View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16625_low_6 (Length: 353)

Name: NF16625_low_6
Description: NF16625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16625_low_6
NF16625_low_6
[»] chr7 (42 HSPs)
chr7 (9-201)||(19590884-19591076)
chr7 (9-203)||(32004606-32004800)
chr7 (9-201)||(38859000-38859192)
chr7 (9-206)||(2658828-2659025)
chr7 (9-201)||(37787126-37787318)
chr7 (9-195)||(35288903-35289089)
chr7 (9-197)||(34533789-34533977)
chr7 (9-196)||(19830779-19830965)
chr7 (12-198)||(23952727-23952914)
chr7 (9-176)||(29099869-29100036)
chr7 (9-192)||(4641803-4641983)
chr7 (34-197)||(19830418-19830580)
chr7 (34-196)||(37786766-37786927)
chr7 (34-195)||(19590525-19590685)
chr7 (34-197)||(35289286-35289448)
chr7 (34-192)||(29100236-29100393)
chr7 (34-196)||(38858642-38858803)
chr7 (34-197)||(34534176-34534338)
chr7 (34-195)||(32004999-32005159)
chr7 (34-198)||(2659225-2659388)
chr7 (34-197)||(4478085-4478247)
chr7 (34-189)||(23953114-23953268)
chr7 (34-192)||(4641443-4641600)
chr7 (79-199)||(38160947-38161067)
chr7 (69-194)||(28584341-28584466)
chr7 (69-197)||(28583437-28583565)
chr7 (9-96)||(4477800-4477887)
chr7 (34-127)||(9181600-9181692)
chr7 (34-107)||(35578986-35579058)
chr7 (35-107)||(9393823-9393894)
chr7 (34-201)||(34595158-34595324)
chr7 (34-200)||(7732483-7732648)
chr7 (34-90)||(32427406-32427461)
chr7 (34-101)||(27245297-27245364)
chr7 (34-205)||(48247977-48248148)
chr7 (34-76)||(26026437-26026478)
chr7 (34-127)||(25637584-25637676)
chr7 (34-71)||(26048071-26048108)
chr7 (34-71)||(28687885-28687922)
chr7 (34-107)||(35579272-35579344)
chr7 (34-102)||(24929689-24929757)
chr7 (34-102)||(33880971-33881038)
[»] chr4 (69 HSPs)
chr4 (9-206)||(22434168-22434365)
chr4 (9-195)||(45082783-45082969)
chr4 (9-195)||(46193405-46193591)
chr4 (9-197)||(15523233-15523421)
chr4 (9-198)||(20470870-20471059)
chr4 (9-195)||(25447247-25447433)
chr4 (9-198)||(23494802-23494991)
chr4 (9-201)||(4219918-4220110)
chr4 (9-197)||(51021155-51021342)
chr4 (9-195)||(12234688-12234874)
chr4 (14-192)||(48526545-48526723)
chr4 (9-197)||(54995067-54995255)
chr4 (9-196)||(11153145-11153332)
chr4 (9-193)||(2118295-2118480)
chr4 (9-209)||(25938030-25938230)
chr4 (9-192)||(18751602-18751785)
chr4 (9-160)||(12503471-12503622)
chr4 (34-196)||(15523619-15523780)
chr4 (34-197)||(25447621-25447783)
chr4 (34-201)||(25937664-25937830)
chr4 (34-193)||(33109686-33109844)
chr4 (34-193)||(38962204-38962362)
chr4 (34-200)||(11153532-11153697)
chr4 (35-198)||(12234326-12234488)
chr4 (34-193)||(46193790-46193948)
chr4 (34-199)||(22434563-22434725)
chr4 (69-197)||(33109883-33110011)
chr4 (34-193)||(23494445-23494603)
chr4 (35-193)||(4219559-4219716)
chr4 (34-200)||(51020792-51020957)
chr4 (34-196)||(48526195-48526355)
chr4 (34-196)||(22170322-22170482)
chr4 (81-198)||(18763951-18764068)
chr4 (78-199)||(20958288-20958408)
chr4 (34-198)||(45082429-45082590)
chr4 (81-197)||(48713777-48713893)
chr4 (34-197)||(54995453-54995614)
chr4 (34-192)||(2118681-2118837)
chr4 (78-195)||(35363028-35363146)
chr4 (78-176)||(43243708-43243806)
chr4 (69-192)||(16690939-16691062)
chr4 (67-196)||(10258304-10258433)
chr4 (69-195)||(16691491-16691616)
chr4 (81-197)||(48293592-48293708)
chr4 (69-176)||(43281210-43281316)
chr4 (69-195)||(48294961-48295088)
chr4 (34-127)||(12503821-12503913)
chr4 (78-194)||(44892576-44892692)
chr4 (89-197)||(48708293-48708401)
chr4 (69-137)||(43242328-43242396)
chr4 (34-107)||(17504061-17504133)
chr4 (83-160)||(20957224-20957301)
chr4 (125-196)||(16318251-16318322)
chr4 (69-194)||(44890518-44890643)
chr4 (34-96)||(17504345-17504407)
chr4 (34-96)||(35193406-35193467)
chr4 (78-131)||(44220805-44220858)
chr4 (87-195)||(55189528-55189636)
chr4 (25-107)||(40160468-40160549)
chr4 (15-53)||(10795692-10795730)
chr4 (34-76)||(12593143-12593184)
chr4 (34-96)||(14439926-14439988)
chr4 (34-127)||(18965208-18965300)
chr4 (34-76)||(46736774-46736815)
chr4 (34-126)||(229545-229636)
chr4 (34-71)||(26974407-26974444)
chr4 (34-127)||(34789450-34789542)
chr4 (34-71)||(45838933-45838970)
chr4 (34-66)||(46737041-46737073)
[»] chr6 (44 HSPs)
chr6 (9-199)||(22219712-22219902)
chr6 (9-204)||(11445346-11445541)
chr6 (9-198)||(12935154-12935343)
chr6 (9-196)||(31470314-31470501)
chr6 (9-196)||(20741460-20741650)
chr6 (9-197)||(23075487-23075675)
chr6 (34-192)||(10899942-10900100)
chr6 (9-192)||(18504922-18505105)
chr6 (9-198)||(2319669-2319857)
chr6 (9-195)||(18257496-18257682)
chr6 (32-196)||(11276589-11276753)
chr6 (34-197)||(20741098-20741260)
chr6 (15-194)||(15827639-15827819)
chr6 (34-197)||(18257135-18257297)
chr6 (34-200)||(10900315-10900480)
chr6 (9-195)||(4811616-4811801)
chr6 (34-204)||(11444978-11445147)
chr6 (34-195)||(11276967-11277127)
chr6 (34-199)||(28472633-28472796)
chr6 (34-199)||(29859822-29859985)
chr6 (34-196)||(15828026-15828187)
chr6 (34-199)||(31470701-31470865)
chr6 (34-197)||(12935542-12935704)
chr6 (35-194)||(18505305-18505463)
chr6 (34-195)||(1149816-1149977)
chr6 (34-192)||(2322604-2322760)
chr6 (107-197)||(1149463-1149553)
chr6 (98-196)||(23073998-23074096)
chr6 (34-195)||(4811372-4811532)
chr6 (82-193)||(29035069-29035180)
chr6 (69-193)||(29033436-29033560)
chr6 (69-192)||(3835145-3835268)
chr6 (78-200)||(18296140-18296262)
chr6 (32-102)||(35163570-35163639)
chr6 (9-65)||(1149558-1149614)
chr6 (16-82)||(32836114-32836179)
chr6 (34-102)||(31573817-31573885)
chr6 (34-196)||(5114467-5114628)
chr6 (34-127)||(25472398-25472491)
chr6 (34-71)||(28636582-28636619)
chr6 (34-127)||(29891466-29891558)
chr6 (34-71)||(31073528-31073565)
chr6 (35-102)||(25468943-25469010)
chr6 (9-53)||(28472997-28473041)
[»] chr2 (56 HSPs)
chr2 (9-199)||(43058692-43058881)
chr2 (9-196)||(18450829-18451016)
chr2 (9-200)||(7446705-7446896)
chr2 (9-197)||(22374684-22374872)
chr2 (9-193)||(40815347-40815531)
chr2 (9-196)||(28616973-28617160)
chr2 (9-194)||(239711-239896)
chr2 (9-197)||(11090879-11091067)
chr2 (11-192)||(40027501-40027682)
chr2 (34-202)||(26538463-26538631)
chr2 (9-197)||(1978468-1978656)
chr2 (9-200)||(14432500-14432691)
chr2 (9-200)||(3025822-3026011)
chr2 (16-192)||(8425358-8425533)
chr2 (34-197)||(11090519-11090681)
chr2 (34-200)||(18451216-18451381)
chr2 (34-198)||(239350-239512)
chr2 (34-197)||(22374318-22374480)
chr2 (34-200)||(40815730-40815895)
chr2 (34-201)||(40027134-40027300)
chr2 (34-195)||(43058333-43058493)
chr2 (34-197)||(1978106-1978268)
chr2 (38-196)||(7446341-7446497)
chr2 (34-196)||(26538096-26538257)
chr2 (69-201)||(28616607-28616739)
chr2 (77-197)||(28847122-28847242)
chr2 (34-192)||(8425745-8425902)
chr2 (69-196)||(20444748-20444875)
chr2 (34-192)||(14432145-14432302)
chr2 (34-198)||(3025463-3025625)
chr2 (80-200)||(20440461-20440581)
chr2 (80-194)||(35781093-35781207)
chr2 (69-195)||(35779708-35779834)
chr2 (69-193)||(8972239-8972363)
chr2 (82-193)||(15551501-15551612)
chr2 (78-193)||(15552482-15552596)
chr2 (34-158)||(28143416-28143538)
chr2 (36-96)||(31797166-31797225)
chr2 (34-127)||(44219712-44219804)
chr2 (34-127)||(14942230-14942324)
chr2 (34-159)||(62993-63117)
chr2 (34-200)||(20128123-20128288)
chr2 (34-96)||(33920710-33920772)
chr2 (34-96)||(5560936-5560998)
chr2 (34-96)||(13399520-13399582)
chr2 (34-76)||(15550793-15550834)
chr2 (35-101)||(43160397-43160463)
chr2 (34-71)||(4356142-4356179)
chr2 (34-71)||(4809002-4809039)
chr2 (34-127)||(6949519-6949612)
chr2 (34-127)||(11539705-11539798)
chr2 (34-71)||(11540024-11540061)
chr2 (34-127)||(16175735-16175828)
chr2 (34-71)||(42192628-42192665)
chr2 (34-201)||(43216095-43216261)
chr2 (34-101)||(43160103-43160170)
[»] chr8 (34 HSPs)
chr8 (9-196)||(13224998-13225185)
chr8 (9-204)||(19176281-19176476)
chr8 (9-192)||(9928912-9929095)
chr8 (9-196)||(11656816-11657003)
chr8 (9-195)||(41681493-41681679)
chr8 (9-192)||(12572210-12572393)
chr8 (9-196)||(44831246-44831433)
chr8 (9-199)||(33742918-33743107)
chr8 (9-194)||(31133579-31133764)
chr8 (9-193)||(33328499-33328683)
chr8 (36-200)||(34540934-34541098)
chr8 (35-197)||(41681132-41681292)
chr8 (40-197)||(4629795-4629952)
chr8 (34-199)||(19176675-19176839)
chr8 (34-196)||(9930042-9930203)
chr8 (34-199)||(12571859-12572024)
chr8 (34-201)||(11656449-11656616)
chr8 (34-197)||(31133218-31133380)
chr8 (34-192)||(33328161-33328318)
chr8 (34-198)||(44831630-44831793)
chr8 (34-191)||(13224645-13224800)
chr8 (34-201)||(9178021-9178186)
chr8 (9-103)||(9177724-9177818)
chr8 (87-197)||(11336959-11337069)
chr8 (34-148)||(33743304-33743417)
chr8 (69-202)||(10918119-10918252)
chr8 (34-192)||(4630177-4630328)
chr8 (83-196)||(8073985-8074097)
chr8 (69-116)||(43958264-43958311)
chr8 (34-206)||(35427198-35427369)
chr8 (34-90)||(18805267-18805322)
chr8 (35-127)||(18049658-18049750)
chr8 (34-96)||(28254812-28254874)
chr8 (34-127)||(28254493-28254586)
[»] chr3 (88 HSPs)
chr3 (9-200)||(37727289-37727480)
chr3 (16-196)||(39555577-39555757)
chr3 (9-196)||(31778652-31778839)
chr3 (9-201)||(43973799-43973991)
chr3 (9-199)||(29801775-29801965)
chr3 (9-198)||(5137340-5137529)
chr3 (9-197)||(4275723-4275911)
chr3 (9-198)||(17464488-17464677)
chr3 (9-201)||(22424808-22425000)
chr3 (9-196)||(20840920-20841107)
chr3 (9-196)||(27393660-27393847)
chr3 (9-195)||(25853234-25853420)
chr3 (25-196)||(30098138-30098309)
chr3 (9-192)||(32534962-32535145)
chr3 (9-200)||(23644823-23645015)
chr3 (17-197)||(26837358-26837538)
chr3 (9-192)||(26274570-26274753)
chr3 (9-174)||(24300577-24300742)
chr3 (11-167)||(41047060-41047215)
chr3 (34-195)||(39555962-39556122)
chr3 (34-197)||(31779037-31779199)
chr3 (34-198)||(20840557-20840720)
chr3 (34-193)||(25853612-25853770)
chr3 (34-196)||(37726928-37727089)
chr3 (34-197)||(5136978-5137140)
chr3 (39-198)||(48452986-48453144)
chr3 (34-200)||(24300941-24301106)
chr3 (34-192)||(41046703-41046860)
chr3 (34-200)||(32535344-32535513)
chr3 (34-196)||(23644461-23644622)
chr3 (34-196)||(27393962-27394123)
chr3 (34-200)||(30104477-30104641)
chr3 (34-195)||(43973441-43973601)
chr3 (34-200)||(26837741-26837905)
chr3 (45-191)||(22425209-22425354)
chr3 (78-195)||(29801356-29801473)
chr3 (69-195)||(23228427-23228552)
chr3 (81-194)||(51473429-51473542)
chr3 (34-196)||(17464876-17465038)
chr3 (69-192)||(25612396-25612519)
chr3 (34-161)||(26274952-26275077)
chr3 (69-200)||(51474753-51474884)
chr3 (69-195)||(50116828-50116954)
chr3 (78-194)||(32697128-32697244)
chr3 (81-177)||(18010176-18010272)
chr3 (69-193)||(25420560-25420684)
chr3 (78-197)||(37220555-37220674)
chr3 (84-197)||(45965936-45966049)
chr3 (34-90)||(55192222-55192277)
chr3 (15-101)||(8873784-8873869)
chr3 (34-107)||(27200078-27200150)
chr3 (120-197)||(37222041-37222118)
chr3 (19-107)||(2323466-2323553)
chr3 (34-102)||(37075781-37075848)
chr3 (16-90)||(50900637-50900710)
chr3 (34-159)||(55389641-55389765)
chr3 (9-107)||(37076034-37076133)
chr3 (81-131)||(23227320-23227370)
chr3 (34-127)||(50662798-50662890)
chr3 (98-206)||(25419133-25419242)
chr3 (34-71)||(32730775-32730812)
chr3 (34-107)||(36701482-36701554)
chr3 (34-127)||(51828343-51828436)
chr3 (34-102)||(8874072-8874138)
chr3 (34-102)||(40275187-40275255)
chr3 (34-90)||(49407900-49407955)
chr3 (34-197)||(49720369-49720531)
chr3 (34-196)||(51827956-51828117)
chr3 (34-101)||(43222775-43222842)
chr3 (34-101)||(47431790-47431857)
chr3 (34-96)||(14654577-14654639)
chr3 (34-192)||(22370599-22370757)
chr3 (34-96)||(37847206-37847267)
chr3 (34-96)||(40839038-40839100)
chr3 (34-96)||(43222488-43222550)
chr3 (34-127)||(44676858-44676950)
chr3 (34-96)||(50900914-50900975)
chr3 (34-76)||(52236935-52236976)
chr3 (34-159)||(52237203-52237327)
chr3 (34-79)||(36701224-36701268)
chr3 (34-71)||(40838775-40838812)
chr3 (34-127)||(46013808-46013901)
chr3 (34-71)||(52375450-52375487)
chr3 (34-71)||(52375717-52375754)
chr3 (81-137)||(32695761-32695817)
chr3 (34-102)||(34105034-34105102)
chr3 (34-101)||(49408169-49408233)
chr3 (34-90)||(55389983-55390039)
[»] chr1 (55 HSPs)
chr1 (9-199)||(21856038-21856228)
chr1 (9-196)||(39154379-39154566)
chr1 (9-197)||(15173453-15173640)
chr1 (9-197)||(50970276-50970464)
chr1 (8-202)||(15646185-15646379)
chr1 (9-193)||(17433574-17433758)
chr1 (9-200)||(29869978-29870169)
chr1 (9-187)||(33143925-33144103)
chr1 (9-194)||(5539817-5540002)
chr1 (9-194)||(8678542-8678727)
chr1 (9-196)||(18984478-18984665)
chr1 (9-194)||(4636330-4636515)
chr1 (34-195)||(29307326-29307487)
chr1 (11-194)||(5962579-5962762)
chr1 (25-201)||(26859053-26859229)
chr1 (34-205)||(9019347-9019518)
chr1 (34-197)||(18984117-18984279)
chr1 (9-195)||(17112282-17112467)
chr1 (34-196)||(50970663-50970824)
chr1 (34-195)||(29306953-29307113)
chr1 (34-193)||(33144304-33144462)
chr1 (34-196)||(5540203-5540364)
chr1 (34-196)||(15646580-15646741)
chr1 (34-195)||(8678927-8679086)
chr1 (34-196)||(29869619-29869780)
chr1 (34-197)||(26859445-26859606)
chr1 (34-192)||(15173099-15173256)
chr1 (45-204)||(9018964-9019122)
chr1 (34-192)||(5962963-5963120)
chr1 (34-195)||(21856428-21856588)
chr1 (34-195)||(17433216-17433376)
chr1 (34-193)||(39154021-39154179)
chr1 (69-196)||(52268289-52268416)
chr1 (109-204)||(2733416-2733511)
chr1 (95-205)||(47827033-47827141)
chr1 (79-193)||(52269177-52269291)
chr1 (34-200)||(44802557-44802722)
chr1 (34-131)||(4636037-4636132)
chr1 (120-193)||(47826966-47827039)
chr1 (34-96)||(17088526-17088587)
chr1 (45-107)||(45048533-45048594)
chr1 (34-102)||(17088243-17088310)
chr1 (34-96)||(45048253-45048314)
chr1 (34-127)||(9833538-9833630)
chr1 (34-127)||(9992223-9992315)
chr1 (34-102)||(8229732-8229800)
chr1 (34-102)||(17641750-17641818)
chr1 (34-96)||(39485163-39485224)
chr1 (34-96)||(44954612-44954674)
chr1 (34-71)||(8230027-8230064)
chr1 (34-127)||(16299068-16299160)
chr1 (34-71)||(34555766-34555803)
chr1 (38-107)||(44291701-44291769)
chr1 (34-71)||(44954349-44954386)
chr1 (36-96)||(29021252-29021311)
[»] chr5 (58 HSPs)
chr5 (9-197)||(5818927-5819115)
chr5 (9-201)||(8647797-8647989)
chr5 (9-197)||(19359495-19359683)
chr5 (9-199)||(24331555-24331747)
chr5 (9-201)||(8461290-8461482)
chr5 (11-193)||(14215243-14215425)
chr5 (9-195)||(164191-164376)
chr5 (199-333)||(38943753-38943887)
chr5 (9-193)||(2864756-2864940)
chr5 (9-197)||(18182968-18183156)
chr5 (9-202)||(29454733-29454926)
chr5 (9-193)||(15371873-15372060)
chr5 (9-196)||(25000448-25000635)
chr5 (9-197)||(16018946-16019134)
chr5 (34-196)||(29455127-29455288)
chr5 (34-195)||(8647438-8647598)
chr5 (16-204)||(15709335-15709522)
chr5 (34-200)||(18183354-18183519)
chr5 (34-197)||(2865140-2865302)
chr5 (34-195)||(5819314-5819474)
chr5 (34-197)||(24362221-24362383)
chr5 (38-195)||(19359136-19359292)
chr5 (9-189)||(24361843-24362022)
chr5 (34-200)||(15372258-15372423)
chr5 (34-199)||(15708967-15709130)
chr5 (9-189)||(24325218-24325397)
chr5 (34-197)||(8460928-8461090)
chr5 (34-198)||(14215628-14215791)
chr5 (34-200)||(164576-164741)
chr5 (34-197)||(14463906-14464067)
chr5 (78-194)||(4222150-4222266)
chr5 (69-195)||(7349436-7349562)
chr5 (33-113)||(14462686-14462770)
chr5 (34-173)||(25000112-25000250)
chr5 (78-195)||(4219663-4219780)
chr5 (67-194)||(6018315-6018441)
chr5 (12-107)||(10721873-10721967)
chr5 (69-195)||(7348559-7348685)
chr5 (78-195)||(4623148-4623265)
chr5 (78-196)||(16018588-16018705)
chr5 (34-160)||(24331945-24332073)
chr5 (16-107)||(27307148-27307238)
chr5 (69-161)||(6019189-6019282)
chr5 (9-107)||(28494931-28495029)
chr5 (34-127)||(32305886-32305977)
chr5 (34-101)||(41834445-41834511)
chr5 (34-96)||(28495227-28495288)
chr5 (69-161)||(4624644-4624736)
chr5 (34-90)||(27307444-27307499)
chr5 (27-102)||(16752948-16753022)
chr5 (34-127)||(28290030-28290122)
chr5 (78-113)||(13814155-13814190)
chr5 (34-96)||(16752680-16752741)
chr5 (34-71)||(15029695-15029732)
chr5 (34-127)||(19291424-19291517)
chr5 (34-71)||(28289807-28289844)
chr5 (35-127)||(8419008-8419098)
chr5 (34-90)||(14340793-14340849)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-198)||(2028-2215)
scaffold0951 (34-197)||(1665-1827)
[»] scaffold0417 (2 HSPs)
scaffold0417 (16-195)||(10989-11168)
scaffold0417 (34-176)||(10640-10781)
[»] scaffold1223 (2 HSPs)
scaffold1223 (34-195)||(1125-1286)
scaffold1223 (34-193)||(755-912)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-160)||(16855-17006)
scaffold0157 (34-127)||(16564-16656)
[»] scaffold0007 (4 HSPs)
scaffold0007 (9-192)||(64664-64847)
scaffold0007 (34-196)||(64301-64462)
scaffold0007 (34-193)||(205754-205911)
scaffold0007 (34-107)||(205038-205110)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-156)||(4242-4389)
scaffold0273 (34-197)||(4592-4754)
[»] scaffold0027 (2 HSPs)
scaffold0027 (34-192)||(42172-42330)
scaffold0027 (34-199)||(42544-42707)
[»] scaffold0295 (2 HSPs)
scaffold0295 (34-198)||(4790-4953)
scaffold0295 (15-193)||(5160-5334)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-192)||(9935-10116)
scaffold0432 (35-192)||(10259-10414)
[»] scaffold0019 (1 HSPs)
scaffold0019 (34-199)||(134058-134222)
[»] scaffold0176 (2 HSPs)
scaffold0176 (34-196)||(18834-18994)
scaffold0176 (98-201)||(19069-19172)
[»] scaffold1585 (1 HSPs)
scaffold1585 (70-194)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (81-196)||(28674-28789)
[»] scaffold0057 (2 HSPs)
scaffold0057 (69-192)||(61877-62000)
scaffold0057 (121-197)||(61026-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (92-192)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (79-173)||(471-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (69-146)||(7707-7784)
[»] scaffold0712 (2 HSPs)
scaffold0712 (34-76)||(6777-6818)
scaffold0712 (35-127)||(6460-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (34-76)||(6795-6836)
scaffold0709 (35-127)||(6478-6569)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 19590884 - 19591076
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590884 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 19590983  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||    
T  19590984 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcctaaaat 19591076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 32004800 - 32004606
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32004800 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataa 32004701  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattt 203  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||| ||||||||  ||||||||||||||||||| |||||    
T  32004700 ttgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctataattt 32004606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 38859000 - 38859192
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38859000 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 38859099  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    | |||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  38859100 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaat 38859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 2659025 - 2658828
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2659025 agcataggtgtaggtctaaaacggcctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 2658926  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaat 206  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||| || |||||    
T  2658925 ttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcctagaaattaat 2658828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 37787126 - 37787318
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37787126 agcataggggtaggtctaaaactgccaaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37787225  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||| ||| |||||||||| | |||||| |||||||||||||||||||||| ||||| ||||||||  |||||| ||||||||||||||||    
T  37787226 ttgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaaaat 37787318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 35289089 - 35288903
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  35289089 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataa 35288990  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||| ||  |||||||||||||||||    
T  35288989 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 34533977 - 34533789
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34533977 agcataggggtaggtctaaaactgcctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataa 34533878  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||| ||||||||| ||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  34533877 ttgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 19830779 - 19830965
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19830779 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataa 19830877  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||| ||| ||||||| |||| ||||||| |||||||||||| |||||||| ||||| ||||||||  ||||||||||||||||||    
T  19830878 ttgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 198
Target Start/End: Complemental strand, 23952914 - 23952727
Alignment:
Q  12 ataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattg 111  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  23952914 ataggggtaggtttaaaactgcctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattg 23952815  T
Q  112 aaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta-gaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||||| |||||||||||| |||||||||| ||||| ||||||||||| |  |||| ||||||||  ||||||||||||||||||||    
T  23952814 aaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcctaa 23952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 29100036 - 29099869
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||||| ||||||  |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29100036 agcatagaggtaggtctaaaacttcctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29099937  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 176  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  29099936 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgagga 29099869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 4641803 - 4641983
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4641803 agcatagaggtatgtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataa 4641902  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| ||||||| ||||||||||   |||||||| ||||| ||||||||  ||||||||||||||    
T  4641903 ttgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 19830580 - 19830418
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  19830580 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19830482  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||| ||||    
