View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16615_low_11 (Length: 253)

Name: NF16615_low_11
Description: NF16615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16615_low_11
NF16615_low_11
[»] chr1 (30 HSPs)
chr1 (1-118)||(50209757-50209874)
chr1 (2-110)||(22354123-22354231)
chr1 (2-120)||(22355726-22355844)
chr1 (2-120)||(27250281-27250399)
chr1 (1-118)||(21301081-21301198)
chr1 (1-109)||(433468-433576)
chr1 (1-110)||(34510241-34510350)
chr1 (1-120)||(21027130-21027249)
chr1 (1-110)||(22532730-22532839)
chr1 (4-118)||(20135651-20135766)
chr1 (1-120)||(20846771-20846890)
chr1 (1-114)||(20919062-20919175)
chr1 (2-88)||(22357444-22357530)
chr1 (2-108)||(38800955-38801061)
chr1 (4-109)||(20091026-20091131)
chr1 (37-118)||(20228364-20228445)
chr1 (2-114)||(22468243-22468356)
chr1 (1-108)||(33681470-33681578)
chr1 (2-110)||(22921418-22921526)
chr1 (2-110)||(43697822-43697930)
chr1 (6-56)||(21162194-21162244)
chr1 (74-108)||(21754577-21754611)
chr1 (37-118)||(33798003-33798084)
chr1 (37-107)||(20248774-20248845)
chr1 (71-110)||(35260629-35260668)
chr1 (2-108)||(42864764-42864871)
chr1 (14-108)||(45307764-45307859)
chr1 (36-110)||(20637347-20637421)
chr1 (68-109)||(26065520-26065561)
chr1 (40-88)||(35981260-35981308)
[»] chr8 (37 HSPs)
chr8 (1-118)||(18817953-18818070)
chr8 (1-118)||(18878780-18878897)
chr8 (1-118)||(19800970-19801087)
chr8 (1-118)||(23406842-23406959)
chr8 (2-118)||(20536670-20536786)
chr8 (1-110)||(21923479-21923588)
chr8 (1-114)||(16091888-16092001)
chr8 (1-110)||(28648595-28648704)
chr8 (2-108)||(5865830-5865936)
chr8 (2-108)||(31971706-31971812)
chr8 (2-108)||(41598646-41598752)
chr8 (2-104)||(17141375-17141477)
chr8 (2-108)||(21249843-21249949)
chr8 (4-110)||(22875529-22875635)
chr8 (2-108)||(45130584-45130690)
chr8 (1-110)||(6759718-6759827)
chr8 (1-110)||(22627196-22627305)
chr8 (2-108)||(21255681-21255787)
chr8 (2-108)||(21918563-21918669)
chr8 (2-99)||(16199220-16199317)
chr8 (1-118)||(7373210-7373328)
chr8 (1-118)||(23649014-23649131)
chr8 (2-108)||(21389005-21389112)
chr8 (37-110)||(21860063-21860136)
chr8 (2-97)||(21491454-21491549)
chr8 (37-110)||(21286718-21286791)
chr8 (9-108)||(21395529-21395629)
chr8 (9-108)||(21790022-21790122)
chr8 (1-108)||(26355250-26355358)
chr8 (2-114)||(6520830-6520942)
chr8 (1-108)||(21674166-21674274)
chr8 (37-108)||(23760392-23760464)
chr8 (67-108)||(22526099-22526140)
chr8 (35-108)||(37115978-37116051)
chr8 (67-108)||(17438982-17439023)
chr8 (67-108)||(22365266-22365307)
chr8 (40-88)||(5610211-5610259)
[»] chr7 (35 HSPs)
chr7 (1-118)||(12699293-12699410)
chr7 (1-118)||(9509650-9509767)
chr7 (1-110)||(38227941-38228050)
chr7 (2-118)||(39267189-39267305)
chr7 (2-118)||(9751093-9751209)
chr7 (1-110)||(3563915-3564024)
chr7 (2-117)||(26212447-26212562)
chr7 (2-108)||(27847397-27847503)
chr7 (2-118)||(18302640-18302756)
chr7 (2-120)||(11995599-11995717)
chr7 (2-108)||(34201245-34201351)
chr7 (156-242)||(10866051-10866135)
chr7 (2-120)||(15754428-15754546)
chr7 (2-120)||(40443839-40443957)
chr7 (9-107)||(15143590-15143688)
chr7 (2-107)||(16385812-16385917)
chr7 (1-108)||(810681-810789)
chr7 (2-108)||(19649037-19649144)
chr7 (2-65)||(28504897-28504960)
chr7 (1-109)||(12756268-12756377)
chr7 (2-62)||(2831905-2831965)
chr7 (14-105)||(21064717-21064809)
chr7 (2-108)||(24054928-24055035)
chr7 (37-110)||(16219267-16219340)
chr7 (1-108)||(44116965-44117073)
chr7 (1-108)||(68207-68315)
chr7 (2-110)||(47832270-47832378)
chr7 (2-108)||(11880712-11880819)
chr7 (1-108)||(18006102-18006210)
chr7 (1-108)||(44014635-44014743)
chr7 (69-108)||(9703772-9703811)
chr7 (69-110)||(9389267-9389308)
chr7 (2-108)||(3272247-3272354)
chr7 (14-108)||(4993960-4994055)
chr7 (69-110)||(17061532-17061573)
[»] chr6 (40 HSPs)
chr6 (1-118)||(22779770-22779887)
chr6 (2-118)||(17287339-17287455)
chr6 (2-118)||(27415497-27415613)
chr6 (2-120)||(20637835-20637953)
chr6 (1-110)||(28496024-28496133)
chr6 (1-110)||(29808434-29808543)
chr6 (2-118)||(21939845-21939961)
chr6 (2-120)||(1561765-1561883)
chr6 (2-108)||(16920197-16920303)
chr6 (1-110)||(18409378-18409487)
chr6 (1-110)||(19303092-19303201)
chr6 (2-108)||(22439261-22439368)
chr6 (2-118)||(1645140-1645256)
chr6 (1-110)||(18457175-18457285)
chr6 (2-113)||(25602932-25603044)
chr6 (2-110)||(25628906-25629014)
chr6 (2-108)||(19863439-19863546)
chr6 (2-108)||(22831953-22832060)
chr6 (2-110)||(15893981-15894089)
chr6 (2-64)||(22334479-22334541)
chr6 (37-110)||(22080287-22080361)
chr6 (2-110)||(25956172-25956280)
chr6 (1-56)||(20594234-20594289)
chr6 (2-108)||(22432711-22432818)
chr6 (6-108)||(31154950-31155053)
chr6 (2-107)||(25641737-25641843)
chr6 (37-110)||(23019904-23019977)
chr6 (1-108)||(31164410-31164518)
chr6 (6-108)||(4185375-4185478)
chr6 (2-108)||(18180948-18181055)
chr6 (1-108)||(19652656-19652764)
chr6 (6-104)||(4667769-4667868)
chr6 (6-104)||(4674616-4674715)
chr6 (77-110)||(15539816-15539849)
chr6 (67-108)||(18230771-18230812)
chr6 (67-108)||(18231153-18231194)
chr6 (67-108)||(20224546-20224587)
chr6 (67-108)||(22118530-22118571)
chr6 (2-35)||(25611349-25611382)
chr6 (74-110)||(20594286-20594322)
[»] chr4 (39 HSPs)
chr4 (1-118)||(22636895-22637012)
chr4 (1-118)||(44053290-44053407)
chr4 (2-120)||(12903207-12903325)
chr4 (3-120)||(16239533-16239650)
chr4 (2-120)||(7089328-7089446)
chr4 (4-110)||(20156841-20156947)
chr4 (4-108)||(3097096-3097200)
chr4 (2-118)||(24029203-24029319)
chr4 (1-110)||(15091358-15091467)
chr4 (6-118)||(3332284-3332396)
chr4 (2-108)||(15552275-15552382)
chr4 (2-118)||(22633756-22633872)
chr4 (2-108)||(17053493-17053599)
chr4 (1-110)||(16377073-16377182)
chr4 (1-110)||(44928474-44928583)
chr4 (2-106)||(14052869-14052972)
chr4 (1-110)||(44102670-44102780)
chr4 (1-110)||(12774459-12774569)
chr4 (1-88)||(14039110-14039197)
chr4 (1-110)||(21815182-21815292)
chr4 (2-120)||(16597107-16597225)
chr4 (1-110)||(6190894-6191004)
chr4 (1-110)||(21818275-21818385)
chr4 (1-64)||(7799158-7799222)
chr4 (2-62)||(13812408-13812468)
chr4 (2-110)||(39705839-39705947)
chr4 (37-110)||(43198139-43198212)
chr4 (74-118)||(7799210-7799254)
chr4 (77-120)||(23374074-23374117)
chr4 (2-108)||(13569971-13570078)
chr4 (2-108)||(23843938-23844045)
chr4 (2-108)||(44676091-44676198)
chr4 (15-108)||(46639925-46640018)
chr4 (2-110)||(13845001-13845109)
chr4 (69-108)||(10314244-10314283)
chr4 (2-108)||(15121356-15121463)
chr4 (75-108)||(8846889-8846922)
chr4 (67-108)||(53081652-53081693)
chr4 (68-108)||(12287686-12287726)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-120)||(13661-13780)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-118)||(20864-20981)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-110)||(40372-40481)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-118)||(2312-2429)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-114)||(339498-339611)
scaffold0003 (2-118)||(71748-71864)
[»] chr5 (36 HSPs)
chr5 (1-118)||(23390039-23390156)
chr5 (1-118)||(25421993-25422110)
chr5 (1-110)||(24494029-24494138)
chr5 (2-110)||(1096929-1097037)
chr5 (2-110)||(20910363-20910471)
chr5 (2-118)||(22119736-22119852)
chr5 (1-108)||(21985700-21985807)
chr5 (1-118)||(25431855-25431972)
chr5 (2-120)||(22075470-22075588)
chr5 (1-106)||(9078413-9078518)
chr5 (2-118)||(21871114-21871230)
chr5 (2-118)||(21875394-21875510)
chr5 (1-106)||(24529682-24529787)
chr5 (2-118)||(19660380-19660496)
chr5 (1-110)||(11580795-11580905)
chr5 (2-108)||(22106937-22107043)
chr5 (1-110)||(29916589-29916699)
chr5 (2-62)||(8286452-8286512)
chr5 (2-118)||(24766885-24766996)
chr5 (2-108)||(23201828-23201935)
chr5 (2-108)||(37724363-37724470)
chr5 (37-118)||(21498560-21498641)
chr5 (1-60)||(13095955-13096014)
chr5 (2-108)||(31342562-31342669)
chr5 (37-110)||(21329046-21329119)
chr5 (1-108)||(22959085-22959193)
chr5 (79-114)||(8286422-8286457)
chr5 (1-60)||(13025771-13025830)
chr5 (1-90)||(19669361-19669451)
chr5 (69-119)||(22144578-22144628)
chr5 (4-108)||(14079609-14079714)
chr5 (37-110)||(26011585-26011658)
chr5 (69-110)||(36154400-36154441)
chr5 (2-56)||(26742363-26742417)
chr5 (40-88)||(21741116-21741164)
chr5 (17-108)||(22177696-22177787)
[»] scaffold1842 (1 HSPs)
scaffold1842 (2-121)||(600-719)
[»] scaffold0011 (2 HSPs)
scaffold0011 (2-121)||(167530-167649)
scaffold0011 (1-118)||(52373-52490)
[»] chr3 (55 HSPs)
chr3 (5-120)||(13442717-13442832)
chr3 (2-115)||(20697993-20698106)
chr3 (1-110)||(26687348-26687457)
chr3 (1-118)||(11424306-11424423)
chr3 (1-110)||(17247837-17247946)
chr3 (1-118)||(17499800-17499917)
chr3 (1-118)||(17488318-17488435)
chr3 (1-110)||(25475936-25476045)
chr3 (2-110)||(14666067-14666175)
chr3 (2-110)||(14735580-14735688)
chr3 (1-110)||(53070249-53070359)
chr3 (1-110)||(18438995-18439104)
chr3 (1-110)||(23082912-23083021)
chr3 (1-118)||(43842639-43842756)
chr3 (18-118)||(184318-184418)
chr3 (2-120)||(13209869-13209987)
chr3 (2-108)||(14179784-14179890)
chr3 (4-117)||(12851908-12852021)
chr3 (1-110)||(14973315-14973424)
chr3 (1-107)||(40213275-40213381)
chr3 (2-118)||(30030290-30030406)
chr3 (2-108)||(16809847-16809953)
chr3 (2-118)||(12399657-12399772)
chr3 (1-108)||(14576386-14576493)
chr3 (2-84)||(14669222-14669304)
chr3 (1-108)||(14573049-14573156)
chr3 (1-114)||(12933856-12933970)
chr3 (2-114)||(23408890-23409003)
chr3 (2-108)||(12340214-12340321)
chr3 (2-108)||(15877381-15877488)
chr3 (1-108)||(1644235-1644343)
chr3 (37-108)||(9513407-9513479)
chr3 (37-108)||(9521382-9521454)
chr3 (46-110)||(17247084-17247148)
chr3 (37-108)||(4588368-4588439)
chr3 (1-110)||(16104241-16104351)
chr3 (37-108)||(42386908-42386979)
chr3 (1-107)||(49389197-49389304)
chr3 (2-113)||(15471386-15471497)
chr3 (38-114)||(14234988-14235064)
chr3 (50-110)||(14669367-14669427)
chr3 (1-108)||(16097791-16097899)
chr3 (1-108)||(49667636-49667744)
chr3 (15-108)||(21837983-21838076)
chr3 (2-108)||(17524727-17524834)
chr3 (15-108)||(43927663-43927756)
chr3 (1-108)||(12171669-12171777)
chr3 (35-107)||(22109830-22109903)
chr3 (37-110)||(52523279-52523351)
chr3 (57-108)||(32308186-32308237)
chr3 (79-108)||(321567-321596)
chr3 (156-204)||(379353-379404)
chr3 (37-110)||(2050753-2050825)
chr3 (1-34)||(17247147-17247180)
chr3 (40-88)||(22791798-22791846)
[»] scaffold0292 (3 HSPs)
scaffold0292 (1-118)||(803-920)
scaffold0292 (1-55)||(3931-3985)
scaffold0292 (78-118)||(3987-4027)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-118)||(125043-125160)
scaffold0021 (2-108)||(175226-175333)
scaffold0021 (1-108)||(63022-63130)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-120)||(5662-5781)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-115)||(15161-15275)
[»] chr2 (28 HSPs)
chr2 (2-120)||(23286312-23286430)
chr2 (2-120)||(23653951-23654069)
chr2 (1-110)||(23660483-23660592)
chr2 (1-118)||(27754036-27754153)
chr2 (2-106)||(28291857-28291961)
chr2 (1-106)||(298369-298475)
chr2 (1-118)||(23076901-23077016)
chr2 (27-118)||(23060817-23060908)
chr2 (2-108)||(20309556-20309662)
chr2 (1-110)||(22337576-22337685)
chr2 (1-118)||(22730776-22730893)
chr2 (1-106)||(22737735-22737840)
chr2 (1-110)||(32451479-32451589)
chr2 (5-108)||(37680-37783)
chr2 (2-106)||(23100785-23100890)
chr2 (2-108)||(22740513-22740620)
chr2 (2-108)||(22758268-22758375)
chr2 (37-108)||(40621762-40621833)
chr2 (36-110)||(7679792-7679866)
chr2 (2-116)||(24658099-24658213)
chr2 (1-108)||(22133769-22133877)
chr2 (49-107)||(23038541-23038599)
chr2 (2-107)||(22811488-22811594)
chr2 (2-108)||(25176304-25176410)
chr2 (68-109)||(20519670-20519711)
chr2 (78-107)||(22798680-22798709)
chr2 (74-110)||(22412612-22412648)
chr2 (50-110)||(23705830-23705890)
[»] scaffold2044 (1 HSPs)
scaffold2044 (1-118)||(999-1116)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-118)||(1621-1738)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-118)||(13553-13670)
scaffold0175 (2-108)||(34582-34688)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-118)||(19969-20086)
scaffold0031 (2-108)||(65346-65453)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-114)||(21352-21464)
[»] scaffold0352 (1 HSPs)
scaffold0352 (4-110)||(17559-17665)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-115)||(16761-16875)
scaffold0056 (2-118)||(78905-79021)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-110)||(365-474)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-118)||(556-673)
[»] scaffold0389 (1 HSPs)
scaffold0389 (2-119)||(13150-13267)
[»] scaffold0358 (2 HSPs)
scaffold0358 (2-107)||(387-492)
scaffold0358 (2-107)||(5163-5268)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-110)||(18509-18618)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-114)||(4969-5082)
scaffold0228 (1-114)||(12551-12664)
scaffold0228 (1-114)||(22503-22616)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-118)||(25608-25725)
scaffold0122 (1-107)||(33048-33154)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-114)||(10619-10732)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-107)||(23856-23962)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-110)||(513-622)
scaffold0395 (4-108)||(8044-8149)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-118)||(39474-39591)
scaffold0026 (1-106)||(40317-40422)
[»] scaffold0124 (1 HSPs)
scaffold0124 (4-118)||(24193-24308)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-120)||(14938-15057)
[»] scaffold0718 (1 HSPs)
scaffold0718 (2-108)||(4695-4801)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-87)||(8936-9022)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-107)||(10605-10711)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-118)||(6371-6488)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-118)||(8076-8193)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-110)||(2636-2744)
[»] scaffold0347 (1 HSPs)
scaffold0347 (2-118)||(489-605)
[»] scaffold0037 (1 HSPs)
scaffold0037 (2-106)||(79887-79991)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-120)||(16119-16238)
scaffold0261 (2-108)||(1799-1906)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-120)||(2403-2521)
[»] scaffold0351 (2 HSPs)
scaffold0351 (2-108)||(16730-16836)
scaffold0351 (78-108)||(16881-16911)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-110)||(20573-20682)
[»] scaffold0070 (1 HSPs)
scaffold0070 (2-110)||(4985-5093)
[»] scaffold0598 (1 HSPs)
scaffold0598 (2-108)||(616-722)
[»] scaffold0456 (1 HSPs)
scaffold0456 (2-108)||(9990-10096)
[»] scaffold0120 (3 HSPs)
