View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16626_high_17 (Length: 284)

Name: NF16626_high_17
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16626_high_17
NF16626_high_17
[»] chr4 (49 HSPs)
chr4 (163-269)||(17670557-17670663)
chr4 (172-269)||(11702352-11702449)
chr4 (173-269)||(10386189-10386285)
chr4 (173-269)||(18860023-18860119)
chr4 (170-269)||(10248071-10248170)
chr4 (173-269)||(33927223-33927320)
chr4 (164-269)||(12786373-12786480)
chr4 (164-269)||(35510242-35510349)
chr4 (164-269)||(52006285-52006392)
chr4 (164-269)||(56199104-56199211)
chr4 (194-269)||(3720611-3720686)
chr4 (174-269)||(15811909-15812007)
chr4 (173-269)||(19820965-19821063)
chr4 (173-264)||(37102981-37103074)
chr4 (165-264)||(15445120-15445221)
chr4 (173-269)||(3797587-3797686)
chr4 (173-269)||(19827672-19827770)
chr4 (164-269)||(56195777-56195884)
chr4 (173-269)||(15404854-15404953)
chr4 (173-269)||(19859274-19859374)
chr4 (173-264)||(26060758-26060852)
chr4 (173-269)||(40795263-40795361)
chr4 (165-244)||(5681702-5681783)
chr4 (164-269)||(34319684-34319788)
chr4 (164-256)||(18911770-18911861)
chr4 (179-269)||(19864173-19864267)
chr4 (164-269)||(5673146-5673250)
chr4 (164-269)||(15429610-15429717)
chr4 (164-269)||(15436224-15436331)
chr4 (164-220)||(44165089-44165147)
chr4 (164-267)||(52530700-52530802)
chr4 (193-267)||(5677211-5677285)
chr4 (164-269)||(29325074-29325178)
chr4 (163-244)||(37739525-37739607)
chr4 (164-269)||(40902840-40902944)
chr4 (194-251)||(11649244-11649302)
chr4 (173-269)||(44808731-44808826)
chr4 (164-209)||(5820813-5820857)
chr4 (200-269)||(24043931-24044000)
chr4 (221-269)||(24150925-24150973)
chr4 (179-230)||(15851473-15851523)
chr4 (194-244)||(1388144-1388194)
chr4 (221-267)||(5706647-5706693)
chr4 (173-230)||(21217343-21217399)
chr4 (174-237)||(48013163-48013228)
chr4 (195-269)||(53094760-53094838)
chr4 (221-269)||(5670828-5670876)
chr4 (221-269)||(15432332-15432380)
chr4 (163-269)||(40616572-40616677)
[»] chr7 (39 HSPs)
chr7 (164-269)||(5826477-5826582)
chr7 (164-269)||(11825124-11825229)
chr7 (164-269)||(22232395-22232500)
chr7 (164-269)||(22254239-22254344)
chr7 (173-269)||(8258143-8258239)
chr7 (173-269)||(8398075-8398171)
chr7 (173-269)||(26153409-26153505)
chr7 (174-269)||(5796789-5796885)
chr7 (164-269)||(26557747-26557854)
chr7 (164-269)||(35961348-35961455)
chr7 (187-267)||(22257505-22257585)
chr7 (172-269)||(10345424-10345523)
chr7 (173-269)||(11397828-11397927)
chr7 (173-269)||(48645715-48645813)
chr7 (171-269)||(17731068-17731168)
chr7 (164-216)||(23467014-23467066)
chr7 (193-249)||(23467066-23467122)
chr7 (173-269)||(4595777-4595875)
chr7 (173-269)||(4695729-4695827)
chr7 (164-244)||(23776170-23776251)
chr7 (173-246)||(44363605-44363678)
chr7 (173-269)||(5241937-5242037)
chr7 (195-269)||(9864535-9864609)
chr7 (164-267)||(13907569-13907673)
chr7 (164-269)||(6603696-6603800)
chr7 (164-244)||(18560817-18560899)
chr7 (180-269)||(22611510-22611599)
chr7 (164-269)||(13449551-13449655)
chr7 (173-212)||(13809284-13809323)
chr7 (163-244)||(18559978-18560061)
chr7 (173-269)||(4543045-4543140)
chr7 (165-209)||(13842939-13842983)
chr7 (173-237)||(5747422-5747485)
chr7 (164-209)||(23224675-23224721)
chr7 (173-215)||(44363675-44363717)
chr7 (173-237)||(24918460-24918525)
chr7 (164-224)||(17152260-17152319)
chr7 (178-230)||(24783590-24783641)
chr7 (179-269)||(37415208-37415297)
[»] chr6 (34 HSPs)
chr6 (164-269)||(34502597-34502702)
chr6 (173-269)||(14966475-14966571)
chr6 (173-269)||(14969955-14970051)
chr6 (171-269)||(3826595-3826693)
chr6 (173-267)||(5617984-5618078)
chr6 (173-267)||(13095497-13095591)
chr6 (172-251)||(24371487-24371567)
chr6 (173-269)||(28107524-28107624)
chr6 (163-269)||(10290237-10290345)
chr6 (173-269)||(28111576-28111676)
chr6 (189-269)||(23842580-23842660)
chr6 (189-269)||(23848034-23848114)
chr6 (173-269)||(5260061-5260161)
chr6 (153-244)||(20186020-20186113)
chr6 (153-244)||(22149878-22149971)
chr6 (163-269)||(9954215-9954320)
chr6 (164-269)||(13005444-13005553)
chr6 (164-269)||(1125502-1125606)
chr6 (192-262)||(9839193-9839264)
chr6 (173-269)||(14281289-14281389)
chr6 (173-269)||(17106392-17106490)
chr6 (173-244)||(6514272-6514347)
chr6 (173-269)||(23008311-23008409)
chr6 (173-269)||(23779955-23780053)
chr6 (164-269)||(30655710-30655814)
chr6 (173-269)||(23381946-23382041)
chr6 (171-269)||(5737836-5737933)
chr6 (163-244)||(11192347-11192429)
chr6 (179-269)||(2372584-2372682)
chr6 (179-230)||(27649282-27649332)
chr6 (173-233)||(9313545-9313611)
chr6 (173-269)||(23384526-23384621)
chr6 (164-208)||(11248085-11248129)
chr6 (192-244)||(22560952-22561004)
[»] chr5 (34 HSPs)
chr5 (164-269)||(3195337-3195442)
chr5 (164-269)||(30764481-30764586)
chr5 (164-269)||(34652525-34652630)
chr5 (166-269)||(19686426-19686529)
chr5 (164-269)||(19689809-19689914)
chr5 (164-269)||(26548336-26548441)
chr5 (164-269)||(26551895-26552000)
chr5 (164-269)||(28562130-28562235)
chr5 (164-269)||(28565698-28565803)
chr5 (164-269)||(30761662-30761767)
chr5 (173-269)||(2453538-2453634)
chr5 (173-269)||(4099299-4099397)
chr5 (173-269)||(7271279-7271377)
chr5 (173-269)||(28787093-28787191)
chr5 (173-264)||(21332448-21332541)
chr5 (173-264)||(21335467-21335560)
chr5 (173-269)||(7625354-7625453)
chr5 (173-269)||(30066572-30066670)
chr5 (173-269)||(33552382-33552480)
chr5 (160-269)||(22936703-22936811)
chr5 (178-269)||(10629464-10629556)
chr5 (164-269)||(32838130-32838235)
chr5 (173-221)||(40799728-40799776)
chr5 (164-269)||(14015906-14016010)
chr5 (164-269)||(41876521-41876625)
chr5 (164-269)||(31575668-31575773)
chr5 (173-267)||(26752477-26752570)
chr5 (164-269)||(34832025-34832131)
chr5 (179-230)||(14616443-14616493)
chr5 (179-230)||(33921395-33921445)
chr5 (164-269)||(41306293-41306397)
chr5 (194-243)||(18765527-18765577)
chr5 (178-230)||(7649955-7650006)
chr5 (164-269)||(31863967-31864072)
[»] chr3 (54 HSPs)
chr3 (164-269)||(2784364-2784469)
chr3 (164-269)||(18883470-18883575)
chr3 (173-269)||(2279394-2279490)
chr3 (164-269)||(10960145-10960254)
chr3 (164-269)||(10963652-10963761)
chr3 (173-269)||(42354177-42354273)
chr3 (173-269)||(4250644-4250739)
chr3 (173-267)||(25888246-25888340)
chr3 (163-269)||(20728385-20728493)
chr3 (173-269)||(54735978-54736074)
chr3 (179-269)||(30157811-30157902)
chr3 (183-269)||(10967161-10967251)
chr3 (179-269)||(3306108-3306199)
chr3 (163-264)||(10885206-10885309)
chr3 (164-264)||(52200257-52200359)
chr3 (164-269)||(10902286-10902393)