T  19830481 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 37786927 - 37786766
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  37786927 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 37786829  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||    
T  37786828 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 19590685 - 19590525
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |    
T  19590685 ctaaaactgtcatttctctgggtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19590587  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  19590586 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 35289286 - 35289448
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| | |||||||||||||| | |||  | ||||| || |||| ||||||||||||||| |||||||||||||||||||| |||||||||||| |    
T  35289286 ctaaaactattatttctctgcgtttttagagaat-aaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 35289384  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  35289385 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 29100236 - 29100393
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |    
T  29100236 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 29100334  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||  ||||||||||||||    
T  29100335 aaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 38858803 - 38858642
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |    
T  38858803 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 38858705  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||  |||||||| |||||||||    
T  38858704 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 34534176 - 34534338
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  34534176 ctaaaactgtcatttctctgtttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 34534274  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||| |||||||| ||||||||||||||| ||||| |||||| |  |||||| ||||||||||||    
T  34534275 aaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 32004999 - 32005159
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||| ||||||| ||||||||| || |    
T  32004999 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctatttt 32005097  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||| |||||||||||||||||  ||||| || |||||  |||||||||||||||||    
T  32005098 aaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 2659225 - 2659388
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| |||||||||||| |    
T  2659225 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2659323  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||||||| |||||||||| ||| ||| ||||| | ||||||  |||| |||||||||||||||    
T  2659324 aaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcctaa 2659388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 4478085 - 4478247
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | |||  ||| | || ||||||||||||||||||||||||||||||||||| || || ||||||| |    
T  4478085 ctaaaactgttatttctctgcgtttttggagaataaaatgagg-gataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgtttt 4478183  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||| ||||    
T  4478184 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 23953114 - 23953268
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  23953114 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23953212  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 189  Q
     ||||||| |||||||||||||||||||| |||| ||||||||  |||| ||||||    
T  23953213 gaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 4641600 - 4641443
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| |||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||      
T  4641600 ctaaaactatcatttctctgcatttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttc 4641502  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||  ||||||||||||||    
T  4641501 aaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 38161067 - 38160947
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatt 178  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||  | |||||||||||| ||||| | ||||||      
T  38161067 gtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggacc 38160968  T
Q  179 aaaagtgtaattaagcctaaa 199  Q
    |||||||||||||||||||||    
T  38160967 aaaagtgtaattaagcctaaa 38160947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 28584341 - 28584466
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| || ||||| |||||||| ||| |||||     
T  28584341 aaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaag 28584440  T
Q  169 cacgaggattaaaagtgtaattaagc 194  Q
    ||||||||  ||||||||||||||||    
T  28584441 cacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 28583565 - 28583437
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||  |||| || |||| ||||||||||| |||| | || ||||||| |||||     
T  28583565 aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaa 28583466  T
Q  169 cacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||  |||||||||||||||||||    
T  28583465 cacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4477887 - 4477800
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||| ||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  4477887 agcataggggtaggtctaaaactaccaaaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaa 4477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 9181692 - 9181600
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| |||||||||    
T  9181692 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaat-atagtttaaggacgattttgttc 9181600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 35579058 - 35578986
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| ||| ||||||    
T  35579058 ctaaaaatgtcatttctctgcgtttctggag-ttgaaaataggatgtaggattaaaactgcaaaaaacatgata 35578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 9393894 - 9393823
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||  |||| ||| ||||||    
T  9393894 taaaactgtcatttcactgtgtttctggag-ttgaaaataggaggtaggactaaaacagcaaaaaacatgata 9393823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 34595158 - 34595324
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||| ||||| || |||| ||||| ||| |||||| || | |||| ||||||||| | |     
T  34595158 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaataagggggtagcactaaaactgcaa-aaacatgatagtttagggacgattttgttc-gatt 34595254  T
Q  133 taaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||||  ||||||||| |||||||||| |  ||||    |||||  |||||||||||||||||| ||||    
T  34595255 taaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccttaaat 34595324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 7732648 - 7732483
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||| | ||||||| ||||| ||||||||| |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| | |     
T  7732648 ctaaaactgtcatttatgtgcgtttatggag-ttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc-gatt 7732552  T
Q  133 taaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||| || ||||||| |||||||||| || ||||   | ||||  |||| |||||||||||||||||    
T  7732551 taaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagcctaaaa 7732483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 32427406 - 32427461
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||| ||||| ||||    
T  32427406 ctaaaactgtcatttctctgcgtttttagag-ttgaaaataggaggaaggactaaaa 32427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 27245364 - 27245297
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    |||||||| |||||||| ||||||||||||||| ||||  ||||| |||||| |||| ||||| ||||    
T  27245364 ctaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaa 27245297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 48247977 - 48248148
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| | |||| |||| ||||| ||||   ||| || |||||| |||||||||  ||      
T  48247977 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 48248076  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaa 205  Q
    |||| |  ||||||| ||| |||||| |  ||||     ||||  |||||||||||||||||||||||||||    
T  48248077 aaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaatttaa 48248148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 26026478 - 26026437
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 26026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 25637584 - 25637676
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  25637584 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 25637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 26048108 - 26048071
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26048108 ctaaaactgtcatttctgtgcgtttctggagttggaaa 26048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 28687885 - 28687922
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28687885 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28687922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 35579272 - 35579344
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||| ||||| |||||||| | ||||| |||||||||||||| ||| |||| ||||| ||| ||||||    
T  35579272 ctaaaactgttatttccctgcgtttttagagtt-gaaaataggaggtatgactaaaactgcaaaaaacatgata 35579344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 24929689 - 24929757
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| |||||    
T  24929689 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaa 24929757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 33880971 - 33881038
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||| | ||||||||||||| ||||||||||| | || ||| |||| ||||| |||||    
T  33880971 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaataggggataagactaaaactgcaaaaaaaa 33881038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 5e-84; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 22434365 - 22434168
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22434365 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 22434266  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaat 206  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||||||||||| ||||||||||    
T  22434265 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccaaaaatttaat 22434168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 45082783 - 45082969
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45082783 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 45082882  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  45082883 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 46193591 - 46193405
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193591 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 46193492  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||||||||||    
T  46193491 ttgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 15523421 - 15523233
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15523421 agcataggggtaggtctaaaaccgcataaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataa 15523322  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  15523321 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 20470870 - 20471059
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20470870 agcataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20470969  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||| |||| |||||||||||| |||||||| | |||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||    
T  20470970 ttgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 20471059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 25447433 - 25447247
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447433 agcatatgggtaggtctaaaactgcctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 25447334  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||  |||||||||||||||||    
T  25447333 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 23494802 - 23494991
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||| || ||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23494802 agcataggggtaggtctaaaaccgcctaaaattgccatttctttacgtttctggagtttgagaataggatgtaggacgaaaaatgcaacaaaaatgataa 23494901  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  23494902 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 4219918 - 4220110
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  4219918 agcataggggtgggtctaaaaccgcctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4220017  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||| ||||||||||||||||| |||||| |||||| ||||||||||||||| ||||| ||||||||  |||||||||||||| ||||||||    
T  4220018 ttgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaaaat 4220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 51021155 - 51021342
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51021155 agcataggggtaggtctaaaaccgcctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 51021253  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    || ||||||| ||||||| |||| |||||||||||||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  51021254 ttaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 12234688 - 12234874
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12234688 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12234787  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||||||| || ||||||||||||||| ||||| ||||||||  |||||| ||||||||||    
T  12234788 ttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 48526545 - 48526723
Alignment:
Q  14 aggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 113  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48526545 aggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaa 48526644  T
Q  114 ggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||  |||||| |||||||    
T  48526645 ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 54995255 - 54995067
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995255 agcataagggtaggtctaaaaccgcctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 54995156  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||||||||| ||||  ||||||||  |||||||||||||| ||||    
T  54995155 ttgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 11153332 - 11153145
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11153332 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11153233  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||| |||| || |||||||||| ||||| ||| |||||||| ||||| ||||||||  |||||| |||||||||||    
T  11153232 ttgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 2118480 - 2118295
Alignment:
Q  9 agcataggg-gtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||| |||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2118480 agcatagggagtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 2118381  T
Q  108 attgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||||| |||||||| |||| |||||||||||||||| |||||||||||| ||||| ||| ||||  |||||||||||||||    
T  2118380 attgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 25938030 - 25938230
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||||| ||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25938030 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 25938129  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaatgg 208  Q
    |||||||||  |||||||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||  ||||||||||||||||||  | ||||||||    
T  25938130 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcctttattttaatgg 25938229  T
Q  209 t 209  Q
    |    
T  25938230 t 25938230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 18751785 - 18751602
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  18751785 agcataggggtaagtctaaaaccgcctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatat 18751686  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| |||||||||| |||||||||  ||||||| ||||| ||||||||  ||||||||||||||    
T  18751685 ttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 12503622 - 12503471
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503622 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12503523  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta 160  Q
    ||||||||| ||||||||||||| ||||| ||| ||| ||||||||||||||    
T  12503522 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagta 12503471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 15523619 - 15523780
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |    
T  15523619 ctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgtttt 15523717  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||  ||||||||||||||||||    
T  15523718 aaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 25447621 - 25447783
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  25447621 ctaaaactgtaatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 25447719  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||  |||||||||||||||||||    
T  25447720 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 25937830 - 25937664
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  25937830 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25937732  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||||||||||||||||||||| | ||| ||||||||  |||| ||||||||||||||||||    
T  25937731 aaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaaaat 25937664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 33109844 - 33109686
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  33109844 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 33109746  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||  |||| ||||||||||    
T  33109745 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 38962204 - 38962362
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  38962204 ctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 38962302  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||  |||| ||||||||||    
T  38962303 aaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 11153532 - 11153697
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |    
T  11153532 ctaaaactgttatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgtttt 11153630  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||| ||||    
T  11153631 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 11153697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 12234488 - 12234326
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgta 134  Q
    ||||||||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  12234488 taaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 12234390  T
Q  135 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||||||||||||||||||||| ||  ||||| || |||||  ||||||||||||||||||||    
T  12234389 aaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcctaa 12234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 46193790 - 46193948
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||| |||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |    
T  46193790 ctaaaactgtcaattctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgtttt 46193888  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||||||||    
T  46193889 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 199
Target Start/End: Original strand, 22434563 - 22434725
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  22434563 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt-t 22434659  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||  |||| ||||||||| ||||||    
T  22434660 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaacctaaa 22434725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||| || |||||     
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  169 cacgaggattaaaagtgtaattaagccta 197  Q
    || |||||  |||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 23494603 - 23494445
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||| | |||||  | ||||| || ||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |    
T  23494603 ctaaaactgtcatttctctgcgtgtttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgtttt 23494505  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||  |||| ||||||||||    
T  23494504 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 4219716 - 4219559
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgta 134  Q
    |||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | || ||    
T  4219716 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttatttta 4219618  T
Q  135 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||| ||||||||||||||||||||||| ||||| ||||||||  |||| ||||||||||    
T  4219617 aaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 51020957 - 51020792
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |    
T  51020957 ctaaaactgtcatttctctacgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttt 51020859  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||||||||||||||||||| |||| |   ||||| || |||||| ||||||||||||||||||||||    
T  51020858 aaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcctaaaa 51020792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 48526355 - 48526195
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  48526355 ctaaaactgtcatttctctgcatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 48526258  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||  |||||||| |||||||  |||| |||||| |  ||||||||||||||||||    
T  48526257 aaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 22170322 - 22170482
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |    
T  22170322 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgtttt 22170420  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||| ||||||| || |||||| |||||  |||| ||||||||  ||||||||||||||||||    
T  22170421 aaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 18763951 - 18764068
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 180  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||||||||||||||||| ||||| ||||||||  ||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  181 aagtgtaattaagcctaa 198  Q
    ||||||||||||| ||||    
T  18764051 aagtgtaattaagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 20958288 - 20958408
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    |||||||| |||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||| |||||||||||| |||||  |||||||     
T  20958288 ggtaggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggac 20958386  T
Q  178 taaaagtgtaattaagcctaaa 199  Q
    ||||||||||||||||| ||||    
