View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16622_low_1 (Length: 1083)
Name: NF16622_low_1
Description: NF16622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16622_low_1 |
 | |
|
| [»] scaffold0394 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 742; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 742; E-Value: 0
Query Start/End: Original strand, 17 - 1074
Target Start/End: Original strand, 31575584 - 31576641
Alignment:
| Q |
17 |
agctgtatgccagaaccattatttgacaggttacaattatttcattttggcaattattgaactaacaatttaatttaaagatagaacaattaatttgaca |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
31575584 |
agctgtatgccagaaccattatttgacaggttacaattatttaattttggaaattattgaactaacaatttaattcaaagatagaacaattaatttgata |
31575683 |
T |
|
| Q |
117 |
cagtgatagaatgtgtctcatacgaatcagatgaaggtatatgcggaacttgtagtggtgacctttctggagaaaataagatgggatttggaggatatga |
216 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||||||| ||||||||| | |||||| |||| |||||| ||||||||||||| || |||||||||||||| |
|
|
| T |
31575684 |
gagtaatagaatttgtctcatacgaatcggatgaagatatatgcggcatttgtagcggtgtcctttcaggagaaaataagacaggctttggaggatatga |
31575783 |
T |
|
| Q |
217 |
caccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatc |
316 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
31575784 |
caccgaggaaagtggtccttgcaacatttctattactttattcatcggtggcctgtctaatggtttggtttgaatacaccatagactcaccaaagtaatc |
31575883 |
T |
|
| Q |
317 |
tttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctcaagatccttataaatccaatctggaaaataca |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31575884 |
tttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctcaagatccttataaatccaatctggaaaataca |
31575983 |
T |
|
| Q |
417 |
tttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaac |
516 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31575984 |
tttccggagtacacgaccctccagtgtcatagttcttccttcctccgatcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaac |
31576083 |
T |
|
| Q |
517 |
accaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaattttt |
616 |
Q |
| |
|
|||||||||| |||| ||||| ||||||| |||||||||||||| |||||||||| || | |||||| ||||||||||||||| |||| || ||||| |
|
|
| T |
31576084 |
tccaccaaatgatctattaaatgcttctggtgccatatatcctattgttcctcttgcccctaatattgacacaatactatccttcttttggcatattttc |
31576183 |
T |
|
| Q |
617 |
gctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgat |
716 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |
|
|
| T |
31576184 |
gctagtccaaaatcagagatttttgggcaaaaatcatcatccaaaagaatgttttgaggttttatatcaagatgcagaatccttgaactgcatccttggt |
31576283 |
T |
|
| Q |
717 |
gcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaa |
816 |
Q |
| |
|
||||||||||||| |||||||||||||||| || |||||||| ||||||||||||| ||||||||||| ||| | ||||||| |||||||||||||||| |
|
|
| T |
31576284 |
gcaagtactctagacctctagcaatgccaattgctatttggaacaaagtgttccaatcaaaatcacaaatagcgttaggaaattcacttttatagatgaa |
31576383 |
T |
|
| Q |
817 |
cttatccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgtt |
916 |
Q |
| |
|
||||||||||||||| | ||||||||| |||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||| ||||||||||| |
|
|
| T |
31576384 |
cttatccaatgatccattgggcatgaattcatatattagtgctcttttgtccacctcataacaaaagcctaaaagggacacaatgttcatgtgtgatgtt |
31576483 |
T |
|
| Q |
917 |
ctactaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttcactgccacttgacgaccatcggataaaattgctt |
1016 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||| |
|
|
| T |
31576484 |
cgactaatgctagcaacttcatttatgaattcttctccatttcctttggattcatttattactttcaccgccacttgacgaccatcaattaaacttgctt |
31576583 |
T |
|
| Q |
1017 |
tgtatacaacaccatatcctccttggcctaatttatcccgaaatgagtctgtgctcct |
1074 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
31576584 |
tgtaaacaacaccatatcctccttggcctaatttatcccgaaatgagtttgtgatcct |
31576641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 84 - 1074
Target Start/End: Original strand, 31607911 - 31608901
Alignment:
| Q |
84 |
atttaatttaaagatagaacaattaatttgacacagtgatagaatgtgtctcatacgaatcagatgaaggtatatgcggaacttgtagtggtgacctttc |
183 |
Q |
| |
|
|||| ||||| |||||||||| ||| |||||||| || | |||| ||||||||| |||||||||||| |||| | | ||||||||||| |||||| |
|
|
| T |
31607911 |
atttgatttatagatagaacagttattttgacactgtaactgaatttgtctcatataaatcagatgaagacatatatgacaattgtagtggtggcctttc |
31608010 |
T |
|
| Q |
184 |
tggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggttta |
283 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
31608011 |
cggagaaaataagaccggctttggaggatatgacactgatgacagcggtccttgcaacatttctattactttattcattggtggtctatctgatggattc |
31608110 |
T |
|
| Q |
284 |
gtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgct |
383 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | || |||| ||| |||||||||| |
|
|
| T |
31608111 |
gtttgaatgcaccatagactcaccatagtaatctttctaaccatatcattttcttccgttgagattgtcaacccatttaaaacagtatggttaccttgct |
31608210 |
T |
|
| Q |
384 |
caagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacat |
483 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
31608211 |
caagatccttataaatccagtctggaaagtacatttcagaagtacatgacccgccagtgtcgtagttcttccttcctccaatcatttcaagaatcaacat |
31608310 |
T |
|
| Q |
484 |
gccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtatt |
583 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || | |||| |
|
|
| T |
31608311 |
gccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggcgccatatatcctatagttcctcgtgtccccaatatt |
31608410 |
T |
|
| Q |
584 |
gaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatat |
683 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31608411 |
gacacaatactgtccttcctttgacatattttagcaagtccaaaatcagatatttttggacaaaagtcttcatccaaaagaatgttttgaggtttgatat |
31608510 |
T |
|
| Q |
684 |
caagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcaca |
783 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||||| || |||||||||||||| | | || |||||| ||||||||||||| ||||||||| |
|
|
| T |
31608511 |
caagatgtagtatccttgaactacatccttgatgcaagtactcgagacctctagcaatgccgatagcaacttggaacaaagtgttccaatcaaaatcaca |
31608610 |
T |
|
| Q |
784 |
aacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatag |
883 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||||||||| ||||||| ||||||| | ||||||||||| |||||||| ||| ||||||||||| | |
|
|
| T |
31608611 |