chr3 (189-269)||(31549530-31549610)
chr3 (164-269)||(10881826-10881933)
chr3 (164-235)||(44509023-44509094)
chr3 (173-269)||(28007829-28007927)
chr3 (173-269)||(32287075-32287175)
chr3 (173-269)||(52309382-52309480)
chr3 (169-265)||(55034677-55034775)
chr3 (164-244)||(22993450-22993532)
chr3 (179-268)||(47051833-47051925)
chr3 (173-269)||(16244219-16244317)
chr3 (174-244)||(18542915-18542986)
chr3 (164-269)||(35412842-35412946)
chr3 (164-251)||(281948-282036)
chr3 (95-163)||(24206784-24206852)
chr3 (164-269)||(41977347-41977453)
chr3 (194-269)||(47055262-47055338)
chr3 (164-269)||(539163-539267)
chr3 (164-269)||(2873901-2874005)
chr3 (173-237)||(19304453-19304519)
chr3 (163-267)||(50461302-50461405)
chr3 (195-269)||(54461347-54461421)
chr3 (195-237)||(55031856-55031898)
chr3 (163-269)||(7486908-7487014)
chr3 (194-269)||(43809921-43809996)
chr3 (164-264)||(6434527-6434629)
chr3 (173-269)||(16184445-16184540)
chr3 (173-269)||(24125836-24125931)
chr3 (195-244)||(19301051-19301100)
chr3 (164-269)||(30691072-30691177)
chr3 (164-269)||(12541053-12541157)
chr3 (201-264)||(31857916-31857979)
chr3 (168-269)||(54724078-54724178)
chr3 (173-269)||(6922857-6922952)
chr3 (221-267)||(18641580-18641626)
chr3 (221-267)||(18644576-18644622)
chr3 (178-237)||(3292720-3292781)
chr3 (179-269)||(2775831-2775920)
chr3 (179-269)||(2779073-2779162)
[»] chr8 (27 HSPs)
chr8 (164-269)||(14188416-14188521)
chr8 (164-269)||(20262800-20262905)
chr8 (164-269)||(21049430-21049535)
chr8 (173-269)||(31986532-31986628)
chr8 (164-269)||(30645730-30645835)
chr8 (173-269)||(31981605-31981701)
chr8 (163-269)||(18695743-18695848)
chr8 (180-269)||(5964501-5964590)
chr8 (164-269)||(23644069-23644174)
chr8 (164-269)||(14421991-14422098)
chr8 (173-269)||(4868499-4868596)
chr8 (189-269)||(5980083-5980163)
chr8 (164-262)||(14589387-14589485)
chr8 (164-269)||(45155031-45155140)
chr8 (163-269)||(5538534-5538641)
chr8 (173-269)||(12583269-12583367)
chr8 (173-269)||(36710408-36710508)
chr8 (173-251)||(33883122-33883203)
chr8 (174-269)||(25231331-25231429)
chr8 (164-269)||(10664200-10664303)
chr8 (164-269)||(18825655-18825759)
chr8 (179-269)||(22173715-22173803)
chr8 (194-251)||(41836233-41836291)
chr8 (221-269)||(18824218-18824266)
chr8 (173-269)||(37681291-37681392)
chr8 (164-269)||(23597456-23597560)
chr8 (221-269)||(18721109-18721157)
[»] chr2 (45 HSPs)
chr2 (173-269)||(13518547-13518643)
chr2 (172-269)||(1503198-1503295)
chr2 (172-269)||(1506402-1506499)
chr2 (164-269)||(11060043-11060148)
chr2 (163-269)||(15719042-15719147)
chr2 (163-269)||(15703738-15703843)
chr2 (164-269)||(25820608-25820715)
chr2 (172-269)||(43723943-43724042)
chr2 (164-263)||(25138692-25138793)
chr2 (164-269)||(45457395-45457502)
chr2 (163-264)||(13137136-13137238)
chr2 (164-269)||(26366157-26366264)
chr2 (173-269)||(6827014-6827112)
chr2 (173-269)||(13971675-13971773)
chr2 (194-269)||(15470701-15470776)
chr2 (164-269)||(36808208-36808315)
chr2 (173-269)||(31427314-31427413)
chr2 (173-269)||(45454107-45454206)
chr2 (173-269)||(34682930-34683027)
chr2 (164-269)||(8888869-8888973)
chr2 (174-269)||(3252565-3252658)
chr2 (194-258)||(5666771-5666835)
chr2 (164-269)||(33310899-33311003)
chr2 (173-245)||(38460590-38460664)
chr2 (179-269)||(29440728-29440817)
chr2 (164-261)||(25959457-25959553)
chr2 (164-269)||(30274536-30274640)
chr2 (173-269)||(45499135-45499230)
chr2 (164-251)||(11347662-11347748)
chr2 (163-225)||(13137257-13137320)
chr2 (166-269)||(25874414-25874516)
chr2 (163-212)||(30926844-30926892)
chr2 (173-263)||(24238611-24238700)
chr2 (221-269)||(38015751-38015799)
chr2 (179-230)||(23673359-23673409)
chr2 (179-233)||(24384939-24384994)
chr2 (179-230)||(36327107-36327157)
chr2 (165-207)||(39023058-39023099)
chr2 (189-230)||(29436048-29436088)
chr2 (164-269)||(40781715-40781822)
chr2 (174-237)||(40937310-40937372)
chr2 (221-269)||(9185248-9185296)
chr2 (221-269)||(37279500-37279548)
chr2 (163-209)||(42368465-42368513)
chr2 (164-209)||(43207651-43207698)
[»] scaffold0737 (1 HSPs)
scaffold0737 (164-269)||(7108-7214)
[»] scaffold0214 (3 HSPs)
scaffold0214 (164-269)||(13862-13967)
scaffold0214 (164-269)||(20312-20417)
scaffold0214 (164-269)||(27878-27983)
[»] scaffold0014 (2 HSPs)
scaffold0014 (173-269)||(228890-228986)
scaffold0014 (173-269)||(223964-224060)
[»] scaffold0062 (2 HSPs)
scaffold0062 (163-269)||(67599-67704)
scaffold0062 (163-269)||(52650-52755)
[»] scaffold0360 (2 HSPs)
scaffold0360 (173-269)||(6530-6626)
scaffold0360 (173-269)||(2698-2794)
[»] scaffold0015 (1 HSPs)
scaffold0015 (163-269)||(198405-198513)
[»] scaffold0002 (2 HSPs)
scaffold0002 (166-269)||(118214-118319)
scaffold0002 (173-267)||(99007-99103)
[»] scaffold0996 (1 HSPs)
scaffold0996 (172-269)||(1690-1791)
[»] chr1 (31 HSPs)
chr1 (164-269)||(2405772-2405879)
chr1 (173-269)||(21110921-21111019)
chr1 (173-260)||(29642994-29643083)
chr1 (173-264)||(21018230-21018323)
chr1 (201-269)||(41058095-41058163)
chr1 (198-269)||(42022891-42022962)
chr1 (172-269)||(49852900-49852999)
chr1 (164-269)||(28111309-28111413)
chr1 (164-269)||(2794480-2794584)
chr1 (164-269)||(27536298-27536402)
chr1 (189-269)||(50196740-50196820)
chr1 (164-269)||(45960512-45960616)
chr1 (164-230)||(34552438-34552502)
chr1 (173-264)||(1950222-1950312)
chr1 (174-242)||(27331550-27331619)
chr1 (220-269)||(37183686-37183735)
chr1 (178-230)||(13496168-13496219)
chr1 (189-233)||(16190203-16190246)
chr1 (221-269)||(20399106-20399154)
chr1 (164-258)||(20448096-20448189)
chr1 (164-258)||(20533863-20533956)
chr1 (164-269)||(6070725-6070829)
chr1 (164-269)||(23021687-23021791)
chr1 (179-230)||(32505871-32505921)
chr1 (163-230)||(11666759-11666827)
chr1 (180-269)||(34064942-34065031)
chr1 (170-269)||(45941679-45941779)
chr1 (174-227)||(6206184-6206236)
chr1 (164-267)||(31205092-31205194)
chr1 (189-230)||(49716670-49716710)
chr1 (189-230)||(49720152-49720192)
[»] scaffold1063 (1 HSPs)
scaffold1063 (173-269)||(2748-2846)
[»] scaffold0080 (1 HSPs)
scaffold0080 (173-269)||(27372-27470)
[»] scaffold0045 (1 HSPs)
scaffold0045 (173-269)||(90021-90119)
[»] scaffold0034 (1 HSPs)
scaffold0034 (164-263)||(48173-48272)
[»] scaffold0757 (1 HSPs)
scaffold0757 (173-269)||(5613-5711)
[»] scaffold2073 (1 HSPs)
scaffold2073 (164-269)||(627-736)
[»] scaffold0520 (1 HSPs)
scaffold0520 (173-269)||(1312-1410)
[»] scaffold0007 (2 HSPs)
scaffold0007 (195-264)||(248786-248855)
scaffold0007 (221-259)||(92701-92739)
[»] scaffold1755 (1 HSPs)
scaffold1755 (199-269)||(394-464)