T  20958387 taaaagtgtaattaagcgtaaa 20958408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 45082590 - 45082429
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||| ||||||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  45082590 ctaaaattgtcatttctctgtgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 45082493  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||  ||||| ||||||||||||||||| ||||| ||  ||||| |||||||| |||||    
T  45082492 aaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaacctaa 45082429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 48713777 - 48713893
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 180  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||| |||| ||||||| | ||| |||||| |||||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaa 48713876  T
Q  181 aagtgtaattaagccta 197  Q
    |||||||||||| ||||    
T  48713877 aagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 54995453 - 54995614
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| |||||||| ||||||| | |||  | ||||| || | |||||||||||||||||||||| ||||| |||||||||| ||||||||| || |    
T  54995453 ctaaaactatcatttctttgcgtttttagagaat-aaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctatttt 54995550  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||| || ||||||||||||||| ||||| ||||||||  |||||||||||||| ||||    
T  54995551 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 2118681 - 2118837
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| | |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |    
T  2118681 ctaaaactattatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttt 2118778  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||  |||||||||||| |||| || ||||| ||||| ||  ||||||||||||||    
T  2118779 aaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt-aaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 176  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||| | || | ||||| |||| ||||||||||||||||| ||||| ||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  177 ttaaaagtgtaattaagcc 195  Q
    | |||||||||||||||||    
T  35363128 tcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 43243708 - 43243806
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 176  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||| |||||||||||| ||||| ||||||||    
T  43243708 ggtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgagga 43243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 16691062 - 16690939
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||| |||| ||||  |||||||||| ||||||||||||| ||||     
T  16691062 aaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaa 16690963  T
Q  169 cacgaggattaaaagtgtaattaa 192  Q
    ||| ||||  |||| |||||||||    
T  16690962 cacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 10258304 - 10258433
Alignment:
Q  67 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaa 166  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||  || |||||  |||||| |||||||||||||||| |||| ||||||| |||     
T  10258304 tgaaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccac 10258403  T
Q  167 atcacgaggattaaaagtgtaattaagcct 196  Q
    | ||||||||  ||||||||||||||||||    
T  10258404 aacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 16691491 - 16691616
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| ||||||| ||||||||||||||||||||| |||||| |||||| |||||||| |||| ||||  |||||||||| ||||||||||||  ||||     
T  16691491 aaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtt-taaagaggcaggaccattttcgtgagtaggtcaaaa 16691589  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    |||  |||| |||||||||||||||||    
T  16691590 cacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 48293708 - 48293592
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 180  Q
    |||| ||||||||||||||||||||||||||||| || |||||||| |||| ||||  | ||||| || |||||||||||  ||||| ||||||||  ||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaa 48293609  T
Q  181 aagtgtaattaagccta 197  Q
    |||||||||||||||||    
T  48293608 aagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 43281210 - 43281316
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||||||||||||||||||||||||| |||||||||| ||  |||||||||||| ||||| |||| ||||| |||||||||||| |||||     
T  43281210 aaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaa 43281308  T
Q  169 cacgagga 176  Q
    ||||||||    
T  43281309 cacgagga 43281316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 48294961 - 48295088
Alignment:
Q  69 aaaataggaggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 167  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||| ||||  |||| ||||| ||||||||||||| ||||    
T  48294961 aaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaa 48295060  T
Q  168 tcacgaggattaaaagtgtaattaagcc 195  Q
     ||||| ||  |||| ||||||||||||    
T  48295061 acacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 12503821 - 12503913
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  12503821 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 44892576 - 44892692
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    |||||||||||||||||||||||||  ||||||||| |||  |||||||||||| ||||| ||||| |||| ||||||||||||  |||| ||||||||     
T  44892576 ggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggac 44892675  T
Q  178 taaaagtgtaattaagc 194  Q
     |||| | |||||||||    
T  44892676 caaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 48708401 - 48708293
Alignment:
Q  89 aaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaa 188  Q
    |||||||||||||||||||||||||||||  ||||||| |||| ||||||||||||| || |||||||  ||| ||||| |||  |||  ||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaa 48708302  T
Q  189 ttaagccta 197  Q
    |||||||||    
T  48708301 ttaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 43242396 - 43242328
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 137  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||    
T  43242396 aaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 17504133 - 17504061
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  17504133 ctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 20957301 - 20957224
Alignment:
Q  83 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta 160  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||| |||||| | | ||||| |||||||||||    
T  20957301 gacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagta 20957224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  125 ttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||| ||||||||  ||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 44890643 - 44890518
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||| || |||||||||||||||||  |||||| |||||   |||||||||||| |||||||||| ||||| |||||||| |||  ||||     
T  44890643 aaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaa 44890544  T
Q  169 cacgaggattaaaagtgtaattaagc 194  Q
    ||| ||||  |||| |||||||||||    
T  44890543 cacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 17504345 - 17504407
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||| || |||| |||||    
T  17504345 ctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaa 17504407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 35193467 - 35193406
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||||| |||| |||||    
T  35193467 ctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggagataggactaaaactgcaa 35193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 44220805 - 44220858
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 131  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||||||||||||    
T  44220805 ggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtt 44220858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 55189636 - 55189528
Alignment:
Q  87 aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgt 186  Q
    ||||||| | ||||||||||||||||| ||| |||||||||| || ||||||||||  |||| |||  ||| |||  |||| ||||||||| |||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  187 aattaagcc 195  Q
    |||||||||    
T  55189536 aattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 40160468 - 40160549
Alignment:
Q  25 taaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||| |||||||||||   ||||||| ||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  40160468 taaaactgcctaaaactgcattttctctacgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 40160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 10795692 - 10795730
Alignment:
Q  15 ggggtaggtttaaaaccgcctaaaactgtcatttctctg 53  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  10795692 ggggtaggtctaaaactgcctaaaactgtcatttctctg 10795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 12593184 - 12593143
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 12593143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 14439988 - 14439926
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  14439988 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 14439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 18965300 - 18965208
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||| | ||||||||| ||| |||||||| ||||||||| || |||| ||||| ||| |||||| || |||||| |||||||||    
T  18965300 ctaaaactgtcatttatatgcgtttctagag-ttgaaaataaggaggtagaactaaaactgcaa-aaacatgatagtttaaggacgattttgttc 18965208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 46736815 - 46736774
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  46736815 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 46736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 229545 - 229636
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaat-aggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgtt 126  Q
    |||||| ||||| |||| ||||||||||||| |||||||| |||||||||||  |||| ||||| ||| |||||| || |||||| ||||||||    
T  229545 ctaaaattgtcacttctgtgcgtttctggag-ttgaaaataaggaggtaggattaaaactgcaa-aaacatgatagtttaaggacgattttgtt 229636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 26974444 - 26974407
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  26974444 ctaaaactgtcatttctgtgcgtttctggagttggaaa 26974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 34789542 - 34789450
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||| |||||||| | ||||||||||||||||||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  34789542 ctaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 34789450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 45838933 - 45838970
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  45838933 ctaaaactgtcatttctgtgcgtttctggagttggaaa 45838970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 46737041 - 46737073
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtt 66  Q
    ||||||||||||||||| |||||||||||||||    
T  46737041 ctaaaactgtcatttctgtgcgtttctggagtt 46737073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 22219712 - 22219902
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22219712 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 22219811  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  22219812 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaa 22219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 11445346 - 11445541
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11445346 agcataggggtgggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11445445  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||| ||||    
T  11445446 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaatttta 11445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 12935343 - 12935154
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935343 agcataggggtatatctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12935244  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  12935243 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 31470501 - 31470314
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31470501 agcataggggtaggtctaaaatcgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 31470402  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||| |||  |||||||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  31470401 ttgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 20741460 - 20741650
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgc---aacaaaaatga 105  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||    
T  20741460 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatga 20741559  T
Q  106 taattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  20741560 taattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 23075487 - 23075675
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23075487 agcataagggtaggtctaaaactgcctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 23075586  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  23075587 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 10900100 - 10899942
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  10900100 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 10900001  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||  ||||||||||||||    
T  10900000 aaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 18505105 - 18504922
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18505105 agcataggggtaggtctaaaatcgcctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataa 18505006  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  18505005 ttgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 2319857 - 2319669
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||    
T  2319857 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataa 2319759  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  |||| |||||||||||||||    
T  2319758 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaa 2319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 18257496 - 18257682
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  18257496 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataa 18257595  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||  |||||| ||||||||||    
T  18257596 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 11276753 - 11276589
Alignment:
Q  32 gcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11276753 gcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgtt 11276654  T
Q  132 gtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
     |||||||| |||| ||||||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  11276653 ttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 20741260 - 20741098
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  20741260 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgtttt 20741162  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  20741161 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 15827819 - 15827639
Alignment:
Q  15 ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaag 114  Q
    |||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15827819 ggggtaagtctaaaaccgcctaaaa-tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaag 15827721  T
Q  115 gacc--attttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    ||||  | |||||| |||| ||||||| ||| ||||||||||||||||  ||||| ||||||||  ||||||||||||||||    
T  15827720 gaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 18257297 - 18257135
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  18257297 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18257199  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||||    
T  18257198 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 10900315 - 10900480
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  10900315 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 10900413  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||||||||| |||||||||||||||||| |||||  |||||||  ||||||||||||||||| ||||    
T  10900414 aaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccaaaaa 10900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 4811616 - 4811801
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||  ||||||| || ||||| ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||    
T  4811616 agcataggggtaggtctaaaactacctaaaattgccattt-tctgcgtttatggggtttgaaaataggaggtatgatgaaaaatgcaacaaaaatgataa 4811714  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||  ||| || ||||||| ||||||| ||||| ||||||||| |||||| ||||||||||    
T  4811715 ttgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 204
Target Start/End: Complemental strand, 11445147 - 11444978
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| | |||  | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  11445147 ctaaaactgtcatttctctgtgtttttagagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgtttt 11445049  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    ||| |||||||||||| ||||||||||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  11445048 aaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaattta 11444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 11276967 - 11277127
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |    
T  11276967 ctaaaactgtcatttctcttcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgtttt 11277065  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  11277066 aaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 28472796 - 28472633
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  28472796 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 28472699  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||| |||||||||| |||||||||| | ||||| ||||||||  |||||||||||||||||||||    
T  28472698 aaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaaa 28472633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 29859985 - 29859822
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  29859985 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 29859888  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||| |||||||||| |||||||||| | ||||| ||||||||  |||||||||||||||||||||    
T  29859887 aaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaaa 29859822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 15828026 - 15828187
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  15828026 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 15828124  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  15828125 aaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 34 - 199
Target Start/End: Original strand, 31470701 - 31470865
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  31470701 ctaaaattgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 31470799  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||| ||||||||||||||||| | ||| ||| ||||  |||||||||||||||| ||||    
T  31470800 aaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagcataaa 31470865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 12935542 - 12935704
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||| |    
T  12935542 ctaaaactgtcatttctctgtgtttatggagaat-aaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgtttt 12935640  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    | || ||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||||    
T  12935641 ataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 18505305 - 18505463
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgta 134  Q
    |||||||||||||||||| ||||  |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||    
T  18505305 taaaactgtcatttctcttcgttgttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgtttta 18505403  T
Q  135 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||    
T  18505404 aaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 1149816 - 1149977
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||     
T  1149816 ctaaaactgtcatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctattt 1149914  T
Q  133 taaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||| ||||||| | ||| ||||||||  |||||||||||||||||    
T  1149915 taaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 2322604 - 2322760
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  2322604 ctaaaactgtcatttctctgtgttt-tggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 2322701  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||| |||| ||| |||||||||||||||||||| ||||| ||  ||||||||||||||    
T  2322702 aaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  107 aattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 23074096 - 23073998
Alignment:
Q  98 aaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 4811532 - 4811372
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||| ||||||||| || ||  | ||||| || |||| ||||||||||| |||||||||||||||||||||||| |||| |||| || |    
T  4811532 ctaaaactgttatttatctgcgtttttgaagaat-aaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatttt 4811434  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||| ||||||||||||||||||||||||  ||  |||  |||||||||||||||||    
T  4811433 aaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 29035069 - 29035180
Alignment:
Q  82 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaa 181  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||  |||| |||||||||||| | ||| ||||||||  |||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaa 29035168  T
Q  182 agtgtaattaag 193  Q
    ||||||||||||    
T  29035169 agtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 29033560 - 29033436
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||| ||||  ||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||| ||||||||| || |||||     
T  29033560 aaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 29033461  T
Q  169 cacgaggattaaaagtgtaattaag 193  Q
     |||||||  |||||||||||||||    
T  29033460 tacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 3835145 - 3835268
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||  |||||||||| ||||||||||||  ||||     
T  3835145 aaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaa 3835244  T
Q  169 cacgaggattaaaagtgtaattaa 192  Q
    |||  |||  ||||||||||||||    
T  3835245 cacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 18296262 - 18296140
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||  | || ||| |||||||   |||| ||||||||     
T  18296262 ggtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggac 18296163  T
Q  178 taaaagtgtaattaagcctaaaa 200  Q
    ||||| | |||||||||||||||    
