View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16615_low_2 (Length: 638)
Name: NF16615_low_2
Description: NF16615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16615_low_2 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 49 - 305
Target Start/End: Original strand, 55665464 - 55665716
Alignment:
| Q |
49 |
tcttgcaggttcagttttaatttaacaaaaataacaagtacctacctgctcaaatgagggtagtggattgcccatgcaaaagcaccccagggcccacacg |
148 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| |||||||||||| || |||| |||| ||||| ||||||||| ||||| |||| | |
|
|
| T |
55665464 |
tcttgcaggttcaattttaatttaacaaaaacaacaa----ctacctgctcaattgggggtggtggcttgcctttgcaaaagcttgacagggtccacgtg |
55665559 |
T |
 |
| Q |
149 |
gcatttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaat |
248 |
Q |
| |
|
||| ||||||||||||||| | ||||||||||||||| |||| |||||| |||||||| ||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
55665560 |
gcaactctcagcatagaaagctttgcttgctcattcaactgggttaacagcgggatcagcgcaccatgactgaaaacaagatcacggcacctaggggaat |
55665659 |
T |
 |
| Q |
249 |
caacagcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgttca |
305 |
Q |
| |
|
|| | |||||||||||||||||| |||||||| |||||| | |||||||| |||| |
|
|
| T |
55665660 |
caccggcaatgtttcccaatgcccacacagcctgcaattttaaggttttagttttca |
55665716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 55659261 - 55659508
Alignment:
| Q |
58 |
ttcagttttaatttaacaaaaataacaagtacctacctgctcaaatgagggtagtggattgcccatgcaaaagcaccccagggcccacacggcatttctc |
157 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||| |||| |||| || || |||||||| ||||||| || ||| ||||| |
|
|
| T |
55659261 |
ttcagttttaatttaacaaacacaacaa----ctacctgctcaaatgggggtggtggttttcctctgcaaaagtttgacagggccaacgtagcaattctc |
55659356 |
T |
 |
| Q |
158 |
agcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaatcaacagcaa |
257 |
Q |
| |
|
||||||||||| | ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||| | |||| |
|
|
| T |
55659357 |
agcatagaaagctttgcttgctcattcaactgggataacagcgggatcaacgcaccatgactgagaacaagatcacgacaactaggggaatcaccggcaa |
55659456 |
T |
 |
| Q |
258 |
tgtttcccaatgccatcacagcctacaatttcagagttttagtgttcagcaa |
309 |
Q |
| |
|
|||||||||| | | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
55659457 |
catttcccaatgtccacgcagcctacaatttcagagttttattgttcagcaa |
55659508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 49 - 306
Target Start/End: Original strand, 54862072 - 54862325
Alignment:
| Q |
49 |
tcttgcaggttcagttttaatttaacaaaaataacaagtacctacctgctcaaatgagggtagtggattgcccatgcaaaagcaccccagggcccacacg |
148 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||| ||||| |||||| || |||| |||| |||||| |||||||| || || ||| | | |
|
|
| T |
54862072 |
tcttgtaggttcagttttaatttaataaaaacaacaattacct----gctcaagtgggggttgtggcttgcccctgcaaaagtttgacaaggtccaaatg |
54862167 |
T |
 |
| Q |
149 |
gcatttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaat |
248 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||| |
|
|
| T |
54862168 |
gcatttctcaatatataaagctctgtttggtcattcaactgggataacagcgggatcagggcaccatgactgagaacaagatcacgacacctaggggaat |
54862267 |
T |
 |
| Q |
249 |
caacagcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgttcag |
306 |
Q |
| |
|
|| |||||||||||||||||||| | ||||||||| ||||| ||||||| |||||| |
|
|
| T |
54862268 |
caccagcaatgtttcccaatgcccacggagcctacaaattcagtgttttagagttcag |
54862325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 55635518 - 55635238
Alignment:
| Q |
15 |
aatctagtattaatacaaatacatataaaagtgttcttgcaggttcagtttt-aatttaacaaaaataacaagtacctacctgctcaaatgagggtagtg |
113 |
Q |
| |
|
||||||||||||||||| || ||||| || |||||||||||| |||||| ||||||||||||| ||||| ||||| |||||||| |||| ||| |
|
|
| T |
55635518 |
aatctagtattaataca----caaataaaggtcttcttgcaggtttagtttttaatttaacaaaaacaacaattacct----gctcaaataggggttgtg |