aacagcgtcaggaaatccactcttatagatgaacttatccagggatcctttgggcatgtattcatatattagcgctcttttattcacctcataacaaaaa |
31608710 |
T |
|
| Q |
884 |
cctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttca |
983 |
Q |
| |
|
|||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31608711 |
cctaagagtgacacaatgttcaggtgtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttgactcgtttattactttca |
31608810 |
T |
|
| Q |
984 |
ctgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatgagtctgtgctcct |
1074 |
Q |
| |
|
||||||||||||||||||| | |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||| |||| |
|
|
| T |
31608811 |
ctgccacttgacgaccatccgttaaacttgctttgtacacaacaccatatcctccatggcctaatttatctcgaaatgagtttgtgatcct |
31608901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 166 - 1074
Target Start/End: Original strand, 31594793 - 31595698
Alignment:
| Q |
166 |
ttgtagtggtgacctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggt |
265 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| || ||||||||| ||| ||||||||||| |||||||| | |||||| |||||||||||||| ||| |
|
|
| T |
31594793 |
ttgtagtggtggccttttaggagaaaataagacaggttttggaggaaatgtgaccgatgaaagcggtccttgtagcatttcaattactttattcattggt |
31594892 |
T |
|
| Q |
266 |
ggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaa |
365 |
Q |
| |
|
||||||||| |||| || ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||| | | || |||| |
|
|
| T |
31594893 |
ggtctatctaatggatttgtttgaatgcaccataggctcaccatagtaatctttttaaccatatcattttcttcctctgaaattgtcaaagaatttaaaa |
31594992 |
T |
|
| Q |
366 |
ggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgat |
465 |
Q |
| |
|
| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| || |
|
|
| T |
31594993 |
g---atcattaccttgctcaagatccttataaatccagtctggaaagtacatttcagaagtacacgaccctccagtttgatagttctttcttcctccaat |
31595089 |
T |
|
| Q |
466 |
catttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagtt |
565 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
31595090 |
catttcaagaatcaacataccataactgtatacatcagatttgtaagaaacaccaccaaatgctctgctaaatacttctggcgccatatatcctatagtt |
31595189 |
T |
|
| Q |
566 |
cctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaa |
665 |
Q |
| |
|
|||||||| || ||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |
|
|
| T |
31595190 |
cctcttgtccccggtattgacacaatactatcattcatttgacatatttttgctagtccaaaatcagagatttttgggcaaaagttttcgtccaaaagaa |
31595289 |
T |
|
| Q |
666 |
tgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagt |
765 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||| ||||| |
|
|
| T |
31595290 |
tgttttgaggtttgatatcaagatgcagtatccttgaactacatccttgatgcaagtactctaaacctctagcaatgccgatagcaatttggaacaaagt |
31595389 |
T |
|
| Q |
766 |
gttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttg |
865 |
Q |
| |
|
|||| ||| ||||||||||||||| | |||||||||||||||||||||||| || || | |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
31595390 |
gttcgaatcaaaatcacaaacagcgtcaggaaatccacttttatagatgaatttgtctagtgatcctttgggcatgaactcatatattagtgctctttta |
31595489 |
T |
|
| Q |
866 |
ttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttg |
965 |
Q |
| |
|
|| |||| |||||||| |||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
31595490 |
tttgcctcgtaacaataacctaaaagtgacacaatgttcatgtgtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttg |
31595589 |
T |
|
| Q |
966 |
attcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatgagtc |
1065 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||| |||||||||||||| || ||||||| |
|
|
| T |
31595590 |
actcgtttattactttcactgccacttgacgaccatccgttaaacttgctttgtacacaacaccatatcctccgtggcctaatttatcacggaatgagtt |
31595689 |
T |
|
| Q |
1066 |
tgtgctcct |
1074 |
Q |
| |
|
|||| |||| |
|
|
| T |
31595690 |
tgtgatcct |
31595698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 550; E-Value: 0
Query Start/End: Original strand, 164 - 1051
Target Start/End: Original strand, 31604400 - 31605284
Alignment:
| Q |
164 |
acttgtagtggtgacctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcg |
263 |
Q |
| |
|
||||||| | ||| |||||| || ||| |||||| ||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31604400 |
acttgtaattgtggcctttcaggtgaatataagacgggctttggaggatatgatattgttgaaagtggtccttgcaacatttctattactttattcatcg |
31604499 |
T |
|
| Q |
264 |
gtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaa |
363 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| || |||| ||| || || |
|
|
| T |
31604500 |
gtggtctatctgatagtttagtttgaatgcgccacagactcaccaaagtaatctttctgaccatatcattttcttcctccgagactgtcgaacaatttaa |
31604599 |
T |
|
| Q |
364 |
aaggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccg |
463 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| |||||||| |
|
|
| T |
31604600 |
aag---agtattaccttgctcaagatccttataaatccaatctggaaagtacatttcagaagtacatgacccgccagtgtcgtagttcttccttcctccg |
31604696 |
T |
|
| Q |
464 |
atcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatag |
563 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| |||||||||||||| | |
|
|
| T |
31604697 |
atcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaactccaccaaatgatctattaaatgcttctggtgccatatatcctattg |
31604796 |
T |
|
| Q |
564 |
ttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaag |
663 |
Q |
| |
|
||||||||| || | |||||| ||||||||||||||| |||| || ||||| ||||||||||||||||| |||||||| ||||| || || |||||||| |
|
|
| T |
31604797 |
ttcctcttgcccctaatattgacacaatactatccttcttttggcatattttcgctagtccaaaatcagagatttttgggcaaaaatcatcatccaaaag |
31604896 |
T |
|
| Q |
664 |
aatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaa |
763 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| || |||||||| ||| |
|
|
| T |
31604897 |
aatgttttgaggttttatatcaagatgcagaatccttgaactgcatccttggtgcaagtactctagacctctagcaatgccaattgctatttggaacaaa |
31604996 |
T |
|
| Q |
764 |
gtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttt |
863 |
Q |
| |
|
|||||||||| ||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
31604997 |
gtgttccaatcaaaatcacaaatagcgttaggaaattcacttttatagatgaacttatccaatgatccattgggcatgaattcatatattagtgctcttt |
31605096 |
T |
|
| Q |
864 |
tgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttt |
963 |
Q |
| |
|
||| | ||||||||||| |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31605097 |
tgtccacctcataacaaaagcctaaaagggacacaatgttcatgtgtgatgttcgactaatgctagcaacttcatttatgaattcttctccatttccttt |
31605196 |