T  18296162 taaaattataattaagcctaaaa 18296140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 35163570 - 35163639
Alignment:
Q  32 gcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| ||||| |||||    
T  35163570 gcctaaaactgtcatttctctgtgtttttggag-ttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 1149614 - 1149558
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagt 65  Q
    ||||||||||||||| ||||| ||||||||||||  ||||||||| |||||||||||    
T  1149614 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgtgtttctggagt 1149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 32836179 - 32836114
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtag 82  Q
    |||||||| |||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  32836179 gggtaggtctaaaattgtctaaaactgtcatttctctgtgtttcaggag-ttgaaaataggaggtag 32836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 31573885 - 31573817
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  31573885 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 31573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 5114628 - 5114467
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||  ||      
T  5114628 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 5114530  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||| |  ||||||| |||||||||| || ||||     ||||| |||| |||||||||||||    
T  5114529 aaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagcct 5114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 25472398 - 25472491
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||| | ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  25472398 ctaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 25472491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 28636582 - 28636619
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28636582 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 29891466 - 29891558
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||||| |||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  29891466 ctaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 29891558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 31073528 - 31073565
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  31073528 ctaaaactgtcatttctgtgcgtttctggagttggaaa 31073565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 25469010 - 25468943
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaa 102  Q
    |||||||||||||||| |||||||||||| ||| |||||| |||| |||||| |||| ||||| |||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaattt-aaaatagggagataggactaaaactgcaagaaaaa 25468943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 28472997 - 28473041
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctg 53  Q
    |||||| |||||||| ||||||| |||||||||||||||| ||||    
T  28472997 agcatatgggtaggtctaaaaccccctaaaactgtcatttttctg 28473041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 43058692 - 43058881
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43058692 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 43058790  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  43058791 ttgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctaaa 43058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 18451016 - 18450829
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18451016 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataa 18450917  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  18450916 ttgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 7446705 - 7446896
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446705 agcatatgagtaggtctaaaaccgcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 7446804  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||   |||| ||||||||| |||| |||||||||||||||||    
T  7446805 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcctaaaa 7446896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 22374684 - 22374872
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22374684 agcataggggaaggtctaaaaccgcctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22374783  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| |||||||||| ||||| |||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  22374784 ttgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 40815531 - 40815347
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40815531 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 40815432  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||| ||| ||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  40815431 ttgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 28616973 - 28617160
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28616973 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 28617072  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  28617073 ttgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 239711 - 239896
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  239711 agcatagagttaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataa 239810  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||| |||||    
T  239811 ttgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 11090879 - 11091067
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  11090879 agcatatgggtaggtctaaaaccgcctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataa 11090978  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  11090979 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 40027501 - 40027682
Alignment:
Q  11 cataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    |||| |||||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027501 catatgggtaggtctaaaaccgcctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40027600  T
Q  111 gaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||| |||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  ||||||||||||||    
T  40027601 gaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 26538463 - 26538631
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  26538463 ctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26538562  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatt 202  Q
    || ||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||    
T  26538563 aagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaatt 26538631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 1978468 - 1978656
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||||| ||||||||| |||||||| ||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1978468 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 1978567  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||  |||||||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||  |||||||||||||||||||    
T  1978568 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 14432500 - 14432691
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  14432500 agcataagggtaggtctaaattcgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataa 14432599  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||| |||||||| ||||||| ||||| |||| |||||||||| ||||||| ||||| ||||||||  |||| |||||||||| ||||||    
T  14432600 ttgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaaggctaaaa 14432691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 3025822 - 3026011
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3025822 agcatatgggtaggtctaaacccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 3025921  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||| ||||||| |||| ||||||||||| |||| |||||||||||  ||||| ||||||||  |||| |||||||||||| ||||    
T  3025922 ttgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagccaaaaa 3026011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 8425533 - 8425358
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 115  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  8425533 gggtaggtctaaaaccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-g 8425435  T
Q  116 accattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||| |||||||||||| ||||| || | ||||| |||||||||||| ||||| ||| ||||  ||||||||||||||    
T  8425434 accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 11090681 - 11090519
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  11090681 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11090583  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||| ||||    
T  11090582 aaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 18451216 - 18451381
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  18451216 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgtttt 18451314  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||||    
T  18451315 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 18451381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 239512 - 239350
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  239512 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 239414  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||| ||||||||||||||||||||||| ||||| ||||| ||  ||||||||||||||||||||    
T  239413 aaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcctaa 239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 22374480 - 22374318
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| |||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  22374480 ctaaaactatcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374382  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  22374381 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 40815730 - 40815895
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||||| |    
T  40815730 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgtttt 40815828  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||||    
T  40815829 aaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaaaa 40815895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 40027300 - 40027134
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  40027300 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 40027202  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||  |||||||||||||||||| ||||    
T  40027201 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccttaaat 40027134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 43058493 - 43058333
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  43058493 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 43058395  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||| |||||||||||||| |||||| | ||||| ||||||||| |||||||||||||||||    
T  43058394 aaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 1978268 - 1978106
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  1978268 ctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 1978170  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||  |||| ||||||||||||||    
T  1978169 aaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 7446497 - 7446341
Alignment:
Q  38 aactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 137  Q
    ||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||| |||||||||||||||| |||| |||||||||||| |||||    
T  7446497 aactgtcatttctctgcgtttttggagaat-aaaatggg-ggtatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaa 7446400  T
Q  138 gggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  7446399 gggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 26538257 - 26538096
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| ||||||||| |||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  26538257 ctaaaactgttatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgtttt 26538159  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||  ||||||||||||||||||    
T  26538158 aaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 28616739 - 28616607
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||     
T  28616739 aaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 28616640  T
Q  169 cacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||||||  ||||||||||||||||| |||||    
T  28616639 cacgaggaccaaaagtgtaattaagccaaaaat 28616607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 28847122 - 28847242
Alignment:
Q  77 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 176  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  28847122 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  177 ttaaaagtgtaattaagccta 197  Q
      |||| ||||||||||||||    
T  28847222 ccaaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 8425745 - 8425902
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||  ||||||||| || |    
T  8425745 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctatttt 8425843  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||||||||| |||||||||||||||||| ||| || |  ||||||||||||||    
T  8425844 aaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 20444875 - 20444748
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| | |||||     
T  20444875 aaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaa 20444776  T
Q  169 cacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||  ||||||||||||||||||    
T  20444775 cacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 14432302 - 14432145
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||| |||||||||| ||||||| | || |    
T  14432302 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatatttt 14432204  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||| |||||||||| ||||||| ||||| ||||||||  ||||||||||||||    
T  14432203 aaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 3025625 - 3025463
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| | |||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |    
T  3025625 ctaaaactgtcatttctttgcgttttttgagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 3025528  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||  |||| |||||| || |||||    
T  3025527 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaa 3025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 20440461 - 20440581
Alignment:
Q  80 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatta 179  Q
    ||||||||||| ||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||  |    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T
Q  180 aaagtgtaattaagcctaaaa 200  Q
    |||||||||||||||||||||    
T  20440561 aaagtgtaattaagcctaaaa 20440581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 35781093 - 35781207
Alignment:
Q  80 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatta 179  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||| ||||| |||||||||||| ||||| ||||||||| |    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatca 35781192  T
Q  180 aaagtgtaattaagc 194  Q
    |||||||||||||||    
T  35781193 aaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 35779834 - 35779708
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||   ||||     
T  35779834 aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaa 35779735  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||  |||||||||||||||||    
T  35779734 cacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 8972363 - 8972239
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||| ||||| ||||||||| |  |||||     
T  8972363 aaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaa 8972264  T
Q  169 cacgaggattaaaagtgtaattaag 193  Q
    ||||||||  |||||||||||||||    
T  8972263 cacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 15551612 - 15551501
Alignment:
Q  82 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaa 181  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| |||| ||||| |||| ||||| ||||||||||| |||||| ||||||||  |||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaa 15551513  T
Q  182 agtgtaattaag 193  Q
    ||||||||||||    
T  15551512 agtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 15552482 - 15552596
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| || |||||||||||| ||||| ||  | ||     
T  15552482 ggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgac 15552580  T
Q  178 taaaagtgtaattaag 193  Q
     |||||||||||||||    
T  15552581 caaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 28143416 - 28143538
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | |||| |||||||||  ||      
T  28143416 ctaaaactgtcatttctctgcgtttctggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttcgatttg 28143513  T
Q  134 aaaagggcaggaccagtttcgtgag 158  Q
    |||  |||||||||| |||||||||    
T  28143514 aaagaggcaggaccattttcgtgag 28143538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 31797166 - 31797225
Alignment:
Q  36 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||    
T  31797166 aaaactgtcatttctctgcgtttctagag-ttgaaaataggaggtaggactaaaactgcaa 31797225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 44219804 - 44219712
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttc 44219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 14942230 - 14942324
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--atgataattgaaggaccattttgttc 127  Q
    |||||||||  |||||||||| ||||||||| |||||||||||| ||||||| |||| ||||| ||||  ||||||||| | |||| |||||||||    
T  14942230 ctaaaactgcgatttctctgcatttctggag-ttgaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttc 14942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 63117 - 62993
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||| | ||||||||| ||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||  || |    
T  63117 ctaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttt 63019  T
Q  134 aaaagggcaggaccagtttcgtgagt 159  Q
    |||| || ||||||| ||||||||||    
T  63018 aaaaaggtaggaccattttcgtgagt 62993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 20128123 - 20128288
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||| || | |    
T  20128123 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgtt-tgattt 20128220  T
Q  134 aaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||||| || ||||||| |||||||||| |   |||   | ||||  ||||||||||||||||||||||    
T  20128221 aaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcctaaaa 20128288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 33920772 - 33920710
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||| |||||    
T  33920772 ctaaaactgtcatttctatgcgtttctggag-ttgaaaatagggagataggactaaaactgcaa 33920710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 5560936 - 5560998
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  5560936 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 5560998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 13399582 - 13399520
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  13399582 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 13399520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 15550834 - 15550793
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 15550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 43160397 - 43160463
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    |||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa 43160463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 4356142 - 4356179
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4356142 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 4809039 - 4809002
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4809039 ctaaaactgtcatttctgtgcgtttctggagttggaaa 4809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 6949612 - 6949519
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  6949612 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttc 6949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 11539798 - 11539705
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  11539798 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 11539705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 11540024 - 11540061
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  11540024 ctaaaactgtcatttctgtgcgtttctggagttggaaa 11540061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 16175735 - 16175828
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  16175735 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 16175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 42192628 - 42192665
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  42192628 ctaaaactgtcatttctgtgcgtttctggagttggaaa 42192665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 43216095 - 43216261
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatag-gaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    |||||| |||||||||| ||| ||||||||||| |||| ||| ||| |||||| |||| ||||| ||| || ||| || | |||| |||||||||  ||     
T  43216095 ctaaaattgtcatttctgtgcatttctggagttggaaa-tagagagataggactaaaactgcaaaaaatat-atagtttagggacgattttgttcgatt- 43216191  T
Q  133 taaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||| || ||||||| |||||||||| |  |||| | | |||| ||||||||||||||||||| ||||    
T  43216192 taaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcctgaaat 43216261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 43160170 - 43160103
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||||    
T  43160170 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaactgcaaaaaaa 43160103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 13224998 - 13225185
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13224998 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 13225097  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  13225098 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 19176476 - 19176281
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19176476 agcatatgggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataa 19176377  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||||||| |||||    
T  19176376 ttgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatattta 19176281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 9929095 - 9928912
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9929095 agcataagggtaggtctaaaaccgcctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataa 9928996  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  9928995 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 11656816 - 11657003
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| || || ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656816 agcataggggtaggtctacaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11656915  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  11656916 ttgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 41681493 - 41681679
