View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16615_high_9 (Length: 269)
Name: NF16615_high_9
Description: NF16615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16615_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 33943588 - 33943345
Alignment:
| Q |
10 |
ttatggtttatgatgtccatcacccttccaagtacacaaattgggagtttatgccaaatggagctcataaagtcaatgttagtggatatcatgattggat |
109 |
Q |
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| T |
33943588 |
ttattgttcatgatgtccatcacccttccaagtacacaaattgggagtttatgccaaatggagctcataaagtcaatgttagtggatatcatgattggat |
33943489 |
T |
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| Q |
110 |
aataagtaactcgacccgtgaaggccttattcaaggctcgagtggcaaatccttcaaaggtttttactataatttaggggaataacaatgttattggtgt |
209 |
Q |
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| T |
33943488 |
aataagtaactcgacccgtgaaggccttattcaaggctcgagtggcaaatccttcaaaggtttttactataatttaggggaataacaatgttattggtgt |
33943389 |
T |
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| Q |
210 |
ttagatgtaagctattccacatgatattaagttggttcgtacat |
253 |
Q |
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| T |
33943388 |
ttagatgtaagctattccacatgatattaagttggctcgtacat |
33943345 |
T |
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