T |
|
| Q |
964 |
tgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaattta |
1051 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
31605197 |
ggattcatttattactttcaccgccacttgacgaccatcaattaaacttgctttgtaaacaacaccatatcctccttggcctaattta |
31605284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 164 - 1053
Target Start/End: Original strand, 31614275 - 31615154
Alignment:
| Q |
164 |
acttgtagtggtgacctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcg |
263 |
Q |
| |
|
||||||||||||| ||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31614275 |
acttgtagtggtggcctttatggtgaatgtaagaagggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcg |
31614374 |
T |
|
| Q |
264 |
gtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaa |
363 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||| || || |
|
|
| T |
31614375 |
gtggtctgtctaatggtttagtttgaatgcaccaaacactcaccaaagtgatctttctaatcatatcattttcttcctctgagattgtcaaacaatttaa |
31614474 |
T |
|
| Q |
364 |
aaggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccg |
463 |
Q |
| |
|
||| | ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||| |
|
|
| T |
31614475 |
aagagtgttatt---ttgctcaagattcttataaatccaatctggaaagtacatttcagaagtgcatgaccctccagtgtcatagttctttcttcctcca |
31614571 |
T |
|
| Q |
464 |
atcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatag |
563 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
31614572 |
atcatttcaagaatcaacattccataactatatacatcagatttgtaagaaactccgccaaatgctctgctaaatacttctggtgccatatatcctatag |
31614671 |
T |
|
| Q |
564 |
ttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaag |
663 |
Q |
| |
|
||||||||||||| | |||||| ||||||||||||||| |||| || ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
31614672 |
ttcctcttgtacctaatattgacacaatactatccttcttttggcatattttcgctagtccaaaatcagagatttttgggcaaaaatcttcatccaaaag |
31614771 |
T |
|
| Q |
664 |
aatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaa |
763 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||| |||||||| ||||||| || ||||||||| ||| |
|
|
| T |
31614772 |
aatgttttgaggtttggtatcaagatacagaatccttgagcta-------gatgcaagtactctagacctctagcgatgccaattgcaatttggaacaaa |
31614864 |
T |
|
| Q |
764 |
gtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttt |
863 |
Q |
| |
|
|||||||||| ||||||||||| ||| | ||||||| ||||||| |||||||| ||||||||||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
31614865 |
gtgttccaattaaaatcacaaatagcattaggaaattcacttttgtagatgaaactatccaatgatcctttggacatgaattcatatattagtgctcttt |
31614964 |
T |
|
| Q |
864 |
tgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttt |
963 |
Q |
| |
|
||||| ||||||||||| |||||| |||||| ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
31614965 |
tgttcacctcataacaaaagcctaaaagggatacaatgttcatgtgtaatgttcgactaatgctagcaacttcatttatgaattcttctccatttccctt |
31615064 |
T |
|
| Q |
964 |
tgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatc |
1053 |
Q |
| |
|
||| || |||| ||||||||| ||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
31615065 |
tgactcatttagtactttcaccgccacatgacgaccatcaattaaacttgctttgtacacaacaccatatcctccttggcctaatttatc |
31615154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 164 - 1047
Target Start/End: Original strand, 31618004 - 31618884
Alignment:
| Q |
164 |
acttgtagtggtgacctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcg |
263 |
Q |
| |
|
||||||||| || |||||| || ||| |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31618004 |
acttgtagttctggcctttcgggtgaatataagacaggctttggaggatatgataccgatgaaagtggtccttgcaacatttctattactttattcatcg |
31618103 |
T |
|
| Q |
264 |
gtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaa |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || ||| ||| || || |
|
|
| T |
31618104 |
gtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctgatcatatcattttcttcctccgagattgttgaacaatttaa |
31618203 |
T |
|
| Q |
364 |
aaggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccg |
463 |
Q |
| |
|
||| | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||| |||||||| |
|
|
| T |
31618204 |
aag---agtattcccttgctcaagatccttataaatccaatctggaaagtacatttcagaagtacatgaccctcccgtgtcgtagttcttccttcctccg |
31618300 |
T |
|
| Q |
464 |
atcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatag |
563 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
31618301 |
atcatttcaagaatcaacatgccataactatatacatcagatctgtacgaaactccaccaaacgctctactaaatatttctggtgccatgtatcctatag |
31618400 |
T |
|
| Q |
564 |
ttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaag |
663 |
Q |
| |
|
||||||||| || | |||||| |||||||||||||||||||| || ||||| |||||||||||||| || |||||||||||||| ||||| |||||||| |
|
|
| T |
31618401 |
ttcctcttgcccctaatattgacacaatactatccttcctttggcatattttagctagtccaaaatctgagatttttggacaaaaatcttcatccaaaag |
31618500 |
T |
|
| Q |
664 |
aatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaa |
763 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||| | || ||| |
|
|
| T |
31618501 |
aatgttttgaggttttatatcaagatgtagaatccttgaactacatccttgatgcaagtactctagacctttagcaatgccaattgcaattcgaaacaaa |
31618600 |
T |
|
| Q |
764 |
gtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttt |
863 |
Q |
| |
|
|||||||||| ||||||||||| || | ||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
31618601 |
gtgttccaatcaaaatcacaaatggcattaggaaattcacttttgtagatgaacttatccaatgatcctttgggcatgaattcatatattagcgctcttt |
31618700 |
T |
|
| Q |
864 |
tgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttt |
963 |
Q |
| |
|
||||| | || |||||||| |||| ||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
31618701 |
tgttctcttcgtaacaatatcctaaaagcgacacaatgttcatatgtgatgtcctactaatgctagcaacttcatttatgaattcttctccatttccctt |
31618800 |
T |
|
| Q |
964 |
tgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaa |
1047 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
31618801 |
tgtctcgcttattactttcactgccacttgacgactattatataaacttgctttgtagacaacaccataccctccttggcctaa |
31618884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 20 - 1053
Target Start/End: Original strand, 31584998 - 31586030
Alignment:
| Q |
20 |
tgtatgccagaaccattatttgacaggttacaattatttcattttggcaattattgaactaacaatttaatttaaagatagaacaattaatttgacacag |
119 |
Q |
| |
|
||||||||||| ||| | ||||||| ||||||||||||||||||||| | || |||||||| ||||| ||||| |||| || || ||| ||||| | | |
|
|
| T |
31584998 |