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41681493 agcataggggtaggtctaaaaccgcctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 41681592  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||| ||| ||||| ||||||||  |||||||||||||||||    
T  41681593 ttgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 12572210 - 12572393
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12572210 agcataggggtagatctaaaaccgcctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12572309  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| |||||| ||| ||| |||||||||||||||||||| ||||||||  ||||||||||||||    
T  12572310 ttgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 44831433 - 44831246
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44831433 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 44831334  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    | |||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| || |||||  ||||||||||||||||||    
T  44831333 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 33743107 - 33742918
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  33743107 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataa 33743008  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    ||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||  |||| ||||||||  |||||||||||||||||||||    
T  33743007 ttgaaagacc-gtttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaaa 33742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 31133579 - 31133764
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| | ||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31133579 agcatagagataggtctaaaaccgcataaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataa 31133678  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  31133679 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 33328499 - 33328683
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33328499 agcataggggtaggtttaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataa 33328598  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||||| ||||||| |||| |||||| ||| ||| |||||||||||||| | ||| ||||||||  |||||| ||||||||    
T  33328599 ttgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 34540934 - 34541098
Alignment:
Q  36 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaa 135  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  136 aagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||| |||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 34541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 41681292 - 41681132
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgta 134  Q
    |||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  41681292 taaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 41681195  T
Q  135 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  41681194 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 4629952 - 4629795
Alignment:
Q  40 ctgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagg 139  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||| || |||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  140 gcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||| ||  ||||| |||||| |||||||||| |||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 199
Target Start/End: Original strand, 19176675 - 19176839
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  19176675 ctaaaactgtcatttgtctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176773  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  19176774 aaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaa 19176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 9930042 - 9930203
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| ||||||||||||| || |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  9930042 ctaaaactatcatttctctgcgcttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctatttt 9930140  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||||||||||||| |||||  |||||||  ||||||||||||||||||    
T  9930141 aaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 12572024 - 12571859
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||||||||||||| |||||  | ||||| || || |||||||||||||||||||||||||||||||||| |||| ||||||||||||     
T  12572024 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt 12571926  T
Q  133 taaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||| || ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  12571925 taaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaa 12571859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 11656616 - 11656449
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||| ||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||     
T  11656616 ctaaaactgccatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagttt 11656518  T
Q  133 taaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  11656517 taaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaat 11656449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 31133380 - 31133218
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||  ||||||| |||| |    
T  31133380 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgtttt 31133282  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||| |||||||||||||||||||  |||| ||||||||  |||||||||||||||||||    
T  31133281 aaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 33328318 - 33328161
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |    
T  33328318 ctaaaactgtcatttctttgcgtttttggagaat-aaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 33328220  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||| || ||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  33328219 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 44831630 - 44831793
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||  ||| |||||||||||| |    
T  44831630 ctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgtttt 44831728  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||  |||||||| |||||||||||    
T  44831729 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctaa 44831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 13224800 - 13224645
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||||||   |||||||||||| |    
T  13224800 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgtttt 13224702  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatta 191  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||  |||||||||||||    
T  13224701 aaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 9178021 - 9178186
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||| |||||||||||||||||| | |||  | ||||| || |||| || |||||||||||||||||||||| |||||||||| |||||||||||| |    
T  9178021 ctaaaattgtcatttctctgcgttttttgagaat-aaaatggg-ggtaagatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 9178118  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    || |||||| || ||||||||||||||| ||||| ||||||||  ||||||||||||||||| |||||    
T  9178119 aagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaat 9178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 9177818 - 9177724
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat 103  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9177818 agcataggggtaggtctaaaaccgcctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  87 aaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgt 186  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||| |||||| |||||||||||  ||||| ||||| ||  ||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  187 aattaagccta 197  Q
    |||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 33743304 - 33743417
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |    
T  33743304 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgtttt 33743402  T
Q  134 aaaagggcaggacca 148  Q
    |||| ||||| ||||    
T  33743403 aaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 10918252 - 10918119
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||| || |||||||||||||||||||||| ||||||||| |||||| |||||| |||   |||| ||||| ||||||||||||| ||||     
T  10918252 aaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaa 10918153  T
Q  169 cacgaggattaaaagtgtaattaagcctaaaatt 202  Q
    ||||||||  |||| ||||||||| |||||||||    
T  10918152 cacgaggacaaaaaatgtaattaaacctaaaatt 10918119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 4630177 - 4630328
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||||||      ||||||||||||| || | ||||||| |    
T  4630177 ctaaaactgtcatttttctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaa------taattgaaggaccgttgtattctgtttt 4630269  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||  ||||||||| |||||||||||| ||||| ||||| ||| ||||||||||||||    
T  4630270 aaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 8073985 - 8074097
Alignment:
Q  83 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaa 182  Q
    |||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||| || || || |||||||| ||| ||||| ||||||||  ||||    
T  8073985 gacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaa 8074083  T
Q  183 gtgtaattaagcct 196  Q
    || ||| |||||||    
T  8074084 gtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 43958311 - 43958264
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 116  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  43958311 aaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 206
Target Start/End: Original strand, 35427198 - 35427369
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| ||||||| ||||   |||| | |||| |||| ||||| ||| || |||||| | |||| ||||||||| ||| |    
T  35427198 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatat-ataatttagggacgattttgttcggtt-t 35427295  T
Q  134 aaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaat 206  Q
    ||||| || || |||| |||||||||| |  ||||   ||||||  |||||||||||||||||||| |||||||    
T  35427296 aaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaatatttaat 35427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 18805322 - 18805267
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||||||| ||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggag-ttgaagataggaggtaggactaaaa 18805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 18049750 - 18049658
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 18049658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 28254812 - 28254874
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  28254812 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 28254874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 28254586 - 28254493
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||| |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  28254586 ctaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 28254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 37727289 - 37727480
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727289 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37727388  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||| || |||||  ||||||||||||||||| ||||    
T  37727389 ttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccaaaaa 37727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 39555757 - 39555577
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39555757 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaagg 39555658  T
Q  116 accattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  39555657 accattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 31778839 - 31778652
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31778839 agcatacgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 31778740  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
      |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||||||||    
T  31778739 acgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 43973799 - 43973991
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  43973799 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 43973898  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  43973899 ttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaat 43973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 29801775 - 29801965
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29801775 agcatagaggtaggtctaaaaccgtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 29801874  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  29801875 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaaa 29801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 5137340 - 5137529
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  5137340 agcatgggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataa 5137439  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||||||||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||  ||||||||||||||||||||    
T  5137440 ttgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 5137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 4275723 - 4275911
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275723 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4275822  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    || ||||||| |||||||||||| |||||| ||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  4275823 ttaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 17464677 - 17464488
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17464677 agcataggggtaggtctaacaccgcctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17464578  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| || ||| ||||| ||||||||  ||||||||||||||||||||    
T  17464577 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcctaa 17464488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 22425000 - 22424808
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22425000 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22424901  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||||||| ||||| |  || |||||| |  |||||||||||||||||||||||    
T  22424900 ttgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaaaat 22424808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 20840920 - 20841107
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||  | |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840920 agcataggggtatatctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20841019  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |  ||||||||||||||||||    
T  20841020 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 27393847 - 27393660
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  27393847 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataa 27393748  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||||||||||| ||||| |||||||||||||| ||||||||  |||| ||||||||  ||||||||||||||||||    
T  27393747 ttgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 25853420 - 25853234
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25853420 agcatagggataggtctaaaaccgcctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 25853321  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||| ||||||||| || |||||||||| ||||| |||||||||||| ||||| ||||||||  |||||||||||||||||    
T  25853320 ttgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 30098138 - 30098309
Alignment:
Q  25 taaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 124  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30098138 taaaaccgcctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 30098237  T
Q  125 ttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||| |||||||||| |||||||||||||||||   |||| ||||||||  ||||||||||||||||||    
T  30098238 ttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 32535145 - 32534962
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32535145 agcataggggaaggtataaaaccgcctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 32535046  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| ||||| |||||||||| |||||||||||  ||||| ||||||||  ||||||||||||||    
T  32535045 ttgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 23644823 - 23645015
Alignment:
Q  9 agcataggggt-aggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23644823 agcataggggttaggtctaaaaccgcctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgata 23644922  T
Q  108 attgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||| |||| |||||||||||| |||||||| ||||||| |||||||||||| ||||| ||||||||  |||||| |||||||||| ||||    
T  23644923 attgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccgaaaa 23645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 26837538 - 26837358
Alignment:
Q  17 ggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26837538 ggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 26837439  T
Q  117 ccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    || ||| ||| |||| |||||||||||||||| |||||||||||| |||||  || ||||  |||| ||||||||| ||||    
T  26837438 ccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 26274753 - 26274570
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||  |||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26274753 agcatagacgtaggtctaaaactgcctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 26274654  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||  || ||||| |||| |||||||||    
T  26274653 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 24300742 - 24300577
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24300742 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataa 24300643  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgag 174  Q
    |||||| ||| |||| ||||||| ||||||| ||||||||||||||||| ||  ||||| ||||||    
T  24300642 ttgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacgag 24300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 41047060 - 41047215
Alignment:
Q  11 cataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41047060 catatgggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 41047159  T
Q  111 gaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaa 167  Q
    |||||| | |||| ||||||| ||||||| ||| ||||||||||||||||| |||||    
T  41047160 gaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaa 41047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 39555962 - 39556122
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  39555962 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgtttt 39556060  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  39556061 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 31779037 - 31779199
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  31779037 ctaaaactgacatttctctgcgtttttggagaat-aaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 31779135  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  31779136 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 20840720 - 20840557
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||||||||  ||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |    
T  20840720 ctaaaactgtcatttctctgcgtttaaggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 20840622  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  20840621 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 20840557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 25853612 - 25853770
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25853612 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 25853710  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||| | || ||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  25853711 aaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 37727089 - 37726928
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  37727089 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 37726991  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| ||||||||||| || |||||||| ||||||||  ||||||||||||||||||    
T  37726990 aaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 5137140 - 5136978
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  5137140 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 5137042  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||| ||||| |||||||||| | ||||| ||||||||  |||||||||||||| ||||    
T  5137041 aaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 48453144 - 48452986
Alignment:
Q  39 actgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaag 138  Q
    |||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||     
T  48453144 actgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  139 ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||||||||||||||||||||| ||||| ||||| ||  ||||||||||| ||||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcctaa 48452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 24300941 - 24301106
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||| |||| |    
T  24300941 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgtttt 24301039  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||| |||||||||| |||||||||||| ||||| ||||||||  ||||||||||||||||||||||    
T  24301040 aaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 24301106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 41046860 - 41046703
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  41046860 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41046762  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||| |||||||||||| | ||| ||||| ||||||||  ||||||||||||||    
T  41046761 aaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 32535344 - 32535513
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat-----gataattgaaggaccattttgttct 128  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||     ||||||||||||||| |||||||||    
T  32535344 ctaaaactatcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgttct 32535441  T
Q  129 gttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||| ||||    
T  32535442 gttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 32535513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 23644622 - 23644461
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| | |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  23644622 ctaaaactattatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttt 23644524  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||| |||||||||| |||||||||||| |||||  |||||||  ||||||||||||||||||    