scaffold0120 (5-115)||(46390-46500)
scaffold0120 (5-110)||(32510-32615)
scaffold0120 (1-110)||(16547-16656)
[»] scaffold0427 (1 HSPs)
scaffold0427 (2-107)||(13946-14051)
[»] scaffold0346 (1 HSPs)
scaffold0346 (2-118)||(17267-17383)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-118)||(10372-10488)
[»] scaffold0107 (1 HSPs)
scaffold0107 (2-110)||(14981-15089)
[»] scaffold0423 (1 HSPs)
scaffold0423 (2-108)||(10825-10931)
[»] scaffold0403 (1 HSPs)
scaffold0403 (2-120)||(5299-5417)
[»] scaffold0161 (1 HSPs)
scaffold0161 (2-120)||(1986-2104)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-108)||(47437-47543)
[»] scaffold1992 (1 HSPs)
scaffold1992 (1-120)||(253-373)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-110)||(16150-16259)
[»] scaffold0221 (1 HSPs)
scaffold0221 (6-110)||(12360-12464)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-110)||(17241-17351)
[»] scaffold0218 (2 HSPs)
scaffold0218 (2-120)||(28821-28939)
scaffold0218 (41-110)||(7572-7641)
[»] scaffold0114 (2 HSPs)
scaffold0114 (2-108)||(15029-15135)
scaffold0114 (2-108)||(32829-32935)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-120)||(32515-32633)
[»] scaffold0555 (2 HSPs)
scaffold0555 (2-107)||(1041-1146)
scaffold0555 (37-120)||(10108-10192)
[»] scaffold0364 (1 HSPs)
scaffold0364 (37-110)||(17171-17244)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-121)||(39220-39330)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-110)||(7061-7168)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-108)||(28361-28469)
[»] scaffold0106 (3 HSPs)
scaffold0106 (9-108)||(1744-1844)
scaffold0106 (9-108)||(7721-7821)
scaffold0106 (2-105)||(16109-16213)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-110)||(12389-12499)
[»] scaffold0075 (1 HSPs)
scaffold0075 (2-65)||(7890-7953)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-106)||(51438-51544)
scaffold0034 (37-110)||(33033-33105)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-108)||(70255-70362)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-110)||(3393-3503)
[»] scaffold0628 (1 HSPs)
scaffold0628 (37-111)||(2353-2427)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-106)||(6997-7103)
[»] scaffold0017 (2 HSPs)
scaffold0017 (4-110)||(190833-190939)
scaffold0017 (4-110)||(192536-192642)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-108)||(2196-2304)
[»] scaffold0130 (1 HSPs)
scaffold0130 (5-58)||(29001-29054)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-108)||(1854-1961)
[»] scaffold0167 (1 HSPs)
scaffold0167 (2-118)||(35935-36051)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-118)||(9382-9493)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-106)||(7272-7378)
scaffold0556 (37-110)||(8513-8586)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-110)||(19727-19837)
[»] scaffold0059 (1 HSPs)
scaffold0059 (56-118)||(19308-19370)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-110)||(101855-101965)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-101)||(130368-130469)
[»] scaffold0324 (1 HSPs)
scaffold0324 (2-108)||(15860-15967)
[»] scaffold0216 (1 HSPs)
scaffold0216 (2-108)||(16674-16781)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-114)||(161146-161260)
[»] scaffold0028 (1 HSPs)
scaffold0028 (54-108)||(1-55)
[»] scaffold1895 (1 HSPs)
scaffold1895 (12-65)||(1-54)
[»] scaffold1257 (1 HSPs)
scaffold1257 (37-110)||(1850-1923)
[»] scaffold0032 (1 HSPs)
scaffold0032 (4-108)||(52032-52136)
[»] scaffold0476 (1 HSPs)
scaffold0476 (36-108)||(8297-8369)
[»] scaffold0138 (3 HSPs)
scaffold0138 (50-110)||(13450-13510)
scaffold0138 (3-108)||(29771-29877)
scaffold0138 (3-108)||(41767-41873)
[»] scaffold0101 (1 HSPs)
scaffold0101 (2-108)||(8510-8617)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-107)||(591-697)
[»] scaffold0507 (1 HSPs)
scaffold0507 (40-110)||(7608-7678)
[»] scaffold0131 (1 HSPs)
scaffold0131 (2-108)||(36917-37023)
[»] scaffold0078 (1 HSPs)
scaffold0078 (40-110)||(11028-11098)
[»] scaffold0333 (2 HSPs)
scaffold0333 (2-107)||(7075-7180)
scaffold0333 (2-107)||(14455-14560)
[»] scaffold0139 (1 HSPs)
scaffold0139 (2-47)||(20442-20487)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-108)||(80863-80904)
[»] scaffold0149 (2 HSPs)
scaffold0149 (5-108)||(4181-4285)
scaffold0149 (5-108)||(8612-8716)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-102)||(15389-15489)
scaffold0020 (3-108)||(179112-179217)
[»] scaffold0475 (1 HSPs)
scaffold0475 (6-104)||(9542-9641)
[»] scaffold0273 (1 HSPs)
scaffold0273 (50-113)||(8986-9049)
[»] scaffold0174 (1 HSPs)
scaffold0174 (2-108)||(18006-18113)
[»] scaffold0210 (2 HSPs)
scaffold0210 (78-108)||(21359-21389)
scaffold0210 (78-108)||(29251-29281)
[»] scaffold0040 (1 HSPs)
scaffold0040 (68-110)||(103136-103178)
[»] scaffold0530 (1 HSPs)
scaffold0530 (36-113)||(576-653)
[»] scaffold0357 (1 HSPs)
scaffold0357 (35-106)||(3264-3335)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 50209874 - 50209757
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  50209874 atcaactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactc 50209775  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  50209774 gcgaggcggggaaaggtt 50209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 22354231 - 22354123
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  22354231 tcaactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgtgacgtgcaactcg 22354132  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  22354131 cgaggcggg 22354123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 22355844 - 22355726
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22355844 tcaactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 22355745  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  22355744 cgaggcggggaaaggttac 22355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 27250399 - 27250281
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  27250399 tcaactcaaaagtcaatattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 27250300  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||| |||||||| |||||    
T  27250299 cgagacggggaaaagttac 27250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21301198 - 21301081
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  21301198 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactc 21301099  T
Q  101 gcgaggcggggaaaggtt 118  Q
     |||||||||||||||||    
T  21301098 acgaggcggggaaaggtt 21301081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 433468 - 433576
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  433468 atcaactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 433567  T
Q  101 gcgaggcgg 109  Q
    |||||||||    
T  433568 gcgaggcgg 433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34510241 - 34510350
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| || | ||||||||||||| | |||||||||    
T  34510241 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcaaggtgcaactc 34510340  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  34510341 gcgaggcggg 34510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21027130 - 21027249
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||    
T  21027130 atcaactcaaaggtcaaaattacaaattcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactc 21027229  T
Q  101 gcgaggcggggaaaggttac 120  Q
    ||||||||||||||||||||    
T  21027230 gcgaggcggggaaaggttac 21027249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22532730 - 22532839
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||| |||||| |||||||||||||||   |||||||||    
T  22532730 atcaaatcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctcgacgagttcatctgctcgctatggcgagctgcagggtgcaactc 22532829  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  22532830 gcgaggcggg 22532839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 20135651 - 20135766
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |||||||| ||  || |||| ||||||||    
T  20135651 aactcaaaagtcaaaattacaaaatattgcatgctctctggtcaagctcgctatggcgagttcatctgctcgctatggcaagtcgcaacgtacaactcgc 20135750  T
Q  103 gaggcggggaaaggtt 118  Q
    ||||||||||||||||    
T  20135751 gaggcggggaaaggtt 20135766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20846890 - 20846771
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||| ||| |||||||||||    
T  20846890 atcaactcaaaggtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagttgcaacgtgcaactc 20846791  T
Q  101 gcgaggcggggaaaggttac 120  Q
    ||||||||||||||| ||||    
T  20846790 gcgaggcggggaaagattac 20846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20919062 - 20919175
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||    
T  20919062 atcaactcaaaggtcaaaattataaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactc 20919161  T
Q  101 gcgaggcggggaaa 114  Q
    | ||||||||||||    
T  20919162 gtgaggcggggaaa 20919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22357530 - 22357444
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  22357530 tcaactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgc 22357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 38801061 - 38800955
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  |  ||||||||||| |||||||||| ||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  38801061 tcaactcaaaagtcaaaaatatgaaatcttgcatgctctctggtctagctcgctaggtgagttcatctgttcgctgtggcgagctgcgacgtgcaactcg 38800962  T
Q  102 cgaggcg 108  Q
     ||||||    
T  38800961 tgaggcg 38800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 20091131 - 20091026
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||||   ||||| ||  ||||||| ||| ||||| ||||||||    
T  20091131 aactcaaaagtcaaaaataagaaatcttgcatgctctctggtcaagctcgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgaaactcgcg 20091032  T
Q  104 aggcgg 109  Q
    ||||||    
T  20091031 aggcgg 20091026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 20228445 - 20228364
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    |||||| ||||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||| |||||||||    
T  20228445 ctctctagtcaagctcgcgaggcgagttcaactgctcgctatcgcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 20228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 22468356 - 22468243
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||| ||| ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  22468356 tcaactcaaaagtcaaaactacgaaatcttacatgctctctgttcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 22468257  T
Q  101 gcgaggcggggaaa 114  Q
    || ||||| |||||    
T  22468256 gcaaggcgaggaaa 22468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33681470 - 33681578
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | | ||||||    
T  33681470 atcaactcaaaagtcaaaattacgaaatctgggtagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggagcaact 33681569  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  33681570 cgcgaggcg 33681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 22921526 - 22921418
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||| |||||||| || ||||| ||    |||||||||||  ||||||||| ||||   |||||| ||||||||||||||| | ||||||||||    
T  22921526 tcaactcaaaggtcaaaattacgaaatcatgacagctctctggtcacactcgctaggtgagtgaatctgctcgctatggcgagctgcaaggtgcaactcg 22921427  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  22921426 cgaggcggg 22921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 43697822 - 43697930
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | |||||||||     
T  43697822 tcaacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactca 43697921  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  43697922 cgaggcggg 43697930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 21162194 - 21162244
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 56  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||||||||    
T  21162194 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgcta 21162244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 21754577 - 21754611
Alignment:
Q  74 gctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||||||||||||||||    
T  21754577 gctatggcgagctgcgacgtgcaactcgcgaggcg 21754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 33798003 - 33798084
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    |||||||||||||||||| |||||||      | || ||||||||||||||| |||||||||||||||| || |||||||||    
T  33798003 ctctctggtcaagctcgcgaggcgagggatattactcgctatggcgagctgcaacgtgcaactcgcgagacgaggaaaggtt 33798084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 20248774 - 20248845
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    ||||||||||| ||| |||| |||||||||  ||| | ||||||||||| ||||| ||||||||||||||||    
T  20248774 ctctctggtcatgcttgctatggcgagttcaactgttcgctatggcgagttgcgaggtgcaactcgcgaggc 20248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 35260668 - 35260629
Alignment:
Q  71 cttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  35260668 cttgctatggcgagctgcaaggtgcaactcgcgaggcggg 35260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 42864871 - 42864764
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||  |||||||  |  || | |||  ||||||||||||||||||||||    
T  42864871 tcaactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctgtggcgagtaacattgttcgctgcggcgagctgcgacgtgcaactc 42864772  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  42864771 gcgaggcg 42864764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 45307764 - 45307859
Alignment:
Q  14 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  45307764 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 45307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 20637347 - 20637421
Alignment:
Q  36 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||  |||| |||||||||   ||| || ||||||||||||||| | ||||||||| |||||||||    
T  20637347 cctctctggtcacactcggtaggcgagtgaatctactcgctatggcgagctgcaaggtgcaactctcgaggcggg 20637421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 26065520 - 26065561
Alignment:
Q  68 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 109  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  26065520 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 26065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 35981308 - 35981260
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  35981308 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 35981260  T