55635427 |
T |
 |
| Q |
114 |
gattgcccatgcaaaagcaccccagggcccacacggcatttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcacc |
213 |
Q |
| |
|
| || ||| |||||||| || || ||| |||| |||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
55635426 |
gctttcccctgcaaaagtttgacaaggtccatgtggcaattctcagcatagaaagccttgcttgctcattcaactgggataacagtggaatcagggcacc |
55635327 |
T |
 |
| Q |
214 |
atgactgagaacgagatcacggcaactaggggaatcaacagcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgt |
302 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||| ||| | |||| ||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
55635326 |
atgactgagaacaagatcacggcaccaaggggactcaccggcaacgtttcccaatgcccacgcagcctacaatttcagagttttagtgt |
55635238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 303
Target Start/End: Complemental strand, 54627264 - 54627019
Alignment:
| Q |
55 |
aggttcagttttaatttaac-aaaaataacaagtacctacctgctcaaatgagggtagtggattgcccatgcaaaagcaccccagggcccacacggcatt |
153 |
Q |
| |
|
||||||||||||| |||||| ||||| ||||| |||||||||||| || |||| |||| |||||| |||||||| ||| | ||| |||||||| |
|
|
| T |
54627264 |
aggttcagttttattttaactaaaaacaacaa----ctacctgctcaagtgcgggttgtggcttgcccctgcaaaagtttgacagcgtccaaacggcatt |
54627169 |
T |
 |
| Q |
154 |
tctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaatcaaca |
253 |
Q |
| |
|
||||||| || |||| || |||||||||||| |||||||| || ||||||||||||| ||||||||||| |||||||||| |||||||||||| || |
|
|
| T |
54627168 |
tctcagcctataaagcccttcttgctcattcagctgggataaaagtaggatcagggcaccgtgactgagaacaagatcacggcctctaggggaatcacca |
54627069 |
T |
 |
| Q |
254 |
gcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgtt |
303 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| ||||| |
|
|
| T |
54627068 |
gcaatgtttcccaatgcccacgcagcctacaatttcagagttttggtgtt |
54627019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 336 - 474
Target Start/End: Original strand, 55659533 - 55659671
Alignment:
| Q |
336 |
ttctactgctactacatattagtataataaatatacctgttcttgaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatga |
435 |
Q |
| |
|
|||||||| || | ||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
55659533 |
ttctactggtattgcattttagtataataaatatacctgctctcgaacatcatcgctaggtgaactaagtagcttgacaagtattggtacagccccgtga |
55659632 |
T |
 |
| Q |
436 |
tcaattagcaacttagtgttctcagaagttccagctgct |
474 |
Q |
| |
|
||||| | || |||||||||| ||||||||||| ||||| |
|
|
| T |
55659633 |
tcaatgaccaccttagtgttcacagaagttccacctgct |
55659671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 3671917 - 3672030
Alignment:
| Q |
154 |
tctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaatcaaca |
253 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3671917 |
tctcagcatagaaatatctgtaagctcattcaagtgggataacagcgggatcatggcaccatgactgagaacaagatcacggcaactaggggaatcacag |
3672016 |
T |
 |
| Q |
254 |
gcaatgtttcccaa |
267 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
3672017 |
gcaacgtttcccaa |
3672030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 154 - 309
Target Start/End: Original strand, 52985806 - 52985961
Alignment:
| Q |
154 |
tctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaatcaaca |
253 |
Q |
| |
|
||||||||||||||| || ||| ||||| || ||||||| || ||||||| |||||||||||||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
52985806 |
tctcagcatagaaagccttgtttgatcattgaactgggatagcaatgggatcaaggcaccatgactgaaaacaagatcacggcacataggggaatcaacg |
52985905 |
T |
 |
| Q |
254 |
gcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgttcagcaa |
309 |
Q |
| |
|
|||| |||||| |||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
52985906 |
gcaacgtttcctaatgcccgcacagcctacaatttcagagttatggtgttcagcaa |
52985961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 412 - 508
