View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16622_high_22 (Length: 230)
Name: NF16622_high_22
Description: NF16622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16622_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 36269670 - 36269471
Alignment:
| Q |
17 |
gaatttgataacaacatgaatatattttacttgctaaaagtatctttaccccaagcctcgtcctctctatattcttttatcatcatttatcactaatata |
116 |
Q |
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| T |
36269670 |
gaatttgataacaacatgaatatattttacttgctaaaagtatctttaccccaagcctcgtcctctctatattcttttatcatcatttatcactaatata |
36269571 |
T |
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| Q |
117 |
agcaatgccatatagccatcgttgagtcgtagggtaca-ttgaagctgtgtcggtatcttgagtatgacggtataatggtcctaaaagatacaacatgct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36269570 |
agcaatgccatatagccatcgttgagtcgtagggtatatttgaagctatgtcggtatcttgagtatgacggtataatggtcctaaaagatacaacatgct |
36269471 |
T |
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