[»] scaffold0233 (1 HSPs)
scaffold0233 (164-251)||(10209-10296)
[»] scaffold0250 (1 HSPs)
scaffold0250 (164-269)||(19648-19752)
[»] scaffold0005 (1 HSPs)
scaffold0005 (164-269)||(293270-293374)
[»] scaffold0962 (1 HSPs)
scaffold0962 (164-244)||(3048-3127)
[»] scaffold0412 (1 HSPs)
scaffold0412 (164-269)||(383-491)
[»] scaffold1809 (1 HSPs)
scaffold1809 (173-269)||(326-423)
[»] scaffold0352 (1 HSPs)
scaffold0352 (179-230)||(2633-2683)
[»] scaffold0427 (1 HSPs)
scaffold0427 (165-249)||(3554-3637)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 17670663 - 17670557
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  17670663 atgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactatgttaatctcaacttagcaataaagttaat 17670564  T
Q  263 atctagg 269  Q
    |||||||    
T  17670563 atctagg 17670557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 11702352 - 11702449
Alignment:
Q  172 attttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  11702352 attttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctagg 11702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 10386285 - 10386189
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  10386285 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttagg 10386189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 18860119 - 18860023
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  18860119 ttttagcaagtgtactaaaaatatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 18860023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 10248170 - 10248071
Alignment:
Q  170 atattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  10248170 atattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaaactagcaataaagttaatatctagg 10248071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 33927320 - 33927223
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  33927320 ttttagcaagtgtactaaaactatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 33927223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 12786480 - 12786373
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||    
T  12786480 tgatagatattttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaa 12786381  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  12786380 tatttagg 12786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 35510349 - 35510242
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||||||||| |  ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||||| ||    
T  35510349 tgatagatattttagcaagtgtactaaaaatgtatccaagtaataaaataaattcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaa 35510250  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  35510249 tatttagg 35510242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 52006285 - 52006392
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||  |||||| ||    
T  52006285 tgatagatattttagcaagtgtactaaaaatgaatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcgataaagtaaa 52006384  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  52006385 tatttagg 52006392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 56199211 - 56199104
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||| ||||| |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  56199211 tgatagat-ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgtta 56199113  T
Q  261 atatctagg 269  Q
    |||||||||    
T  56199112 atatctagg 56199104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 3720686 - 3720611
Alignment:
Q  194 tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  3720686 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 3720611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 15811909 - 15812007
Alignment:
Q  174 tttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||| |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  15811909 tttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 15812007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 19821063 - 19820965
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||| ||||    
T  19821063 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 19820965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 37102981 - 37103074
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    ||||| |||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||    
T  37102981 ttttagcaagtgtactaaaaatgcatcaaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatat 37103074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 15445120 - 15445221
Alignment:
Q  165 gatagatattttaacaagtgtactaaa-actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||  ||| |||||| |||||| |||||| |||    
T  15445120 gatagatattttagcaagtgtactaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttagcaataaagtaaat 15445219  T
Q  263 at 264  Q
    ||    
T  15445220 at 15445221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 3797587 - 3797686
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  3797587 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 3797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 19827770 - 19827672
Alignment:
Q  173 ttttaacaagtgtactaaaactatc--gaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| | ||  |||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||| ||||    
T  19827770 ttttagcaagtgtactaaaaatgtctcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 19827672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 56195884 - 56195777
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||| ||||| |||||||||||||| |  |||||||||||||||| |||||||||| |||||||| ||||||| |||||| |||||| ||| ||||    
T  56195884 tgatagat-ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtattcacgaggattgtgttaatctcaatttagcaataacgtta 56195786  T
Q  261 atatctagg 269  Q
    |||||||||    
T  56195785 atatctagg 56195777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 15404854 - 15404953
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||  |  |||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||| ||| |||||||||||||    
T  15404854 ttttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgacgactgtgttaatctcaatttagcaataacgttaatatctagg 15404953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 19859274 - 19859374
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    |||||||||||||||||||||||| |||||||||||    |||||||||||||||   |||||| |||| |||||| |||||| ||| ||||||||||||    
T  19859274 ttttaacaagtgtactaaaactatagaagtaataaaatttataagttcgtatccaaagggactgagttaatctcaatttagcaataaggttaatatctag 19859373  T