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Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18818070 - 18817953
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18818070 atcaactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 18817971  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  18817970 gcgaggcggggaaaggtt 18817953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18878897 - 18878780
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18878897 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 18878798  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||| |||||||||||||    
T  18878797 gcgatgcggggaaaggtt 18878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19801087 - 19800970
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  19801087 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactc 19800988  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||||||| |||||||||    
T  19800987 gcgaggcgaggaaaggtt 19800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23406842 - 23406959
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||    
T  23406842 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggccagttcatctgctcgttatggcgagctgcgacgtgcaactc 23406941  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  23406942 gcgaggcggggaaaggtt 23406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 20536670 - 20536786
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||    
T  20536670 tcaactcgaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctatgacgtgcaactcg 20536769  T
Q  102 cgaggcggggaaaggtt 118  Q
    |||||||||||||||||    
T  20536770 cgaggcggggaaaggtt 20536786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21923588 - 21923479
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  21923588 atcaactcaaaagtcaaaatcacaaaatctcacatgctctctggtcaagctcgctaggcgagtacgtctgctcgctatggcgagctgcgacgtgcaactc 21923489  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  21923488 gcgaggcggg 21923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16092001 - 16091888
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||    
T  16092001 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagcttcgatgtgcaactc 16091902  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||| ||||||    
T  16091901 gcgaggctgggaaa 16091888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28648704 - 28648595
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  28648704 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 28648605  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  28648604 gcgaggcggg 28648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 5865936 - 5865830
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  5865936 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 5865837  T
Q  102 cgaggcg 108  Q
    |||||||    
T  5865836 cgaggcg 5865830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 31971706 - 31971812
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  31971706 tcaactcaaaagtcaaaaacacgaaatcttgcatgctctctggtctagctagctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 31971805  T
Q  102 cgaggcg 108  Q
    |||||||    
T  31971806 cgaggcg 31971812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 41598646 - 41598752
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  41598646 tcaactcaaaagtcaaaatcacggaatcctgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 41598745  T
Q  102 cgaggcg 108  Q
    |||||||    
T  41598746 cgaggcg 41598752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 17141375 - 17141477
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||    
T  17141375 tcaactcaaaagtaaaaaatacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcg 17141474  T
Q  102 cga 104  Q
    |||    
T  17141475 cga 17141477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 21249843 - 21249949
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  21249843 tcaactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 21249942  T
Q  102 cgaggcg 108  Q
    |||||||    
T  21249943 cgaggcg 21249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22875529 - 22875635
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||| | ||||||||||||    
T  22875529 aactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcaaggtgcaactcgcg 22875628  T
Q  104 aggcggg 110  Q
    |||||||    
T  22875629 aggcggg 22875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 45130690 - 45130584
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||| |||||||||||||  || |||||||||||  |||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  45130690 tcaattcaaaagtcaaaaatacgaaatcttgcatggtctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 45130591  T
Q  102 cgaggcg 108  Q
    |||||||    
T  45130590 cgaggcg 45130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6759718 - 6759827
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||| |||||| |||||||||||||||   |||||||||    
T  6759718 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcatggtgcaactc 6759817  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  6759818 gcgaggcggg 6759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22627196 - 22627305
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||| | |||||| ||||||   |||||||||    
T  22627196 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatatgctcgatatggcaagctgcagggtgcaactc 22627295  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  22627296 gcgaggcggg 22627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 21255681 - 21255787
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  21255681 tcaactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgatgtgcaactcg 21255780  T
Q  102 cgaggcg 108  Q
    |||||||    
T  21255781 cgaggcg 21255787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 21918669 - 21918563
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| || ||||||||| ||||||||||||||||   || | ||||||||||||||||||||||||||||    
T  21918669 tcaactcaaaagtcaaaattacgaaatcttgcatgctgtctggtcaatctcgctaggcgagttcaagtgttcgctatggcgagctgcgacgtgcaactcg 21918570  T
Q  102 cgaggcg 108  Q
    |||||||    
T  21918569 cgaggcg 21918563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 16199317 - 16199220
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  16199317 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 16199220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7373210 - 7373328
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  7373210 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaac 7373308  T
Q  99 tcgcgaggcggggaaaggtt 118  Q
    ||||||||| ||||||||||    
T  7373309 tcgcgaggcagggaaaggtt 7373328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23649014 - 23649131
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||||| ||| || || |||||    
T  23649014 atcaactcaaaagtcaaaaacatgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagttgctcgctatggcgagttgcaacatgtaactc 23649113  T
Q  101 gcgaggcggggaaaggtt 118  Q
    | |||||| |||||||||    
T  23649114 gggaggcgaggaaaggtt 23649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 21389112 - 21389005
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  21389112 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 21389013  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  21389012 gcgaggcg 21389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 21860136 - 21860063
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||||    
T  21860136 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggtgagctgcgacgagcaactcgcgaggcggg 21860063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 21491454 - 21491549
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaa 97  Q
    |||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | ||| ||||||||||| ||||||||    
T  21491454 tcaacttaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgctgtggcgagctgcaacgtgcaa 21491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 21286718 - 21286791
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21286718 ctctctggtcacactcgctaggcgagtggatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 21395629 - 21395529
Alignment:
Q  9 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21395629 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21395530  T
Q  108 g 108  Q
    |    
T  21395529 g 21395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 21790122 - 21790022
Alignment:
Q  9 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21790122 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21790023  T
Q  108 g 108  Q
    |    
T  21790022 g 21790022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26355358 - 26355250
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    |||| |||||| ||||| || ||||||||| |||| |||| |||||||||||||| ||||||||    
T  26355358 atcaactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgttatggcgagttcatctgtttgccatggcgagctgcgaggtgcaact 26355259  T
Q  100 cgcgaggcg 108  Q
    | |||||||    
T  26355258 cacgaggcg 26355250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 6520830 - 6520942
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||| |||||||| || ||||| ||   ||||||| ||||  || |||||||||||   |||||| | ||||||||||||| | ||||||||||    
T  6520830 tcaacttaaaggtcaaaattacgaaatcatgatgcctctctagtcacacttgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcg 6520929  T
Q  102 cgaggcggggaaa 114  Q
    |||||||||||||    
T  6520930 cgaggcggggaaa 6520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21674166 - 21674274
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |  |||||||||||||  |||||||    
T  21674166 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcacgttggcgagctgcgagatgcaact 21674265  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  21674266 cgcgaggcg 21674274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 23760464 - 23760392
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||| |||||||| ||||||||| |||||| || |||| ||||||||| |||||||||| ||||||    
T  23760464 ctctctggtcatgctcgctatggcgagttcatctgctcgcgatggtgagctgcgaggtgcaactcgtgaggcg 23760392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 22526099 - 22526140
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22526099 tctgcttgctatggcgagctgcaacatgcaactcgcgaggcg 22526140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 37116051 - 37115978
Alignment:
Q  35 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||||    
T  37116051 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 37115978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 17439023 - 17438982
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  17439023 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 17438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 22365266 - 22365307
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22365266 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 22365307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 5610259 - 5610211
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  5610259 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 5610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12699293 - 12699410
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  12699293 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgacttcatctgcttgctatggcgagctgcgacgtgcaactc 12699392  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||||| |||||||||||    
T  12699393 gcgaggtggggaaaggtt 12699410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9509650 - 9509767
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  9509650 atcaactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactc 9509749  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  9509750 gcgaggcggggaaaggtt 9509767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38227941 - 38228050
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  38227941 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 38228040  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  38228041 gcgaggcggg 38228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 39267305 - 39267189
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  39267305 tcaactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 39267206  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  39267205 cgaggcgaggaaaggtt 39267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 9751209 - 9751093
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||| ||||||    
T  9751209 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgtaactcg 9751110  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  9751109 cgaggcgaggaaaggtt 9751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3564024 - 3563915
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  3564024 atcaactcaaaagtcaaaataacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 3563925  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  3563924 gcgaggcggg 3563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 26212447 - 26212562
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||    
T  26212447 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcg 26212546  T
Q  102 cgaggcggggaaaggt 117  Q
    ||||||||||||||||    
T  26212547 cgaggcggggaaaggt 26212562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 27847503 - 27847397
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||    
T  27847503 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcg 27847404  T
Q  102 cgaggcg 108  Q
    |||||||    
T  27847403 cgaggcg 27847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 18302640 - 18302756
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||| |||||| ||||||||||  ||||| | | ||||||||||| ||||||||||||    
T  18302640 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcgttgtggcgagctgcaacgtgcaactcg 18302739  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  18302740 cgaggcgaggaaaggtt 18302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 11995717 - 11995599
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || || | |||||||||||| || ||||||| |    
T  11995717 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttttccatggcgagctgcaacatgcaacttg 11995618  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  11995617 cgaggcggggaaaggttac 11995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 34201245 - 34201351
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||  | ||||||||||||||||| ||||||||||    
T  34201245 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctattcgctatggcgagctgcgatgtgcaactcg 34201344  T
Q  102 cgaggcg 108  Q
    |||||||    
T  34201345 cgaggcg 34201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 10866135 - 10866051
Alignment:
Q  156 tagtgtggcttagcaagacgtttaataaaaagggcaagattgtcatttcctcctatatgggccacgtttcccccttttccccttcat 242  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  10866135 tagtgtggcttagcaagacttttaataaaaagggcaagattgtcattt-ttcctatatgggccacg-ttcccccttttccccttcat 10866051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 15754546 - 15754428
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||   | ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||    
T  15754546 tcaactcaaaagtcaaaaattcgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcg 15754447  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  15754446 cgaggcggggaaaagttac 15754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 40443839 - 40443957
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| || ||||||| ||||||||||||||||||   || | ||  ||||||||||| ||||||||||||    
T  40443839 tcaactcaaaagtcaaaaatacgaaatcttgcatgctttctggtctagctcgctaggcgagttcaagtgttcgccgtggcgagctgcaacgtgcaactcg 40443938  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  40443939 cgaggcggggaaaggttac 40443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 15143688 - 15143590
Alignment:
Q  9 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    ||||||||||||||| |||||| |||   ||||||||||||||||| |||||||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  15143688 aaaagtcaaaatcacgaaatctcgcaagttctctggtcaagctcgcaaggcgagttcatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 15143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 16385917 - 16385812
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||   || | | | ||||||||||| ||||||||||||    
T  16385917 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctgatctagctcgctaggcgagttcaagtgttcgttgtggcgagctgcaacgtgcaactcg 16385818  T
Q  102 cgaggc 107  Q
    | ||||    
T  16385817 caaggc 16385812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 810789 - 810681
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||    
T  810789 atcaactcaaaagtcaaaattacgaaatctggatggctctctggtcatgctcgctatggcgagttcatctgctcgctgtggcgagctgcgaggtgcaact 810690  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  810689 cgcgaggcg 810681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 19649144 - 19649037
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||     
T  19649144 tcaactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactt 19649045  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  19649044 gcgaggcg 19649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 28504960 - 28504897
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 65  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  28504960 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttc 28504897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12756377 - 12756268
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  |||||| |||| |||||||| ||||||||| |||||| || ||||||||||||||||||||||    
T  12756377 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctagtcatgctcgctatggcgagttcatctgctcgcgatggcgagctgcgacgtgcaac 12756279  T
Q  99 tcgcgaggcgg 109  Q
    |||||||||||    
T  12756278 tcgcgaggcgg 12756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 2831965 - 2831905
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 62  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  2831965 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgag 2831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 21064809 - 21064717
Alignment:
Q  14 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 105  Q
    |||||||||||||||||||||  |||||||||||  ||||||| |||||||     |||||||||||||||||||||| ||||||||||||||    
T  21064809 tcaaaatcacaaaatcttgcaagctctctggtcacactcgctacggcgagtaaacttgcttgctatggcgagctgcgaagtgcaactcgcgag 21064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 24054928 - 24055035
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  |||||||||||||| | ||||||||| |||||||| |||| ||||    | | | | |||||||||||||||||||||||    
T  24054928 tcaactcaaaagtcaaaactacaaaatcttgcatgcactctggtcatgctcgctatggcgtgttcagtcgttcgttgtggcgagctgcgacgtgcaactc 24055027  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  24055028 gcgaggcg 24055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 16219340 - 16219267
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  16219340 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 16219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44116965 - 44117073
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||| ||||||||| || |||| ||| ||  ||||||||||| ||||| || ||||||||| |||||| ||||||| ||||||||| |||||||    
T  44116965 atcaactcaagagtcaaaattacgaaat-ttggatagctctctggtcatgctcgttatggcgagttcatctgctcgctatggtgagctgcgatgtgcaac 44117063  T
Q  99 tcgcgaggcg 108  Q
    ||||||||||    
T  44117064 tcgcgaggcg 44117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 68207 - 68315
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |||||| ||||||||| ||||| ||    
T  68207 atcaactcaaaagtcaaaattacgaaatctggatatctctctggtcatgctcgctatggcgagttcatctgatcactatggtgagctgcgaggtgcacct 68306  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  68307 cgcgaggcg 68315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 47832270 - 47832378
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| |  |||||||||    
T  47832270 tcaacttaaaggtcaaaattacgaaatcatgatacctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaagatgcaactcg 47832369  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  47832370 cgaggcggg 47832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 11880712 - 11880819
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||    
T  11880712 tcaactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactc 11880811  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  11880812 gcgaggcg 11880819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18006102 - 18006210
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| || |||||| |||| | |||||| |||||| ||| |||||| |    
T  18006102 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggtgagttcatctgttcgctatgacgagcttcgaagtgcaatt 18006201  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  18006202 cgcgaggcg 18006210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44014635 - 44014743
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | |||||| | |  ||||| ||||||||    
T  44014635 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatgacaatttgcgaggtgcaact 44014734  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  44014735 cgcgaggcg 44014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 9703772 - 9703811
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9703772 tgctcgctatggcgagctgcgacgtgcaactcgcgaggcg 9703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 9389308 - 9389267
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  9389308 tgctcgctatggcgagctgcgaggtgcaactcgcgaggcggg 9389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 3272247 - 3272354
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| || ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || |||||    
T  3272247 tcaactcaaaagtcaaaattacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactc 3272346  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  3272347 gcgaggcg 3272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 4993960 - 4994055
Alignment:
Q  14 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  4993960 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 4994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 17061573 - 17061532
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  17061573 tgctcgctatggcgagctgcgacatgcaactcacgaggcggg 17061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22779887 - 22779770
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  22779887 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactc 22779788  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  22779787 gcgaggcggggaaaggtt 22779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 17287455 - 17287339
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||    
T  17287455 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcg 17287356  T
Q  102 cgaggcggggaaaggtt 118  Q
     ||||||||||||||||    
T  17287355 tgaggcggggaaaggtt 17287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 27415613 - 27415497
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  27415613 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 27415514  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  27415513 cgaggcgaggaaaggtt 27415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 20637953 - 20637835
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || |||||||| || |||| ||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  20637953 tcaactcaaaagtcaaaattacgaaatcttggatgctctttggtcaagctcactaggcaagttcatctgctcgctatggcgagctgcgacgtgcaactcg 20637854  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  20637853 cgaggcggggaaaagttac 20637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28496133 - 28496024
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  28496133 atcaactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactc 28496034  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  28496033 gcgaggcggg 28496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29808543 - 29808434
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  29808543 atcaactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactc 29808444  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  29808443 gcgaggcggg 29808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 21939845 - 21939961
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| | ||||||||||    
T  21939845 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaatgtgcaactcg 21939944  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||| ||| |||||||||    
T  21939945 cgaagcgaggaaaggtt 21939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 1561765 - 1561883
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||    
T  1561765 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcg 1561864  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  1561865 cgaggcggggaaaagttac 1561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 16920303 - 16920197
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| | || | ||||||||||||||||||||||||||||    
T  16920303 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatttgttcgctatggcgagctgcgacgtgcaactcg 16920204  T
Q  102 cgaggcg 108  Q
    |||||||    
T  16920203 cgaggcg 16920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18409487 - 18409378
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||||||   |||||||||    
T  18409487 atcaactcaaaggtcaaaatcacgaaatcctgcatgctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcagggtgcaactc 18409388  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  18409387 gcgaggcggg 18409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19303201 - 19303092
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||| | ||| |||||| |||||| ||||||||||||| | | |||||||||    
T  19303201 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcacgaggtgagttcatctgctcgctatggcgagctccaaggtgcaactc 19303102  T