T  23644523 aaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 27393962 - 27394123
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| | ||||||||||||||||||||||||||||| | |||||||||||| |    
T  27393962 ctaaaactgttatttctctgcgtttttggagaat-aaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttt 27394060  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||| |||||||||  |||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  27394061 aaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 30104641 - 30104477
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| | ||   | ||||| || ||||||||||||||||||||||||||||||||||||||||| || | || |||| |    
T  30104641 ctaaaactgtcatttctctgcgtttttagataat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgtttt 30104544  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||||||||||||||| ||||||||||||  |||| ||||||||  ||||||||||||||||||||||    
T  30104543 aaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaaaa 30104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 43973601 - 43973441
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  43973601 ctaaaactgttatttatctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 43973503  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||  | || ||||||||||||  |||| ||||||||  |||||||||||||||||    
T  43973502 aaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 26837741 - 26837905
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || |||||||| ||||||||||||||||||||| ||||| |||| ||||||||| || |    
T  26837741 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatttt 26837839  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||| |||||| ||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||||    
T  26837840 aaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 26837905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 22425209 - 22425354
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcagg 144  Q
    |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||| |    
T  22425209 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatg 22425307  T
Q  145 accagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatta 191  Q
    ||||| ||||||||||| || || ||||||||  |||||||||||||    
T  22425308 accagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 29801473 - 29801356
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||  ||||| ||||| ||     
T  29801473 ggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgac 29801374  T
Q  178 taaaagtgtaattaagcc 195  Q
     |||||||||||||||||    
T  29801373 caaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 23228427 - 23228552
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||| || || |||||||||||| |||||     
T  23228427 aaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaa 23228525  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    |||| |||  |||||||||||||||||    
T  23228526 cacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 180  Q
    ||||| |||| |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||  ||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  181 aagtgtaattaagc 194  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 17464876 - 17465038
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || |||||||| |||| |||||||||||||||||||||||||||| ||||||||| ||     
T  17464876 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattt 17464974  T
Q  133 taaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||   |||||||||| || |||| ||||| ||||||||  |||| |||||||||||||    
T  17464975 taaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 25612396 - 25612519
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||||||||||||||||||||||| || |||  ||||||||| || |||||||||||||||| ||||||||||||  ||||     
T  25612396 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaa 25612495  T
Q  169 cacgaggattaaaagtgtaattaa 192  Q
    ||||||||  ||||||||||||||    
T  25612496 cacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 26274952 - 26275077
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||||| || |||||  | ||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| |    
T  26274952 ctaaaactgtcatttctctgcggttttggagaat-aaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgtttt 26275049  T
Q  134 aaaagggcaggaccagtttcgtgagtag 161  Q
    ||||||| ||||||||||||||||||||    
T  26275050 aaaagggtaggaccagtttcgtgagtag 26275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 51474753 - 51474884
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||||||||||||||||||||| | |||||| |||||||| |||| |||||||||| ||||| |||||||||||  |||||     
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  169 cacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||| | |  ||||||||||||||||||||||    
T  51474853 cacgggaaccaaaagtgtaattaagcctaaaa 51474884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 50116828 - 50116954
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||| ||||||||| ||  ||||||||| ||||| |||||||||||   ||||     
T  50116828 aaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaa 50116927  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||| |||||||||||||||||    
T  50116928 cacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 32697128 - 32697244
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||  ||| | |||||||||||| | ||| ||||||||     
T  32697128 ggtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggac 32697227  T
Q  178 taaaagtgtaattaagc 194  Q
     |||| | |||||||||    
T  32697228 caaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 18010176 - 18010272
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||| | |||| |||||||||||||| ||| || ||||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaaaacaggaggat 18010272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 25420560 - 25420684
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||| |||| || |||||||||  || || ||||||||||||  ||||     
T  25420560 aaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaa 25420659  T
Q  169 cacgaggattaaaagtgtaattaag 193  Q
     |||| ||| |||||||||||||||    
T  25420660 tacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 37220674 - 37220555
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||| ||| || |  | | |||||||| |||||  |||||||     
T  37220674 ggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggac 37220575  T
Q  178 taaaagtgtaattaagccta 197  Q
     |||||||||||||||||||    
T  37220574 caaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 45966049 - 45965936
Alignment:
Q  84 acgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaag 183  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| |||| |||||| ||||||  |  ||||||||||  ||||| ||||||||  |||||    
T  45966049 acgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaag 45965950  T
Q  184 tgtaattaagccta 197  Q
    ||||||||||||||    
T  45965949 tgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 55192277 - 55192222
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  55192277 ctaaaactgtcatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8873869 - 8873784
Alignment:
Q  15 ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    |||||||||  ||||  |||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||| ||||| ||||    
T  8873869 ggggtaggtccaaaattgcctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggaggtaagactaaaactgcaaaaaaa 8873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 27200078 - 27200150
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27200078 ctaaacctgtcatttctctgcgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgata 27200150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 37222041 - 37222118
Alignment:
Q  120 ttttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||| ||||| |||||||||| ||| ||||||||  |||| ||||||||  |||||||||||||||||||    
T  37222041 ttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 2323553 - 2323466
Alignment:
Q  19 taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||| |||||  ||||||||||||||||| || | |||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  2323553 taggtctaaaattgcctaaaactgtcatttatccgtgtttctggagtt-gaaaataggaggtaggactaaaattgcaaaaaacatgata 2323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 37075848 - 37075781
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||    
T  37075848 ctaaaacggtcatttctctgcgtttctggag-ttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 50900710 - 50900637
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    |||||||| |||||| |||||||||||||||||||||  |||||| ||| |||||||||| ||||||||| ||||    
T  50900710 gggtaggtctaaaactgcctaaaactgtcatttctctatgtttctagag-ttgaaaatagaaggtaggactaaaa 50900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 55389765 - 55389641
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||  ||      
T  55389765 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 55389667  T
Q  134 aaaagggcaggaccagtttcgtgagt 159  Q
    |||| || ||||||| ||||||||||    
T  55389666 aaaaaggtaggaccattttcgtgagt 55389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 37076034 - 37076133
Alignment:
Q  9 agcatagggg-taggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||| || || |||||| ||||||||||| ||||||||| ||||||| |||||  ||||||| ||||| ||| ||||||| || ||| ||||||    
T  37076034 agcataggggataagtctaaaactgcctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgata 37076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 23227370 - 23227320
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 131  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||||    
T  23227370 aggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtt 23227320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 50662798 - 50662890
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  50662798 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagctaggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 50662890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 25419242 - 25419133
Alignment:
Q  98 aaaaatgataattgaa-ggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||| ||||  |||||||||||| ||||||||||| || | |||||||||||  | ||| ||||| ||  |||||| |||| |||| |    
T  25419242 aaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacgaagaccaaaagtataatcaagctt 25419143  T
Q  197 aaaatttaat 206  Q
    ||||| ||||    
T  25419142 aaaatctaat 25419133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 32730775 - 32730812
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32730775 ctaaaactgtcatttctgtgcgtttctggagtttgaaa 32730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 36701482 - 36701554
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||| ||||||| || |||||||||||| |||||||||||||| ||| |||| ||||| ||| ||||||    
T  36701482 ctaaaactgccatttctatgtgtttctggagtt-gaaaataggaggtatgactaaaactgcaaaaaacatgata 36701554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 51828343 - 51828436
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttc 51828436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 8874072 - 8874138
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||| || |||| ||||| |||||    
T  8874072 ctaaaactgtcatttct-tgcgtttctggag-ttgaaaatagaaggtagaactaaaactgcaaaaaaaa 8874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 40275255 - 40275187
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaa 40275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 49407955 - 49407900
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  49407955 ctaaaattgtcatttctctgcgtttttggag-ttgaaaataggaggtatgactaaaa 49407900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 49720531 - 49720369
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||| | | |    
T  49720531 ctaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaa-aaaacgtatactttagggacgattttgttc-gattt 49720434  T
Q  134 aaaag-ggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||| || ||||||| |||||||||| |  ||||   | ||||| |||||||||||||||||||    
T  49720433 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 49720369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 51828117 - 51827956
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttg 132  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||| |||||| |||||||||| ||| || ||| || | |||| ||||||||| | |     
T  51828117 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggacgattttgttc-gatt 51828021  T
Q  133 taaaagggc-aggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||| || ||||||| |||||||||| |  ||||   | ||||  ||||||||||||||||||    
T  51828020 taaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 43222775 - 43222842
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||||||||| | |||||||||||||||  |||||||| ||| |||| |||| ||||| ||||    
T  43222775 ctaaaactgtcatttttgtgcgtttctggagttgaaaaatagggggtgggactaaaactgcaaaaaaa 43222842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 47431857 - 47431790
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||    
T  47431857 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaa 47431790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 14654577 - 14654639
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||||| |||||| |||| |||||    
T  14654577 ctaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaa 14654639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 22370757 - 22370599
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||| ||||||||||||||| || |  ||||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||  |||      
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttta 22370658  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||| || ||||||| |||||||||| |  ||||   ||||||  ||||||||||||||    
T  22370657 aaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 37847206 - 37847267
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||| |||||||||||||| |||||| || ||||||||||||| |||||| |||| |||||    
T  37847206 ctaaaattgtcatttctctgcatttctgaag-ttgaaaataggagataggactaaaactgcaa 37847267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 40839038 - 40839100
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaa 40839100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 43222550 - 43222488
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||| | | |||||||||||||  |||||||| |||||||  ||||||||||    
T  43222550 ctaaaactgtcatttttgtacgtttctggagttgaaaaatagggggtaggattaaaaatgcaa 43222488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 44676858 - 44676950
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatag-gaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||| | ||||||||||||| |||||||||| ||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  44676858 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagagagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttc 44676950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 50900914 - 50900975
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||||  |||||| ||||||| ||||||| |||||||||||||||||| |||| |||||    
T  50900914 ctaaaactgcaatttctttgcgtttatggagtt-gaaaataggaggtaggacaaaaactgcaa 50900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 52236976 - 52236935
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  52236976 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 52236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 52237203 - 52237327
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| |||||||| |||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | |||| ||||||||| | | |    
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttc-gattt 52237300  T
Q  134 aaaag-ggcaggaccagtttcgtgagt 159  Q
    ||||| || ||||||| ||||||||||    
T  52237301 aaaagaggtaggaccattttcgtgagt 52237327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 36701268 - 36701224
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagg 79  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||    
T  36701268 ctaaaattgtcatttatctgcgtttctggag-ttgaaaataggagg 36701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 40838812 - 40838775
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40838812 ctaaaactgtcatttctgtgcgtttctggagttggaaa 40838775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 46013808 - 46013901
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  46013808 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 46013901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 52375487 - 52375450
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  52375487 ctaaaactgtcatttctatgcgtttctggagttagaaa 52375450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 52375717 - 52375754
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaa 52375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 32695817 - 32695761
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 137  Q
    ||||| |||| |||||||||||| ||||| | ||||| ||||||||||||| |||||    
T  32695817 aggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaa 32695761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 34105034 - 34105102
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| |||||||||| |||| ||||  ||||| | |||| |||| ||||| |||||    
T  34105034 ctaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaa 34105102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 49408169 - 49408233
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||| ||||||| ||||||||||||| ||||||||  |||||||||| |||| ||||| ||||    
T  49408169 ctaaaactgccatttctttgcgtttctggag-ttgaaaat--gaggtaggactaaaactgcaaaaaaa 49408233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 55389983 - 55390039
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||||||||| ||||||| ||||||| ||||   ||||||||||| ||||    
T  55389983 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaa 55390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 8e-80; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 21856228 - 21856038
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21856228 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataa 21856129  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||    
T  21856128 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtctaaa 21856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 39154379 - 39154566
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39154379 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 39154478  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  39154479 ttgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 15173453 - 15173640
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  15173453 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 15173552  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||  |||||||||||||||||||    
T  15173553 ttgaaggaccattttgttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 50970464 - 50970276
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50970464 agcataggggtaggtctaaaaccgccaaaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataa 50970365  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||| | |||||| |||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  50970364 ttgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 15646379 - 15646185
Alignment:
Q  8 tagcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15646379 tagcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgata 15646280  T
Q  108 attgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatt 202  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||  |||||| |||||||||||| ||||    
T  15646279 attgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctagaatt 15646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 17433574 - 17433758
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17433574 agcataggggtaggtctaaaaccgtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17433673  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||| | ||||||||  |||||||||||||||    
T  17433674 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 29869978 - 29870169
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29869978 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29870077  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||||||  ||||||||||||||||| ||||    
T  29870078 ttgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 29870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 33144103 - 33143925
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  33144103 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataa 33144004  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgta 187  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||    
T  33144003 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 5540002 - 5539817
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5540002 agcataggggtaggtctaaaaccgcctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 5539903  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||  ||||||||||||||||    
T  5539902 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 8678727 - 8678542
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8678727 agcataggggtatgtctaaaaccgcctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 8678628  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  8678627 ttgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 18984478 - 18984665
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18984478 agcataggggaaggtctaaaaccgcctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18984577  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||  ||||||||||||||||||    
T  18984578 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 4636330 - 4636515
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4636330 agcataggggtaggtctaaaatcgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 4636429  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    |||||||| | |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  4636430 ttgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 29307326 - 29307487
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  29307326 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29307425  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||||||||||||||||||||||  |||| ||||||||  ||||||| |||||||||    
T  29307426 aaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 5962762 - 5962579
Alignment:
Q  11 cataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  5962762 cataggggtaagtttaaaaccgcctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagtt 5962663  T
