(1533587-1533752)
chr1 (598-689)||(17751999-17752088)
chr1 (599-689)||(1533790-1533878)
chr1 (272-361)||(2269882-2269971)
chr1 (40-121)||(13380297-13380378)
chr1 (21-116)||(31654632-31654726)
chr1 (30-128)||(24304412-24304510)
chr1 (21-99)||(51443583-51443661)
[»] scaffold0259 (1 HSPs)
scaffold0259 (21-121)||(2560-2660)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-119)||(2023-2120)
[»] scaffold0248 (1 HSPs)
scaffold0248 (626-689)||(15579-15640)
[»] scaffold0007 (1 HSPs)
scaffold0007 (626-689)||(278332-278393)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-112)||(107863-107953)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 360 - 689
Target Start/End: Original strand, 38082673 - 38083004
Alignment:
Q  360 aaggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatg 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38082673 aaggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggataacagtaatccacaataaaaaatg 38082772  T
Q  460 gacgaggagatgggtttaagatattgacccggtatac-ttttgttattagcagattgacccattaattaa-ttttcnnnnnnnnnttcgagattattttc 557  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||          ||| |||||||||||    
T  38082773 gacgaggagatgggtttgatatattgacccggtatactttttgttattagcagattgacccattaattaatttttaaaaaaaaatttccagattattttc 38082872  T
Q  558 ttcttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatcc 657  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38082873 ttcttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatcc 38082972  T
Q  658 attcataatttgggaacaaaaattgattcatc 689  Q
    ||||||||||||||||||||||||||||||||    
T  38082973 attcataatttgggaacaaaaattgattcatc 38083004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 362 - 690
Target Start/End: Complemental strand, 8206129 - 8205800
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  8206129 ggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcgctataacatggacaacagtaatccacaataaaaaattga 8206030  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaatttt-cnnnnnnnnnttcgagattattttcttc 560  Q
    ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||           ||| ||||||||||||||    
T  8206029 cgaggagatgggtttgatatattgacccggtatacttttgttatcagcagattgacccattaattgattttaaaaaaaaaaattccagattattttcttc 8205930  T
Q  561 ttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 660  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8205929 ttctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaactatttcttccttcaatccatt 8205830  T
Q  661 cataatttgggaacaaaaattgattcatct 690  Q
    ||||||||||||||||||||||||||||||    
T  8205829 cataatttgggaacaaaaattgattcatct 8205800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 362 - 690
Target Start/End: Original strand, 22972829 - 22973164
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22972829 ggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 22972928  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-------nnnnnnnnnttcgagattatt 554  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||                ||| ||||||||    
T  22972929 cgaggagatgggtttgatatattgatccggtatacttttgttattagcatattgatccattaattaattttcaaaaaaaaaaaaaaaattccagattatt 22973028  T
Q  555 ttcttcttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaa 654  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22973029 ttcttcttctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaa 22973128  T
Q  655 tccattcataatttgggaacaaaaattgattcatct 690  Q
    | ||||||||||||||||||||||||||||||||||    
T  22973129 ttcattcataatttgggaacaaaaattgattcatct 22973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 8203956 - 8204017
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  8203956 tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 8204017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 8205750 - 8205689
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  8205750 tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 8205689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 9818235 - 9818334
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  9818235 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcatttaaa-catggtcaagactagagcccttacctt 9818333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 9881185 - 9881085
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| |||||||| | |||||||||||||| |  |||| || | ||||||||| || ||| |||| ||||||||||||||||||||||    
T  9881185 aatcttttcactcatccattgaatcgataagcatatcaaatttaagatcataatctattattttcattcaaaacatgatcaagactatagcccttacctt 9881086  T
Q  121 a 121  Q