tgtatgccagacccagt-tttgacaagttacaattatttcattttggtacctactgaactaataatttgatttagagatggaccatttagtttgatattg |
31585096 |
T |
|
| Q |
120 |
tgatagaatgtgtctcatacgaatcagatgaaggtatatgcggaacttgtagtggtgacctttctggagaaaataagatgggatttggaggatatgacac |
219 |
Q |
| |
|
| || |||| |||||||| | | || | ||||| |||||| | | ||||| ||||| |||||| |||||||||||| ||| ||||||||||||| ||| |
|
|
| T |
31585097 |
taattgaatttgtctcatcccagtcggttgaagatatatgtgacatttgtactggtggcctttcaagagaaaataagacgggctttggaggatatggcac |
31585196 |
T |
|
| Q |
220 |
cgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatcttt |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||| |||| |||||||||| |
|
|
| T |
31585197 |
tgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctgtccgatggattcgtttgaatgcaccatagacttaccatagtaatcttt |
31585296 |
T |
|
| Q |
320 |
ctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctcaagatccttataaatccaatctggaaaatacattt |
419 |
Q |
| |
|
|||||||| ||||||||||| || || ||||| ||| || ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31585297 |
ctaaccatgtcattttcttcttcggagattgtcaaacaatttaaaagaggttcattaccttgctcaagatccttataaatccaatctggaaagtacattt |
31585396 |
T |
|
| Q |
420 |
cagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacacc |
519 |
Q |
| |
|
|||||| ||| || ||||| ||||| ||||||||| | |||||||| ||||| ||||||| ||||||||||||||| |||||||| |||| |||||| || |
|
|
| T |
31585397 |
cagaagcacatgaacctcctgtgtcgtagttcttcctacctccgataatttctagaatcagcatgccataactatacacatcagacttgtgagaaactcc |
31585496 |
T |
|
| Q |
520 |
accaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgct |
619 |
Q |
| |
|
|||||| |||||| | |||| |||||| ||||||||||||||||||||||||| || || ||||| ||| ||||||||||| || | || ||||||||| |
|
|
| T |
31585497 |
accaaaggctctaatgaatatttctggtgccatatatcctatagttcctcttgcccctagcattgacacagtactatccttctttcggcatatttttgct |
31585596 |
T |
|
| Q |
620 |
agtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgca |
719 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
31585597 |
agtccaaaatcagatatttttggacaaaaatcttcatccaaaagaatgttttggggtttgatatcaagatgcagaatcctcgaactacatccttgatgca |
31585696 |
T |
|
| Q |
720 |
agtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaactt |
819 |
Q |
| |
|
| ||||||| |||||||||||||||| || ||||||||| ||||||||||||| ||||||| | | ||| | ||||||| ||| ||||||| ||||| |
|
|
| T |
31585697 |
aatactctaaacctctagcaatgccaactgcaatttggaacaaagtgttccaatcaaaatcatatatagcattaggaaattggcttctatagataaactt |
31585796 |
T |
|
| Q |
820 |
atccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttcta |
919 |
Q |
| |
|
| |||||||||||| || |||||| |||||||| | ||||||||||||| ||||||| ||| |||||| ||| || |||||||| |||||||||||||| |
|
|
| T |
31585797 |
acccaatgatcctttggacatgaattcatatatcaatgctcttttgttcacctcatagcaaaagcctaaaagtgatacaatgttgatgtgtgatgttcta |
31585896 |
T |
|
| Q |
920 |
ctaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgt |
1019 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||| || | ||| |||||||||||||| ||||| ||||||||||| |||| |||||||| |
|
|
| T |
31585897 |
ctaatgctagaaacttcatttatgaattcttctccatttcccttagtttcatttattactttcaccgccacatgacgaccatcacttaaacatgctttgt |
31585996 |
T |
|
| Q |
1020 |
atacaacaccatatcctccttggcctaatttatc |
1053 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||| |
|
|
| T |
31585997 |
acacaacaccatatcctccttgacctaatttatc |
31586030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 185 - 1064
Target Start/End: Original strand, 31540777 - 31541650
Alignment:
| Q |
185 |
ggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttag |
284 |
Q |
| |
|
|||||| |||||| || ||||||||||||| |||||| |||||||||||| | |||||||| ||||||| |||| | ||||||||| | ||| || | |
|
|
| T |
31540777 |
ggagaatataagaaaggctttggaggatatggcaccgactgaagtggtccttgtagcatttctaatactttactcattgatggtctatcggctggatttg |
31540876 |
T |
|
| Q |
285 |
tttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctc |
384 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||| || | ||| ||| |||||||||| ||||||| |
|
|
| T |
31540877 |
tttgaatgcaccatagactcaccatagtaatcattcttaccatatcattttcttcctttgagtttgctaaacaattagcaaggttattag---cttgctc |
31540973 |
T |
|
| Q |
385 |
aagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatg |
484 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||| || | |||||| ||||| ||||| |
|
|
| T |
31540974 |
aagatccttataaatccaatctggaaaacacatttcagaagtacatgaccctccagtgtcataattctttcttcccccaaccatttctagaattaacata |
31541073 |
T |
|
| Q |
485 |
ccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattg |
584 |
Q |
| |
|
|||||||||||||||||||| || | |||||| |||||| ||| || || ||||||||||| || ||||||||||||||||||||||| ||||||| | |
|
|
| T |
31541074 |
ccataactatatacatcagacttatgagaaactccaccatatgttcggctgaatacttctggtgctatatatcctatagttcctcttgtgccaagtaaag |
31541173 |
T |
|
| Q |
585 |
aaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatc |
684 |
Q |
| |
|
| ||||||||||| |||||||| || | ||| ||||||||||||||||| ||||| || ||||| | ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
31541174 |
acacaatactatcattcctttggcatactttagctagtccaaaatcagagattttggggcaaaaattttcatccaaaagaatgttttgtggtttgatatc |
31541273 |
T |
|
| Q |
685 |
aagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcacaa |
784 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||||||||||| |||||||||| |||||| || | || ||||||| | || || ||||||| ||| |||| |
|
|
| T |
31541274 |
aagatgcaaaattcttgaaatacatccttgatgcaagtattctagtcctcgagcaattccgattgcaatttggtacaatgtcttccaatccaaactacaa |
31541373 |
T |
|
| Q |
785 |
acagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatagc |
884 |
Q |
| |
|
| ||| | | |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| | | |
|
|
| T |
31541374 |
atagcatcatgaaatccacttttaagaatgaacttatccaatgatcctttgggcaagaactcatatattagtgctcttttgtt---ctcataacaaaatc |
31541470 |
T |
|
| Q |
885 |
ctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttcac |
984 |
Q |
| |
|
| | ||| || ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || || ||||| | |||||| |
|
|
| T |
31541471 |
ccaaaagtgagacaatgttcacatgtgatgttctactaatgctagcaacttcatttatgaaatcttctccatttcccttagactcatttataattttcac |
31541570 |
T |
|
| Q |
985 |
tgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatgagt |
1064 |
Q |
| |
|
||| |||||||||||||| | ||| |||||||||| |||||||||||||||||||| ||||||||||| ||||| |||| |
|
|
| T |
31541571 |
tgctacttgacgaccatcaggtaagtttgctttgtaaacaacaccatatcctccttgacctaatttatctcgaaacgagt |
