View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16618_low_28 (Length: 272)

Name: NF16618_low_28
Description: NF16618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16618_low_28
NF16618_low_28
[»] chr6 (17 HSPs)
chr6 (114-272)||(15098626-15098789)
chr6 (63-116)||(15098539-15098592)
chr6 (229-272)||(8778892-8778935)
chr6 (210-272)||(28883768-28883830)
chr6 (220-272)||(16743286-16743338)
chr6 (210-272)||(2242041-2242104)
chr6 (229-272)||(21506344-21506387)
chr6 (229-272)||(34490355-34490398)
chr6 (229-271)||(11785363-11785405)
chr6 (220-272)||(1376363-1376416)
chr6 (220-272)||(1384111-1384164)
chr6 (219-272)||(8098615-8098668)
chr6 (211-272)||(25811858-25811919)
chr6 (229-269)||(9188967-9189007)
chr6 (220-272)||(17835611-17835663)
chr6 (220-272)||(31077792-31077844)
chr6 (220-272)||(34047386-34047438)
[»] chr7 (16 HSPs)
chr7 (213-269)||(33212034-33212090)
chr7 (229-271)||(43159595-43159638)
chr7 (220-272)||(35427544-35427597)
chr7 (229-272)||(2790185-2790228)
chr7 (221-271)||(21103012-21103063)
chr7 (221-272)||(40077254-40077305)
chr7 (218-272)||(6353722-6353776)
chr7 (167-216)||(24519376-24519425)
chr7 (220-272)||(32777726-32777779)
chr7 (240-272)||(3344875-3344907)
chr7 (229-272)||(6269374-6269418)
chr7 (229-272)||(12007205-12007249)
chr7 (229-272)||(17002344-17002388)
chr7 (216-272)||(19426575-19426631)
chr7 (229-272)||(46829487-46829531)
chr7 (229-272)||(47448834-47448878)
[»] chr2 (12 HSPs)
chr2 (229-272)||(36587488-36587531)
chr2 (229-272)||(31635830-31635873)
chr2 (218-272)||(32688564-32688618)
chr2 (219-272)||(6639492-6639545)
chr2 (219-272)||(33857215-33857268)
chr2 (229-269)||(1052519-1052559)
chr2 (229-272)||(7502447-7502491)
chr2 (229-269)||(11980659-11980699)
chr2 (229-272)||(19916663-19916707)
chr2 (229-272)||(22526013-22526057)
chr2 (217-272)||(41868389-41868445)
chr2 (229-272)||(43057072-43057116)
[»] chr8 (25 HSPs)
chr8 (218-272)||(20473776-20473830)
chr8 (219-272)||(31806297-31806350)
chr8 (217-272)||(14548843-14548898)
chr8 (229-272)||(35818945-35818988)
chr8 (213-272)||(42733584-42733644)
chr8 (237-272)||(1332488-1332523)
chr8 (229-272)||(6105456-6105499)
chr8 (229-272)||(12659060-12659103)
chr8 (229-272)||(41703327-41703370)
chr8 (229-271)||(12959946-12959988)
chr8 (229-271)||(16808589-16808631)
chr8 (214-272)||(22767125-22767183)
chr8 (218-272)||(27325755-27325809)
chr8 (239-272)||(7814612-7814645)
chr8 (220-272)||(23754726-23754779)
chr8 (216-272)||(25830265-25830322)
chr8 (219-272)||(39153702-39153755)
chr8 (220-272)||(10553103-10553155)
chr8 (220-271)||(13106476-13106528)
chr8 (220-271)||(26026895-26026947)
chr8 (229-272)||(28772143-28772187)
chr8 (229-272)||(33100488-33100532)
chr8 (220-272)||(35937532-35937584)
chr8 (220-272)||(41406876-41406928)
chr8 (220-272)||(43873711-43873763)
[»] chr5 (19 HSPs)
chr5 (212-272)||(32873169-32873229)
chr5 (220-272)||(36416082-36416134)
chr5 (222-272)||(6046314-6046364)
chr5 (231-272)||(29807022-29807063)
chr5 (219-272)||(31708368-31708421)
chr5 (229-272)||(1981898-1981941)
chr5 (229-272)||(15291025-15291068)
chr5 (222-265)||(24463258-24463301)
chr5 (229-272)||(38500951-38500994)
chr5 (215-272)||(16690493-16690551)
chr5 (216-272)||(38293378-38293435)
chr5 (229-272)||(1293105-1293149)
chr5 (229-269)||(2050935-2050975)
chr5 (229-272)||(13089801-13089845)
chr5 (221-272)||(21012568-21012620)
chr5 (220-272)||(22920512-22920564)
chr5 (221-272)||(34379453-34379505)
chr5 (220-272)||(40223805-40223857)
chr5 (220-272)||(42643230-42643282)
[»] chr4 (25 HSPs)
chr4 (229-272)||(43759171-43759214)
chr4 (229-272)||(38519801-38519845)
chr4 (229-272)||(149307-149350)
chr4 (229-272)||(1562556-1562599)
chr4 (217-272)||(25725714-25725769)
chr4 (237-272)||(46363999-46364034)
chr4 (229-272)||(48743718-48743761)
chr4 (218-272)||(37997253-37997307)
chr4 (220-272)||(15985256-15985309)
chr4 (206-247)||(19672418-19672459)
chr4 (219-272)||(55996420-55996473)
chr4 (218-270)||(3968882-3968934)
chr4 (220-272)||(5622457-5622509)
chr4 (228-272)||(6239387-6239431)
chr4 (228-272)||(17805459-17805503)
chr4 (220-272)||(39881050-39881102)
chr4 (220-272)||(40335788-40335840)
chr4 (220-272)||(44250247-44250299)
chr4 (229-272)||(47288090-47288134)
chr4 (229-269)||(47998602-47998642)
chr4 (229-272)||(51255754-51255798)
chr4 (220-272)||(53357097-53357149)
chr4 (220-272)||(54251470-54251522)
chr4 (229-272)||(54909331-54909375)
chr4 (213-272)||(56474783-56474843)
[»] chr3 (17 HSPs)
chr3 (229-272)||(39604266-39604309)
chr3 (229-272)||(27168701-27168745)
chr3 (217-272)||(33389004-33389060)
chr3 (229-272)||(5114086-5114129)
chr3 (229-272)||(11335322-11335365)
chr3 (210-272)||(29573375-29573438)
chr3 (229-272)||(41369605-41369648)
chr3 (228-272)||(26772375-26772420)
chr3 (220-272)||(29525863-29525916)
chr3 (228-272)||(622480-622524)
chr3 (220-272)||(26014811-26014863)
chr3 (229-272)||(26550245-26550289)
chr3 (217-269)||(28300282-28300334)
chr3 (229-272)||(42888993-42889037)
chr3 (229-272)||(45186571-45186615)
chr3 (220-272)||(52100260-52100312)
chr3 (216-272)||(52939648-52939704)
[»] scaffold0201 (1 HSPs)
scaffold0201 (220-272)||(8471-8524)
[»] chr1 (21 HSPs)
chr1 (229-272)||(31826958-31827002)
chr1 (229-272)||(18541071-18541114)
chr1 (229-272)||(33100816-33100859)
chr1 (229-272)||(49596243-49596286)
chr1 (219-269)||(42615858-42615908)
chr1 (218-272)||(49621360-49621414)
chr1 (220-272)||(19947760-19947813)
chr1 (215-272)||(25989004-25989061)
chr1 (219-272)||(30505356-30505409)
chr1 (229-270)||(39669814-39669855)
chr1 (216-272)||(47642626-47642683)
chr1 (229-272)||(649776-649820)
chr1 (220-272)||(3606114-3606166)