    |    
T  9881085 a 9881085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 22974374 - 22974313
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||  | |||||||||||||||    
T  22974374 tttttcaacccaactatttcttccttcaatccattcgtaatttgg--aaaaaaattgattcatc 22974313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 21231906 - 21232012
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| |||||| || ||||||||||| |||| |||||||    
T  21231906 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcatttaaa-cacggtcaagactagagccattacctt 21232004  T
Q  121 atacgctt 128  Q
    | ||||||    
T  21232005 agacgctt 21232012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 22973214 - 22973274
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||  |||||||||||||||    
T  22973214 tttttcaacccaaccata-cttccttcaatccattcgtaatttggga--aaaaattgattcatc 22973274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 24423324 - 24423221
Alignment:
Q  17 cattaatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagccctta 116  Q
    |||||||||||| ||||||| | ||||| ||||||||||  ||||||| ||||| || | || ||||||  ||||||||||||||||||||  | |||||    
T  24423324 cattaatctcttcactcatccaatgaat-aagaagcatacaaaattcaatatcataaactatcattttcagttaaatcatggtcaagactagggtcctta 24423226  T
Q  117 cctta 121  Q
    |||||    
T  24423225 cctta 24423221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 38083948 - 38083887
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| |||| || ||||||||||||||||| ||||||||  | |||||||||||||||    
T  38083948 tttttcaacctaaccgttacttccttcaatccattcgtaatttgg--aaaaaaattgattcatc 38083887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 255; Significance: 1e-141; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 361 - 689
Target Start/End: Original strand, 65067 - 65396
Alignment:
Q  361 aggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgg 460  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  65067 aggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacagcagtaatccacaataaaaaatgg 65166  T
Q  461 acgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttctt 559  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||||          ||  |||||||||||||    
T  65167 acgaggagatgggtttgatatattgacccggtatacttttgttattagcagattaatccattaattaattttcaaaaaaaaattttcagattattttctt 65266  T
Q  560 cttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccat 659  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  65267 cttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttattccttcaatccat 65366  T
Q  660 tcataatttgggaacaaaaattgattcatc 689  Q
    ||||||||||||||||||||||||||||||    
T  65367 tcataatttgggaacaaaaattgattcatc 65396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 43288 - 43227
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  43288 tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 43227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 255; Significance: 1e-141; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 361 - 689
Target Start/End: Complemental strand, 40908027 - 40907698
Alignment:
Q  361 aggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgg 460  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40908027 aggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacagcagtaatccacaataaaaaatgg 40907928  T
Q  461 acgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttctt 559  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||||          ||  |||||||||||||    
T  40907927 acgaggagatgggtttgatatattgacccggtatacttttgttattagcagattaatccattaattaattttcaaaaaaaaattttcagattattttctt 40907828  T
Q  560 cttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccat 659  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40907827 cttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttattccttcaatccat 40907728  T
Q  660 tcataatttgggaacaaaaattgattcatc 689  Q
    ||||||||||||||||||||||||||||||    
T  40907727 tcataatttgggaacaaaaattgattcatc 40907698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 451 - 690
Target Start/End: Complemental strand, 32257974 - 32257734
Alignment:
Q  451 taaaaaatggacgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttcnnnnnnnnn-ttcgaga 549  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||            ||| |||    
T  32257974 taaaaaatggacgaggagatgggtttgatatattgacccggtaaacttttgttattagcagattgacccattaattaatttaaaaaaaaaaaattccaga 32257875  T
Q  550 ttattttcttcttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttcc 649  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32257874 ttattttcttcttctacataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttcc 32257775  T