Q  269 g 269  Q
    |    
T  19859374 g 19859374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 26060852 - 26060758
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    ||||| |||||||||||||| |  ||||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  26060852 ttttagcaagtgtactaaaaatgtatcgaagtaataaaaataagttcgtatccacgaggactatgttaatctcaagttagcaataaggttaatat 26060758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 40795361 - 40795263
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||| |||| |||||||||| |||||||||| |||||| |||||| |||||| ||||| ||||    
T  40795361 ttttagcaagtgtactaaaaatgtatcgaagtaataaaattagtttgtatccacgaagactgtgttaatctcaatttagcaataaagtaaatatttagg 40795263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 5681783 - 5681702
Alignment:
Q  165 gatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||| ||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  5681783 gatagattttttagcaagtgtactaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtattaatctcaa 5681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 34319684 - 34319788
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  34319684 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 34319781  T
Q  263 atctagg 269  Q
    || ||||    
T  34319782 atttagg 34319788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 18911861 - 18911770
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaa 256  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  |||| |||||||||||||||||| |||||| |||||| ||||    
T  18911861 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgtttccacgaggactgtgttaatctcaatttagcaataaa 18911770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 19864173 - 19864267
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||||||||||||||    |||||||||||| ||   |||| |||||| |||||| |||||| ||| |||||||||||||    
T  19864173 caagtgtactaaaactatcgaagtaataaaatttataagttcgtattcagagggaccgtgttaatctcaatttagcaataaggttaatatctagg 19864267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 5673250 - 5673146
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| | |||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  5673250 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 5673153  T
Q  263 atctagg 269  Q
    || ||||    
T  5673152 atttagg 5673146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 15429610 - 15429717
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||| |||||| |||| ||| |||| |||||||||||| ||||| |||||||||||||||||||||||  ||| |||||| ||| || |||||| ||    
T  15429610 tgatagacattttagcaagcgtattaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaa 15429709  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  15429710 tatttagg 15429717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 15436224 - 15436331
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||| |||||| |||| ||| |||| |||||||||||| ||||| |||||||||||||||||||||||  ||| |||||| ||| || |||||| ||    
T  15436224 tgatagacattttagcaagcgtattaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaa 15436323  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  15436324 tatttagg 15436331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 44165147 - 44165089
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtat 220  Q
    |||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||    
T  44165147 tgatagatattttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtat 44165089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 52530700 - 52530802
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| |||| |||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  52530700 tgatagatattttagcaagcgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 52530797  T
Q  263 atcta 267  Q
    |||||    
T  52530798 atcta 52530802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 5677211 - 5677285
Alignment:
Q  193 ctatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||||||||||||||| || ||||||||||||||||| |||| || |||||| |||||| ||| |||||||||||    
T  5677211 ctatcgaagtaataaaaatatgttcgtatccacgaggattgtg-taatctcaatttagcaataaggttaatatcta 5677285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 29325178 - 29325074
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||| |||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  29325178 tgataaatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 29325081  T
Q  263 atctagg 269  Q
    |||||||    
T  29325080 atctagg 29325074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 37739525 - 37739607
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||||||||| | |||||||| ||||| |||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||    
T  37739525 atgatagatattt-agcaagtgtattaaaaactatcgaagtaatacaattaagttcgtttccacgaggaccgtgttaatctcaa 37739607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 40902840 - 40902944
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||| |||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||| | |||||| |||    
T  40902840 tgataaatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagtaataaagtaaat 40902937  T
Q  263 atctagg 269  Q
    || ||||    
T  40902938 atttagg 40902944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 11649244 - 11649302
Alignment:
Q  194 tatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||| |||||| ||||||    
T  11649244 tatcgaaataataaaaataagttcgtatccatgaggactgtgttaatctcaatttagca 11649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 44808731 - 44808826
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  44808731 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 44808826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 5820857 - 5820813
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  5820857 tgatagat-ttttaacaagtgtactaaaattatcgaagtaataaaa 5820813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 24043931 - 24044000
Alignment:
Q  200 agtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||| |||| ||  |||||||||||| |||||| |||||| |||||| ||||| ||||    
T  24043931 agtaataaaataagtttgtattcataaggactgtgttaatctcaatttagcaataaagtaaatatttagg 24044000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 24150973 - 24150925
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  24150973 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 24150925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 15851523 - 15851473