Q  101 gcgaggcggg 110  Q
    || |||||||    
T  19303101 gcaaggcggg 19303092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22439261 - 22439368
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||| |||||    
T  22439261 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgtaactc 22439360  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  22439361 gcgaggcg 22439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 1645140 - 1645256
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||| | || |||    ||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  ||||||||||||    
T  1645140 tcaactcaaaagtcaaaaactcagaattcgacatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtaacgtgcaactcg 1645239  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  1645240 cgaggcgaggaaaggtt 1645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18457175 - 18457285
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||| |||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||    
T  18457175 atcaactcaaaagttaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgtcgtgcaac 18457273  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  18457274 tcgcgaggcggg 18457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 25603044 - 25602932
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || |||||   |||||  || ||||||||||| || ||||||||    
T  25603044 tcaactcaaaagttaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggtgagttaagctgctctctgtggcgagctgcaacatgcaactc 25602945  T
Q  101 gcgaggcggggaa 113  Q
    |||||||| ||||    
T  25602944 gcgaggcgaggaa 25602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 25629014 - 25628906
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||||||||||||||  |||||||||   |||| ||||||| ||||||||| |||||| |||||| ||||||||||||||| | || |||||||    
T  25629014 tcaactaaaaagtcaaaatcatgaaatcttgcgagctctttggtcaaactcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcg 25628915  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  25628914 cgaggcggg 25628906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 19863439 - 19863546
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  19863439 tcaactcaaaagtcaaaactacgaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 19863538  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  19863539 gcgaggcg 19863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22831953 - 22832060
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||| |||| ||| || ||||||   || | |||||||||||||||||||||||||||    
T  22831953 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcactatggtgagttcagttgttcgctatggcgagctgcgacgtgcaactc 22832052  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  22832053 gcgaggcg 22832060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 15894089 - 15893981
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||| ||||    
T  15894089 tcaactcaaaagtcaaaagtacgaaatcttgcatgctctctagtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcagctcg 15893990  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  15893989 cgaggcggg 15893981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 22334541 - 22334479
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagtt 64  Q
    ||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||    
T  22334541 tcaactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagtt 22334479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 22080361 - 22080287
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||| | |||||||||| ||||||||    
T  22080361 ctctctggtcaagctcgctatggtgagttcatctgtttgctatggcgagctgcaaggtgcaactcgtgaggcggg 22080287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 25956280 - 25956172
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||| ||||    
T  25956280 tcaacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcg 25956181  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  25956180 cgaggcggg 25956172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20594234 - 20594289
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 56  Q
    |||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  20594234 atcaactcaaaagtaaaaatcacgaaatcttgcaagctctctggtcaagctcgcta 20594289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22432711 - 22432818
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| |||||||| ||||| |||   || | | | |||| ||||||| |||||||||     
T  22432711 tcaactcaaaagtcaaaactacaaaatcttgcatgctctctggtcatgctcgctatggcgaattcagttggtcgttgtggcaagctgcggcgtgcaactt 22432810  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  22432811 gcgaggcg 22432818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 31155053 - 31154950
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    ||||||||||||||  ||| |||||||||| |||||||||| ||||||||| |||||||   | |||| ||| |||||||||||  || |||||||||||    
T  31155053 ctcaaaagtcaaaaaaacagaatcttgcatgctctctggtctagctcgctatggcgagtatgtttgctcgctgtggcgagctgcatcgcgcaactcgcga 31154954  T
Q  105 ggcg 108  Q
    ||||    
T  31154953 ggcg 31154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25641843 - 25641737
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||  |||||||||| ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||| ||||||    
T  25641843 tcaactcaaaagtccaaactacaaaatcttacatgctctctggtcatgctcgttatggcgagttcagttgttcgctgtggcgagctgcgacgtccaactc 25641744  T
Q  101 gcgaggc 107  Q
    | |||||    
T  25641743 gtgaggc 25641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 23019904 - 23019977
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||   ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  23019904 ctctctggtcgcactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31164518 - 31164410
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||| || ||||||||| |||||||    ||||| ||| |||||||||||   | ||||||    
T  31164518 atcaactcaaatgtcaaaattgcaaaatcttgcatgctctctgctctagctcgctatggcgagtaggactgctcgctgtggcgagctgcattgcgcaact 31164419  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  31164418 cgcgaggcg 31164410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 4185478 - 4185375
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||||||| |||| |||||||||| |||||||||| ||||||||| |||||||     |||| | | |||||||||||  || |||||||||||    
T  4185478 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgctatggcgagtaggattgctcgttgtggcgagctgcatcgcgcaactcgcga 4185379  T
Q  105 ggcg 108  Q
    ||||    
T  4185378 ggcg 4185375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 18180948 - 18181055
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||| ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || |||||    
T  18180948 tcaactcaaaagtcaaaatcacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactc 18181047  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  18181048 gcgaggcg 18181055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19652656 - 19652764
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| | || | ||||||||||| ||| | ||| ||||    
T  19652656 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatttgttcgctatggcgagatgcaaggtgtaact 19652755  T
Q  100 cgcgaggcg 108  Q
    ||| |||||    
T  19652756 cgcaaggcg 19652764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 4667868 - 4667769
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4667868 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4667769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 4674715 - 4674616
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4674715 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4674616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 15539816 - 15539849
Alignment:
Q  77 atggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||||| |||||||||||||||||||    
T  15539816 atggcgagctgcgaggtgcaactcgcgaggcggg 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 18230771 - 18230812
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18230771 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18230812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 18231153 - 18231194
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18231153 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 20224546 - 20224587
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  20224546 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 20224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 22118530 - 22118571
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22118530 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 22118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 25611382 - 25611349
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcat 35  Q
    |||||||||||||||||||||| |||||||||||    
T  25611382 tcaactcaaaagtcaaaatcacgaaatcttgcat 25611349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 20594286 - 20594322
Alignment:
Q  74 gctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||||| | |||||||||||||||||||    
T  20594286 gctatggcgagctgcaaggtgcaactcgcgaggcggg 20594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22636895 - 22637012
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  22636895 atcaactcagaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactc 22636994  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  22636995 gcgaggcggggaaaggtt 22637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 44053290 - 44053407
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  44053290 atcaactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactc 44053389  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  44053390 gcgaggcggggaaaggtt 44053407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 12903207 - 12903325
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  12903207 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgatcgctatggcgagctgcgacgtgcaactcg 12903306  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  12903307 cgaggcggggaaaagttac 12903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 16239650 - 16239533
Alignment:
Q  3 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||    
T  16239650 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgctatggcgagctgcaacgtgcaactcgc 16239551  T
Q  103 gaggcggggaaaggttac 120  Q
    ||||||||||||||||||    
T  16239550 gaggcggggaaaggttac 16239533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 7089328 - 7089446
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  7089328 tcaactcaaaagtcaaaattacgaaatcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcg 7089427  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||| ||||||||| |||||    
T  7089428 cgaagcggggaaaagttac 7089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 20156947 - 20156841
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  20156947 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcgacgtgcaactcgcg 20156848  T
Q  104 aggcggg 110  Q
    |||||||    
T  20156847 aggcggg 20156841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 3097096 - 3097200
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  3097096 aactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 3097195  T
Q  104 aggcg 108  Q
    |||||    
T  3097196 aggcg 3097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 24029203 - 24029319
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  24029203 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctgatcgagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 24029302  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  24029303 cgaggcgaggaaaggtt 24029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15091358 - 15091467
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||| |||    
T  15091358 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcacctc 15091457  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  15091458 gcgaggcggg 15091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 3332284 - 3332396
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 105  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||||    
T  3332284 ctcaaaagtcaaaatcacgaaatcttgcatgctctctgatcaagctcgcgaggcgagttcaactactcgctatggcgagctgcaacgtgcaactcgcgag 3332383  T
Q  106 gcggggaaaggtt 118  Q
    ||| |||||||||    
T  3332384 gcgaggaaaggtt 3332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 15552275 - 15552382
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc-ctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||    
T  15552275 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagtctgttcgctatggcgagctgcgacgtgcaactc 15552374  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  15552375 gcgaggcg 15552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 22633872 - 22633756
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  |||||  ||||||| |||||| ||||||||||||    
T  22633872 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcactatggcaagctgcaacgtgcaactcg 22633773  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| | |||||||    
T  22633772 cgaggcgagaaaaggtt 22633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 17053493 - 17053599
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||    
T  17053493 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcg 17053592  T
Q  102 cgaggcg 108  Q
    |||||||    
T  17053593 cgaggcg 17053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16377182 - 16377073
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||  ||||||||||  || ||||||||||||||||||| |||||| |||||| ||||||||||||||| | || ||||||    
T  16377182 atcaactcaaaagtcaaaatcatgaaatcttgcaagctatctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactc 16377083  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  16377082 gcgaggcggg 16377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44928583 - 44928474
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||| |  |||||||||||||| |||||||||||    
T  44928583 atcaactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgttcactatggcgagctgcaacgtgcaactc 44928484  T
Q  101 gcgaggcggg 110  Q
    || |||||||    
T  44928483 gcaaggcggg 44928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 14052972 - 14052869
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || || |||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| |||||||||    
T  14052972 tcaactcaaaagtcaaaaatacgaa-tcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcg 14052874  T
Q  102 cgagg 106  Q
    |||||    
T  14052873 cgagg 14052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44102670 - 44102780
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||    
T  44102670 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctacggcgagctgcgacgtgcaac 44102768  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  44102769 tcgcgaggcggg 44102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12774459 - 12774569
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||||| | ||  ||||||||||| |||||| | ||||||||| |||| |||||||||||||||||||||||||||    
T  12774459 atcaactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgcgatggcgagttcatctgtttgctatggcgagctgcgacgtgcaac 12774557  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  12774558 tcgcgaggcggg 12774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14039110 - 14039197
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||||||||||||||||  ||||||||||  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||    
T  14039110 atcaactcaaaagtcaaaatcatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatgccgagctgc 14039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21815292 - 21815182
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||| | ||||||||| |||||| ||||||||||||| |||||||||||    
T  21815292 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaac 21815194  T
Q  99 tcgcgaggcggg 110  Q
    ||| ||||||||    
T  21815193 tcgtgaggcggg 21815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 16597107 - 16597225
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||| |||||| ||||||| ||| |||||||||| |||||||||| ||||||||||||||||||   || | |   ||||||||||| ||||||||||||    
T  16597107 tcaattcaaaaatcaaaattacagaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgtcgtggcgagctgcaacgtgcaactcg 16597206  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||| || ||||||    
T  16597207 cgaggcgggaaagggttac 16597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6190894 - 6191004
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||  |||| ||| ||  ||||||||||| |||||||| || |||||| || ||| |||||| ||||||||||||||||||    
T  6190894 atcaactcaaaagtcaaaatcatgaaat-ttggatagctctctggtcatgctcgctatggtgagttcatcagctcgctatgacgagctgcgacgtgcaac 6190992  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  6190993 tcgcgaggcggg 6191004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21818385 - 21818275
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| | |||| | ||||||||| |||||| ||||||||||||| |||||||||||    
T  21818385 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgatcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaac 21818287  T
Q  99 tcgcgaggcggg 110  Q
    ||| ||||||||    
T  21818286 tcgtgaggcggg 21818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7799158 - 7799222
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagtt 64  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  7799158 atcaactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtt 7799222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 13812468 - 13812408
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 62  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||    
T  13812468 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgtgaggcgag 13812408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 39705947 - 39705839
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||||||||    
T  39705947 tcaacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcg 39705848  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  39705847 cgaggcggg 39705839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 43198212 - 43198139
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  43198212 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 43198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 7799210 - 7799254
Alignment:
Q  74 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7799210 gctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 7799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 23374117 - 23374074
Alignment:
Q  77 atggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  23374117 atggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 23374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 13569971 - 13570078
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||     || | ||| |||||||||||||||||||||||    
T  13569971 tcaactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgttcgctgtggcgagctgcgacgtgcaactc 13570070  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  13570071 gcgaggcg 13570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 23843938 - 23844045
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | |||||||||||||||||||||||    
T  23843938 tcaactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgatgtggcgagctgcgacgtgcaactc 23844037  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  23844038 gcgaggcg 23844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 44676091 - 44676198
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||    
T  44676091 tcaactcaaaagtcaaaaatatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactc 44676190  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  44676191 gcgaggcg 44676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 46640018 - 46639925
Alignment:
Q  15 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | ||||| ||  |||||| ||||||||||||||| | ||||||||| |||||||    
T  46640018 caaaatcacaaaatcatgtttcctcactggtcaagctcgcgatggcga-ttgatctgctcgctatggcgagctgcaaggtgcaactcacgaggcg 46639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 13845001 - 13845109
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||||||||| || ||||| ||    |||| ||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||| |||    
T  13845001 tcaacttaaaagtcaaaattacgaaatcatgacagctctttggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaattcg 13845100  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  13845101 cgaggcggg 13845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 10314244 - 10314283
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10314244 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 10314283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 15121463 - 15121356
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||    ||| ||||||||||| |||||||| |||||||     || ||||| |||||||||||||| ||||||||    
T  15121463 tcaactcaaaagtcaaaaatacataattcaacatgctctctggtcatgctcgctatggcgagtaaggttgtttgctgtggcgagctgcgacttgcaactc 15121364  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  15121363 gcgaggcg 15121356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 8846889 - 8846922
Alignment:
Q  75 ctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||| |||||||||||||||||    
T  8846889 ctatggcgagctgcgaggtgcaactcgcgaggcg 8846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 53081693 - 53081652
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  53081693 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 53081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 12287726 - 12287686
Alignment:
Q  68 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  12287726 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 12287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13661 - 13780
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  13661 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactc 13760  T
Q  101 gcgaggcggggaaaggttac 120  Q
    |||| |||||||||||||||    
T  13761 gcgatgcggggaaaggttac 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20864 - 20981
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  20864 atcaactcaaaagtcaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 20963  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||| |||||||||||||    
T  20964 gcgaagcggggaaaggtt 20981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40372 - 40481
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  40372 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 40471  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  40472 gcgaggcggg 40481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 2312 - 2429
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  2312 atcaactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 2411  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  2412 gcgaggcggggaaaggtt 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 339611 - 339498
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  339611 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 339512  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||||||||||    
T  339511 gcgaggcggggaaa 339498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 71748 - 71864
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  71748 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 71847  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  71848 cgaggcgaggaaaggtt 71864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 6e-46; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23390156 - 23390039
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23390156 atcaactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 23390057  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  23390056 gcgaggcggggaaaggtt 23390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25421993 - 25422110
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| || ||||||||||||||||| |||||||||    
T  25421993 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctactcgctatggcgagctgcgatgtgcaactc 25422092  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  25422093 gcgaggcggggaaaggtt 25422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24494029 - 24494138
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||| | |||||||||    
T  24494029 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagctgcaaggtgcaactc 24494128  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  24494129 gcgaggcggg 24494138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 1096929 - 1097037
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||| | ||||||||||    
T  1096929 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtttatctgctcgctatggcgagctgcaaggtgcaactcg 1097028  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  1097029 cgaggcggg 1097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 20910471 - 20910363
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  20910471 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 20910372  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  20910371 cgaggcggg 20910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 22119852 - 22119736
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  22119852 tcaactcaaaagtcaaaatcacaaaattttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 22119753  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  22119752 cgaggcgaggaaaggtt 22119736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21985807 - 21985700
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||    
T  21985807 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcagctc 21985708  T
Q  101 gcgaggcg 108  Q
     |||||||    
T  21985707 tcgaggcg 21985700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25431855 - 25431972
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| | ||| || ||||||| |||||||||||||||||||    