Q  650 ttcaatccattcataatttgggaacaaaaattgattcatct 690  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32257774 ttcaatccattcataatttgggaacaaaaattgattcatct 32257734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 11036743 - 11036965
Alignment:
Q  136 taatccacaactttagcctcaaactcgcagctaccatacaaacacgatttctccggctctgagcattattttgaagattgaacctttgaaatcaaggaga 235  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||| |||||||| || ||||||||||||||||||    
T  11036743 taatccacaactctagcctcaaactcgcagctacgatacagacacaatttctcccgctctgagcattatattgaagatggagcctttgaaatcaaggaga 11036842  T
Q  236 accaagtggtgaaatcgtggagaatttcttagaactcccacgggatactcacaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaa 335  Q
    |||||  ||| |||||||| ||||||| ||||||||| ||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||||    
T  11036843 accaaccggtaaaatcgtgaagaatttgttagaactctcacaggatactcacaaaggaagaggagcacaagcttcaaagaaaataatgctagaattagaa 11036942  T
Q  336 attggagtatgaaaataattaag 358  Q
    |||||| |||||||| |||||||    
T  11036943 attggaatatgaaaacaattaag 11036965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 46002798 - 46002887
Alignment:
Q  18 attaatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagacta 107  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||    
T  46002798 attaatcttttcactcatccattgaatcaagaagcatatcaaattcaatatcacaacctattattttcatttaaatcatgatcaagacta 46002887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 29587663 - 29587564
Alignment:
Q  30 actcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttaccttatacgcttt 129  Q
    ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| || |||||||||||||||||| ||||||||||||| |||||||    
T  29587663 actcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcattcaaatcatggtcaagactagagcccttaccttagacgcttt 29587564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 13163915 - 13163987
Alignment:
Q  286 acaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaaattggagtatgaaaataattaag 358  Q
    ||||||||| ||||||  |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  13163915 acaaaggaagaggagcacaagcttcaaagaaaataatgctagacttagaaattggaatatgaaaacaattaag 13163987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 9745212 - 9745123
Alignment:
Q  30 actcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||||| |||||||||||||||||||||||||||  |||| || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  9745212 actcatccattgaatcaagaagcatatcaaattcaacatcataatctatcattttcctttaaa-catggtcaagactagagcccttacctt 9745123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 13167971 - 13167881
Alignment:
Q  31 ctcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctta 121  Q
    |||||| ||| |||||||||||||||||||||||  |||| || | || ||||||  |||||||||||||||||||| |||||||||||||    
T  13167971 ctcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcacttaaatcatggtcaagactagagcccttacctta 13167881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 31211191 - 31211093
Alignment:
Q  18 attaatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagccctta 116  Q
    ||||||||||| || |||| ||| ||||||||||||||||||||| | ||||| |||| ||||||||| | || |||||| ||||||||| ||||||||    
T  31211191 attaatctcttcacgcatctattaaatcaagaagcatatcaaatttaatatcataacctattattttcatctagatcatgatcaagactagagccctta 31211093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 10530198 - 10530297
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  10530198 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcatttaaa-catggtcaagactagagcccttacctt 10530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 32257684 - 32257624
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||   |||||||||||||||    
T  32257684 tttttcaacccaaccattacttccttcaatccattcgtaatttggg---aaaaattgattcatc 32257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 40906730 - 40906791
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  40906730 tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 40906791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 8311808 - 8311731
Alignment:
Q  41 gaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacc 118  Q
    |||||||||||||| |||||||||  |||| || | |||||||||  |||||||||||||||||||| ||| ||||||    
T  8311808 gaatcaagaagcatgtcaaattcaacatcataatctattattttcagttaaatcatggtcaagactagagcacttacc 8311731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 32256580 - 32256641