chr1 (220-272)||(9445107-9445159)
chr1 (229-272)||(9566980-9567024)
chr1 (244-272)||(12489601-12489629)
chr1 (229-272)||(30535999-30536043)
chr1 (220-272)||(37685330-37685382)
chr1 (220-272)||(37700136-37700188)
chr1 (229-272)||(48983687-48983731)
chr1 (229-269)||(51848888-51848928)
[»] scaffold0087 (1 HSPs)
scaffold0087 (229-272)||(27083-27126)
[»] scaffold0184 (1 HSPs)
scaffold0184 (229-271)||(13577-13619)
[»] scaffold0078 (1 HSPs)
scaffold0078 (229-271)||(59225-59267)
[»] scaffold0687 (1 HSPs)
scaffold0687 (239-272)||(7078-7111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (219-272)||(155904-155957)
[»] scaffold0432 (1 HSPs)
scaffold0432 (210-269)||(6542-6602)
[»] scaffold0006 (1 HSPs)
scaffold0006 (221-265)||(278467-278511)
[»] scaffold0001 (1 HSPs)
scaffold0001 (237-269)||(404764-404796)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 114 - 272
Target Start/End: Original strand, 15098626 - 15098789
Alignment:
Q  114 ttatgaagttcgaataaaaaga-tgtcatgctaactaatgtctcttggacaccgattaagaaaagcaaaacaaataaattttaagttgaaaataacactt 212  Q
    |||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15098626 ttatgaagttcgaataaaaaaaatgtcatgctaactgatgtctctaggacaccgattaagaaaagcaaaacaaataagttttaatttgaaaataacactt 15098725  T
Q  213 tttaaattg---agaagttatatttgaacaacca-ttttttaacaattttttgacaactttctc 272  Q
    |||||||||   |||| | ||||||||||||  | |||||||||||||| ||||||||||||||    
T  15098726 tttaaattgatcagaaatgatatttgaacaattatttttttaacaatttcttgacaactttctc 15098789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 15098539 - 15098592
Alignment:
Q  63 atttttaatctcataatttgatggggtgaaagtttaaaaagtaaagaatcttta 116  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  15098539 atttttgatctcataatttgatgggatgaaagtttaaaaagtaaagaatcttta 15098592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 8778935 - 8778892
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  8778935 atatttgtacaaccattttttaacaactttttgacaactttctc 8778892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 28883830 - 28883768
Alignment:
Q  210 ctttttaaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| ||||||||| | ||||||| ||||||||||||||| ||  ||||||||||||||||    
T  28883830 ctttttgaattgagaaatgatatttgtacaaccattttttaataaccttttgacaactttctc 28883768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 16743338 - 16743286
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  16743338 tgagaaatgatatttgtacaaccattttttaataatttttagacaactttctc 16743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 2242104 - 2242041
Alignment:
Q  210 ctttttaaattgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||||||  ||||| | |||||||||||| |||||||| ||||||||| |||||||||||||    
T  2242104 ctttttaaaaagagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctc 2242041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 21506344 - 21506387
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||    
T  21506344 atatttgtacaaccattttttgacaactttttgacaactttctc 21506387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 34490355 - 34490398
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||    
T  34490355 atatttgtacaaccattttttaacaatttttagacaattttctc 34490398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 11785363 - 11785405
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttct 271  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  11785363 atatttgtacaaccattttgtgacaattttttgacaactttct 11785405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 1376363 - 1376416
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||| ||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  1376363 tgagaaattatatttgtacaaccattttctaacaacttttgtgacaactttctc 1376416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 1384111 - 1384164
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||| ||||||||| ||||||||||| |||||| |||| |||||||||||||    
T  1384111 tgagaaattatatttgtacaaccattttctaacaacttttgtgacaactttctc 1384164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 8098668 - 8098615
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  8098668 ttgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 8098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 25811919 - 25811858
Alignment:
Q  211 tttttaaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||| ||| |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  25811919 ttttaaaaatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 25811858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 9189007 - 9188967
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  9189007 atatttgtacaaccattttttaacaacttttagacaacttt 9188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 17835611 - 17835663
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| |||||| |||| |||||| |||||||||||||||||    
T  17835611 tgagaaatgatatttgtacaacccttttctaacaactttttgacaactttctc 17835663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 31077792 - 31077844
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | |||||||||||| |||||||||  |||||| |||||||||||||    
T  31077792 tgagaaatgatatttgaacaatcattttttataaattttgtgacaactttctc 31077844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 34047386 - 34047438
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  34047386 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 34047438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 33212034 - 33212090
Alignment:
Q  213 tttaaattgagaagttatatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||    
T  33212034 tttaaattgagaaatgatatttgtacaaccattttctaacaattttttgacaacttt 33212090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 43159638 - 43159595