T  25431855 atcaactcaaaagtcaaaatcacgaaatcttgcacgctctctggtcaagctcgctaggcgagtacatctactcgctatggagagctgcgacgtgcaactc 25431954  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||| || |||||||    
T  25431955 gcgaggcaggaaaaggtt 25431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 22075470 - 22075588
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||   || | || |||||||||||| ||||||||||||    
T  22075470 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcg 22075569  T
Q  102 cgaggcggggaaaggttac 120  Q
    | |||||||||||||||||    
T  22075570 caaggcggggaaaggttac 22075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9078413 - 9078518
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| | | |||||||||    
T  9078413 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctacaaggtgcaactc 9078512  T
Q  101 gcgagg 106  Q
    ||||||    
T  9078513 gcgagg 9078518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 21871230 - 21871114
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||    
T  21871230 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcg 21871131  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| || ||||||    
T  21871130 cgaggcgaggtaaggtt 21871114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 21875510 - 21875394
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||    
T  21875510 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctcttgtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcg 21875411  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| || ||||||    
T  21875410 cgaggcgaggtaaggtt 21875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24529682 - 24529787
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||| | |||||||||||||   |||||||||    
T  24529682 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgttatggcgagctgcagggtgcaactc 24529781  T
Q  101 gcgagg 106  Q
    ||||||    
T  24529782 gcgagg 24529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 19660496 - 19660380
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||||||||||||||||    
T  19660496 tcaactcaaaagtcaaaaatacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcg 19660397  T
Q  102 cgaggcggggaaaggtt 118  Q
     ||||||||||| ||||    
T  19660396 tgaggcggggaagggtt 19660380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11580905 - 11580795
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||    
T  11580905 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcaagctgcgacgtgcaac 11580807  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  11580806 tcgcgaggcggg 11580795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 22107043 - 22106937
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || |||| |||||| |||||||||| |||||||||||||||||| |||| | | | ||||||||||||||||||| ||||    
T  22107043 tcaactcaaaagtcaaaaatacgaaattttgcatgctctctggtctagctcgctaggcgagttcatctgttcgttgtggcgagctgcgacgtgcacctcg 22106944  T
Q  102 cgaggcg 108  Q
    |||||||    
T  22106943 cgaggcg 22106937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29916589 - 29916699
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||||| ||||||||| | |||| |||||||||||||||||||||||||    
T  29916589 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctatggtcatgctcgctatggcgagttcatttgctcgctatggcgagctgcgacgtgcaac 29916687  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  29916688 tcgcgaggcggg 29916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 8286512 - 8286452
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 62  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  8286512 tcaactcaaaagtcaaaaacacgaaatcttgcatgctctctggtcaagctcgctaggcgag 8286452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 24766996 - 24766885
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||    
T  24766996 tcaactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcg 24766902  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  24766901 cgaggcgaggaaaggtt 24766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 23201828 - 23201935
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  23201828 tcaactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 23201927  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  23201928 gcgaggcg 23201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 37724363 - 37724470
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| ||| |||||| ||| |||||| |||| |||||||| |||||||||   || | | | |||||||||| ||||||||||||    
T  37724363 tcaactcaaaagtcaaaattacagaatcttacatgctctctagtcatgctcgctatggcgagttcagttgttcgatgtggcgagctgtgacgtgcaactc 37724462  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  37724463 gcgaggcg 37724470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 21498641 - 21498560
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    |||||| ||||  |||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||| || |||||||    
T  21498641 ctctctagtcacactcgctaggcgagttaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcaggtaaaggtt 21498560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13095955 - 13096014
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 60  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13095955 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13096014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 31342562 - 31342669
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||| |||| ||| |  ||| |||||| |||| |||||||| ||||||||   || || ||| ||||||||||| |||||||||||    
T  31342562 tcaactcaaaagtcaaaaacacagaatttgacatgctctctagtcatgctcgctatggcgagttaagctactcgctgtggcgagctgcaacgtgcaactc 31342661  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  31342662 gcgaggcg 31342669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 21329119 - 21329046
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||| ||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21329119 ctctatggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22959193 - 22959085
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| | |||||||  ||| | ||||||||||||||| | |||||||    
T  22959193 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatgacgagttcaactgttcgctatggcgagctgcaatgtgcaac 22959095  T
Q  99 tcgcgaggcg 108  Q
    ||||||||||    
T  22959094 tcgcgaggcg 22959085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 8286457 - 8286422
Alignment:
Q  79 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 114  Q
    ||||||||||||||||||||||||||||||||||||    
T  8286457 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 8286422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13025771 - 13025830
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 60  Q
    |||||||||||| |||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13025771 atcaactcaaaattcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13025830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19669361 - 19669451
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcga 90  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||| | ||||||||| |||||| |||| ||||||||||||    
T  19669361 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgcaatggcgagttcatctgctcgctagggcgagctgcga 19669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 22144578 - 22144628
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 119  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||| ||||    
T  22144578 tgcttgctatggcgagctgcaaggtgcaactcgcgaggcgggtaaaagtta 22144628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 14079609 - 14079714
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | |||||||||||||||||||||||||    
T  14079609 aactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctacggcgagtaacattgttcgttgtggcgagctgcgacgtgcaactcgc 14079708  T
Q  103 gaggcg 108  Q
    ||||||    
T  14079709 gaggcg 14079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 26011658 - 26011585
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||| ||||||||    
T  26011658 ctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgtgaggcggg 26011585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 36154441 - 36154400
Alignment:
Q  69 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  36154441 tgctcgctatggcgagctgcgacatgcaactcgcgaggcggg 36154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 26742417 - 26742363
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 56  Q
    |||||||||||||||||| | || ||| || ||| ||||||||||||||||||||    
T  26742417 tcaactcaaaagtcaaaaactcagaattttacatgctctctggtcaagctcgcta 26742363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 21741164 - 21741116
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  21741164 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 21741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 22177787 - 22177696
Alignment:
Q  17 aaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||| ||  ||||| || ||||| ||||||| |||||||   |||||| ||||||||||||||| || |||||||| |||||||    
T  22177787 aaatcacaaaatcatgtttcctcactagtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcacgaggcg 22177696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 719 - 600
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||    
T  719 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcg 620  T
Q  102 cgaggcggggaaaggttacc 121  Q
    ||||||||||||| ||||||    
T  619 cgaggcggggaaaagttacc 600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 167649 - 167530
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||    
T  167649 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcg 167550  T
Q  102 cgaggcggggaaaggttacc 121  Q
    ||||||||||||| ||||||    
T  167549 cgaggcggggaaaagttacc 167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52373 - 52490
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||     
T  52373 atcaactcaaaagtcaaaatcaaaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacatgcaactt 52472  T
Q  101 gcgaggcggggaaaggtt 118  Q
    || |||||||||||||||    
T  52473 gcaaggcggggaaaggtt 52490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 13442717 - 13442832
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  13442717 actcaaaagtgaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcaa 13442816  T
Q  105 ggcggggaaaggttac 120  Q
    ||||||||||||||||    
T  13442817 ggcggggaaaggttac 13442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 20698106 - 20697993
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  20698106 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctggtcaagctcgctagacgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 20698007  T
Q  102 cgaggcggggaaag 115  Q
    ||||||||| ||||    
T  20698006 cgaggcgggaaaag 20697993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26687348 - 26687457
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  26687348 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactc 26687447  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  26687448 gcgaggcggg 26687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11424423 - 11424306
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||    
T  11424423 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactc 11424324  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||| ||||||||    
T  11424323 gcgaggcggagaaaggtt 11424306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17247946 - 17247837
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||    
T  17247946 atcaactcaaaagtcaaaatcacgaaatcttgcaacctctctggtcaagctcgctaggagagttcatctgttcgctatggcgagctgcgacgtgcaactc 17247847  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  17247846 gcgaggcggg 17247837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17499800 - 17499917
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||| |||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17499800 atcatctcaaaagtcaaaatcatgaaatcttgcattctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 17499899  T
Q  101 gcgaggcggggaaaggtt 118  Q
    | ||||||||||||||||    
T  17499900 gtgaggcggggaaaggtt 17499917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17488318 - 17488435
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||| ||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  17488318 atcatctcaaaagtcaaattcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactc 17488417  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  17488418 gcgaggcggggaaaggtt 17488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25476045 - 25475936
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| | || ||||||    
T  25476045 atcaactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctgcaaggtacaactc 25475946  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  25475945 gcgaggcggg 25475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 14666067 - 14666175
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| |||||||||||||    
T  14666067 tcaactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcg 14666166  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  14666167 cgaggcggg 14666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 14735580 - 14735688
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| |||||||||||||    
T  14735580 tcaactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcg 14735679  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  14735680 cgaggcggg 14735688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 53070359 - 53070249
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  53070359 atcaactcaaaagtcaaaatcacgaaatcttgcaagctccctggtcaagctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaact 53070260  T
Q  100 cgcgaggcggg 110  Q
    |||||||||||    
T  53070259 cgcgaggcggg 53070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18438995 - 18439104
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||   |||||||||    
T  18438995 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctactcgctatggcgagctgctgggtgcaactc 18439094  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  18439095 gcgaggcggg 18439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23083021 - 23082912
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||    
T  23083021 atcaactcaaaagtcaaaatcacaaaatctgacatgctctctggtcaagctcgctgggcgagttcatctactcgctatggcgagctgcgacgtgcaactc 23082922  T
Q  101 gcgaggcggg 110  Q
    || |||||||    
T  23082921 gcaaggcggg 23082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43842639 - 43842756
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||| | ||||||||||| |    
T  43842639 atcaactaaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagttacgacgtgcaaccc 43842738  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  43842739 gcgaggcggggaaaggtt 43842756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 184418 - 184318
Alignment:
Q  18 aatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 117  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  184418 aatcacgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggt 184319  T
Q  118 t 118  Q
    |    
T  184318 t 184318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 13209987 - 13209869
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || | || |||||||||||||||||||||||||    
T  13209987 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcg 13209888  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  13209887 cgaggcggggaaaagttac 13209869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 14179784 - 14179890
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  14179784 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 14179883  T
Q  102 cgaggcg 108  Q
    |||||||    
T  14179884 cgaggcg 14179890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 12852021 - 12851908
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  12852021 aactcaaaagtcaaaatcacgaaatcttgcatgctctcaggtcaagatcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 12851922  T
Q  104 aggcggggaaaggt 117  Q
    ||||| ||||||||    
T  12851921 aggcgaggaaaggt 12851908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14973315 - 14973424
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||| |||||| |||||||||||||||   |||||||||    
T  14973315 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcagggtgcaactc 14973414  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  14973415 gcgaggcggg 14973424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40213381 - 40213275
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||| |||||| ||||||||||||| | | ||| |||||    
T  40213381 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcactaggcgagttcatctgctcgctatggcgagctacaaggtgtaactc 40213282  T
Q  101 gcgaggc 107  Q
    |||||||    
T  40213281 gcgaggc 40213275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 30030290 - 30030406
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||  || || ||||||||||| ||| ||| |||||| |    
T  30030290 tcaactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctactcgctatggcgagttgcaacgcgcaacttg 30030389  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||||| |||||||    
T  30030390 cgaggcgggaaaaggtt 30030406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 16809847 - 16809953
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || |||||| |||| |||||| ||| |||||||||||||||||| |||  | ||||||||||||||||||||||||||||    
T  16809847 tcaactcaaaagtcaaaaatacgaaatctagcatgctctctagtctagctcgctaggcgagttcatctattcgctatggcgagctgcgacgtgcaactcg 16809946  T
Q  102 cgaggcg 108  Q
    |||||||    
T  16809947 cgaggcg 16809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 12399657 - 12399772
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||| ||||||| ||||||||||   || || | |||||||||||||||||||||||||    
T  12399657 tcaactcaaaagtcaaaattacaaaatctagcatgctctctggtctagctcgcgaggcgagttcaagtgttttccatggcgagctgcgacgtgcaactcg 12399756  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||| |||||||| ||||    
T  12399757 cga-gcggggaagggtt 12399772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14576493 - 14576386
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     |||| ||| |||||||||||  ||||||||||    
T  14576493 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtaggattgctcgctgtggcgagctgcatcgtgcaactc 14576394  T
Q  101 gcgaggcg 108  Q
    | ||||||    
T  14576393 gggaggcg 14576386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 14669222 - 14669304
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgag 84  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  14669222 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgag 14669304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14573049 - 14573156
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||     |||||| | |||||||||||  |||||||||     
T  14573049 atcaactcaaaagtcaaaaacacaaaatcttgcatgctctttggtcaagctcgctaggcgagtaggattgcttgttgtggcgagctgcatcgtgcaactt 14573148  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  14573149 gcgaggcg 14573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12933970 - 12933856
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||||||||||||    
T  12933970 atcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 12933871  T
Q  100 cgcgaggcggggaaa 114  Q
    ||||||||| |||||    
T  12933870 cgcgaggcgaggaaa 12933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23408890 - 23409003
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| || || |||||||| |||| |||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  23408890 tcaactcaaaagtcaaaattacgaattcttgcatgctctttggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 23408989  T
Q  101 gcgaggcggggaaa 114  Q
    |||||||| |||||    
T  23408990 gcgaggcgaggaaa 23409003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 12340214 - 12340321
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||     |||| ||| ||||||||| |||| || |||||    
T  12340214 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtagggttgctcgctgtggcgagctacgacatgtaactc 12340313  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  12340314 gcgaggcg 12340321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 15877488 - 15877381
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||| |||||||||||||||    
T  15877488 tcaactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagttgcgacgtgcaactc 15877389  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  15877388 gcgaggcg 15877381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1644343 - 1644235
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | |||||||||||||||||||||||||    
T  1644343 atcaactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgacgtgcaac 1644245  T
Q  99 tcgcgaggcg 108  Q
    ||||||||||    
T  1644244 tcgcgaggcg 1644235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 9513407 - 9513479
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9513407 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9513479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 9521382 - 9521454
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9521382 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9521454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 17247148 - 17247084
Alignment:
Q  46 caagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  17247148 caagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcggg 17247084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 4588439 - 4588368
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||||||  ||||||||||||||||||    
T  4588439 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcatcgtgcaactcgcgaggcg 4588368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16104241 - 16104351
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | || ||||||||| ||||||||||||    
T  16104241 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgcgatggcgagcggcgacgtgcaac 16104339  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  16104340 tcgcgaggcggg 16104351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 42386908 - 42386979
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||    
T  42386908 ctctctggtcacactcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 42386979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49389304 - 49389197
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| |||||||    
T  49389304 atcaactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgatgtgcaac 49389206  T
Q  99 tcgcgaggc 107  Q
    |||||||||    
T  49389205 tcgcgaggc 49389197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 15471386 - 15471497
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||| |||||||| || ||||| ||   | ||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||| ||||||    
T  15471386 tcaactcaaaggtcaaaattacgaaatcatgatgcttctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtggaactcg 15471485  T
Q  102 cgaggcggggaa 113  Q
    ||||||||||||    
T  15471486 cgaggcggggaa 15471497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 14234988 - 14235064
Alignment:
Q  38 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 114  Q
    ||||||||||  ||| ||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  14234988 tctctggtcacactcactaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 14235064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 14669367 - 14669427
Alignment:
Q  50 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  14669367 ctcgcgaggcgagttcaactactcgctatggcgagctgcgacgtgcaactcgcgaggcggg 14669427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16097791 - 16097899
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    |||| |||||| |||||||| ||||||||| || | | ||||||||||||||| | ||||||||    
T  16097791 atcaactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgctatggcgagttcatccgttcgctatggcgagctgcaaggtgcaact 16097890  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  16097891 cgcgaggcg 16097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 49667744 - 49667636
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||| |||| |||||||||    
T  49667744 atcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagttgcgtcgtgcaact 49667645  T
Q  100 cgcgaggcg 108  Q
    ||| |||||    
T  49667644 cgcaaggcg 49667636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 21837983 - 21838076
Alignment:
Q  15 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| | |||||||||||||||||    
T  21837983 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 21838076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 17524834 - 17524727
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||  |||  | ||| |||||| |||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  17524834 tcaactcaaaagtcaaaaatactgaattctacatgctctctagtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 17524735  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  17524734 gcgaggcg 17524727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 43927663 - 43927756
Alignment:
Q  15 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| |||| |||||||||| || ||||||||||||||||    
T  43927663 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctacggcgagctgcaacatgcaactcgcgaggcg 43927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12171777 - 12171669
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||| |||||||||||| || |||| ||| ||  ||||||||||| |||| ||| |||||||||  ||| | || |||||||||||||| |||||||    
T  12171777 atcaactaaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcactatggcgagttcaactgttcgcaatggcgagctgcgaggtgcaac 12171679  T
Q  99 tcgcgaggcg 108  Q
    ||||||||||    
T  12171678 tcgcgaggcg 12171669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 22109903 - 22109830
Alignment:
Q  35 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    ||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||||| | |  |||||||||||||    
T  22109903 tcctcactggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcaaggaacaactcgcgaggc 22109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 52523351 - 52523279