31541650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 226 - 1064
Target Start/End: Complemental strand, 31573266 - 31572441
Alignment:
| Q |
226 |
aagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaacc |
325 |
Q |
| |
|
|||||||||||| | |||||||| ||||||| |||||| |||||||||| |||| || |||||||||||||||||||| |||| ||| | |||||| ||| |
|
|
| T |
31573266 |
aagtggtccttgtagcatttctaatactttactcatcgatggtctatctaatgggttcgtttgaatgcaccatagactaaccatagttaactttcttacc |
31573167 |
T |
|
| Q |
326 |
atatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaag |
425 |
Q |
| |
|
|||||| |||||||||| || || | || || | || ||||||| | | |||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
31573166 |
atatcagtttcttcctcggagtttgctaaaccattcacaaagttattact---tagctcaagatcattataaatccaatctggaaagtacatttcagaag |
31573070 |
T |
|
| Q |
426 |
tacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaa |
525 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| || |||||||| | ||| ||||| ||||| ||||||||| |||| |||||| |||||||| |
|
|
| T |
31573069 |
tacacgaccctcctgtgtcatagttctttcttccaccaatcatttctaaaattaacataccata------tacatcagacttgtgagaaactccaccaaa |
31572976 |
T |
|
| Q |
526 |
tgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtcca |
625 |
Q |
| |
|
|||| ||||||||||| ||||| || |||||||||||||| ||||| |||||||| || |||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
31572975 |
cactctgctaaatacttcaggagctatgtatcctatagttccccttgtgccaagtatggacacaatactatccttcctttggcatatttgagctagtcca |
31572876 |
T |
|
| Q |
626 |
aaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtact |
725 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||| | |
|
|
| T |
31572875 |
aaatcagagatttttgggcaaaaatcttcatccaaaagaatgttttg-ggttttatatcaagatgcaaaatccttgaaatacatccttgttgcaagtatt |
31572777 |
T |
|
| Q |
726 |
ctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaa |
825 |
Q |
| |
|
| ||||||||||| ||||| | || |||| || | || |||||||||| |||| ||||| || |||||||||||||||| |||||||||| || | |
|
|
| T |
31572776 |
cgagtcctctagctatgcctattgcaattcggtacaacgtgttccaatccaaattacaaagtgcactaggaaatccacttttaaagatgaacttgtctag |
31572677 |
T |
|
| Q |
826 |
tgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatg |
925 |
Q |
| |
|
||| || | |||||||| |||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| |||||||||||||||||| |
|
|
| T |
31572676 |
tgaaccatttggcatgaattcatatattagtgctcttttgttc---tcataacagaaacccaaaagtgagacaatgttcacatgtgatgttctactaatg |
31572580 |
T |
|
| Q |
926 |
ctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaa |
1025 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||| || ||||||||||||||||| || |||||||||| |||||| | |||| |||||||||| || | |
|
|
| T |
31572579 |
ctagcaacttcatttatgaattcttctccatctcccttagattcgtttattactttaaccgccacttgacaaccatcaggtaaacttgctttgtacacga |
31572480 |
T |
|
| Q |
1026 |
caccatatcctccttggcctaatttatcccgaaatgagt |
1064 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
31572479 |
caccatatcctccttaacctaatttatctcgaaatgagt |
31572441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 177 - 1069
Target Start/End: Complemental strand, 31439498 - 31438609
Alignment:
| Q |
177 |
acctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctga |
276 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||| | | || |||||||||||| | |||||||||||||||| |||| | |||||| ||||| |
|
|
| T |
31439498 |
acctttctggagaaaataagacgggctttggaggatacggtattgaatgaagtggtccttgtagcatttctattactttactcattgatggtctctctga |
31439399 |
T |
|
| Q |
277 |
tggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattatta |
376 |
Q |
| |
|
||| || |||||||||||||||| |||||||| ||||||||| | || |||||||||||||| || || ||| | | || |||| | ||||| |
|
|
| T |
31439398 |
tggatttgtttgaatgcaccataaactcaccatagtaatcttctttacgatatcattttcttcttcggagattgttaaattatttgaaag---agtatta |
31439302 |
T |
|
| Q |
377 |
ccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaa |
476 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||| |||||||||| || ||||||| ||| ||| |||| || ||||| | ||||| ||| |
|
|
| T |
31439301 |
ccttgctcaagatccttatatatccaatccggaaagtacatttcagtcatatcagaccctctagtatcacgactctttctttctccggttatttcgagag |
31439202 |
T |
|
| Q |
477 |
tcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtacc |
576 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||| ||||||||||||| ||| ||||| || || || || | ||||||||||||||||| || |
|
|
| T |
31439201 |
tcaacatgccataactgtatacatcagacttagaagaaactccaccaaatgctcgactgaatacctcgggtgctatgaagcctatagttcctcttgtgcc |
31439102 |
T |
|
| Q |
577 |
aagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggt |
676 |
Q |
| |
|
||||| ||||||| ||| || ||| ||||||| ||||| ||||| ||||||||||| |||||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
31439101 |
aagtagggaaacaacactctctttcttttgacatattttagctagaccaaaatcagatatttttggacaaaaatcttcatctaaaagaatgttttgaggt |
31439002 |
T |
|
| Q |
677 |
ttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaa |
776 |
Q |
| |
|
|||||||||||||||| ||| |||||| |||| |||||||| ||||||||||||||||||||||||| || || ||| ||||| | |||||||||| | |
|
|
| T |
31439001 |
ttgatatcaagatgcaaaattcttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatcca |
31438902 |
T |
|
| Q |
777 |
aatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcata |
876 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||| ||||||||||| ||||| || | || |||||| |||||||| | ||| ||||||||| ||||| |
|
|
| T |
31438901 |
aatcacaaatagcatttggaaatccacttttatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcata |
31438802 |
T |
|
| Q |
877 |
acaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttatt |
976 |
Q |
| |
|
|||| | || | ||| || ||||||||| ||||||||| |||| ||||| |||||||||||||| |||||||| || | ||| || | || ||||| |
|
|
| T |
31438801 |
acaaaaacccaaaagtgagacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttatt |
31438702 |
T |
|
| Q |
977 |
actttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatgagtctgtg |
1069 |
Q |
| |
|
|||||||| || || ||||| ||||| | |||| |||||||||| |||||||||||||||||||| || || ||||| |||||||||| |||| |
|
|
| T |
31438701 |
actttcaccgcaacatgacggccatcaggtaaacttgctttgtacacaacaccatatcctccttgacccaacttatctcgaaatgagtttgtg |
31438609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 226 - 710
Target Start/End: Complemental strand, 33305578 - 33305100
Alignment:
| Q |
226 |
aagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaacc |
325 |
Q |
| |
|
|||||||||||| | ||||||||| |||||| |||| | ||||||||||||||| || |||||||||||||| ||||| | || |||||||||||| || |
|
|
| T |
33305578 |
aagtggtccttgaagcatttctatcactttactcattgatggtctatctgatggattcgtttgaatgcaccaaagactaatcatagtaatctttcttgcc |
33305479 |
T |
|
| Q |
326 |
atatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaag |
425 |
Q |
| |
|
|||||||||||||| ||||| || ||| |||| |||||||| | | ||||||||||||||||||||||||||| ||| |||||||| || | |
|
|
| T |
33305478 |
atatcattttcttcttctgagtttgcagaacaattaa---ggttattact---tagctcaagatccttataaatccaatctgaaaagtacatttccgatg |
33305385 |
T |
|
| Q |
426 |
tacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaa |
525 |
Q |
| |
|
|||| |||||||| |||||||| ||||| |||| ||||||||||| || || ||||| |||||||| |||||||| || || | |||||| |||||||| |
|
|
| T |
33305384 |
tacatgaccctcccgtgtcataattctttcttcccccgatcatttctagtattaacataccataactgtatacatcggacttatgagaaactccaccaaa |
33305285 |
T |
|
| Q |
526 |
tgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtcca |
625 |
Q |
| |
|
|| || |||||||||||| || || || ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||| ||||||||| |
|
|
| T |
33305284 |
tgttcgactaaatacttccggtgctatgtatcctatagttcctcttgtaccaagtatggatacaatgctatccttcctttgacatatttgagctagtcca |
33305185 |
T |
|
| Q |
626 |
aaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatc |
710 |
Q |
| |
|
||||| || |||||||| ||||| |||| ||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||| |
|
|
| T |
33305184 |
aaatctgagatttttgggcaaaaatcttaatccaaaagaatgttttggggtttgacatcaagatgcaaaatccttgaaatacatc |
33305100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 185 - 615
Target Start/End: Original strand, 31532151 - 31532581
Alignment:
| Q |
185 |
ggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttag |
284 |
Q |
| |
|
|||||| |||||| || ||||||||||||| ||| || |||||||||||| | ||||||| |||||||| |||| | ||||||||| ||||| || | |
|
|
| T |
31532151 |
ggagaatataagaaaggctttggaggatatggcactgactgaagtggtccttgtagcatttctgttactttactcattgatggtctatcggatgggtttg |
31532250 |
T |
|
| Q |
285 |
tttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgctc |
384 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| | | | | || | |||||||||||||||||| || |
|
|
| T |
31532251 |
tttgaatgcaccataaactcaccatagtaatctttctcaccatatcattttcttcctctgaattttctaaataattcacaaggttattattaccttgttc |
31532350 |
T |
|
| Q |
385 |
aagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacatg |
484 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||||| ||||| |
|
|
| T |
31532351 |
aagatccttataaatccagtcaggaaagtacatttcagaagtacatgaccctccagtgtcataattctttcttcctccaatcatttctagaattaacatc |
31532450 |
T |
|
| Q |
485 |
ccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtattg |
584 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||| |||||| ||| || |||||| |||||||| || || |||||||| ||||||||||| |||||||| | |
|
|
| T |
31532451 |
ccataactgtatacatcagacttgtgagaaactccaccatatgttcgactaaacacttctggtgctatgtatcctatggttcctcttgtgccaagtatag |
31532550 |
T |
|
| Q |
585 |
aaacaatactatccttcctttgacaaatttt |
615 |
Q |
| |
|
| |||||||| || ||| |||| || ||||| |
|
|
| T |
31532551 |
acacaatactgtcattcttttggcatatttt |
31532581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 663 - 1064
Target Start/End: Original strand, 31532595 - 31532993
Alignment:
| Q |
663 |
gaatgttttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaa |
762 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||| | || ||||||| | || |
|
|
| T |
31532595 |
gaatgttttgtggtttgatatcaagatgcaaaatccttgaattacatccttgatgcaagtattctagtccttgagcaatgccgattgcaatttggtacaa |
31532694 |
T |
|
| Q |
763 |
agtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctctt |
862 |
Q |
| |
|
| |||||||| ||| ||||| ||| | ||| || |||||||| |||||| ||||| ||||||||| || |||||| |||||||||||||||||| |
|
|
| T |
31532695 |
tgcgttccaatctaaactacaaatagcatcaggcaacccacttttgaggatgaatttatctaatgatcctctggacatgaattcatatattagtgctctt |
31532794 |
T |
|
| Q |
863 |
ttgttcccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttcctt |
962 |
Q |
| |
|
||||| |||||| ||| | || | ||| || || |||||| |||||||||||||||||||| |||||||||||| |||||||||| | |||||| | |
|
|
| T |
31532795 |
ttgtt---ctcatagcaaaaacccaaaagtgaaacgatgttcacatgtgatgttctactaatgcttgcaacttcatttgtgaattcttctctatttccct |
31532891 |
T |
|
| Q |
963 |
ttgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatga |
1062 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||||||||| | ||| |||||||||| || | ||||||||||||||| || ||| | || |||||||| |
|
|
| T |
31532892 |
ttgactcgtttattactttcaccgccacttcacgaccatcaggtaagtttgctttgtaaaccataccatatcctccttgacccaatctgtctcgaaatga |
31532991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 764 - 1064
Target Start/End: Complemental strand, 33305068 - 33304766
Alignment:
| Q |
764 |
gtgttccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttt |
863 |
Q |
| |
|
|||||||||| |||||||||| ||| | |||| |||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||| || ||||||| |
|
|
| T |
33305068 |
gtgttccaatccaaatcacaaatagcatcaggagatccacttatatggatgaacttatccaatgatcctttgggcatgaattcatatatcagagctcttt |
33304969 |
T |
|
| Q |
864 |
tgttcccctcataacaatagcctacaagggacacaatgttcg--tgtg---tgatgttctactaatgctagcaacttcatttatgaattcttccccattt |
958 |
Q |
| |
|
||||| ||||||||| | || | ||| || ||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
33304968 |
tgttc---tcataacaaaaacccaaaagtgagacaatgttcacatgtgacgtgacgttctactaatgctagcaacttcatttataaattcttctccattt |
33304872 |
T |
|
| Q |
959 |
ccttttgattcgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaa |
1058 |
Q |
| |
|
|| || || || |||||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
33304871 |
cccttggactcttttattactttcactgccacttgacgaccatcaggtaagcttgctttgtacacaacaccatatcctccttgacctaatttatctcgaa |
33304772 |
T |
|
| Q |
1059 |
atgagt |
1064 |
Q |
| |
|
|||||| |
|
|
| T |
33304771 |
atgagt |
33304766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 611 - 732
Target Start/End: Complemental strand, 21898334 - 21898213
Alignment:
| Q |
611 |
atttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatc |
710 |
Q |
| |
|
||||| || ||||||||||||| |||||||| ||||| || || |||| |||||||| || || |||||||| ||||||| |||||| ||| ||||| |
|
|
| T |
21898334 |
attttcgccagtccaaaatcagcgatttttgggcaaaaatcatcatccagcagaatgttgtggggcttgatatccagatgcacaatcctcgaagcacatc |