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttct 271  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  43159638 atatttgaacaaccattttttaacaatttttgtgacaactttct 43159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 35427544 - 35427597
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  35427544 tgagaaatcatatttaaacaaccattttttaacaatttttgtgacaactttctc 35427597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 2790185 - 2790228
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  2790185 atatttgtacaaccactttgtaacaattttttgacaactttctc 2790228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 21103012 - 21103063
Alignment:
Q  221 gagaagttatatttgaacaaccattttttaacaattttt-tgacaactttct 271  Q
    ||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  21103012 gagaaattatatttgaacaactatttttaaacaatttttgtgacaactttct 21103063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 40077254 - 40077305
Alignment:
Q  221 gagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||| ||||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  40077254 gagaaattatatttgtacaactattttgtaacaatttttagacaactttctc 40077305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 6353722 - 6353776
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||| ||||||||||||| |||||||| ||| |||||||||    
T  6353722 attgagaaatgatatttgtacaaccattttttgacaattttgtgataactttctc 6353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 24519425 - 24519376
Alignment:
Q  167 attaagaaaagcaaaacaaataaattttaagttgaaaataacacttttta 216  Q
    |||||||||| ||||| ||  |||||||||||| ||||||||||||||||    
T  24519425 attaagaaaaccaaaaaaagaaaattttaagttaaaaataacacttttta 24519376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 32777779 - 32777726
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||| |||| |||| |||||||||||||    
T  32777779 tgagaaatgatatttgaacaaccattttttgacaacttttatgacaactttctc 32777726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 3344875 - 3344907
Alignment:
Q  240 accattttttaacaattttttgacaactttctc 272  Q
    |||||||||||||||||||||||| ||||||||    
T  3344875 accattttttaacaattttttgacgactttctc 3344907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 6269374 - 6269418
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  6269374 atatttgtacaaccattttataacaatttttgtgacaactttctc 6269418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 12007249 - 12007205
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  12007249 atatttgaacaaccattttttgacaacttttgtgacaactttctc 12007205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 17002344 - 17002388
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||    
T  17002344 atatttgaacaaccattttttaacaacttttatgataactttctc 17002388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 19426575 - 19426631
Alignment:
Q  216 aaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||| ||||| | ||||||| ||||||||||| | |||| |||||||||||||||||    
T  19426575 aaatagagaaatgatatttgtacaaccattttgtgacaactttttgacaactttctc 19426631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 46829487 - 46829531
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  46829487 atatttgtacaaccattttgtaacaatttttgtgacaactttctc 46829531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 47448834 - 47448878
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  47448834 atatttgaacaaccattttttgacaacttttgtgacaactttctc 47448878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 36587531 - 36587488
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  36587531 atatttgaacaaccattttttgacaattttttgacaactttctc 36587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 31635873 - 31635830
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||    
T  31635873 atatttgtacaaccattttctaacaactttttgacaactttctc 31635830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 32688618 - 32688564
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||| ||||||| ||| | ||||||||||||||||||||||    
T  32688618 attgagaaatgatatttgtacaaccactttctgacaattttttgacaactttctc 32688564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 6639545 - 6639492
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| ||||||||||| |||||| ||||| |||||||||||    
T  6639545 ttgagaaataatatttgtacaaccattttctaacaactttttaacaactttctc 6639492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 33857215 - 33857268
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| |||| | |||| ||||||||||||||||||||||||    
T  33857215 ttgagaaatgatatttgtacaatctttttctaacaattttttgacaactttctc 33857268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 1052559 - 1052519
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  1052559 atatttgtacaaccattttttaacaacttttagacaacttt 1052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 7502491 - 7502447
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||    
T  7502491 atatttgtacaaccattttttgacaatttttgtgacaactttctc 7502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 11980659 - 11980699
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| ||||||||||| |||||| ||||||||||||||    
T  11980659 atatttgtacaaccattttctaacaactttttgacaacttt 11980699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 19916663 - 19916707
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||    
T  19916663 atatttgaacaaccactttttaataatttttgtgacaactttctc 19916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 22526057 - 22526013
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||    