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  52523351 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 52523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 32308186 - 32308237
Alignment:
Q  57 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  32308186 ggcgagttcatctattcgctatggcgagctgcgaggtgcaactcgcgaggcg 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 321596 - 321567
Alignment:
Q  79 ggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||||||||||||||||||||    
T  321596 ggcgagctgcgacgtgcaactcgcgaggcg 321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 379353 - 379404
Alignment:
Q  156 tagtgtggcttagcaagacgtttaat---aaaaagggcaagattgtcatttc 204  Q
    ||||||||||||||||||| ||||||   |||||||||||||| ||||||||    
T  379353 tagtgtggcttagcaagacttttaataaaaaaaagggcaagatggtcatttc 379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 2050825 - 2050753
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||| ||||||||||    
T  2050825 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggg 2050753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17247180 - 17247147
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  17247180 atcaactcaaaagtcaaaatcacgaaatcttgca 17247147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 22791798 - 22791846
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 88  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  22791798 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 22791846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 803 - 920
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  803 atcaactcaaaagtcaaaatcacgaaatcttaaaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 902  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  903 gcgaggcggggaaaggtt 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3931 - 3985
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgct 55  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3931 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgct 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 3987 - 4027
Alignment:
Q  78 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3987 tggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 125043 - 125160
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||     
T  125043 atcaactcaaaagtcaaaatcaccaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactt 125142  T
Q  101 gcgaggcggggaaaggtt 118  Q
    | ||||||||||||||||    
T  125143 gtgaggcggggaaaggtt 125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 175226 - 175333
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  175226 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 175325  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  175326 gcgaggcg 175333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 63022 - 63130
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||| | || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | ||||||||    
T  63022 atcaactcaaaagtcaaatttacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaact 63121  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  63122 cgcgaggcg 63130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5781 - 5662
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  5781 atcaactcaaaagtaaaaaacacgaaatcttgcatgctctctggtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 5682  T
Q  101 gcgaggcggggaaaggttac 120  Q
    ||||||||||||||| ||||    
T  5681 gcgaggcggggaaagtttac 5662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15275 - 15161
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  15275 atcaactcaaaagtcaaaatcacgatatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtacaactc 15176  T
Q  101 gcgaggcggggaaag 115  Q
    |||||||||| ||||    
T  15175 gcgaggcgggtaaag 15161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 23286312 - 23286430
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  23286312 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaacgtgcaactcg 23286411  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  23286412 cgaggcggggaaaagttac 23286430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 23654069 - 23653951
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  23654069 tcaactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcg 23653970  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||||||| |||||    
T  23653969 cgaggcggggaaaagttac 23653951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23660483 - 23660592
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  23660483 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 23660582  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  23660583 gcgaggcggg 23660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27754036 - 27754153
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||  |||||| |||||| ||||||||||||||| |||||||||||    
T  27754036 atcaactcaaaagtcaaaatcacgaaatcttgcatgctatctggtcaagctcgctagcagagttcatctgctcgctatggcgagctgcaacgtgcaactc 27754135  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  27754136 gcgaggcggggaaaggtt 27754153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 28291961 - 28291857
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  28291961 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 28291862  T
Q  102 cgagg 106  Q
    |||||    
T  28291861 cgagg 28291857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 298475 - 298369
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  ||||| ||||||||||| ||||||||||||||    
T  298475 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagttcagctgctcgctatggcgagttgcgacgtgcaact 298376  T
Q  100 cgcgagg 106  Q
    |||||||    
T  298375 cgcgagg 298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23076901 - 23077016
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||| || |||||||||||| ||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||    
T  23076901 atcaacttaatagtcaaaatcacgaaatcttgcatgctctgt--tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcatctc 23076998  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  23076999 gcgaggcggggaaaggtt 23077016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 23060817 - 23060908
Alignment:
Q  27 atcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23060817 atcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaacccgcgaggtggggaaaggtt 23060908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 20309556 - 20309662
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | | ||||||||||||||| ||||||||||    
T  20309556 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgatatggcgagctgcgatgtgcaactcg 20309655  T
Q  102 cgaggcg 108  Q
    |||||||    
T  20309656 cgaggcg 20309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22337576 - 22337685
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||   ||||| |||    
T  22337576 atcaactcaaaagtcagaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcatctc 22337675  T
Q  101 gcgaggcggg 110  Q
     |||||||||    
T  22337676 acgaggcggg 22337685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22730893 - 22730776
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||||||| |||| |||||| |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| ||| |||||||||    
T  22730893 atcaactcaaaagttaaaatcacgaaatattgcatgctctctagtcgagctcgctaggccagttcatctgctcgctatggcgagctacgatgtgcaactc 22730794  T
Q  101 gcgaggcggggaaaggtt 118  Q
    || ||||||||| |||||    
T  22730793 gcaaggcggggagaggtt 22730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22737840 - 22737735
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||| |||||||| |||||| |||| |||||||| ||||||| |||||    
T  22737840 atcaactcaaaagtcaaaatcacgaaatcttgcatgatctctagtcaagctcgctacgcgagttcatctgctcgctagggcgagcttcgacgtggaactc 22737741  T
Q  101 gcgagg 106  Q
    ||||||    
T  22737740 gcgagg 22737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32451589 - 32451479
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  32451589 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgcttgctatggcgagctgcgtcgtgcaac 32451491  T
Q  99 tcgcgaggcggg 110  Q
    ||||||||||||    
T  32451490 tcgcgaggcggg 32451479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 37783 - 37680
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||||||||  || |||| |||||| || ||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||| ||||    
T  37783 actcaaaagtcaaaaatacgaaattttgcatgctttctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaacttgcga 37684  T
Q  105 ggcg 108  Q
    ||||    
T  37683 ggcg 37680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 23100890 - 23100785
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||| ||| |||| |||||||||   || | ||| |||| ||||||||||||||||||    
T  23100890 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgcttgctatggcgagttcagttgttcgctgtggctagctgcgacgtgcaactc 23100791  T
Q  101 gcgagg 106  Q
    ||||||    
T  23100790 gcgagg 23100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 22740620 - 22740513
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  22740620 tcaactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgctgtggcgagctgcgacgtgcaactc 22740521  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  22740520 gcgaggcg 22740513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 22758375 - 22758268
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | | | |||||||||||||||||||||||    
T  22758375 tcaactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgatgtggcgagctgcgacgtgcaactc 22758276  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  22758275 gcgaggcg 22758268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 40621833 - 40621762
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||||||||||   || | | | |||||||||||||||||||||||||||||||    
T  40621833 ctctctggtcaagctcgctaggcgagttcagttgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 40621762  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 7679792 - 7679866
Alignment:
Q  36 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  7679792 cctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgcgaggcggg 7679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 24658099 - 24658213
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  ||| |||    ||| |||||| ||| ||||||||||||||||||  ||| | |   ||||||||||| |||||||||| |    
T  24658099 tcaactcaaaagtcaaaaatacagaattcaacatgctctctagtctagctcgctaggcgagttcaactgttcgtcgtggcgagctgcaacgtgcaacttg 24658198  T
Q  102 cgaggcggggaaagg 116  Q
    |||||||||||||||    
T  24658199 cgaggcggggaaagg 24658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22133877 - 22133769
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||  || |||||| | ||  ||||||||||| |||||||| ||||||||| |||| | |||| | ||||||||||||||||||    
T  22133877 atcaactcaaaagtcaaaagtacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcatctgttcgctacgacgagctgcgacgtgcaac 22133779  T
Q  99 tcgcgaggcg 108  Q
    |||| |||||    
T  22133778 tcgcaaggcg 22133769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 23038541 - 23038599
Alignment:
Q  49 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    ||||||||||||||| | |||||| | | ||||||||||| ||||||||||||||||||    
T  23038541 gctcgctaggcgagtacatctgctcgttgtggcgagctgcaacgtgcaactcgcgaggc 23038599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22811594 - 22811488
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||||| ||| |||| |||||||     |||| ||| ||||||||| |||| || |||||    
T  22811594 tcaactcaaaagtcaaaattacaaaatttaacatgctctctggtcatgcttgctatggcgagtaagattgctcgctgtggcgagctacgacttgtaactc 22811495  T
Q  101 gcgaggc 107  Q
    |||||||    
T  22811494 gcgaggc 22811488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 25176304 - 25176410
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||| |||||||| || ||||| ||    | |||||||||  ||||||||||||||   |||||| ||||||| ||||||| | |||||||||     
T  25176304 tcaactcaaaggtcaaaattacgaaatcatgacaacactctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactca 25176403  T
Q  102 cgaggcg 108  Q
    |||||||    
T  25176404 cgaggcg 25176410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 20519711 - 20519670
Alignment:
Q  68 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 109  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  20519711 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 20519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 107
Target Start/End: Complemental strand, 22798709 - 22798680
Alignment:
Q  78 tggcgagctgcgacgtgcaactcgcgaggc 107  Q
    ||||||||||||||||||||||||||||||    
T  22798709 tggcgagctgcgacgtgcaactcgcgaggc 22798680  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 22412648 - 22412612
Alignment:
Q  74 gctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||||| | |||||||||||||||||||    
T  22412648 gctatggcgagctgcaaggtgcaactcgcgaggcggg 22412612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 23705890 - 23705830
Alignment:
Q  50 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||| |||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  23705890 ctcgataggcgagtgaatctgctcgttatggcgagctgcaaagtgcaactcgcgaggcggg 23705830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1116 - 999
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  1116 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactc 1017  T
Q  101 gcgaggcggggaaaggtt 118  Q
     |||||||||||||||||    
T  1016 acgaggcggggaaaggtt 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1738 - 1621
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||    
T  1738 atcaactcaaaagtcaaaatcacagaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactc 1639  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||||||||| |||||||    
T  1638 gcgaggcgggaaaaggtt 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13553 - 13670
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||    
T  13553 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctattgcgagctgcgatgtgcaactc 13652  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||| ||||||    
T  13653 gcgaggcgggggaaggtt 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 34582 - 34688
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||||||||||||    
T  34582 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcg 34681  T
Q  102 cgaggcg 108  Q
    |||||||    
T  34682 cgaggcg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20086 - 19969
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||    
T  20086 atcaactcaaaagtcaaattcacgaaatcttgcatgctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcgacatgcaactc 19987  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||||||| |||||||||    
T  19986 gcgaggcgaggaaaggtt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 65453 - 65346
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  |||||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  65453 tcaactcaaaagtcaaaactacaaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 65354  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  65353 gcgaggcg 65346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 21352 - 21464
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||    
T  21352 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctcctcgctatggcgagctgcaacgtgcaactcg 21451  T
Q  102 cgaggcggggaaa 114  Q
    |||||||||||||    
T  21452 cgaggcggggaaa 21464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 17665 - 17559
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  17665 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcg 17566  T
Q  104 aggcggg 110  Q
    |||||||    
T  17565 aggcggg 17559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16875 - 16761
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||| |||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  16875 atcaactcgaaagtcaaaaacaagaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactc 16776  T
Q  101 gcgaggcggggaaag 115  Q
    |||||||||||||||    
T  16775 gcgaggcggggaaag 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 79021 - 78905
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||| ||||||| ||||||||||   || | || |||| ||||||| ||||||||||||    
T  79021 tcaactcaaaagtcagaattacaaaatcttgcatgctctctggtctagctcgcgaggcgagttcaagtgttcgccatggggagctgcaacgtgcaactcg 78922  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||| |||||||||||||    
T  78921 cgatgcggggaaaggtt 78905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 365 - 474
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||| | |||||||||    
T  365 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggggagttcatctgctcgctatggcgagctgcaaggtgcaactc 464  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  465 gcgaggcggg 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 673 - 556
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||| || ||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  673 atcaactcgaaggtcaaaatcacaaaatcttacaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 574  T
Q  101 gcgaggcggggaaaggtt 118  Q
    || ||| |||||||||||    
T  573 gcaaggtggggaaaggtt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 13267 - 13150
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||     
T  13267 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggagagttcatctgctcgctgtggcgagctgcgacgtgcaactca 13168  T
Q  102 cgaggcggggaaaggtta 119  Q
    ||||||||||||| ||||    
T  13167 cgaggcggggaaaagtta 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 387 - 492
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  387 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 486  T
Q  102 cgaggc 107  Q
    ||||||    
T  487 cgaggc 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 5163 - 5268
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  5163 tcaactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 5262  T
Q  102 cgaggc 107  Q
    ||||||    
T  5263 cgaggc 5268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18618 - 18509
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| |||||    
T  18618 atcatctcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcaacgtgaaactc 18519  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  18518 gcgaggcggg 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4969 - 5082
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  4969 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 5068  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||||||||||    
T  5069 gcgaggcggggaaa 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12551 - 12664
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  12551 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 12650  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||||||||||    
T  12651 gcgaggcggggaaa 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22503 - 22616
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  22503 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 22602  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||||||||||    
T  22603 gcgaggcggggaaa 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25725 - 25608
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| ||  ||||||||||  |||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  25725 atcaactcaaaagtcaaaaacatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctactcgctatggcgagctgcgacgtgcaactc 25626  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  25625 gcgaggcggggaaaggtt 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33154 - 33048
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  33154 atcaactcaaaagtgaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactc 33055  T
Q  101 gcgaggc 107  Q
    |||||||    
T  33054 gcgaggc 33048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10619 - 10732
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||    
T  10619 atcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcaagttcatctgctcgctatggcgagctgcaaggtgcaactc 10718  T
Q  101 gcgaggcggggaaa 114  Q
    ||||||||||||||    
T  10719 gcgaggcggggaaa 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23962 - 23856
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||    
T  23962 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatccgctcgctatggcgagctgcgacgtgcaactc 23863  T
Q  101 gcgaggc 107  Q
    |||||||    
T  23862 gcgaggc 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 622 - 513
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||   |||||||||    
T  622 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgacctgcagggtgcaactc 523  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  522 gcgaggcggg 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 8149 - 8044
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    |||||| || |||||||||| ||||||||||  |||||||||||  ||||||| |||||||     |||| ||||||||||||||||| |||||||||||    
T  8149 aactcacaactcaaaatcacgaaatcttgcaagctctctggtcagactcgctacggcgagtaaacttgctcgctatggcgagctgcgaagtgcaactcgc 8050  T
Q  103 gaggcg 108  Q
    ||||||    
T  8049 gaggcg 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39591 - 39474
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||  ||||| ||||    
T  39591 atcaactcaaaagtcaaaatcatgaaatctggcatgctctctggtcaagctcgcgaggcgagttcatctgctcgctatggcgagctgcatcgtgctactc 39492  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||||||||||||    
T  39491 gcgaggcggggaaaggtt 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40317 - 40422
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| | |||||| |||||||| ||||||   |||||||||    
T  40317 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagtacatctgctcgctatggctagctgcagggtgcaactc 40416  T
Q  101 gcgagg 106  Q
    ||||||    
T  40417 gcgagg 40422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 24308 - 24193
Alignment:
Q  4 aactcaaaagtcaaaa-tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  24308 aactcaaaagtcaaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 24209  T
Q  103 gaggcggggaaaggtt 118  Q
    |||||| |||||||||    
T  24208 gaggcgaggaaaggtt 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14938 - 15057
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || |||| |||||||||||| |||||||||||    
T  14938 atcaactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgtttgccatggcgagctgcaacgtgcaactc 15037  T
Q  101 gcgaggcggggaaaggttac 120  Q
    |||||||||||||| |||||    
T  15038 gcgaggcggggaaaagttac 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 4801 - 4695
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  4801 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 4702  T
Q  102 cgaggcg 108  Q
    |||||||    
T  4701 cgaggcg 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8936 - 9022
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctg 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8936 atcaactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctg 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10605 - 10711
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  10605 atcaactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactc 10704  T
Q  101 gcgaggc 107  Q
    |||||||    
T  10705 gcgaggc 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6488 - 6371
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||| |||||||||||||||||  ||||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  6488 atcatctcaaaagtcaaaatcatgaaatcttgcattctctatagtcaagctcgctaggcgagttcatctgctcgctatggcgaggtgcgacgtgcaactc 6389  T
Q  101 gcgaggcggggaaaggtt 118  Q
    ||||||||| | ||||||    
T  6388 gcgaggcggagcaaggtt 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8193 - 8076
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| || ||||||  |||||||||||||||| ||||||||     
T  8193 atcaactcaaaagtcaaaatcacgaaatcttgcatgctctttggtcaagctcgctaggcgagctcatctgctccctatggcgagctgcgatgtgcaactt 8094  T
Q  101 gcgaggcggggaaaggtt 118  Q
    |||||| ||| |||||||    
T  8093 gcgaggtgggaaaaggtt 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 2744 - 2636
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||  |||||||||||||| | ||||||||||    
T  2744 tcaactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcaaggtgcaactcg 2645  T
Q  102 cgaggcggg 110  Q
     ||||||||    
T  2644 tgaggcggg 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 489 - 605
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  489 tcaattcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcg 588  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||  | |||||||||    
T  589 cgagaagaggaaaggtt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 79991 - 79887
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||    
T  79991 tcaactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaacttctcgctatggcgagctgcaacgtgcaactcg 79892  T
Q  102 cgagg 106  Q
    |||||    
T  79891 cgagg 79887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16119 - 16238
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||    
T  16119 atcaactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaattgttcgccatggcgagctgcaacgtgcaactc 16218  T
Q  101 gcgaggcggggaaaggttac 120  Q
    |||||||||||||| |||||    
T  16219 gcgaggcggggaaaagttac 16238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 1799 - 1906
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||  |||||||| |||||||||   || |  || ||||||| |||||||||||||||    
T  1799 tcaactcaaaagtcaaaattacgaaatcttacatgctctctggtcctgctcgctatggcgagttcaattgttcactgtggcgagttgcgacgtgcaactc 1898  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  1899 gcgaggcg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 2403 - 2521
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||  |||||    
T  2403 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgctcgctatggcgagttgcgaggtgttactcg 2502  T
Q  102 cgaggcggggaaaggttac 120  Q
    ||||||||| |||||||||    
T  2503 cgaggcgggaaaaggttac 2521  T