21898235 |
T |
|
| Q |
711 |
cttgatgcaagtactctagtcc |
732 |
Q |
| |
|
||||||||||||| || ||||| |
|
|
| T |
21898234 |
cttgatgcaagtagtccagtcc |
21898213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 21898662 - 21898582
Alignment:
| Q |
265 |
tggtctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctga |
345 |
Q |
| |
|
|||||||||||| | |||| |||||||||||||||| ||||| ||||||||||| | |||||||| ||||||||||| |
|
|
| T |
21898662 |
tggtctatctgacgctttaaactgaatgcaccatagacacaccatagtaatctttcgtattatatcattctcttcctctga |
21898582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 583; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 583; E-Value: 0
Query Start/End: Original strand, 169 - 1053
Target Start/End: Complemental strand, 52174800 - 52173919
Alignment:
| Q |
169 |
tagtggtgacctttctggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggt |
268 |
Q |
| |
|
|||||||| | |||| ||| || |||||| ||| ||||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
52174800 |
tagtggtggcgtttcaggataacataagacgggctttggaggatatggcactgatgaaagtggcccttccaacatttctattactttattcatctgtggt |
52174701 |
T |
|
| Q |
269 |
ctatctgatggtttagtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggt |
368 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| || |||| |
|
|
| T |
52174700 |
ctatccgatggtttcgtttgaatgcaccatagactcaccaaagtaatctttataaccatatcattttcttcctctgagattgtcaaacaatttgaaag-- |
52174603 |
T |
|
| Q |
369 |
tattattaccttgctcaagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcat |
468 |
Q |
| |
|
| |||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
52174602 |
-agtatttccttgctcaagatccttataaatccagtctggaaagtacatttctgaagtacatgaccctccagtgtcatagttctttcttcctccaatcat |
52174504 |
T |
|
| Q |
469 |
ttcaagaatcaacatgccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcct |
568 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
52174503 |
ttcaagaatcaacatgccataactgtatatatcagatttgtaagaaacaccaccaaatgctctactatatacttctggcgccatatatcctatagttcct |
52174404 |
T |
|
| Q |
569 |
cttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgt |
668 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| ||||||| ||||| |
|
|
| T |
52174403 |
cttgtgccaagtattgacacaacactatccttcctttggcatatttttgctagtccgaaatcagatatttttgggcaaaagtcttcatccaaaataatgt |
52174304 |
T |
|
| Q |
669 |
tttgaggtttgatatcaagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgtt |
768 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||| |
|
|
| T |
52174303 |
tttgaggtttgatatcaagatgcaaaatccttgaactacatccttgatgcaagtactctagtcctttagcaatgccaattgcaatttggaacaaagtgtt |
52174204 |
T |
|
| Q |
769 |
ccaatgaaaatcacaaacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttgttc |
868 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
52174203 |
ccaattaaaatcacaaacagcttcagaaaatccacttttatagatgaactgatccaatgatccttggcgcatgaattcatatattagtgctcttttgttc |
52174104 |
T |
|
| Q |
869 |
ccctcataacaatagcctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttgatt |
968 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| | | |
|
|
| T |
52174103 |
acctcataacaatagcctaaaagtgacacaatgttcacgtgtgatgttctactaatgctagcaacttcatttatgaattcttctccatccccctttaact |
52174004 |
T |
|
| Q |
969 |
cgtttattactttcactgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatc |
1053 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52174003 |
cgtttattactttaacagccacttgacgaccatcaggtaaacttgctttgtatacaacaccatatcctccttggcctaatttatc |
52173919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 49710886 - 49710780
Alignment:
| Q |
542 |
tctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttg |
641 |
Q |
| |
|
|||||||| ||||||||| ||||| |||| ||||| |||||| ||||| || || || ||| |||| ||||| || ||||||||||| |||||||||| |
|
|
| T |
49710886 |
tctggagcaatatatcctggtgttccccttgcaccaaatattgatacaatgctttcttttcttagacatattttagcaagtccaaaatctgaaatttttg |
49710787 |
T |
|
| Q |
642 |
gacaaaa |
648 |
Q |
| |
|
||||||| |
|
|
| T |
49710786 |
gacaaaa |
49710780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 645
Target Start/End: Complemental strand, 49683276 - 49683173
Alignment:
| Q |
542 |
tctggagccatatatcctatagttcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttg |
641 |
Q |
| |
|
|||||||| ||||||||| || || |||| ||||| |||||| ||||| || || || ||| |||| ||||| || ||||||||||| |||||||||| |
|
|
| T |
49683276 |
tctggagcaatatatcctggtgtcccccttgcaccaaatattgatacaatgctttcttttcttggacatattttagcaagtccaaaatctgaaatttttg |
49683177 |
T |
|
| Q |
642 |
gaca |
645 |
Q |
| |
|
|||| |
|
|
| T |
49683176 |
gaca |
49683173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 252; Significance: 1e-139; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 184 - 1069
Target Start/End: Complemental strand, 15063838 - 15062956
Alignment:
| Q |
184 |
tggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggttta |
283 |
Q |
| |
|
||||||||||||||| || |||||||||||| | || |||||| ||||||| |||||||||||||||| |||| | |||||| |||||||| || |
|
|
| T |
15063838 |
tggagaaaataagataggctttggaggatattgtattgaatgaagtggcccttgcagcatttctattactttactcattgatggtctgtctgatggattc |
15063739 |
T |
|
| Q |
284 |
gtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgct |
383 |
Q |
| |
|
|||||||| ||||| | | ||||| ||||||||| | | ||||||||||||||| ||||| || || || || |||||| |||| ||||||| |
|
|
| T |
15063738 |
gtttgaatacaccacaaagccaccatagtaatcttctttagcatatcattttcttcttctgagattgccaaactatttaaaagggaatta---ccttgct |
15063642 |
T |
|
| Q |
384 |
caagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacat |
483 |
Q |
| |
|
||||||||||| | |||||||| ||||| || ||| | ||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
15063641 |
caagatccttaaatatccaatccggaaagtatgcttcggttgtatgagacccgccagtgtcataattcttttttcctccggtcatttcaagaatcaacat |
15063542 |
T |
|
| Q |
484 |
gccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtatt |
583 |
Q |
| |
|
||||||||| ||||||||||| || ||||||| ||||||| |||| |||||||||||| || | || || ||||||||||||||||| ||||| || |
|
|
| T |
15063541 |
gccataactgtatacatcagacttagaagaaactgcaccaaaagctcgactaaatacttccggtgatatgtagcctatagttcctcttgtcccaagcatg |
15063442 |
T |
|
| Q |
584 |
gaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatat |
683 |
Q |
| |
|
|| |||| ||| || ||| ||||||| ||||| || || ||||||||||| |||||||| ||||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
15063441 |