Q  111 gaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    ||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||| | ||||||||  |||| |||||||||||    
T  5962662 gaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 26859229 - 26859053
Alignment:
Q  25 taaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 124  Q
    ||||||||||||||||| | | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26859229 taaaaccgcctaaaactattacttctctgcgtttctggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26859130  T
Q  125 ttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    ||||||| ||||| ||||||||||||||||| ||||| ||||| ||| ||||  ||||||||||||||||| |||||    
T  26859129 ttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagccaaaaat 26859053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 9019347 - 9019518
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  9019347 ctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 9019446  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatttaa 205  Q
    |||| ||||| |||||||| ||||||||  |||| ||||||||  ||||||||||||||||||||| |||||    
T  9019447 aaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaaactttaa 9019518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 18984279 - 18984117
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  18984279 ctaaaactatcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984181  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  18984180 aaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 17112467 - 17112282
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17112467 agcataggggtaggtctaaaaccgcctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataa 17112368  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||| ||||| |||| || |||||||||   |||| |||| |||||||| |||| || ||| |  |||||||||||||||||    
T  17112367 ttgaaggactattttattctattttaaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 50970663 - 50970824
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  50970663 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 50970761  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||    
T  50970762 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 29307113 - 29306953
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  29307113 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29307015  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||| || |||||||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  29307014 aaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 33144304 - 33144462
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |    
T  33144304 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgtttt 33144402  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||    
T  33144403 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 5540203 - 5540364
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  5540203 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgtttt 5540301  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  5540302 aaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 15646580 - 15646741
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  15646580 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 15646678  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||| |||| ||||||||||||||| ||||| ||||||||  ||||||||||||||||||    
T  15646679 aaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 8678927 - 8679086
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||| ||| |||||  | ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  8678927 ctaaaactgtcatttctctgcatttttggagaat-aaaat-ggaggtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgtttt 8679024  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||  |||||||||||||||||    
T  8679025 aaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 29869780 - 29869619
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |    
T  29869780 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttt 29869682  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||  ||||||||||||||||||    
T  29869681 aaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 26859445 - 26859606
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||| | |||||||||||||| |||||  |  |||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |    
T  26859445 ctaaaactattatttctctgcgtttttggagaat--aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgtttt 26859542  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  26859543 aaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 15173256 - 15173099
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||  || |    
T  15173256 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaatttt 15173158  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||||||||    
T  15173157 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 9019122 - 9018964
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcagg 144  Q
    |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||     
T  9019122 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcaga 9019024  T
Q  145 accagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    ||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||| ||||    
T  9019023 accagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaagttta 9018964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 5962963 - 5963120
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||| || |    
T  5962963 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctatttt 5963061  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    ||||||||| || ||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  5963062 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 21856428 - 21856588
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| ||  ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  21856428 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgtttt 21856526  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||| ||||||| ||||||| ||||||| ||||| ||||||||  |||||||||||||||||    
T  21856527 aaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 17433376 - 17433216
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| |||||||||| |||||||||||| |    
T  17433376 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 17433278  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||| |  ||||||| ||||||| ||||| || |||||  |||||||||||||||||    
T  17433277 aaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 39154179 - 39154021
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| |||||  | | ||| || |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |    
T  39154179 ctaaaactgtcatttctatgcgtttttggagaat-agaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgtttt 39154081  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||||| || ||||||||||||||  ||||| || || ||  |||||||||||||||    
T  39154080 aaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 52268416 - 52268289
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||  |||||||||||| |||||||||||||||| ||||||||| || |||||     
T  52268416 aaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 52268317  T
Q  169 cacgaggattaaaagtgtaattaagcct 196  Q
     |||||||  ||||||||||||||||||    
T  52268316 tacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 2733416 - 2733511
Alignment:
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||| || ||| ||||| ||| ||||  |||||| |||||||||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaaaattta 2733511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 47827033 - 47827141
Alignment:
Q  95 aacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagc 194  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||| ||||| |||||||||||| ||||| || |  ||| |||||||| |||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgt-attaagc 47827131  T
Q  195 ctaaaatttaa 205  Q
    | |||||||||    
T  47827132 c-aaaatttaa 47827141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggatt 178  Q
    |||||||||||| ||||||||||||||||| |||| |||  |||||||||||| ||||||||||| |||  |||| ||||||   |||| ||||||||      
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  179 aaaagtgtaattaag 193  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 44802557 - 44802722
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||| |||||||| |||| |||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| || | |||| ||||||||| |||      
T  44802557 ctaaaattgtcatttttctgtgtttctggagtt-gaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||  |||| ||||| |||||||||  |  ||||   | ||||  ||||||||||||||||||||||    
T  44802656 aaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaa 44802722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 4636132 - 4636037
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 131  Q
    ||||||||||||||||||||||||| || ||  | ||||| || ||||| || ||||||||||||||||||||| ||||||||||  |||||||||||    
T  4636132 ctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggacc-gtttgttctgtt 4636037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  120 ttttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||| | || |||||||||| ||||| |||||||||||||||||| ||||||||  |||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 17088526 - 17088587
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| || |||| |||||    
T  17088526 ctaaaactgtcatttctctgcgtttctaga-tttgaaaataggaggtagaactaaaactgcaa 17088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 45048533 - 45048594
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  45048533 atttctctgcgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 45048594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 17088310 - 17088243
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| ||||||||||| |||||| |||| |||||||||||||||||| |||| ||||| |||||    
T  17088310 ctaaaactgccatttctctgcatttctgaagtt-gaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 45048314 - 45048253
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||||| |||||| ||||||||||||| ||||||||| |||||||||| |||| |||||    
T  45048314 ctaaaactgttatttctatgcgtttctggag-ttgaaaatatgaggtaggactaaaactgcaa 45048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 9833538 - 9833630
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||| |||||||| |||| ||||| ||| || ||| || | |||| |||||||||    
T  9833538 ctaaaaatgttatttctgtgcgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacataatattttagggacgattttgttc 9833630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 9992315 - 9992223
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || ||||||||||||||||    
T  9992315 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggaccattttgttc 9992223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 8229800 - 8229732
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaa 8229732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 17641750 - 17641818
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 17641818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 39485224 - 39485163
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||| |||||| ||||||| || ||||||||||||| |||||| |||| |||||    
T  39485224 ctaaaactgtcatctctctgtgtttctgaag-ttgaaaataggagataggactaaaactgcaa 39485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 44954612 - 44954674
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| |||||    
T  44954612 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 44954674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 8230027 - 8230064
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  8230027 ctaaaactgtcatttctgtgcgtttctggagttggaaa 8230064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 16299068 - 16299160
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||| |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  16299068 ctaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 16299160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 34555766 - 34555803
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  34555766 ctaaaactgtcatttctgtgcgtttctggagttggaaa 34555803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 44291701 - 44291769
Alignment:
Q  38 aactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||| ||||||| || |||||||||||| ||||||||| |||||||| |||| ||||| ||| ||||||    
T  44291701 aactgccatttctatgtgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacatgata 44291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 44954386 - 44954349
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  44954386 ctaaaactgtcatttctgtgcgtttctggagttggaaa 44954349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 29021252 - 29021311
Alignment:
Q  36 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||| | ||||||||||||| ||||||||||| |||| ||| |||| |||||    
T  29021252 aaaactgtcatttatgtgcgtttctggag-ttgaaaatagggggtaagactaaaactgcaa 29021311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 5819115 - 5818927
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5819115 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 5819016  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||| ||||    
T  5819015 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 8647797 - 8647989
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8647797 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataa 8647896  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  8647897 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaat 8647989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 19359495 - 19359683
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19359495 agcataggggtaggtctaaaaccgcctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataa 19359594  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  19359595 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24331747 - 24331555
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa--tgat 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   |||    
T  24331747 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagat 24331648  T
Q  107 aattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||    
T  24331647 aattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcctaaa 24331555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 8461290 - 8461482
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8461290 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataa 8461389  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaat 201  Q
    |||||||||| |||||||||||| |||||| |||||| ||||||||||||||| ||||| ||||||||  |||||||||||||||||| ||||    
T  8461390 ttgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaaat 8461482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 14215425 - 14215243
Alignment:
Q  11 cataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14215425 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataact 14215326  T
Q  111 gaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||| |||||||||||| |||||||| |  ||||||||||||||||  ||||| ||||||||  |||||||||||||||    
T  14215325 gaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 164376 - 164191
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  164376 agcataggggtaggtctaaaaccgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 164278  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||||| |||| ||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||  |||||||||||||||||    
T  164277 ttgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 199 - 333
Target Start/End: Original strand, 38943753 - 38943887
Alignment:
Q  199 aatttaatggttttccttcaatgattcctccaccaaatagttgctgccacacaactacattacgcatgaaaaataactatcaggtggcaacttcaataga 298  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38943753 aatttaagggttttccttcaatgattcctccaccaaatagttgctgccacacaactacattacgcatgaaaaataactatcaggtggcaacttcaataga 38943852  T
Q  299 agcattgcacccttatagcagtaacatcaatgacc 333  Q
    |||||||||||||||||||||||||||||||||||    
T  38943853 agcattgcacccttatagcagtaacatcaatgacc 38943887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 2864940 - 2864756
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2864940 agcataggggtagttctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 2864841  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||||||||| ||||||| |||| |||||||||| || || |||||||||||| ||||| ||| ||||  |||||||||||||||    
T  2864840 ttgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 18183156 - 18182968
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  18183156 agcataggggtaggcctaaaactgcctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18183057  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||| ||  |||||||||||||| ||||    
T  18183056 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 29454926 - 29454733
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29454926 agcatatgggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataa 29454827  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaatt 202  Q
    || ||||||| |||||||||||| |||||||||| ||||| |||||||||||| ||||| ||| | ||  ||||||| |||||||||| |||||    
T  29454826 ttcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagccttaaatt 29454733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 15372060 - 15371873
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaa----aactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg 104  Q
    ||||||| ||||||| |||||||||||||    |||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  15372060 agcatagaggtaggtctaaaaccgcctaattaaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatg 15371961  T
Q  105 ataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||  |||||||| |||||||||||||||    
T  15371960 ataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 25000448 - 25000635
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25000448 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 25000547  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||| ||||||||||||||||| ||||||  || ||||| |||||||||||| ||||| || || ||  ||||||||||||||||||    
T  25000548 ttgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 16018946 - 16019134
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  16018946 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataa 16019045  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||| |||||||| |||| || |||||| ||||||||| |||||||||||  ||||| || |||||  |||||||||||||| ||||    
T  16019046 ttgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 29455127 - 29455288
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29455127 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 29455225  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||    
T  29455226 aaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 8647598 - 8647438
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8647598 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 8647500  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  8647499 aaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 15709335 - 15709522
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 115  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||    
T  15709335 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaagg 15709434  T
Q  116 accattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaattta 204  Q
    ||| |||||||||||| | |||||||| ||| |||||| ||||||| ||||| ||| | ||  ||||||||||||||||| ||||||||    
T  15709435 accgttttgttctgtt-ttaaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagccaaaaattta 15709522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 18183354 - 18183519
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  18183354 ctaaaactgttatttctctgcgtttttggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183452  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||    
T  18183453 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaaa 18183519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 2865140 - 2865302
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||| |    
T  2865140 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgtttt 2865238  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  2865239 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 5819314 - 5819474
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  5819314 ctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 5819412  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  5819413 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 24362221 - 24362383
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |    
T  24362221 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgtttt 24362319  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| |||||  |||||||  |||||||||||||||||||    
T  24362320 aaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 195
Target Start/End: Complemental strand, 19359292 - 19359136
Alignment:
Q  38 aactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaa 137  Q
    ||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  19359292 aactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaa 19359194  T
Q  138 gggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||| ||||| || |||||  |||||||||||||||||    
T  19359193 gggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 24362022 - 24361843
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||     
T  24362022 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatac 24361924  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 189  Q
    ||||||||||||||||||||||| || ||||||| || |||||||||| |||| ||||| || | |||  |||||||||||    
T  24361923 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 15372258 - 15372423
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| ||||   | ||||| ||| |||| || ||||||||||||||||||||| |||||||||| |||||||||||| |    
T  15372258 ctaaaactgtcatttctctgcgtttttggaaaat-aaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 15372356  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    |||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||||    
T  15372357 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaaaa 15372423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 34 - 199
Target Start/End: Complemental strand, 15709130 - 15708967
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |    
T  15709130 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 15709033  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||  ||||||||||||||||| ||||| ||| ||||  |||||||||||||||||||||    