T  22526057 atatttgaacatccattttttgacaatttttgtgacaactttctc 22526013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 41868445 - 41868389
Alignment:
Q  217 aattgagaagttatatttgaacaaccatttttt-aacaattttttgacaactttctc 272  Q
    ||||||||| | ||||||| |||| |||||||| ||||| |||||||||||||||||    
T  41868445 aattgagaaatgatatttgtacaatcatttttttaacaactttttgacaactttctc 41868389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 43057072 - 43057116
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||    
T  43057072 atatttgaacaaccactttttaacaacttttgtgacaactttctc 43057116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 20473776 - 20473830
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  20473776 attgagaaatgatatttgtacaaccattttataacaattttttgacaactttctc 20473830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 31806297 - 31806350
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  31806297 ttgagaaatgatatttgtacaaccattttctaacaattttttgacaactttctc 31806350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 14548898 - 14548843
Alignment:
Q  217 aattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  14548898 aattgagaaatgatatttgtacaaccattttttaataatttttagacaactttctc 14548843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 35818945 - 35818988
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  35818945 atatttgcacaaccattttctaacaattttttgacaactttctc 35818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 42733644 - 42733584
Alignment:
Q  213 tttaaattgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||| |||||| | |||||||||||||||||||| |||||||||| |||||| ||||||    
T  42733644 tttaaaatgagaaatgatatttgaacaaccatttttaaacaatttttgtgacaattttctc 42733584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 1332523 - 1332488
Alignment:
Q  237 acaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1332523 acaaccattttataacaattttttgacaactttctc 1332488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 6105499 - 6105456
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||    
T  6105499 atatttgtacaaccatttttttacaactttttgacaactttctc 6105456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 12659060 - 12659103
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  12659060 atatttgtacaaccaatttttaacaactttttgacaactttctc 12659103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 41703327 - 41703370
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  41703327 atatttgtagaaccattttttaacaattttttaacaactttctc 41703370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 12959946 - 12959988
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttct 271  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||    
T  12959946 atatttgcacaaccaatttctaacaattttttgacaactttct 12959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 16808589 - 16808631
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttct 271  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||    
T  16808589 atatttggacaaccattttctaacaactttttgacaactttct 16808631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 22767125 - 22767183
Alignment:
Q  214 ttaaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||||||| | ||||||| ||||||||||| | |||| |||||||||| ||||||    
T  22767125 ttaaattgagaaatgatatttgtacaaccattttctcacaactttttgacaattttctc 22767183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 27325755 - 27325809
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  27325755 attgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 27325809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 7814645 - 7814612
Alignment:
Q  239 aaccattttttaacaattttttgacaactttctc 272  Q
    |||||||||||||||||||| |||||||||||||    
T  7814645 aaccattttttaacaattttgtgacaactttctc 7814612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 23754779 - 23754726
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||| || |||| |||||||||||||    
T  23754779 tgagaaatgatatttgaacaaccattttttaataacttttgtgacaactttctc 23754726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 25830322 - 25830265
Alignment:
Q  216 aaattgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||||||| | ||||||| ||||||||||| |||||| |||| |||||||||||||    
T  25830322 aaattgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctc 25830265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 39153755 - 39153702
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| || || ||||| ||||||||||||||||||||||||    
T  39153755 ttgagaaatgatatttgtaccacaattttctaacaattttttgacaactttctc 39153702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 10553155 - 10553103
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||| ||| | ||||||||||||||||||||||    
T  10553155 tgagaaatgatatttgtacaaccactttctgacaattttttgacaactttctc 10553103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 13106476 - 13106528
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttct 271  Q
    |||||| | ||||||||||||||||||||  |||| |||||||||||||||||    
T  13106476 tgagaaatgatatttgaacaaccatttttggacaacttttttgacaactttct 13106528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 26026895 - 26026947
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttct 271  Q
    |||||| | ||||||||||||||||||||| |||| |||| ||||||||||||    
T  26026895 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 26026947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 28772187 - 28772143
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||    
T  28772187 atatttgaacaaccattttttgacaatttttgtgataactttctc 28772143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 33100532 - 33100488
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||    