gacacaacactctctttcttttgacatattttagcaagaccaaaatcagatatttttgggcaaaaatcttcatctaaaagaatgttttgaggtttgatat |
15063342 |
T |
|
| Q |
684 |
caagatgcagaatccttgaactacatccttgatgcaagtactctagtcctctagcaatgccaagtgtaatttggaaaaaagtgttccaatgaaaatcaca |
783 |
Q |
| |
|
||||||||| ||| |||||| |||| |||||||| || |||||||| |||| ||||||||||| | |||||||| || |||||||||| |||||||| |
|
|
| T |
15063341 |
caagatgcaaaattcttgaaatacaaccttgatgtaaatactctagacctcgagcaatgccaattacgatttggaataatgtgttccaatccaaatcaca |
15063242 |
T |
|
| Q |
784 |
aacagcttgaggaaatccacttttatagatgaacttatccaatgatccttggggcatgaactcatatattagtgctcttttgttcccctcataacaatag |
883 |
Q |
| |
|
|| ||| | |||||||||||||| || ||||||||||| |||||||| | || |||||| |||||||| | ||||||||||||| |||||||||| | |
|
|
| T |
15063241 |
aatagcatttggaaatccacttttgtatatgaacttatctaatgatccattggacatgaattcatatatcaatgctcttttgttcttctcataacaaaaa |
15063142 |
T |
|
| Q |
884 |
cctacaagggacacaatgttcgtgtgtgatgttctactaatgctagcaacttcatttatgaattcttccccatttccttttgattcgtttattactttca |
983 |
Q |
| |
|
|| | ||| || |||| |||| | ||||||||| | | ||||| |||||||||||||| |||||||| || ||||| || | ||| |||| ||||||| |
|
|
| T |
15063141 |
cccaaaagtgaaacaacgttcatatgtgatgtttttgttatgcttgcaacttcatttataaattcttctccgtttcccttgcactcgcttatcactttca |
15063042 |
T |
|
| Q |
984 |
ctgccacttgacgaccatcggataaaattgctttgtatacaacaccatatcctccttggcctaatttatcccgaaatgagtctgtg |
1069 |
Q |
| |
|
| || || ||||| ||||| | |||| | |||||||| ||||||||||||||||||||||| || ||||| ||||| |||| |||| |
|
|
| T |
15063041 |
ccgctacatgacggccatcaggtaaactggctttgtaaacaacaccatatcctccttggcccaacttatctcgaaacgagtttgtg |
15062956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 565 - 686
Target Start/End: Original strand, 29083976 - 29084098
Alignment:
| Q |
565 |
tcctcttgtaccaagtattgaaacaatactatccttcctttgacaaatttttgctagtccaaaatc--agaaatttttggacaaaagtcttcgtccaaaa |
662 |
Q |
| |
|
|||| |||| |||||||| || |||||||||| ||| |||||| ||||| |||||||||||||| ||| ||||||| ||||| || || ||||||| |
|
|
| T |
29083976 |
tcctattgtgccaagtatagacacaatactatgattctcttgacatattttagctagtccaaaatcttagatttttttgg-caaaaatcgtcatccaaaa |
29084074 |
T |
|
| Q |
663 |
gaatgttttgaggtttgatatcaa |
686 |
Q |
| |
|
|||||||||| ||||||||||||| |
|
|
| T |
29084075 |
gaatgttttggggtttgatatcaa |
29084098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 29083729 - 29083786
Alignment:
| Q |
284 |
gtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcct |
341 |
Q |
| |
|
||||||||| || ||||||||| || ||||||| ||| ||||||||||||||||||| |
|
|
| T |
29083729 |
gtttgaatgtacgatagactcatcattgtaatctatctcaccatatcattttcttcct |
29083786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 127; Significance: 5e-65; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 184 - 668
Target Start/End: Original strand, 1696 - 2177
Alignment:
| Q |
184 |
tggagaaaataagatgggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggttta |
283 |
Q |
| |
|
||||||||||||||| || |||||||||||| | || |||||| ||||||| |||||||||||||||| |||| | ||| ||||||||||| || |
|
|
| T |
1696 |
tggagaaaataagataggctttggaggatattgtattgaatgaagtggcccttgcagcatttctattactttactcattgatggactatctgatggattc |
1795 |
T |
|
| Q |
284 |
gtttgaatgcaccatagactcaccaaagtaatctttctaaccatatcattttcttcctctgacgatgtcatacagttaaaaaggttattattaccttgct |
383 |
Q |
| |
|
|||||||| ||||| | || ||||| ||||||||| | | ||||||||||||||| ||||| || ||||| || ||||| | ||||||||||| |
|
|
| T |
1796 |
gtttgaatacaccacaaacccaccatagtaatcttctttagcatatcattttcttcttctgagattgccatactatttaaaag---agaattaccttgct |
1892 |
T |
|
| Q |
384 |
caagatccttataaatccaatctggaaaatacatttcagaagtacacgaccctccagtgtcatagttcttctttcctccgatcatttcaagaatcaacat |
483 |
Q |
| |
|
||||||||||| | |||||||| | ||| || |||| | | | ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
1893 |
caagatccttaaatatccaatccgaaaagtatgtttcggctgcaagagacccgccagtgtcataattcttttttcctccggtcatttcaagaatcaacat |
1992 |
T |
|
| Q |
484 |
gccataactatatacatcagatttgtaagaaacaccaccaaatgctctactaaatacttctggagccatatatcctatagttcctcttgtaccaagtatt |
583 |
Q |
| |
|
||||||||| ||||||||||| || ||||||| ||||||| |||| |||||||||||| || | || || ||||||||||||||||| ||||| || |
|
|
| T |
1993 |
gccataactgtatacatcagacttagaagaaactgcaccaaaagctcgactaaatacttccggtgatatgtagcctatagttcctcttgtcccaagcatg |
2092 |
T |
|
| Q |
584 |
gaaacaatactatccttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgt |
668 |
Q |
| |
|
|| |||| ||| || ||| ||||||| ||||| || || ||||||||||| |||||||| ||||| ||||| || |||||||||| |
|
|
| T |
2093 |
gacacaacactctctttcttttgacatattttagcaagaccaaaatcagatatttttgggcaaaaatcttcatctaaaagaatgt |
2177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 732
Target Start/End: Original strand, 31189590 - 31189709
Alignment:
| Q |
613 |
ttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggtttgatatcaagatgcagaatccttgaactacatcct |
712 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| || | || || ||||||||||| || ||||| || || | ||| | ||| |||| |||||||| |
|
|
| T |
31189590 |
ttttgcaagtccaaaatctgaaatttttggacataaattctcatctaaaagaatgttatgtggttttatgtcgaaatgtaaaattcttgtggtacatcct |
31189689 |
T |
|
| Q |
713 |
tgatgcaagtactctagtcc |
732 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
31189690 |
ctatgcaagtactctagtcc |
31189709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 613 - 678
Target Start/End: Original strand, 31145532 - 31145597
Alignment:
| Q |
613 |
ttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggttt |
678 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||| |||| ||| || ||||||||||| || ||||| |
|
|
| T |
31145532 |
ttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggttt |
31145597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 613 - 678
Target Start/End: Original strand, 31171845 - 31171910
Alignment:
| Q |
613 |
ttttgctagtccaaaatcagaaatttttggacaaaagtcttcgtccaaaagaatgttttgaggttt |
678 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||| |||| ||| || ||||||||||| || ||||| |
|
|
| T |
31171845 |
ttttgcaagtccaaaatctgaaatctttggacataagttttcatctaaaagaatgttatgtggttt |
31171910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 648
Target Start/End: Original strand, 31201383 - 31201432
Alignment:
| Q |
599 |
ttcctttgacaaatttttgctagtccaaaatcagaaatttttggacaaaa |
648 |
Q |
| |
|
|||||| |||||| |||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
31201383 |
ttccttggacaaagttttgcaagtccaaaatctgaaatctttggacaaaa |
31201432 |
T |
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