T  15709032 aaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaaa 15708967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 24325397 - 24325218
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||| ||||||||||||     
T  24325397 agcataggggtaggtctaaaaccggctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcgacaaaaatgatac 24325299  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaat 189  Q
    ||||||||||||||||||||||| || ||||||| || |||||||||| |||| ||||| || | |||  |||||||||||    
T  24325298 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 8461090 - 8460928
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  8461090 ctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 8460992  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| |||||  |||| ||  ||||||| |||||||||||    
T  8460991 aaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 14215628 - 14215791
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | || ||||||||||||||||||||||||| |||||||||| |||||||||||| |    
T  14215628 ctaaaactgtcatttctctacgtttttggagaat-aaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt 14215726  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    |||||||||||| |||||||||||||||  |||| ||||||||  |||| |||||||||||||||    
T  14215727 aaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcctaa 14215791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 164576 - 164741
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  164576 ctaaaactgtcatttctctacatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 164674  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaaa 200  Q
    ||||||||| ||||||||| |||||| | ||||| || |||||| |||| | |||||||||||||||    
T  164675 aaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcctaaaa 164741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 14463906 - 14464067
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||| | ||||||||| || |    
T  14463906 ctaaaactgtcatttctctgcgtttttggagaat-aaaattgg-ggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctatttt 14464003  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||| ||  |  |||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  14464004 aaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 4222150 - 4222266
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| |||||||||| ||||| ||||||||| || ||||| ||||||||     
T  4222150 ggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggac 4222249  T
Q  178 taaaagtgtaattaagc 194  Q
     ||||||||||||||||    
T  4222250 caaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 7349436 - 7349562
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||| ||||| ||||||||||||||||| |||||||   ||||||| |||| |||||| ||||||||| ||||||||||||||||||     
T  7349436 aaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaa 7349535  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    ||||||||  |||||||||||||||||    
T  7349536 cacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 14462770 - 14462686
Alignment:
Q  33 cctaaaactgtcatttctctgcgtttctg----gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 113  Q
    |||||||||||||||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14462770 cctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 25000250 - 25000112
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||| |||||||||||| ||||||| |    
T  25000250 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgtttt 25000152  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacga 173  Q
    || |||||| |||||  ||||||||||| ||||| |||||    
T  25000151 aacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 4219780 - 4219663
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||||||||||||||||||||||||| | |||||| | ||||||||||| ||||| |||| ||||| ||| || | ||| ||||| |||||||||    
T  4219780 ggtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggat 4219681  T
Q  178 taaaagtgtaattaagcc 195  Q
     |||||||||||||||||    
T  4219680 caaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 6018441 - 6018315
Alignment:
Q  67 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaa 166  Q
    |||||||||  |||||||| |||| ||||||||||||||||||||||| |  ||||||||||||| ||||||| || ||||||||||||||||||| |||    
T  6018441 tgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaa 6018343  T
Q  167 atcacgaggattaaaagtgtaattaagc 194  Q
    | |||||| |  |||| |||||||||||    
T  6018342 aacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 10721967 - 10721873
Alignment:
Q  12 ataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  10721967 ataggggtaggtctaaaactgcctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || ||||||||||||| |||||||||||||||||  ||||||   |||||||||||| |||||||||| ||||| |||||||||||||| |||     
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  169 cacgaggattaaaagtgtaattaagcc 195  Q
    || |||||  |||| ||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 4623265 - 4623148
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||||||||||||| ||||  |||||||||| |||||||||||   |||| ||||| ||     
T  4623265 ggtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgac 4623166  T
Q  178 taaaagtgtaattaagcc 195  Q
     |||||||||||||||||    
T  4623165 caaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 16018705 - 16018588
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggat 177  Q
    ||||||||| ||||||||| |||||| |||||||||||||| ||||||||| || |||||||||| || || |||||||| ||| ||||| ||||| ||     
T  16018705 ggtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagac 16018607  T
Q  178 taaaagtgtaattaagcct 196  Q
     ||||||||||||||||||    
T  16018606 caaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 24331945 - 24332073
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaa-tgcaacaaaa-atgataattgaaggaccattttgttctgtt 131  Q
    ||||||||||||||||||||||||| |||||  | | ||| || |||||||||||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  24331945 ctaaaactgtcatttctctgcgtttttggagaat-agaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctgtt 24332043  T
Q  132 gt-aaaagggcaggaccagtttcgtgagta 160  Q
     | |||| ||||||| ||||||||||||||    
T  24332044 ttaaaaaaggcaggatcagtttcgtgagta 24332073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 27307238 - 27307148
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27307238 gggtaggtctaaaactgcctaaaactgtcatttctatgcgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 27307148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 6019189 - 6019282
Alignment:
Q  69 aaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 161  Q
    ||||| |||||||||||||||| |||||||||||||||||||| || |||  |||||||||||| |||||| ||| || |||||||||||||||    
T  6019189 aaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagtag 6019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 28495029 - 28494931
Alignment:
Q  9 agcatagg-ggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| ||||||| ||||||  ||||||| ||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  28495029 agcataggtggtaggtctaaaactacctaaaattgtcacttctctgcgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 28494931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 32305977 - 32305886
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| ||| |||||| || | |||| |||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataagaggtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttc 32305886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 41834445 - 41834511
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||| ||||| ||||    
T  41834445 ctaaaactgtcatttctctgcgtttcaagag-ttgaaaataggaggtaggactaaaactgcaaaaaaa 41834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 28495227 - 28495288
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  28495227 ctaaaactatcatttctctgcggttctggag-ttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 4624644 - 4624736
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtag 161  Q
    ||||| || ||||||||||||||||||||| |||||||||||||| ||   ||||||| |||| ||||  | || ||||| ||||||||||||    
T  4624644 aaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtag 4624736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 27307444 - 27307499
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggag-ttgaaaataggaggtaggactaaaa 27307499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 16752948 - 16753022
Alignment:
Q  27 aaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    |||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| |||| | |||| ||||| |||||    
T  16752948 aaactgcctaaaactgccatttttctgcgtttctggag-ttgaaaataggagttaggtctaaaactgcaaaaaaaa 16753022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 28290030 - 28290122
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| |||||||||    
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttc 28290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 13814155 - 13814190
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattgaa 113  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13814155 ggtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16752741 - 16752680
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||| |||||||| ||||||| ||||||| |||||||||||||| ||| |||| |||||    
T  16752741 ctaaaactatcatttctttgcgtttatggagtt-gaaaataggaggtatgacaaaaactgcaa 16752680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 15029695 - 15029732
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  15029695 ctaaaactgtcatttatgtgcgtttctggagtttgaaa 15029732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 19291517 - 19291424
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||| ||||||| ||||||| ||||  ||||| || ||| |||| ||||| ||||   ||| || |||||| |||||||||    
T  19291517 ctaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttc 19291424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 28289844 - 28289807
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28289844 ctaaaactgtcatttctgtgcgtttctggagttggaaa 28289807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 8419008 - 8419098
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||| |||||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| |||||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaaat-atagtttaaggacgattttgttc 8419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14340793 - 14340849
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||||||||||| ||||| ||||||| ||||  ||||| |||||| ||||    
T  14340793 ctaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaa 14340849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 148; Significance: 5e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 2028 - 2215
Alignment:
Q  11 cataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2028 cataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2127  T
Q  111 gaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||| |||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||    
T  2128 gaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 1827 - 1665
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  1827 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgtttt 1729  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||| ||||| || |||||  |||||||||||||||||||    
T  1728 aaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 10989 - 11168
Alignment:
Q  16 gggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 115  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10989 gggtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 11088  T
Q  116 accattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    ||| ||||||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||  |||||||||||||||||    
T  11089 accgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 10781 - 10640
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||| ||| |||||  | ||||| |  |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |    
T  10781 ctaaaactgtcatttctctgcatttttggagaat-aaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgtttt 10683  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgagga 176  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  10682 aaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 1125 - 1286
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |    
T  1125 ctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 1224  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcc 195  Q
    |||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  1225 aaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 912 - 755
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |    
T  912 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgtttt 815  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    ||||||||||||||||| |||||||||| ||||| ||||| ||  |||||||||||||||    
T  814 aaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 16855 - 17006
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16855 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 16954  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagta 160  Q
    ||||||||| ||||||||||||| ||||| ||| ||| ||||||||||||||    
T  16955 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagta 17006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 16656 - 16564
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  16656 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 64664 - 64847
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  64664 agcatagaggtaggtctaaaaccgcctaaaactgttatttttctccgtttctggagtttgaaaatagaagataggacgaaaaatgcaacaaaaatgataa 64763  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    || ||||||| |||||||||||| ||||||||| ||||||||||||||||||  ||||| ||||||||  ||||||||||||||    
T  64764 ttaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 64462 - 64301
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  64462 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 64364  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    |||||| ||||| ||||||||||||||   |||| ||||||||  ||||||||||||||||||    
T  64363 aaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 205754 - 205911
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | ||||  ||||||||  ||      
T  205754 ctaaaactgccatttctctgcgtttttggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacggttttgttcgatttg 205851  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
    |||  |||||||||| |||||||||| |  ||||    ||||| ||||||||||||||||    
T  205852 aaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 205110 - 205038
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||  |||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  205110 ctaaaacttccatttctctgtgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 4389 - 4242
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  4389 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 4290  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtg 156  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  4289 ttgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 4592 - 4754
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  4592 ctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4690  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||||||||||||||||||||||  ||||| ||||| ||  |||||||||||||||||||    
T  4691 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 111; Significance: 6e-56; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 42330 - 42172
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||||| |    
T  42330 ctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 42231  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||| ||||||| ||||||||||| ||||||||| |||||| | |||||||||||||||    
T  42230 aaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 199
Target Start/End: Original strand, 42544 - 42707
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||| |||||||||||||| ||||||||| |||||||||||| |    
T  42544 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgtttt 42641  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    |||||||||| | ||||||| ||||||||||||| |||||||   |||||| ||||||||||||||    
T  42642 aaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcctaaa 42707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 4953 - 4790
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  4953 ctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4855  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaa 198  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  4854 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 5160 - 5334
Alignment:
Q  15 ggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaag 114  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||     
T  5160 ggggtaagtctaaaaccgcctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg----acgaaaaatgcaacaaaaatgataattgaat 5255  T
Q  115 gaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaag 193  Q
     ||| |||| ||||||| ||||||| || |||||||||||||| ||| ||||| ||||||||  |||||||||||||||    
T  5256 taccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 10116 - 9935
Alignment:
Q  9 agcataggggtaggtttaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||| ||||||    
T  10116 agcataggggtatgtttaaaaccgcctaaaattgtcatttctct-cgtttcttgagtttgaaaataggaggtaggatgaaaa-tgtaacaaaattgataa 10019  T
Q  109 ttgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||||||||||||||||| |  |||||||||| || ||||||||||| ||| | ||| ||||||||  |||| |||||||||    
T  10018 ttgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 10259 - 10414
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgta 134  Q
    |||||||||||||||||||  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  10259 taaaactgtcatttctctgaatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 10356  T
Q  135 aaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaa 192  Q
    |||||| |  ||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  10357 aaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 34 - 199
Target Start/End: Original strand, 134058 - 134222
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||| | |||||||||||  |    
T  134058 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgtatt 134156  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcctaaa 199  Q
    ||||||||| ||| |||||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  134157 aaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaa 134222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 18994 - 18834
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgt 133  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||| |    
T  18994 ctaaaactgttatttctctgcgtttttggagaat-aaaatggg-ggtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgtttt 18897  T
Q  134 aaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagcct 196  Q
    ||||||||| |||||||||||||||||| ||||| ||  ||||  ||||||||||| ||||||    
T  18896 aaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 19069 - 19172
Alignment:
Q  98 aaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||||||||||| |    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 19168  T
Q  198 aaat 201  Q
    ||||    
T  19169 aaat 19172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 692 - 568
Alignment:
Q  70 aaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatc 169  Q
    |||| ||||||  |||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| || || |||||||||||| ||||| |    
T  692 aaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaac 593  T
Q  170 acgaggattaaaagtgtaattaagc 194  Q
    |||||||| ||||||||||||||||    
T  592 acgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 28674 - 28789
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaa 180  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||| ||  ||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaa 28773  T
Q  181 aagtgtaattaagcct 196  Q
    ||||||||||| ||||    
T  28774 aagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 61877 - 62000
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaat 168  Q
    ||||| || |||||||||||||||  ||||||||||||| ||||| ||  |||||||||| || |||||||| ||||||| ||||||||||||||||||     
T  61877 aaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaa 61976  T
Q  169 cacgaggattaaaagtgtaattaa 192  Q
    ||||||||| ||||||||||||||    
T  61977 cacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  121 tttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaattaagccta 197  Q
    |||||||| || ||||| ||||||| || |||||||||||| ||||| ||||||||| ||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  92 tgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacgaggattaaaagtgtaatta 191  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||| |||||||||||||| ||||||||||| || || ||  |||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  192 a 192  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 565 - 471
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggaccagtttcgtgagtagaccaaatcacga 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||  || ||||| |||||||||||| ||||| |||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacga 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 7707 - 7784
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttgtaaaagggcaggac 146  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||  |||||||||||| |||||||| |||||    
T  7707 aaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 6777 - 6818
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6777 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 6551 - 6460
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||||||||||||| |||||||||| || ||| ||||||| || |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttc 6460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 6795 - 6836
Alignment:
Q  34 ctaaaactgtcatttctctgcgtttctggagtttgaaaatagg 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  6795 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagg 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 6569 - 6478
Alignment:
Q  35 taaaactgtcatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 127  Q
    |||||||||||||||| |||||||||| || ||| ||||||| || |||||| |||| ||||| ||| || |||||| |||||| |||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaag-ttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttc 6478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University