T  33100532 atatttgaacaaccattttataacaacttttgtgacaactttctc 33100488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 35937584 - 35937532
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||| |||||| |||| ||||||||||||    
T  35937584 tgagaaatgatatttgtacaaccattttgtaacaacttttggacaactttctc 35937532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 41406928 - 41406876
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| |||| |||||||| |||||||||| |||||||||||    
T  41406928 tgagaaatgatatttgtacaatcattttttgacaattttttaacaactttctc 41406876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 43873763 - 43873711
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||| | ||||||||||||||||| ||||    
T  43873763 tgagaaatgatatttgtacaaccattttgtgacaattttttgacaactctctc 43873711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 32873229 - 32873169
Alignment:
Q  212 ttttaaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||||||||| | ||||||| ||||||| ||| |||||| |||||||||||||||||    
T  32873229 ttttaaattgagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctc 32873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 36416134 - 36416082
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  36416134 tgagaaatgatatttgtacaaccattttctaacaattttttgacaactttctc 36416082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 6046314 - 6046364
Alignment:
Q  222 agaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||| ||||||||||||||||| ||| |||||| |||||||||||||||||    
T  6046314 agaaattatatttgaacaaccaatttctaacaactttttgacaactttctc 6046364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 29807063 - 29807022
Alignment:
Q  231 atttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  29807063 atttgtacaaccattttttaacaatcttttgacaactttctc 29807022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 31708368 - 31708421
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| ||||||||||| |||||| |||||||||||||||||    
T  31708368 ttgagaaatgatatttgtacaaccattttataacaactttttgacaactttctc 31708421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 1981898 - 1981941
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||||||||||||||| |||| |||| |||||||||||||    
T  1981898 atatttgaacaaccatttttaaacacttttgtgacaactttctc 1981941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 15291068 - 15291025
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||    
T  15291068 atatttgtacaaccattgtttaacaattttttgataactttctc 15291025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 24463301 - 24463258
Alignment:
Q  222 agaagttatatttgaacaaccattttttaacaattttttgacaa 265  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||    
T  24463301 agaaattatatttgtacaaccattttgtaacaattttttgacaa 24463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 38500951 - 38500994
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  38500951 atatttgtacaaccattttgtgacaattttttgacaactttctc 38500994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 16690493 - 16690551
Alignment:
Q  215 taaattgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||| | ||||||| |||||||||| ||||||| |||| |||||||||||||    
T  16690493 taaattgagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctc 16690551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 38293435 - 38293378
Alignment:
Q  216 aaattgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||||||| | ||||||  ||||||||||| ||||||||||| |||||||||||||    
T  38293435 aaattgagaaatgatatttttacaaccattttataacaatttttgtgacaactttctc 38293378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 1293149 - 1293105
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||    
T  1293149 atatttgtacaaccattttttaacaacttttgtgacaactttctc 1293105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 2050935 - 2050975
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| ||||||||||| ||||||||||| |||||||||    
T  2050935 atatttgtacaaccattttgtaacaatttttggacaacttt 2050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 13089845 - 13089801
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  13089845 atatttgaacaaccattttttgacaacttttgtgacaactttctc 13089801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 21012568 - 21012620
Alignment:
Q  221 gagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||| ||||||||| ||||||||||| | ||||||||| |||||||||||||    
T  21012568 gagaaattatatttgtacaaccattttatgacaatttttgtgacaactttctc 21012620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 22920564 - 22920512
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||| |||||| |||| ||||||||||||    
T  22920564 tgagaaataatatttgtacaaccattttgtaacaaattttggacaactttctc 22920512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 34379453 - 34379505
Alignment:
Q  221 gagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| |||||||||||||||||||| || ||||||| |||||| ||||||    
T  34379453 gagaagtgatatttgaacaaccatttttaaataatttttgtgacaattttctc 34379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 40223857 - 40223805
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| ||||||||| ||||||| ||| | |||| |||||||||||||||||    
T  40223857 tgagaaattatatttgtacaaccactttgtgacaactttttgacaactttctc 40223805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 42643282 - 42643230
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| ||||||||||| ||| ||||||| |||| ||| |||||||||||||    
T  42643282 tgagaaattatatttgaataactattttttgacaactttgtgacaactttctc 42643230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 43759214 - 43759171
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  43759214 atatttgtacaaccattttctaacaattttttgacaactttctc 43759171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 38519801 - 38519845