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||||| ||||||||||||||||||  | ||||||||||||||||||||    
T  15851523 caagtgtaccaaaactatcgaagtaatagta-aagttcgtatccacgaggac 15851473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 1388194 - 1388144
Alignment:
Q  194 tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||||||||||||||||| |||| || || |||||||||||| ||||||    
T  1388194 tatcgaagtaataaaataagatcgtttcaacaaggactgtgttaatctcaa 1388144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 5706693 - 5706647
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  5706693 ccacgaggactgtgttaatctcaatttagcaataaggttaatatcta 5706647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 21217343 - 21217399
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| |||||||||||||||||| ||||||||| | || ||||||| |||||||||    
T  21217343 ttttaataagtgtactaaaactatcaaagtaataata-aaattcgtattcacgaggac 21217399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 48013163 - 48013228
Alignment:
Q  174 tttaacaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgtta 237  Q
    |||| |||||||||||||| |||||||||||||| ||| ||||| || ||||||||||| ||||||    
T  48013163 tttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccacgaggaccgtgtta 48013228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 53094838 - 53094760
Alignment:
Q  195 atcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||    ||||||||||||||||  ||||||||||| |||||| |||||| ||  |||||||| ||||    
T  53094838 atcgaagtaataaactttataagttcgtatccacagggactgtgttaatctcaatttagcaatatggttaatatatagg 53094760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 5670876 - 5670828
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  5670876 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 5670828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 15432380 - 15432332
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  15432380 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 15432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 40616572 - 40616677
Alignment:
Q  163 atgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||| |||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||| |    
T  40616572 atgataaatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttga 40616669  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  40616670 tatttagg 40616677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 5826477 - 5826582
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  5826477 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcttatccacgaggactgtgttaatctcaacttagcaataaagttaata 5826576  T
Q  264 tctagg 269  Q
    ||||||    
T  5826577 tctagg 5826582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 11825124 - 11825229
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  11825124 tgataaatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaata 11825223  T
Q  264 tctagg 269  Q
    ||||||    
T  11825224 tctagg 11825229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 22232395 - 22232500
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  22232395 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaggttaata 22232494  T
Q  264 tctagg 269  Q
    ||||||    
T  22232495 tctagg 22232500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 22254344 - 22254239
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  22254344 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaggttaata 22254245  T
Q  264 tctagg 269  Q
    ||||||    
T  22254244 tctagg 22254239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 8258239 - 8258143
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  8258239 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatctacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 8258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 8398171 - 8398075
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  8398171 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 8398075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 26153505 - 26153409
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  26153505 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatatagg 26153409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 5796885 - 5796789
Alignment:
Q  174 tttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  5796885 tttagcaagtgtactaaaactatcgaagtaataaaaataagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctagg 5796789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 26557854 - 26557747
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaac--tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||| ||    
T  26557854 tgatagatattttagcaagtgtactaaaaacgtatcgaagtaataaaataagttcatatccacgaggactgtgttaatctcaatttagcaataaagtaaa 26557755  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  26557754 tatttagg 26557747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 35961455 - 35961348
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||||||||  ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||    
T  35961455 tgatagatattttagaaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaa 35961356  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  35961355 tatttagg 35961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 22257585 - 22257505
Alignment:
Q  187 ctaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| |||||||||||    
T  22257585 ctaaaactatcgaagtaataaaataagatcgtatccacgaggactgtgttaatctcaacttaacaataaggttaatatcta 22257505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 10345523 - 10345424
Alignment:
Q  172 attttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||| ||||    
T  10345523 attttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 10345424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 11397828 - 11397927
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  11397828 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 11397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 48645813 - 48645715
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| ||||| ||||    
T  48645813 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagg 48645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 17731168 - 17731068
Alignment:
Q  171 tattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||||| |||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||| |||||  |||||| |||||| ||||| |||    
T  17731168 tattttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacaaggactgtgttaatctcagtttagcaataaagtgaatatttag 17731069  T