Target Start/End: Complemental strand, 51315802 - 51315709
Alignment:
| Q |
412 |
acaagtattggtacaaacccatgatcaattagcaacttagtgttctcagaagttccagctgctgctatctttgcgagtgcgaaagcagagtaatact |
508 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||| |
|
|
| T |
51315802 |
acaagtattggtacagctccatgatcaattagcaacttagtgttctcagaagttccagc---tgctatgtttgtaagtgcgaaagcagcgtaatact |
51315709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 336 - 474
Target Start/End: Original strand, 54862350 - 54862485
Alignment:
| Q |
336 |
ttctactgctactacatattagtataataaatatacctgttcttgaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatga |
435 |
Q |
| |
|
||||||||||| ||||| ||||||||| | |||||||| | ||||| ||||| | ||||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
54862350 |
ttctactgctattacattttagtataa---acatacctgtgcccgaacagcatcacttggtgaactaagtagcttgataaatattggtactgccccatga |
54862446 |
T |
 |
| Q |
436 |
tcaattagcaacttagtgttctcagaagttccagctgct |
474 |
Q |
| |
|
||||||| || |||||||||||| |||||||||| |||| |
|
|
| T |
54862447 |
tcaattaccaccttagtgttctccgaagttccagatgct |
54862485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 51315913 - 51315842
Alignment:
| Q |
230 |
tcacggcaactaggggaatcaacagcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgttcagcaac |
310 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
51315913 |
tcacggcaactaggggaatcagcggcaatgtttcccaat---------gcctacaatttcagagttttagtgttcagcaac |
51315842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 474
Target Start/End: Complemental strand, 54626946 - 54626866
Alignment:
| Q |
394 |
ggtgaactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtgttctcagaagttccagctgct |
474 |
Q |
| |
|
||||||||||| |||||||||| |||||||| |||||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
54626946 |
ggtgaactaagaagcttgacaaacattggtactgcgccatgatcaactaccaccttagtgttctcagaagttccagctgct |
54626866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 362 - 467
Target Start/End: Original strand, 55665776 - 55665881
Alignment:
| Q |
362 |
ataaatatacctgttcttgaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtgttctcaga |
461 |
Q |
| |
|
||||||||||||| | ||| ||||| | |||||||||||||||||| ||||||||||||||| ||||||||| | ||||| |||| | ||||| || |
|
|
| T |
55665776 |
ataaatatacctggtaccgaagatcataactaggtgaactaagtagctcgacaagtattggtactgccccatgatctactagcaccttaatattctctga |
55665875 |
T |
 |
| Q |
462 |
agttcc |
467 |
Q |
| |
|
|||||| |
|
|
| T |
55665876 |
agttcc |
55665881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 474
Target Start/End: Original strand, 3672074 - 3672150
Alignment:
| Q |
398 |
aactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtgttctcagaagttccagctgct |
474 |
Q |
| |
|
|||| ||||| ||||| |||| ||||||| |||||||||||||| | |||||||||||||||||||||| ||||| |
|
|
| T |
3672074 |
aactgagtaggttgactagtaatggtacagccccatgatcaattacaaccttagtgttctcagaagttccacctgct |
3672150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 578 - 621
Target Start/End: Complemental strand, 51315644 - 51315601
Alignment:
| Q |
578 |
aagtttcaaacaaacctggtcctcaggagaatcgtccttaacta |
621 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
51315644 |
aagtttcaaacaaacctggtcctgaggaaaatcgtccttaacta |
51315601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 467
Target Start/End: Complemental strand, 55635181 - 55635075
Alignment:
| Q |
360 |
taataaatatacctgttcttgaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtgttctca |
459 |
Q |
| |
|
||||||||||||||| || |||||||| || || ||||||||||| ||| |||||| ||||||| ||| |||||||||| || |||| |||||||| |
|
|
| T |
55635181 |
taataaatatacctgctcctgaacatcttcgttgggtgaactaag-agcctgacaaacattggtattgtcccgtgatcaattaccaccttaatgttctca |
55635083 |
T |
 |
| Q |
460 |
gaagttcc |
467 |
Q |
| |
|
|||||||| |
|
|
| T |
55635082 |