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Target: scaffold0351 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 16730 - 16836
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  16730 tcaacttaaaagtcaaaagtacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 16829  T
Q  102 cgaggcg 108  Q
    |||||||    
T  16830 cgaggcg 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 16881 - 16911
Alignment:
Q  78 tggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||||||||||||    
T  16881 tggcgagctgcgacgtgcaactcgcgaggcg 16911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20573 - 20682
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||   |||||||||    
T  20573 atcaactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatccgctcgctatggcgagctgcagggtgcaactc 20672  T
Q  101 gcgaggcggg 110  Q
     |||||||||    
T  20673 acgaggcggg 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 4985 - 5093
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||| ||| |||| ||||||||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | ||||||||||    
T  4985 tcaactcaaaagttaaagtcacgaaatcttgcaagctctctggtcaagatcgctaggcgagttcatctgctcgctatggcgagctgcaatgtgcaactcg 5084  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  5085 cgaggcggg 5093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 722 - 616
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || |||||||| || |||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||||     
T  722 tcaactcaaaagtcaaaaatacgaaatcttgaatgctctctggtctagctcgctaggcgagttcatatgtttgctatggcgagctgcgacgtgcaactca 623  T
Q  102 cgaggcg 108  Q
    |||||||    
T  622 cgaggcg 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 10096 - 9990
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||| |||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||    
T  10096 tcaattcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcg 9997  T
Q  102 cgaggcg 108  Q
    |||||||    
T  9996 cgaggcg 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 46390 - 46500
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  46390 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 46489  T
Q  105 ggcggggaaag 115  Q
    |||||| ||||    
T  46490 ggcgggtaaag 46500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 32615 - 32510
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  32615 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 32516  T
Q  105 ggcggg 110  Q
    ||||||    
T  32515 ggcggg 32510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16547 - 16656
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||||||   ||||||||||| |||||| ||||||||||||||| || ||| | |||| | |||||||||||||   ||||||||     
T  16547 atcaactcaaaagtcaaaatcttgaaatcttgcatgctctctcgtcaagctcgctaggtgatttcatttgctcgttatggcgagctgcatggtgcaactt 16646  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  16647 gcgaggcggg 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 13946 - 14051
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||| |||||||||    
T  13946 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcaagttcatctgttcgctatggcgagctgcgacatgcaactcg 14045  T
Q  102 cgaggc 107  Q
    ||||||    
T  14046 cgaggc 14051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 17383 - 17267
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||  |  | || |||||||||||| ||||||||||||    
T  17383 tcaactcaaaagtcaaaattacaaaatcttgcatgctctcttgtctagctcgctaggcgagttccagttttcgccatggcgagctgcaacgtgcaactcg 17284  T
Q  102 cgaggcggggaaaggtt 118  Q
    |||| ||||||| ||||    
T  17283 cgagacggggaagggtt 17267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 10372 - 10488
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||| |||||| ||||||||||  || || |||||||| |||||| ||||||||||||    
T  10372 tcaactcaaaagtcaaaatcacaaaatcttacatgctctctagtcaggctcgcgaggcgagttcaactactcgctatggcaagctgcaacgtgcaactcg 10471  T
Q  102 cgaggcggggaaaggtt 118  Q
     |||||| |||||||||    
T  10472 tgaggcgaggaaaggtt 10488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 15089 - 14981
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||| |||||||| ||||||||||| |||||| ||||||||||| || |||||||  ||||| |||||||| |||||| ||||||||||||    
T  15089 tcaactcaaaagtgaaaatcacgaaatcttgcatgctctctagtcaagctcgcgagacgagttcaactgctcgctatggcaagctgcaacgtgcaactcg 14990  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  14989 cgaggcggg 14981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 10931 - 10825
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||| |||    
T  10931 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacttgcaattcg 10832  T
Q  102 cgaggcg 108  Q
    | |||||    
T  10831 caaggcg 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 5299 - 5417
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||| ||||||| ||||||||||   || | || ||||||||||||  |||||||||||    
T  5299 tcaactcaaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgcaaggcgagttcaagtgttcgccatggcgagctgcaccgtgcaactcg 5398  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||| ||||||||||||    
T  5399 cgaggctgggaaaggttac 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 2104 - 1986
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||   || | ||  |||| |||||| ||||||||||||    
T  2104 tcaactcaacagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggcgagttcaagtgttcgccgtggcaagctgcaacgtgcaactcg 2005  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  2004 cgaggcggggaaaggttac 1986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 47437 - 47543
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||||| |  || ||||||||||| |||||||||| |||||||||||||||||| | || | ||||||||||||||| ||||||||||||    
T  47437 tcaactcaaaagtcaacaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatttgttcgctatggcgagctgcaacgtgcaactcg 47536  T
Q  102 cgaggcg 108  Q
    |||||||    
T  47537 cgaggcg 47543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 253 - 373
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||| ||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||    
T  253 atcaactcaaaagtctaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctaaggcgagctgcgacgtgcaac 351  T
Q  99 tcgcgaggcggggaaaggttac 120  Q
    |||||||||||||||| |||||    
T  352 tcgcgaggcggggaaaagttac 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16259 - 16150
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||||||| |||||||||   |||| |||||||||||||||||| ||||| |||||| |||||||||| |||| | || ||||||    
T  16259 atcaactcaaaagtcaaaatcacgaaatcttgctagctctgtggtcaagctcgctaggcaagttcatctgctcgctatggcgatctgcaaggtacaactc 16160  T
Q  101 gcgaggcggg 110  Q
    ||||||||||    
T  16159 gcgaggcggg 16150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 12464 - 12360
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 105  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  || || ||||||||||| ||||||||| | ||||||||    
T  12464 ctcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactactcgctatggcgagttgcgacgtgaagctcgcgag 12365  T
Q  106 gcggg 110  Q
    |||||    
T  12364 gcggg 12360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17241 - 17351
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  17241 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaac 17339  T
Q  99 tcgcgaggcggg 110  Q
    ||| ||||||||    
T  17340 tcgtgaggcggg 17351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 28939 - 28821
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||   || | ||  ||||||||||| ||||||| ||||    
T  28939 tcaacccaaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggtgagttcaagtgttcgccgtggcgagctgcaacgtgcacctcg 28840  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  28839 cgaggcggggaaaggttac 28821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 7641 - 7572
Alignment:
Q  41 ctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| |   |||||||||||||||||||    
T  7641 ctggtcatgctcgctaggcaagttcatctgctcgctatggcgagctacatggtgcaactcgcgaggcggg 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 15135 - 15029
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| || | | || |||| ||||||||||||||||||||    
T  15135 tcaacttaaaagtcaaaaatacgaaatcttgcatgctctctggtccagctcgctaggcgagttcatcagttcgcgatggtgagctgcgacgtgcaactcg 15036  T
Q  102 cgaggcg 108  Q
    |||||||    
T  15035 cgaggcg 15029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 32935 - 32829
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||||||||| |||||||| ||||||||| || | | |  ||||| |||||||||||||||||||    
T  32935 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgcttggcgagttcatcagttcgagatggctagctgcgacgtgcaactcg 32836  T
Q  102 cgaggcg 108  Q
    |||||||    
T  32835 cgaggcg 32829  T