Q  269 g 269  Q
    |    
T  17731068 g 17731068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 23467014 - 23467066
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttc 216  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23467014 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttc 23467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 23467066 - 23467122
Alignment:
Q  193 ctatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttag 249  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  23467066 ctatcgaagtaataaaataagttcgtatacacgaggactgtgttaatctcaacttag 23467122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 4595777 - 4595875
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||| |||| ||| |||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  4595777 ttttagcaagtgtactaaaaatgcatcgaagtaataaaatatgttcatattcacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 4595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 4695827 - 4695729
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||| ||||| |  ||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||| |||||| ||||| ||||    
T  4695827 ttttagcaagtgtattaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctaaatttagcaataaagtaaatatttagg 4695729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 23776251 - 23776170
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaat-aaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||| || ||||| ||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||||    
T  23776251 tgataaatcttttagcaagtatactaaaactatcgaagtaataaaaataagttcgtttctacgaggactgtgttaatctcaa 23776170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 44363605 - 44363678
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaact 246  Q
    ||||| ||||||||| |||| ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  44363605 ttttagcaagtgtaccaaaaatatcgaagtaataaagtaagttcgtatcctcgagaactgtgttaatctcaact 44363678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 5241937 - 5242037
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||| ||||||||||||||| ||||||||||||||    ||||||| ||||||||  ||||||||||| |||||| |||||| ||| |||| |||||||    
T  5241937 ttttatcaagtgtactaaaaccatcgaagtaataaaatttataagtttgtatccacagggactgtgttaatctcaatttagcaataaggttactatctag 5242036  T
Q  269 g 269  Q
    |    
T  5242037 g 5242037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 9864535 - 9864609
Alignment:
Q  195 atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||| | |||||| ||||| ||||    
T  9864535 atcgaagcaataaaataagttcgtatccatgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 9864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 13907569 - 13907673
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaa-ctatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||| | |||||||||||||| |||| ||||| |||||| ||||||| ||| ||| |||||||||||| |||||| |||||| ||| |||||    
T  13907569 tgatagatattt-agcaagtgtactaaaaactatagaagtgataaaaataagttcatatgcacaaggactgtgttaatctcaatttagcaataaggttaa 13907667  T
Q  262 tatcta 267  Q
    ||||||    
T  13907668 tatcta 13907673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 6603800 - 6603696
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  6603800 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 6603703  T
Q  263 atctagg 269  Q
    |||||||    
T  6603702 atctagg 6603696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 18560817 - 18560899
Alignment:
Q  164 tgatagatattttaacaagtgtact-aaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||| ||||| || ||| |||||||  ||||||||||||    
T  18560817 tgatagatattttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccgcgaggaccatgttattctcaa 18560899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 22611510 - 22611599
Alignment:
Q  180 aagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||| |  |||||||||||||||||||||||||  |||||||||| ||||| |||||| |||||| || ||| ||||| ||||    
T  22611510 aagtgtactaaaaatgcatcgaagtaataaaataagttcgta--cacgaggactttgttaatctcaatttagcaatatagtaaatatttagg 22611599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 13449551 - 13449655
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||| ||||| |||||| |||||| |||||| |||    
T  13449551 tgatagatattttagcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactatgttaatctcaatttagcagtaaagtaaat 13449648  T
Q  263 atctagg 269  Q
    || ||||    
T  13449649 atttagg 13449655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 13809284 - 13809323
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataa 212  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13809284 ttttagcaagtgtactaaaactatcgaagtaataaaataa 13809323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 18559978 - 18560061
Alignment:
Q  163 atgatagatattttaacaagtgtact-aaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||||||||||| ||| |||||| |||||||||||||| ||| ||| |||||||  ||||||||||| |||||| ||||||    
T  18559978 atgatagatattttagcaaatgtactaaaaactatcgaagtcatataataaagttcgattccacgaggaccgtgttaatctcaa 18560061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 4543140 - 4543045
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  4543140 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 4543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 13842983 - 13842939
Alignment:
Q  165 gatagatattttaacaagtgtactaaaactatcgaagtaataaaa 209  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||    
T  13842983 gatagatattttagcaagtgtaccaaaactatcgaagtagtaaaa 13842939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 5747422 - 5747485
Alignment:
Q  173 ttttaacaagtgtactaaaa-ctatcgaagtaataaaataagttcgtatccacgaggactgtgtta 237  Q
    ||||| ||| |||||||||| |||| |||||||||||||  |||||||||||||||||||| ||||    
T  5747422 ttttagcaaatgtactaaaaactattgaagtaataaaat--gttcgtatccacgaggactgcgtta 5747485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 23224675 - 23224721
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaa 209  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  23224675 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaa 23224721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 44363717 - 44363675
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagtt 215  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||    
T  44363717 ttttagcaagtgtactaaaaatatcgaagtaataaaatgagtt 44363675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 24918525 - 24918460
