View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16622_low_22 (Length: 247)
Name: NF16622_low_22
Description: NF16622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16622_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 41350826 - 41350607
Alignment:
| Q |
18 |
gaagcttctgtgacttcctaataataaacctgaaccaaacatatatgattaatgtgattatataataggttatatagaaatcggtgtagtgggttaaatt |
117 |
Q |
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| T |
41350826 |
gaagcttctgtgacttcctaataataaacctgaaccaaacatatatgattaatgtgattatataataggttatatagaaatcggtgtagtgggttaaatt |
41350727 |
T |
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| Q |
118 |
aaggctatatatgaaggagctatgaaagttccaacttccaaacttctgttttagatagtaattaagcaagcaggcacttgaatttctttccgttgaaatc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41350726 |
aaggctatatatgaaggagctatgaaagttccaacttccaaacttctgttttagatagtaattaagcaagcaggcacttgaatttctttcagttgaaatc |
41350627 |
T |
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| Q |
218 |
tttgttaaatctgtgctcct |
237 |
Q |
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|||||||||| |||| |||| |
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| T |
41350626 |
tttgttaaatttgtgttcct |
41350607 |
T |
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