View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16624_low_16 (Length: 312)
Name: NF16624_low_16
Description: NF16624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16624_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 298
Target Start/End: Original strand, 49006597 - 49006875
Alignment:
| Q |
20 |
ctacttgacattacttctaacaacgaccagttgaactatatattttctccaaaactcacatatacctacactaatgtcatgaatggtttcagcgcaagtt |
119 |
Q |
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| T |
49006597 |
ctacttgacattacttctaacaacgaccagttgagctatatattttctccaaaactcacatatacctacactaatgtcatgaatggtttcagcgcaagtt |
49006696 |
T |
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| Q |
120 |
tgtctcctttagagcttaaagctctgaaaaccactcccggatatatttcatccataagggatttacctatcaaaccagacacaacgcactcacctcactt |
219 |
Q |
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||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
49006697 |
tgtctcctttaaagcttgaagctctgaaaaccactcccggatatatttcatccataagggatttacctatcaaaccagacacaacacactcacctcactt |
49006796 |
T |
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| Q |
220 |
cattggcctcaatcctgttttcggaacatggcctacaacacaatatggaaaaaacgtcatcattggtttaattgacagt |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
49006797 |
cattggcctcaatcctgttttcggaacatggcctacaacacaatatggaaaaaacatcatcattggtttaattgacagt |
49006875 |
T |
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