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa-ataagttcgtatccacgaggactgtgtta 237  Q
    ||||| ||||| ||||||||||||| ||||||||||   ||||||||||||||||| ||| |||||    
T  24918525 ttttagcaagtatactaaaactatcaaagtaataaatcaaagttcgtatccacgagaactctgtta 24918460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 17152319 - 17152260
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccac 224  Q
    ||||||||| ||| |||||||||| ||||||||||||||| ||| | ||||| ||||||||    
T  17152319 tgatagataatttgacaagtgtaccaaaactatcgaagtagtaata-aagtttgtatccac 17152260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24783641 - 24783590
Alignment:
Q  178 acaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||| || ||||||||||||||||| |||||| || ||||||||||||||    
T  24783641 acaagtgaaccaaaactatcgaagtaat-aaataaatttgtatccacgaggac 24783590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 37415208 - 37415297
Alignment:
Q  179 caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| || ||||| ||||    
T  37415208 caagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaatatttagg 37415297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 34502702 - 34502597
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  34502702 tgatagatattttagcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaata 34502603  T
Q  264 tctagg 269  Q
    ||||||    
T  34502602 tctagg 34502597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 14966571 - 14966475
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  14966571 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 14966475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 14970051 - 14969955
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  14970051 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccatgaggactatgttaatctcaacttagcaataaagttaatatctagg 14969955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 3826595 - 3826693
Alignment:
Q  171 tattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||    
T  3826595 tattttagcaagtgtactaaaactatcgaagtaataagataagttcgtatccacaaggactgtgttaatctcaacttagcaataaagttaatatttagg 3826693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 5617984 - 5618078
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  5617984 ttttagcaagtgtactaaaactatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaaattaatatcta 5618078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 13095497 - 13095591
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||| |||||||||||||||    
T  13095497 ttttagcaaatgtactaaaactatcgaagtaataaaataagtttgtatccacgatgactttgttaatctcaacttagcaataaagttaatatcta 13095591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 24371567 - 24371487
Alignment:
Q  172 attttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  24371567 attttaacaagtgtactaaaattatcgaagtaataaaaataagttcgtatccacgaggactgtgttaatctcaatttagca 24371487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 28107524 - 28107624
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||||||| |||||| |||||||||| ||||||||||||    
T  28107524 ttttaacaagtgtactaaaactatcgaagtaataaaatttataagttcgtatccacagggattgtgttaatctcaatttagcactaaggttaatatctag 28107623  T
Q  269 g 269  Q
    |    
T  28107624 g 28107624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 10290345 - 10290237
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||  ||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||| |    
T  10290345 atgatagactttttagcaagtgtactaaaaatgtatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataaagtga 10290246  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  10290245 atatttagg 10290237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 28111576 - 28111676
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaat----aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||| ||||||||||||||||||||||||||||||||    ||||||||||||||  ||||||||||| |||||| |||||||||| | ||||||||||    
T  28111576 ttttagcaagtgtactaaaactatcgaagtaataaaatttataagttcgtatccacatggactgtgttaatctcaatttagcactaaggataatatctag 28111675  T
Q  269 g 269  Q
    |    
T  28111676 g 28111676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 23842580 - 23842660
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||| | ||||| ||||    
T  23842580 aaaactatcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataaatatttagg 23842660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 23848114 - 23848034
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||| ||||    
T  23848114 aaaactatcgacataataaaataagttcgtatccacgaggactgtgttaatctcaatttaacactaaagtaaatatttagg 23848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 5260161 - 5260061
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaat----aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||| ||| ||||||||||||||||||||||||||||    |||||||||||||| |||||| ||||| |||||| |||||| ||| ||||||||||||    
T  5260161 ttttagcaaatgtactaaaactatcgaagtaataaaatttataagttcgtatccacaaggactatgttaatctcaatttagcaataaggttaatatctag 5260062  T
Q  269 g 269  Q
    |    
T  5260061 g 5260061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 20186113 - 20186020
Alignment:
Q  153 tggatggtggatgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||| | |||||||||  ||||| |||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20186113 tggatgctagatgatagactttttagcaagtgcactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaa 20186020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 22149878 - 22149971
Alignment:
Q  153 tggatggtggatgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||| | |||||||||  ||||| |||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22149878 tggatgctagatgatagactttttagcaagtgcactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaa 22149971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 9954320 - 9954215
Alignment:
Q  163 atgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||    
T  9954320 atgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaa 9954223  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  9954222 tatttagg 9954215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 13005553 - 13005444
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||  ||||||| |||||| |||||| |||  ||    
T  13005553 tgatagaatttttagcaagtgtactaaaactatcgaagtaataaaatttataagttcgtatccacatgggttgtgttaatctcaatttagcaataagatt 13005454  T
Q  260 aatatctagg 269  Q
    ||||||||||    
T  13005453 aatatctagg 13005444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 1125502 - 1125606