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| |||||||||||| |||| ||||||| ||  |||||||||||||||    
T  32256580 tttttcaacctaaccattacttccttcaatctattcgtaatttgcga--aaaaattgattcatc 32256641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Complemental strand, 48576342 - 48576313
Alignment:
Q  109 agcccttaccttatacgctttattccttaa 138  Q
    ||||||||||||||||||||||||||||||    
T  48576342 agcccttaccttatacgctttattccttaa 48576313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 250; Significance: 1e-138; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 362 - 677
Target Start/End: Original strand, 2186 - 2502
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2186 ggttttttctaaattaccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 2285  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttcttc 560  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||          ||| |||| |||||||||    
T  2286 cgaggagatgggtttgatatattgaccaggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaattctagataattttcttc 2385  T
Q  561 ttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 660  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386 ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 2485  T
Q  661 cataatttgggaacaaa 677  Q
    |||||||||||||||||    
T  2486 cataatttgggaacaaa 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 250; Significance: 1e-138; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 362 - 677
Target Start/End: Complemental strand, 11560509 - 11560193
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11560509 ggttttttctaaattaccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 11560410  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttcttc 560  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||          ||| |||| |||||||||    
T  11560409 cgaggagatgggtttgatatattgaccaggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaattctagataattttcttc 11560310  T
Q  561 ttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 660  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11560309 ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 11560210  T
Q  661 cataatttgggaacaaa 677  Q
    |||||||||||||||||    
T  11560209 cataatttgggaacaaa 11560193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 362 - 690
Target Start/End: Complemental strand, 46044777 - 46044448
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  46044777 ggttttttctaacttgccttgggaaagaggtgggtaaactgcccatcttgacgtggcagcactataatatggacaacaataatccacaataaaaaatgga 46044678  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttcttc 560  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||           || |||||||||||||     
T  46044677 cgaggagatgagtttgatatattgacccggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaaatccagattattttctta 46044578  T
Q  561 ttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 660  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46044577 ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 46044478  T
Q  661 cataatttgggaacaaaaattgattcatct 690  Q
    ||||||||||||||||||||||||||||||    
T  46044477 cataatttgggaacaaaaattgattcatct 46044448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 361 - 690
Target Start/End: Complemental strand, 29533101 - 29532769
Alignment:
Q  361 aggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgg 460  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  29533101 aggttttttctaaattaccttgggaaagaggtgggtaaactgcctatcttgacgtgacatcactataacatggacaacagtaatccacaatataaaatgg 29533002  T
Q  461 acgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaa-ttttcnnnnnnnnnttcgagattattttctt 559  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||          ||| |||||||||||||    
T  29533001 acgaggagatgggtttgatatattgacccggtatacttttgttattagcagattgacccattaattaatttttaaaaagaaatttccagattattttctt 29532902  T
Q  560 ct--tctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatcc 657  Q
    ||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29532901 cttctctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaatccaaccatttcttccttcaatcc 29532802  T
Q  658 attcataatttgggaacaaaaattgattcatct 690  Q
    |||||||||||||||||||||||||||||||||    
T  29532801 attcataatttgggaacaaaaattgattcatct 29532769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 11650580 - 11650736
Alignment:
Q  18 attaatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttac 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11650580 attaatgtcttaactcatcaattgaatcaagaagcatatcaaattcaatatcacaaccaattattttcttttaaatcatggttaagactatagcccttac 11650679  T