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  38519801 atatttgaacaaccattttttgacaatttttgtgacaactttctc 38519845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 149350 - 149307
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  149350 atatttgtacaaccaatttctaacaattttttgacaactttctc 149307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 1562599 - 1562556
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||    
T  1562599 atatttgtacaaccattttctaacaactttttgacaactttctc 1562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 25725769 - 25725714
Alignment:
Q  217 aattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||| | ||||||| ||||||| ||| |||||| |||||||||||||||||    
T  25725769 aattgagaaatgatatttgtacaaccactttctaacaactttttgacaactttctc 25725714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 46364034 - 46363999
Alignment:
Q  237 acaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46364034 acaaccattttctaacaattttttgacaactttctc 46363999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 48743718 - 48743761
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||    
T  48743718 atatttgtacaaccaatttttaacaattttttgacaattttctc 48743761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 37997253 - 37997307
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  37997253 attgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 37997307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 15985256 - 15985309
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||||||||||||||| | |||||||||||    
T  15985256 tgagaaataatatttgtacaaccattttttaacaatttttgttacaactttctc 15985309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 19672459 - 19672418
Alignment:
Q  206 aacactttttaaattgagaagttatatttgaacaaccatttt 247  Q
    |||| ||| ||||||||||| |||||||||||||||||||||    
T  19672459 aacattttctaaattgagaaattatatttgaacaaccatttt 19672418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 55996420 - 55996473
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| |||| |||||| ||||||||||||||||| ||||||    
T  55996420 ttgagaaatgatatttgtacaatcattttctaacaattttttgacaattttctc 55996473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 3968882 - 3968934
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttc 270  Q
    |||||||| | ||||||| ||||||||||| |||||| |||||||||| ||||    
T  3968882 attgagaaatgatatttgtacaaccattttctaacaactttttgacaattttc 3968934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 5622457 - 5622509
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  5622457 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 5622509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 6239387 - 6239431
Alignment:
Q  228 tatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| |||||||||||  || ||||||||||||||||||||    
T  6239387 tatatttgtacaaccattttgcaataattttttgacaactttctc 6239431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 17805459 - 17805503
Alignment:
Q  228 tatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  17805459 tatatttgtacaactattttttaataattttttgacaattttctc 17805503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 39881102 - 39881050
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| |||| |||||| |||||| |||||||||||||||||    
T  39881102 tgagaaatgatatttgtacaatcattttctaacaactttttgacaactttctc 39881050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 40335788 - 40335840
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| |||| |||||| | ||||||||||||||||||||||    
T  40335788 tgagaaatgatatttgtacaatcattttattacaattttttgacaactttctc 40335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 44250299 - 44250247
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| | | ||||||| ||||||||||||||||||||||||    
T  44250299 tgagaaatgatatttgtatatccattttgtaacaattttttgacaactttctc 44250247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 47288090 - 47288134
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  47288090 atatttgtacaaccattttgtaacaatttttgtgacaactttctc 47288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 47998602 - 47998642
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| ||||||||||| |||||| ||||||||||||||    
T  47998602 atatttgtacaaccattttgtaacaactttttgacaacttt 47998642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 51255754 - 51255798
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  51255754 atatttgaacaaccattttttgacaacttttgtgacaactttctc 51255798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 53357149 - 53357097
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| | ||| ||||| ||||||||||||||||||||||||    
T  53357149 tgagaaatgatatttgtataactattttctaacaattttttgacaactttctc 53357097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 54251522 - 54251470
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||| ||||||||| ||||||| ||||||||||||    
T  54251522 tgagaaatgatatttgtacaactattttttaataatttttcgacaactttctc 54251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 54909331 - 54909375
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  54909331 atatttgaacaaccattattaaacaatttttgtgacaactttctc 54909375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 56474843 - 56474783
Alignment:
Q  213 tttaaattgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||| | |||||||||||| |||||||| ||||||||| |||||| ||||||    
T  56474843 tttaaatagagaaatgatatttgaacaatcatttttttacaatttttgtgacaattttctc 56474783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 39604309 - 39604266