gaagttcc |
55635075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 51315940 - 51315911
Alignment:
| Q |
156 |
tcagcatagaaagatctgcttgctcattca |
185 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
51315940 |
tcagcatagaaagatctgcttgctcattca |
51315911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Original strand, 52986667 - 52986708
Alignment:
| Q |
430 |
ccatgatcaattagcaacttagtgttctcagaagttccagct |
471 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
52986667 |
ccatgatcaattaccaccttagtgttcttagaagttccagct |
52986708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 96; Significance: 9e-47; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 153 - 308
Target Start/End: Complemental strand, 9889672 - 9889517
Alignment:
| Q |
153 |
ttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaatcaac |
252 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
9889672 |
ttctcagcatagaaatatctgctagctcattcaagtgggataacagcgggatcatggcaccatgactgagaacaagataacggcaactaggggaatcaca |
9889573 |
T |
 |
| Q |
253 |
agcaatgtttcccaatgccatcacagcctacaatttcagagttttagtgttcagca |
308 |
Q |
| |
|
|||| ||||||||| ||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
9889572 |
ggcaacgtttcccaacgcccacgaagcctacaatttcagagttttagtgttcagca |
9889517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 474
Target Start/End: Complemental strand, 9889470 - 9889350
Alignment:
| Q |
354 |
ttagtataataaatatacctgttcttgaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtg |
453 |
Q |
| |
|
|||||||||||||||||||| | ||||| || || |||||||||| ||||| ||||| |||| ||||||| |||||||||||||| | ||||||| |
|
|
| T |
9889470 |
ttagtataataaatatacctcgtgacgaacagcaacactaggtgaactgagtaggttgactagtaatggtacagccccatgatcaattacaaccttagtg |
9889371 |
T |
 |
| Q |
454 |
ttctcagaagttccagctgct |
474 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
9889370 |
ttctcagaagttccacctgct |
9889350 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 301
Target Start/End: Complemental strand, 13401570 - 13401417
Alignment:
| Q |
148 |
ggcatttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaa |
247 |
Q |
| |
|
||||||||||||||| ||||| | ||| ||||||||||| |||| |||||| ||||||||||||||||| || ||||| ||||| ||||| ||||| ||| |
|
|
| T |
13401570 |
ggcatttctcagcattgaaagctttgcctgctcattcaactgggttaacagcgggatcagggcaccatggctaagaacaagatcgcggcacctaggtgaa |
13401471 |
T |
 |
| Q |
248 |
tcaacagcaatgtttcccaatgccatcacagcctacaatttcagagttttagtg |
301 |
Q |
| |
|
||| |||||| |||||||||||| |||||||||||||| |||||||| |||| |
|
|
| T |
13401470 |
tcaccagcaacatttcccaatgcccacacagcctacaattacagagtttcagtg |
13401417 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 467
Target Start/End: Complemental strand, 13401344 - 13401257
Alignment:
| Q |
380 |
gaacatcatcattaggtgaactaagtagcttgacaagtattggtacaaacccatgatcaattagcaacttagtgttctcagaagttcc |
467 |
Q |
| |
|
||||||||||| | || |||||||||||||| |||| ||| || || |||||||||||||| || |||||| |||||||||||||| |
|
|
| T |
13401344 |
gaacatcatcacttggagaactaagtagcttcacaaatatcggcactgccccatgatcaattaccaccttagtattctcagaagttcc |
13401257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 46155209 - 46155332
Alignment:
| Q |
148 |
ggcatttctcagcatagaaagatctgcttgctcattcaagtgggataacagagggatcagggcaccatgactgagaacgagatcacggcaactaggggaa |
247 |
Q |
| |
|
||||||||| ||||||||||| | || ||||||||||| || | |||||||| | || || ||||||| |||||| ||||||||||| ||||| ||| |
|
|
| T |
46155209 |
ggcatttctaagcatagaaagtttagcatgctcattcaattgcgccaacagaggaagcaaagctccatgaccgagaacaagatcacggcatctaggcgaa |
46155308 |
T |
 |
| Q |
248 |
tcaacagcaatgtttcccaatgcc |
271 |
Q |
| |
|
|| |||||| |||||||||||| |
|
|
| T |
46155309 |
tctccagcaacatttcccaatgcc |
46155332 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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