View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16612_low_13 (Length: 351)
Name: NF16612_low_13
Description: NF16612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16612_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 35308514 - 35308835
Alignment:
| Q |
13 |
aatattaatctacacaatttacgcgaaggaaattaaatccacacacaaaatataaccattgtatgctcaaaataatttgtatataacaattggtattcta |
112 |
Q |
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| T |
35308514 |
aatattaatctaca-attgtacacgaatgatattaaatccacacacaaaatataaccattgtatgctcaaaataatttgtatataacaattggtattcta |
35308612 |
T |
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| Q |
113 |
tatcttaactattatcaatagtagtaccatattagtcttttgatgaagacgacaaattaagataaagaagcaaattataatggataacacatgtgaggag |
212 |
Q |
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| T |
35308613 |
tatcttaactattatcaatagtagtaccatattagtcttttgatgaagacgacaaattaagataaagaagcaaattataatggataacacatgtgaggag |
35308712 |
T |
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| Q |
213 |
tcatagtcaaaggtcaactagatcctgtcaatattaaccatcaaaacacacatatagtcagaccatctacctgtaataccaattccctttgtcccttaac |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35308713 |
tcatagtcaaaggtcaactagatcctgtcaatattaaccatcaaaacacacatatagtcagaccatctacctgtaataccaattccctttgtcccttaac |
35308812 |
T |
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| Q |
313 |
ttagaggagaaagtactagaatg |
335 |
Q |
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||||||||||||||||||||||| |
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| T |
35308813 |
ttagaggagaaagtactagaatg |
35308835 |
T |
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