Q  118 cttatacgctttattccttaatccacaactttagcctcaaactcgcagctaccatac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11650680 cttatatgctttattccttaatccacaactttagcctcaaactcgcagctacgatac 11650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 52641389 - 52641496
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||||| |||||||||||||||||||||  |||| || | || ||||||  ||||||||||||||| |||| ||||||||||||    
T  52641389 aatcttttcactcatccattgagtcaagaagcatatcaaattcaacatcataatctatcattttcaattaaatcatggtcaaaactagagcccttacctt 52641488  T
Q  121 atacgctt 128  Q
    ||| ||||    
T  52641489 ataagctt 52641496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 11537037 - 11537098
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  11537037 tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 11537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 15990236 - 15990327
Alignment:
Q  30 actcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctta 121  Q
    ||||||| ||| |||||||||||||||||||||||   ||| || | || ||||||  |||||||||||||||||||| |||||||||||||    
T  15990236 actcatccattaaatcaagaagcatatcaaattcaacgtcataatctatcattttcagttaaatcatggtcaagactagagcccttacctta 15990327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 29532719 - 29532657
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  29532719 tttttcaacccaaccattacttccttcaatccattcgtaatttgggaa-aaaaaatgattcatc 29532657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 547672 - 547747
Alignment:
Q  283 ctcacaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaaattggagtatgaaaataattaag 358  Q
    ||||||||||||||||| |  ||||| ||||||||||||| |||  |||| | |||||||||||||||||||||||    
T  547672 ctcacaaaggaaaaggaacacaagctacaaagaaaataatcctaaacttaaagattggagtatgaaaataattaag 547747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 46042760 - 46042821
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| |||||||||||| |||| ||||||||||  |||||||||||||||    
T  46042760 tttttcaacctaaccattacttccttcaatctattcgtaatttggga--aaaaattgattcatc 46042821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 46044398 - 46044337
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    ||||||||||||| |||| ||||||||||||||||  ||||||||  | |||||||||||||||    
T  46044398 tttttcaacccaatcattacttccttcaatccatttgtaatttgg--aaaaaaattgattcatc 46044337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 40888766 - 40888847
Alignment:
Q  40 tgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctta 121  Q
    ||||||||||||||||| |||||||   ||| || | || ||||||  ||||||||||| ||||||||  ||||||||||||    
T  40888766 tgaatcaagaagcatattaaattcaacgtcataatctatcattttcaattaaatcatggccaagactagggcccttacctta 40888847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 362 - 690
Target Start/End: Original strand, 13432403 - 13432732
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13432403 ggttttttctaaattgtcttgggaaagaggtgggtaaactgctcatcttaacgtggcatcactataacatggacaacagtaattcacaataaaaaatgga 13432502  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaa-ttttcnnnnnnnnnttcgagattattttcttc 560  Q
    |||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||||| ||||          ||| | ||||||||||||    
T  13432503 cgaggagatgagtttgatatattgacccagtatacttttgttattagcagattgacccattaattaatttttaaaaaaaaaattccaaattattttcttc 13432602  T
Q  561 ttctgcataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt 660  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13432603 ttctgcataactgttttcttcttcaatatcaaataactgctttcttcttctacgttttcttttagtttttcaatccaaccatttcttccttcaatccatt 13432702  T
Q  661 cataatttgggaacaaaaattgattcatct 690  Q
    ||||||||||||||||||||||||||||||    
T  13432703 cataatttgggaacaaaaattgattcatct 13432732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 136 - 361
Target Start/End: Original strand, 40729646 - 40729861
Alignment:
Q  136 taatccacaactttagcctcaaactcgcagctaccatacaaacacgatttctccggctctgagcattattttgaagattgaacctttgaaatcaaggaga 235  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||||||||    
T  40729646 taatccacaactttagcctcaaactcgcagttacgatacagacacgatctctcccgtactgagcattatttcgaagattgaacctttgaaatcaaggaga 40729745  T
Q  236 accaagtggtgaaatcgtggagaatttcttagaactcccacgggatactcacaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaa 335  Q
    |||||||||||||||| |||||  ||       ||||||||| |||||||||||||| || |||||  |||||||||||||||||||||||| |||||||    
T  40729746 accaagtggtgaaatcatggag--tt-------actcccacgagatactcacaaagg-aacggagcacaagcttcaaagaaaataatgctagacttagaa 40729835  T
