View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16622_low_16 (Length: 336)
Name: NF16622_low_16
Description: NF16622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16622_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 32875374 - 32875691
Alignment:
| Q |
1 |
ttaattttggtttggttgagtctcattaggttatggtggacgcagatgcacctagccctagtaacccttttttgaaggaatacttgcattggtgagttat |
100 |
Q |
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| T |
32875374 |
ttaattttggtttggttgagtctcattaggttatggtggacgcagatgcacctagccctagtaacccttttttgaaggaatacttgcattggtgagttat |
32875473 |
T |
|
| Q |
101 |
attgtctctttctttggtaaaactaaaagcaattgtgtaattaaaagtaaatggaagatcaaattgtttagacttatatacttttgttattattcttccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875474 |
attgtctctttctttggtaaaactaaaagcaattgtgtaattaaaagtaaatggaagatcaaattgtttagacttatatacttttgttattattcttccc |
32875573 |
T |
|
| Q |
201 |
tcttaaacgaaattgcaggatggtgacggatattccagcaacaacaagtgcaagctttggtatgtacaaatattgtttgtataacttgttccacatgttt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32875574 |
tcttaaacgaaattgcaggatggtgacggatattccagcaacaacaagtgcaagctttggtatgtacaactattgtttgtataacttgttccacatgttt |
32875673 |
T |
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| Q |
301 |
aaatttagcctatggaca |
318 |
Q |
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|||||||||||||||||| |
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| T |
32875674 |
aaatttagcctatggaca |
32875691 |
T |
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