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  39604309 atatttgtacaaccatttttcaacaattttttgacaactttctc 39604266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 27168745 - 27168701
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  27168745 atatttgaacaaccattttttaataatttttgtgacaactttctc 27168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 33389004 - 33389060
Alignment:
Q  217 aattgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||| | ||||||||||||||| |||| |||||||||| |||||||||||||    
T  33389004 aattgagaaatgatatttgaacaaccacttttaaacaatttttgtgacaactttctc 33389060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 5114086 - 5114129
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  5114086 atatttgaacaaccattttttacaatttttttgacaactttctc 5114129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 11335365 - 11335322
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||    
T  11335365 atatttgtacaaccattttctaacaactttttgacaactttctc 11335322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 29573438 - 29573375
Alignment:
Q  210 ctttttaaattgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||| |||||||||| | ||||||| ||||||||||| |||||| |||| |||||||||||||    
T  29573438 cttttcaaattgagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctc 29573375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 41369605 - 41369648
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  41369605 atatttgtacaaccattttctaataattttttgacaactttctc 41369648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 26772375 - 26772420
Alignment:
Q  228 tatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  26772375 tatatttgaacaaccattttataataatttttgtgacaactttctc 26772420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 29525863 - 29525916
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaatt-ttttgacaactttctc 272  Q
    |||||| | |||||||||||||||| ||||||||||| || |||||||||||||    
T  29525863 tgagaaatgatatttgaacaaccatcttttaacaattcttatgacaactttctc 29525916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 622524 - 622480
Alignment:
Q  228 tatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| ||||||||||| | |||| |||||||||||||||||    
T  622524 tatatttgtacaaccattttattacaactttttgacaactttctc 622480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 26014811 - 26014863
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  26014811 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 26014863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 26550245 - 26550289
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  26550245 atatttgcacaaccattttttaataatttttgtgacaactttctc 26550289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 28300282 - 28300334
Alignment:
Q  217 aattgagaagttatatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||||| | ||||||| ||||||||||| | | |||||||||||||||||    
T  28300282 aattgagaaatgatatttgtacaaccattttattataattttttgacaacttt 28300334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 42888993 - 42889037
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||    
T  42888993 atattcgaacaaccattttttgacaatttttgtgacaactttctc 42889037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 45186615 - 45186571
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  45186615 atatttgtacaaccattttctaacaatttttgtgacaactttctc 45186571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 52100260 - 52100312
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||||||||||| |||||||  |||||||||||    
T  52100260 tgagaaatgatatttgtacaaccattttttaataatttttgtacaactttctc 52100312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 52939648 - 52939704
Alignment:
Q  216 aaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||| ||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  52939648 aaatagagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 52939704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 8471 - 8524
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    |||||| | |||||||||||| |||||||||||||||||| |||||||||||||    
T  8471 tgagaaatgatatttgaacaatcattttttaacaatttttatgacaactttctc 8524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 31826958 - 31827002
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  31826958 atatttgaacaaccatttttttacaatttttgtgacaactttctc 31827002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 18541114 - 18541071
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||    
T  18541114 atatttgtacaaccattttctaacaactttttgacaactttctc 18541071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 33100816 - 33100859
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  33100816 atatttgaacaaccattttttacaacttttttgacaactttctc 33100859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 49596243 - 49596286
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  49596243 atatttgtacaaccattttattacaattttttgacaactttctc 49596286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 42615858 - 42615908
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| | ||||||| |||| |||||||||| |||||||||||||||||    
T  42615858 ttgagaaatgatatttgtacaatcattttttaataattttttgacaacttt 42615908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 49621360 - 49621414
Alignment:
Q  218 attgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||||| | ||||||| ||||||||||| ||| ||||||| ||||||||||||    
T  49621360 attgagaaatgatatttgtacaaccattttgtaataatttttagacaactttctc 49621414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 19947813 - 19947760
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||| |||| |||| |||||||||||||    