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Target: scaffold0113 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 32515 - 32633
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| |||| ||||| ||||||||||||||||||   || |  |  ||||||||||| ||||||||||||    
T  32515 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctttggtctagctcgctaggcgagttcaagtgttcaccgtggcgagctgcaacgtgcaactcg 32614  T
Q  102 cgaggcggggaaaggttac 120  Q
    |||||||||||||||||||    
T  32615 cgaggcggggaaaggttac 32633  T

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Target: scaffold0555 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 1041 - 1146
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||||||||    
T  1041 tcaactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcaactcg 1140  T
Q  102 cgaggc 107  Q
    ||||||    
T  1141 cgaggc 1146  T

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Target: scaffold0555; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 10192 - 10108
Alignment:
Q  37 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 120  Q
    |||||||||||  ||||| | ||||||||| |||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  10192 ctctctggtcacactcgcgatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcgaggaaaagttac 10108  T

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Target: scaffold0364 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 17244 - 17171
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  17244 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 17171  T

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Target: scaffold0145 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39220 - 39330
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||  ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | ||||||           |||||||||||||||||    
T  39220 atcaacttcaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgct----------cgctgcgacgtgcaactc 39309  T
Q  101 gcgaggcggggaaaggttacc 121  Q
    |||||||||||||||||||||    
T  39310 gcgaggcggggaaaggttacc 39330  T

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Target: scaffold0309 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 7061 - 7168
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||  |  ||||||||| | |||||||||| ||||||||||||||||| | ||||| ||||||||||| ||||| |||  |||||    
T  7061 tcaactcaaaagtcaaaaatatgaaatcttgcgtgctctctggtctagctcgctaggcgagtt-cactgctcgctatggcgagttgcgaggtgttactcg 7159  T
Q  102 cgaggcggg 110  Q
    |||||||||    
T  7160 cgaggcggg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28469 - 28361
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| ||||||||||    
T  28469 atcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaacgtgcaact 28370  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  28369 cgcgaggcg 28361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 1744 - 1844
Alignment:
Q  9 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  1744 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 1843  T
Q  108 g 108  Q
    |    
T  1844 g 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 7721 - 7821
Alignment:
Q  9 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 107  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  7721 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 7820  T
Q  108 g 108  Q
    |    
T  7821 g 7821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 16109 - 16213
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||| |||||||||||||  || |||||||| || ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||    
T  16109 tcaattcaaaagtcaaaaatacgaaatcttggatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 16208  T
Q  101 gcgag 105  Q
    |||||    
T  16209 gcgag 16213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12389 - 12499
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||| ||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||||||    
T  12389 atcaattcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgggctgcgacgtgcaac 12487  T
Q  99 tcgcgaggcggg 110  Q
    ||  ||||||||    
T  12488 tcatgaggcggg 12499  T

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Target: scaffold0075 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 7953 - 7890
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 65  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||    
T  7953 tcaactcaaaagtcaaaatcacaaaatcttgcatgctctctagtcaggctcgcgaggcgagttc 7890  T

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Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 51544 - 51438
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    ||||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| |||||||||  ||||| ||||| | |||||||||||||||||    
T  51544 atcaactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcagctgctcgctatcgtgagctgcgacgtgcaac 51446  T
Q  99 tcgcgagg 106  Q
    ||||||||    
T  51445 tcgcgagg 51438  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 33033 - 33105
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  33033 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 33105  T

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Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 70255 - 70362
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||| |||||||| || |||||    || | ||| |||||||||||||||||||||||    
T  70255 tcaactcaaaagtcaaaactataaaatcttgcatgctctctggtcatgctcgctatggtgagtttagttgttcgctgtggcgagctgcgacgtgcaactc 70354  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  70355 gcgaggcg 70362  T

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Target: scaffold0810 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3393 - 3503
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||| | |    ||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||| ||||||||    
T  3393 atcaactcaaaagtcaaaattacgaaatatggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagttgcgaggtgcaact 3492  T
Q  100 cgcgaggcggg 110  Q
    ||| |||||||    
T  3493 cgcaaggcggg 3503  T

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Target: scaffold0628 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 2427 - 2353
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 111  Q
    |||||||||||  |||||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||    
T  2427 ctctctggtcatactcgctaggcgaattcatctgttcgcaatggcgagctgcgacgtgcaactcgcgaggcgggg 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6997 - 7103
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||  ||||||||    
T  6997 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcggggtgcaact 7096  T
Q  100 cgcgagg 106  Q
    |||||||    
T  7097 cgcgagg 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 190939 - 190833
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  190939 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 190840  T
Q  104 aggcggg 110  Q
    |||||||    
T  190839 aggcggg 190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 192642 - 192536
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  192642 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 192543  T
Q  104 aggcggg 110  Q
    |||||||    
T  192542 aggcggg 192536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2304 - 2196
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||    
T  2304 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaac 2206  T
Q  99 tcgcgaggcg 108  Q
    ||||||||||    
T  2205 tcgcgaggcg 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29001 - 29054
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg 58  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  29001 actcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctagg 29054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1961 - 1854
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||  || |||| ||| ||  ||||| ||||| ||||||||||||||||| |||  | ||||||||||||| ||||||||||||    
T  1961 atcaactcaaaagtcaaaaatacgaaat-ttggatagctctcaggtcatgctcgctaggcgagttcatctattcgctatggcgagctacgacgtgcaact 1863  T
Q  100 cgcgaggcg 108  Q
    |||||||||    
T  1862 cgcgaggcg 1854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 36051 - 35935
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || |||||  |  | ||| |||||  |||||||||||||||| | |||||| ||| ||||||||||| | ||||||||||    
T  36051 tcaactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggcgagtacatctgctcgctgtggcgagctgcaaagtgcaactcg 35952  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| || ||||||    
T  35951 cgaggcgagggaaggtt 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 9493 - 9382
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||    
T  9493 tcaactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcg 9399  T
Q  102 cgaggcggggaaaggtt 118  Q
    ||||||| |||||||||    
T  9398 cgaggcgaggaaaggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7272 - 7378
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||| ||||||| | ||||||||    
T  7272 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggagagctgcaaggtgcaact 7371  T
Q  100 cgcgagg 106  Q
    |||||||    
T  7372 cgcgagg 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 8513 - 8586
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||  ||||||||    
T  8513 ctctctggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcatgaggcggg 8586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19727 - 19837
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    ||||||||| |||||||||| ||||||||| |    ||||||||||| |||||| | | ||| ||| |||| | ||||||||||||||||| ||||||||    
T  19727 atcaactcagaagtcaaaattacaaaatctagatagctctctggtcatgctcgcaatgacgaattcatctgttcgctatggcgagctgcgaggtgcaact 19826  T
Q  100 cgcgaggcggg 110  Q
    |||||||||||    
T  19827 cgcgaggcggg 19837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 19308 - 19370
Alignment:
Q  56 aggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 118  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  19308 aggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 19370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 101855 - 101965
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||| ||||| || ||||||   |  ||||||||||| |||| ||| ||||||||| || | | ||||||||| ||||||||||||||||    
T  101855 atcaactcaaaagtaaaaattacgaaatctgaaaagctctctggtcatgctcactatggcgagttcatcagttcgctatggcgtgctgcgacgtgcaact 101954  T
Q  100 cgcgaggcggg 110  Q
    |||||||||||    
T  101955 cgcgaggcggg 101965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 130368 - 130469
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 99  Q
    |||||||||||||||||||| || |||||| |    ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||    
T  130368 atcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgaggtgcaact 130467  T
Q  100 cg 101  Q
    ||    
T  130468 cg 130469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 15860 - 15967
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||| ||||||    
T  15860 tcaactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgttcaactc 15959  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  15960 gcgaggcg 15967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 16781 - 16674
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||||||||||| |||| |||  | ||| ||||||||||| |||||||| |||||||     |||||||||||||||||| |||| || |||||    
T  16781 tcaactcaaaagtcaaaaacacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgcttgctatggcgagctacgacttgtaactc 16682  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  16681 gcgaggcg 16674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 161146 - 161260
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaac 98  Q
    |||||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||   |||||||    
T  161146 atcaactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcatggtgcaac 161244  T
Q  99 tcgcgaggcggggaaa 114  Q
    | |||||||| |||||    
T  161245 tagcgaggcgaggaaa 161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 1 - 55
Alignment:
Q  54 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||||||||||    
T  1 ctaggcgagatcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 1 - 54
Alignment:
Q  12 agtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 65  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  1 agtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctcggcgagttc 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 1923 - 1850
Alignment:
Q  37 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    |||||||||||  ||||||||||||||   |||||| |||||||||| |||| | |||||||||||||||||||    
T  1923 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgaactgcaaggtgcaactcgcgaggcggg 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 52032 - 52136
Alignment:
Q  4 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    ||||||||||| ||||  || ||||||||||  ||| ||||||| |||||||| |||||| || |||| | |||||||||| ||||||||||||||||||    
T  52032 aactcaaaagtaaaaaatacgaaatcttgcaagctc-ctggtcatgctcgctatggcgagctcatctgttcgctatggcgatctgcgacgtgcaactcgc 52130  T
Q  103 gaggcg 108  Q
     |||||    
T  52131 taggcg 52136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 8297 - 8369
Alignment:
Q  36 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | || ||||||||||||||    
T  8297 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtccaactcgcgaggcg 8369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 13450 - 13510
Alignment:
Q  50 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  13450 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 13510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 29877 - 29771
Alignment:
Q  3 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     |||| |||||||||||||||   ||||||||||    
T  29877 caactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctcgctatggcgagctgcattgtgcaactcg 29778  T
Q  102 cgaggcg 108  Q
    |||||||    
T  29777 cgaggcg 29771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 41873 - 41767
Alignment:
Q  3 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     ||||| || |||||||||||   ||||||||||    
T  41873 caactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctttctttggcgagctgcattgtgcaactcg 41774  T
Q  102 cgaggcg 108  Q
    |||||||    
T  41773 cgaggcg 41767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 8617 - 8510
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    |||||||||| |||||||  ||  ||| || ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||||||||||    
T  8617 tcaactcaaaggtcaaaaataccgaattttacatgctctctggtcatgctcggtatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactc 8518  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  8517 gcgaggcg 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 591 - 697
Alignment:
Q  1 atcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||| |||||||||||||| || |||||| |    |||||||||||  ||||||||||||||   |||||| ||||||| ||||| | | |||||||||    
T  591 atcaattcaaaagtcaaaattacgaaatctggatagctctctggtcacactcgctaggcgagtgaatctgctcgctatggagagctacaaggtgcaactc 690  T
Q  101 gcgaggc 107  Q
    |||||||    
T  691 gcgaggc 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 7678 - 7608
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||  ||||||||||||||   ||||||  |||||||||||||||| ||||||||| |||||||||    
T  7678 tctggtcacactcgctaggcgagtgaatctgctccctatggcgagctgcgaggtgcaactcacgaggcggg 7608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 36917 - 37023
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    ||||||||||||||||||| || |||||  |  | ||| |||||  ||||||||||| |||| |   || | ||| ||||||||||||||||||||||||    
T  36917 tcaactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggtgagtacagttgttcgctgtggcgagctgcgacgtgcaactcg 37016  T
Q  102 cgaggcg 108  Q
    |||||||    
T  37017 cgaggcg 37023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 11028 - 11098
Alignment:
Q  40 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||||||||| |||||||    
T  11028 tctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcaaggcggg 11098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 7075 - 7180
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||    
T  7075 tcaacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcg 7174  T
Q  102 cgaggc 107  Q
    ||||||    
T  7175 cgaggc 7180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 14455 - 14560
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||    
T  14455 tcaacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcg 14554  T
Q  102 cgaggc 107  Q
    ||||||    
T  14555 cgaggc 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20442 - 20487
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtca 47  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||    
T  20442 tcaactcaaaagtcaaaactacaaaatcttgcatgctctctggtca 20487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 80863 - 80904
Alignment:
Q  67 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  80863 tctgcttgctatggcgagctgcaaggtgcaactcgcgaggcg 80904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 4181 - 4285
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  4181 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 4280  T
Q  104 aggcg 108  Q
    |||||    
T  4281 aggcg 4285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 8612 - 8716
Alignment:
Q  5 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 103  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  8612 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 8711  T
Q  104 aggcg 108  Q
    |||||    
T  8712 aggcg 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 15489 - 15389
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 101  Q
    |||||| |||||| ||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||||    
T  15489 tcaacttaaaagttaaaattacgaaatcatgatgcctctctggtcacactcgctaggcgagtgaatctgctcgctatggggagctgcaaggtgcaactcg 15390  T
Q  102 c 102  Q
    |    
T  15389 c 15389  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 179112 - 179217
Alignment:
Q  3 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 102  Q
    |||||||||||||||||| |  |||||  |  | ||| |||||  |||||||||||||||| |   || | ||| |||||||||||| ||||||||||||    
T  179112 caactcaaaagtcaaaattatgaaatcaaggttgctcactggttgagctcgctaggcgagtacaattgttcgctgtggcgagctgcgtcgtgcaactcgc 179211  T
Q  103 gaggcg 108  Q
    ||||||    
T  179212 gaggcg 179217  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 9542 - 9641
Alignment:
Q  6 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 104  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  9542 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 9641  T

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Target: scaffold0273 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 9049 - 8986
Alignment:
Q  50 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 113  Q
    |||||||||||| |   |||||| ||||||||||||||| | |||||||| |||||||||||||    
T  9049 ctcgctaggcgactgaatctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggggaa 8986  T

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Target: scaffold0174 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 18113 - 18006
Alignment:
Q  2 tcaactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 100  Q
    ||||||| ||||||||||| | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||| ||||||||||||||||||    
T  18113 tcaactctaaagtcaaaattatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcaagctgcgacgtgcaactc 18014  T
Q  101 gcgaggcg 108  Q
    ||||||||    
T  18013 gcgaggcg 18006  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 21389 - 21359
Alignment:
Q  78 tggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||||||||||||    
T  21389 tggcgagctgcgacgtgcaactcgcgaggcg 21359  T

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Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 29281 - 29251
Alignment:
Q  78 tggcgagctgcgacgtgcaactcgcgaggcg 108  Q
    |||||||||||||||||||||||||||||||    
T  29281 tggcgagctgcgacgtgcaactcgcgaggcg 29251  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 103178 - 103136
Alignment:
Q  68 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 110  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  103178 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 103136  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 653 - 576
Alignment:
Q  36 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 113  Q
    ||||||||||||  |||||||||||| |   |||| | ||||||||||| ||| | |||||||||| |||||||||||    
T  653 cctctctggtcacactcgctaggcgattgaatctggtcgctatggcgagttgcaaggtgcaactcgtgaggcggggaa 576  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 3264 - 3335
Alignment:
Q  35 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 106  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||    
T  3264 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgagg 3335  T

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