Q  336 attggagtatgaaaataattaagaaa 361  Q
    ||||| ||||||||||||||||||||    
T  40729836 attggggtatgaaaataattaagaaa 40729861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 13434640 - 13434579
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  13434640 tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 13434579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 27977208 - 27977315
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| |||||| |||||| ||||||| ||||||||||||    
T  27977208 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcatttaaa-catggttaagactagagcccttacctt 27977306  T
Q  121 atacgcttt 129  Q
    | |||||||    
T  27977307 agacgcttt 27977315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 28063736 - 28063843
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| |||||| |||||| ||||||| ||||||||||||    
T  28063736 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcatttaaa-catggttaagactagagcccttacctt 28063834  T
Q  121 atacgcttt 129  Q
    | |||||||    
T  28063835 agacgcttt 28063843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 22403834 - 22403747
Alignment:
Q  32 tcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacct 119  Q
    ||||| || ||||||||||||||||||||||||  |||| || | |||||||||  |||||||||||| ||||||| |||||||||||    
T  22403834 tcatccatcgaatcaagaagcatatcaaattcaacatcataatctattattttcagttaaatcatggtaaagactagagcccttacct 22403747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 28497268 - 28497349
Alignment:
Q  40 tgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctta 121  Q
    ||||||||||||||| || ||||||  |||| |||| || ||||||  |||||||||||||||||||| |||||||||||||    
T  28497268 tgaatcaagaagcatgtcgaattcaacatcataacctatcattttcaattaaatcatggtcaagactagagcccttacctta 28497349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 13432782 - 13432843
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||    
T  13432782 tttttcaacccaaccattacttccttcaatccattcgtaatttggta--aaaaattgattcatc 13432843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 16131157 - 16131237
Alignment:
Q  40 tgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||||||||||||| || ||||||| |||| |||| || ||||||  ||||| |||||||||||||| ||||||||||||    
T  16131157 tgaatcaagaagcatgtcgaattcagcatcataacctatcattttcaattaaaccatggtcaagactagagcccttacctt 16131237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 360 - 690
Target Start/End: Complemental strand, 19880426 - 19880089
Alignment:
Q  360 aaggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatg 459  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19880426 aaggttttttctaacttgccttgggaatgaggtgggtaaaccgccaatcttgacgtggcatcactataacatggacaacagcaatctacaataaaaaatg 19880327  T
Q  460 gacgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaattttc-nnnnnnnnnttcgagattattttct 558  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| ||||          ||| ||||||||||||    
T  19880326 gacgaggagatgggtttgatatattgacccagtatacttttgttattagcagattgacccattaattaaatttcaaaaaaaaaattccagattattttct 19880227  T
Q  559 tcttctgc------ataactgctttcttctccaatatcaaatagctgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttc 652  Q
    ||||||||      |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19880226 tcttctgcataactataactgctttcttctccaatatcaaataattgctttcttcttctaccttttcttttagtttttcaacccaaccatttcttccttc 19880127  T
Q  653 aatccattcataatttgggaacaaaaattgattcatct 690  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19880126 aatccattcataatttgggaacaaaaattgattcatct 19880089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 38984787 - 38984909
Alignment:
Q  136 taatccacaactttagcctc-aaactcgcagctaccatacaaacacgatttctccggctctgagcattattttgaagattgaacctttgaaatcaaggag 234  Q
    |||||||||||| ||||| | ||||| |||||||| ||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  38984787 taatccacaactctagcccccaaacttgcagctacgatacccacacgatttctcccgctctgagcattattttgaagatagaacctttgaaatcaaggag 38984886  T
Q  235 aaccaagtggtgaaatcgtggag 257  Q
     ||||||||||||||||||||||    
T  38984887 gaccaagtggtgaaatcgtggag 38984909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 19880039 - 19879978
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  19880039 tttttcaacccaaccattgcttccttcaatccattcgtaatttggga--aaaaattgattcatc 19879978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 28201207 - 28201122
Alignment:
Q  273 ccacgggatactcacaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaaattggagtatgaaaataattaag 358  Q
    ||||| ||||||||||||| ||||||| |  ||||| |||| |||||||| |||  ||||||||||||||| ||||||||||||||    