T  19947813 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctc 19947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 25989061 - 25989004
Alignment:
Q  215 taaattgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||| ||||| | ||||||| |||||||||||||||||| |||| ||||| ||||||    
T  25989061 taaatagagaaatgatatttgtacaaccattttttaacaacttttagacaattttctc 25989004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 30505409 - 30505356
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| ||||||| ||| ||||||||||||||||| ||||||    
T  30505409 ttgagaaatgatatttgtacaaccaatttctaacaattttttgacaaatttctc 30505356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 39669814 - 39669855
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttc 270  Q
    ||||||| ||||||||||| | ||||||||||||||||||||    
T  39669814 atatttgtacaaccattttgtgacaattttttgacaactttc 39669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 47642683 - 47642626
Alignment:
Q  216 aaattgagaagttatatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    |||||||||| | ||||||||||||||||||||| | || |||| |||||||||||||    
T  47642683 aaattgagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctc 47642626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 649776 - 649820
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  649776 atatttgaacaaccatttttttacaacttttgtgacaactttctc 649820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 3606166 - 3606114
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||| ||||||| ||| |||||| |||||||||||||||||    
T  3606166 tgagaaatgatatttgtacaaccaatttctaacaactttttgacaactttctc 3606114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 9445107 - 9445159
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||| | ||||||||||| |||||| |||||||||||||||||    
T  9445107 tgagaaatgatattcgtacaaccattttgtaacaactttttgacaactttctc 9445159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 9567024 - 9566980
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  9567024 atatttgaacaaccattttttgacaacttttgtgacaactttctc 9566980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 12489629 - 12489601
Alignment:
Q  244 ttttttaacaattttttgacaactttctc 272  Q
    |||||||||||||||||||||||||||||    
T  12489629 ttttttaacaattttttgacaactttctc 12489601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 30535999 - 30536043
Alignment:
Q  229 atatttgaacaaccattttttaacaattttt-tgacaactttctc 272  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||    
T  30535999 atatttgtacaatcattttttaacaatttttgtgacaactttctc 30536043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 37685330 - 37685382
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  37685330 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 37685382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 37700188 - 37700136
Alignment:
Q  220 tgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    |||||| | ||||||||||||||||||||||  | |||| |||||||||||||    
T  37700188 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctc 37700136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 48983731 - 48983687
Alignment:
Q  229 atatttgaacaaccattttttaacaa-ttttttgacaactttctc 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||    
T  48983731 atatttgaacaaccattttttgacaacttttgtgacaactttctc 48983687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 51848888 - 51848928
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaacttt 269  Q
    ||||||| ||||||||||| |||||| ||||||||||||||    
T  51848888 atatttgtacaaccattttctaacaactttttgacaacttt 51848928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 27126 - 27083
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||    
T  27126 atatttgtacaaccatttcttaacaatcttttgacaactttctc 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 13619 - 13577
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttct 271  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||    
T  13619 atatttgaacaatcattttttaacaattttatgagaactttct 13577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 59225 - 59267
Alignment:
Q  229 atatttgaacaaccattttttaacaattttttgacaactttct 271  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||    
T  59225 atatttgaacaatcattttttaacaattttatgagaactttct 59267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 7078 - 7111
Alignment:
Q  239 aaccattttttaacaattttttgacaactttctc 272  Q
    |||||||||||||||||||| |||||||||||||    
T  7078 aaccattttttaacaattttgtgacaactttctc 7111  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 155904 - 155957
Alignment:
Q  219 ttgagaagttatatttgaacaaccattttttaacaattttttgacaactttctc 272  Q
    ||||||| | ||||||| ||||||||||| | |||| |||||||||||||||||    
T  155904 ttgagaaatgatatttgtacaaccattttattacaactttttgacaactttctc 155957  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 6602 - 6542
Alignment:
Q  210 ctttttaaattgagaagttatatttgaacaaccattttttaacaa-ttttttgacaacttt 269  Q
    |||||||| | ||||| | |||||||||||| ||||||||||||| |||| ||||||||||    
T  6602 ctttttaagtagagaaatgatatttgaacaatcattttttaacaacttttgtgacaacttt 6542  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 278511 - 278467
Alignment:
Q  221 gagaagttatatttgaacaaccattttttaacaattttttgacaa 265  Q
    ||||| ||||||||| ||||||||| | |||||||||||||||||    
T  278511 gagaaattatatttgtacaaccattctgtaacaattttttgacaa 278467  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 404764 - 404796
Alignment:
Q  237 acaaccattttttaacaattttttgacaacttt 269  Q
    |||| ||||||||||||||||||||||||||||    
T  404764 acaatcattttttaacaattttttgacaacttt 404796  T

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