T  28201207 ccacgagatactcacaaagaaaaaggaacacaagctacaaataaaataatcctaaacttagaaattggagtgtgaaaataattaag 28201122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 19878100 - 19878161
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  19878100 tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcatc 19878161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 18927183 - 18927255
Alignment:
Q  45 caagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttac 117  Q
    ||||||||||||||||||||   ||| |||| ||||||||| | ||||| ||||||||||| | |||||||||    
T  18927183 caagaagcatatcaaattcaacttcataacctattattttcatctaaataatggtcaagacaagagcccttac 18927255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 360 - 611
Target Start/End: Original strand, 42808937 - 42809192
Alignment:
Q  360 aaggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatg 459  Q
    |||||||||||||| |||| |||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  42808937 aaggttttttctaacttgctttgggaaagaggtgggtaaattacccatcttgaggtggcatcactataacatggacaactgtaatccacaataaaaaatg 42809036  T
Q  460 gacgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaatt----ttcnnnnnnnnnttcgagattattt 555  Q
    ||| ||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||||||| |                ||| |||||||||    
T  42809037 gactaggagatggatttgatatattgacctggtatacttttgttattagcagattgacccattaattaactaaaaaaaaataaaaaattccagattattt 42809136  T
Q  556 tcttcttctgcataactgctttcttctccaatatcaaatagctgctttcttcttct 611  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42809137 tcttcttctgcataactgctttcttctccaatatcaaataaccgctttcttcttct 42809192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 31519155 - 31519263
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||||| |||||||||||||||||||||   ||| |||| || ||||||  |||||||||||||||||||| |||| |||||||    
T  31519155 aatcttttcactcatctattgagtcaagaagcatatcaaattcaacgtcataacctatcattttcaattaaatcatggtcaagactagagcctttacctt 31519254  T
Q  121 atacgcttt 129  Q
      |||||||    
T  31519255 ggacgcttt 31519263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 3295382 - 3295276
Alignment:
Q  31 ctcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttaccttatacgcttta 130  Q
    |||||| ||| |||||||||||||||||||||||  |||| || | || | ||||  |||||||||||||||||||| ||| ||||||||| ||| | ||    
T  3295382 ctcatccattaaatcaagaagcatatcaaattcaacatcataatctatcagtttcacttaaatcatggtcaagactagagctcttaccttagacgttgta 3295283  T
Q  131 ttcctta 137  Q
    |||||||    
T  3295282 ttcctta 3295276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 39882699 - 39882622
Alignment:
Q  281 tactcacaaaggaaaaggagcttaagcttcaaagaaaataatgctagccttagaaattggagtatgaaaataattaag 358  Q
    ||||||||||||||||||| |  ||||| ||||||||||||| |||| || ||||||||||||||| | |||||||||    
T  39882699 tactcacaaaggaaaaggaacacaagctacaaagaaaataatcctagactcagaaattggagtatgtatataattaag 39882622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 41943075 - 41943174
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  | || || | || |||||| |||||| |||||||||||||| |||| || ||||    
T  41943075 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacaacataatctatcattttcatttaaa-catggtcaagactagagcctttgcctt 41943173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 8e-63; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 362 - 528
Target Start/End: Original strand, 17751797 - 17751963
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||    
T  17751797 ggttttttctaacttgccttgggaaagaggtgggtaaactacccatcttgacgtggcatcactataacatggacaactgtaatctacaccaaaaaatgga 17751896  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaa 528  Q
      ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17751897 ttaggagatgggtttgatatattgacccggtatacttttgttattagcagattgacccattaattaa 17751963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 362 - 528
Target Start/End: Original strand, 1533587 - 1533752
Alignment:
Q  362 ggttttttctaaattgccttgggaaagaggtgggtaaactgccgatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga 461  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||| |||||| |||  ||||||||||    
T  1533587 ggttttttctaacttgccttgggaaagaggtgggtaaactacccatcttgacgtggcatcac-ataacatggacaactgtaatctacaccaaaaaatgga 1533685  T
Q  462 cgaggagatgggtttaagatattgacccggtatacttttgttattagcagattgacccattaattaa 528  Q
      ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533686 ttaggagatggatttgatatattgacccggtatacttttgttattagcagattgacccattaattaa 1533752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 17751999 - 17752088
Alignment:
Q  598 tgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||| |||||| |||  |||||||||||||||    
T  17751999 tgctttcttcttctaccttttctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttagga--aaaaattgattcatc 17752088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 1533790 - 1533878
Alignment:
Q  599 gctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    ||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||| |||||| |||  |||||||||||||||    
T  1533790 gctttcttcttctaccttttctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttagga--aaaaattgattcatc 1533878  T

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Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 2269882 - 2269971
Alignment:
Q  272 cccacgggatactcacaaaggaaaaggagcttaagcttcaaagaaaataatgc-tagccttagaaattggagtatgaaaataattaagaaa 361  Q
    |||||| | ||||||||| ||||||||||   ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  2269882 cccacgaggtactcacaa-ggaaaaggaggacaagcttcaaagaaaataatccatagacttagaaattggagtatgaaaataattaagaaa 2269971  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 13380297 - 13380378
Alignment:
Q  40 tgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctta 121  Q
    |||||||||||| ||||||||||||   ||| |||| || ||||||  |||||||||||||||||||| | |||||||||||    
T  13380297 tgaatcaagaagtatatcaaattcaacgtcataacctatcattttcacttaaatcatggtcaagactagaacccttacctta 13380378  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 31654632 - 31654726
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagccctta 116  Q
    ||||| || ||||||| ||| |||||||||||||||||||| ||  |||| || | || |||||| |||||| |||||||||||||| ||||||||    
T  31654632 aatcttttcactcatccattaaatcaagaagcatatcaaatccaacatcataatctatcattttcatttaaa-catggtcaagactagagccctta 31654726  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 24304412 - 24304510
Alignment:
Q  30 actcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttaccttatacgctt 128  Q
    ||||||| || |||||| |||||||||||||| || ||||| |||| ||||||||| | |||||| |||| ||||| | |||| |||| ||||| ||||    
T  24304412 actcatcgatagaatcatgaagcatatcaaatccaatatcataacctattattttcatctaaatcgtggttaagacaaaagcctttacattataagctt 24304510  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 51443583 - 51443661
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggt 99  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | || |||||| || ||||||||||    
T  51443583 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctatcattttcattcaaatcatggt 51443661  T

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Target: scaffold0259 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 2560 - 2660
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacctt 120  Q
    ||||| || ||||||| ||| ||||||||||||| |||||||||  |||| |||| || ||||||  ||||||||||||||| |||| ||||||||||||    
T  2560 aatcttttcactcatccattaaatcaagaagcatgtcaaattcaacatcataacctatcattttcaattaaatcatggtcaaaactagagcccttacctt 2659  T
Q  121 a 121  Q
    |    
T  2660 a 2660  T

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Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 2120 - 2023
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcccttacct 119  Q
    ||||| || ||||||| ||| |||||||||||||||||||||||  |||| || | ||| ||||| ||||||| ||||||||||||| |||||||||||    
T  2120 aatcttttcactcatccattaaatcaagaagcatatcaaattcaacatcataatctattgttttcatttaaat-atggtcaagactagagcccttacct 2023  T

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Target: scaffold0248 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 689
Target Start/End: Complemental strand, 15640 - 15579
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||||  |||||||||||||||    
T  15640 tttttcaacctaaccattacttccttcaatccatttgtaatttggga--aaaaattgattcatc 15579  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 278332 - 278393
Alignment:
Q  626 tttttcaacccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcatc 689  Q
    |||||||||| ||| ||| ||||||||||||||||| ||||||||  | |||||||||||||||    
T  278332 tttttcaacctaactattacttccttcaatccattcgtaatttgg--aaaaaaattgattcatc 278393  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 107953 - 107863
Alignment:
Q  21 aatctcttaactcatcaattgaatcaagaagcatatcaaattcagtatcacaaccaattattttcttttaaatcatggtcaagactatagcc 112  Q
    ||||| || ||||||| ||| ||||||| |||||||||||||||  |||| || | || |||||| |||||| |||||||||||||| ||||    
T  107953 aatcttttcactcatccattaaatcaaggagcatatcaaattcaacatcataatctatcattttcatttaaa-catggtcaagactagagcc 107863  T

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