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||| ||||||||||||| |||||| |||||| ||| ||||||    
T  1125502 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccatgaggactgtgttaatctcaatttagcaataacgttaat 1125599  T
Q  263 atctagg 269  Q
    |||||||    
T  1125600 atctagg 1125606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 9839193 - 9839264
Alignment:
Q  192 actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||||||| ||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||||    
T  9839193 actatcgaagtaataaaaataatttcgtacccacgaggattgtgttaatctcaacttagcaataaagttaat 9839264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 14281289 - 14281389
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||| |||||||||||||||||| |||||||||||    ||||||| ||||||||   |||||||||| |||||| |||||| ||| ||||||||||||    
T  14281289 ttttagcaagtgtactaaaactatagaagtaataaaatttataagtttgtatccacagagactgtgttaatctcaatttagcaataaggttaatatctag 14281388  T
Q  269 g 269  Q
    |    
T  14281389 g 14281389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 17106392 - 17106490
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||| ||| |||||| |||||| ||  || |||||| ||||| ||||    
T  17106392 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaagacagtgttaatctcaatttcacaataaagtaaatatttagg 17106490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 6514347 - 6514272
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||| ||||||||||||||||||||||||||||||    ||||||||||||| || |||||||||||| ||||||    
T  6514347 ttttagcaagtgtactaaaactatcgaagtaataaaatttataagttcgtatctacaaggactgtgttaatctcaa 6514272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 23008409 - 23008311
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||||||||||| |||||| | |||| |||||||||||| ||||    
T  23008409 ttttagcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaataaagttaatatttagg 23008311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 23779955 - 23780053
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||||||||||| |||||| | |||| |||||||||||| ||||    
T  23779955 ttttagcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaataaagttaatatttagg 23780053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 30655814 - 30655710
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||  |  ||||  |||| |||||||||||| |||||| |||| | |||||| |||    
T  30655814 tgatagatattttagcaagtgtactaaatactatcgaagtaataaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaat 30655717  T
Q  263 atctagg 269  Q
    || ||||    
T  30655716 atttagg 30655710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 23381946 - 23382041
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| ||||||||||||||||||  |  ||||  ||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  23381946 ttttagcaagtgtactaaatactatcgaagtaataaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 23382041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 5737836 - 5737933
Alignment:
Q  171 tattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||| ||||||||||||| |||||||||||| |||||  |  |||| ||| | |||||||||||| |||||| |||||| ||| |||||||||||||    
T  5737836 tattttatcaagtgtactaaatactatcgaagtagtaaaaata--tcgtttccgcaaggactgtgttaatctcaatttagcaataaggttaatatctagg 5737933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 11192347 - 11192429
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaa-ctatcgaagtaata-aaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||||||||| | |||||||||||||| |||||||||||||| || ||||||||| |||||||| || |||||| ||||||    
T  11192347 atgatagatattt-agcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 11192429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 2372682 - 2372584
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaa----ataa----gttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||||||||||||||    ||||    ||| ||||||||   |||||||||| |||||| |||||| ||| |||||||||||||    
T  2372682 caagtgtactaaaactatcgaagtaataaaatttataagtttgtttgtatccacagagactgtgttaatctcaatttagcaataaggttaatatctagg 2372584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 27649332 - 27649282
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  27649332 caagtgaactaaaactatcgaagtaat-aaataagatcgaatccacgaggac 27649282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 9313545 - 9313611
Alignment:
Q  173 ttttaacaagtgtactaaaactat--cgaagtaataaaat----aagttcgtatccacgaggactgt 233  Q
    |||||||||||||||||||| |||  ||||||||||||||    |||||||||||||| ||||||||    
T  9313545 ttttaacaagtgtactaaaaatatatcgaagtaataaaatttataagttcgtatccacaaggactgt 9313611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 23384526 - 23384621
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| ||||||||||||||||||  |  ||||  ||||||||||||||||| | |||| |||| | |||||| ||||| ||||    
T  23384526 ttttagcaagtgtactaaatactatcgaagtaataaaaata--tcgttcccacgaggactgtgttaatttcaatttagaaataaagtaaatatttagg 23384621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 11248129 - 11248085
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaa 208  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||    
T  11248129 tgatagactttttaccaagtgtactaaaactatctaagtaataaa 11248085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 22560952 - 22561004
Alignment:
Q  192 actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||||||||||||||||||| ||||  |||| |||||| ||||| ||||||    
T  22560952 actatcgaagtaataaaataagatcgttcccacaaggactctgttaatctcaa 22561004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 3195442 - 3195337
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  3195442 tgataaatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaata 3195343  T
Q  264 tctagg 269  Q
    ||||||    
T  3195342 tctagg 3195337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 30764586 - 30764481
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  30764586 tgataaatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaata 30764487  T
Q  264 tctagg 269  Q
    ||||||    
T  30764486 tctagg 30764481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 34652525 - 34652630
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  34652525 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaata 34652624  T
Q  264 tctagg 269  Q
    ||||||    
T  34652625 tctagg 34652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 19686529 - 19686426
Alignment:
Q  166 atagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatc 265  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  19686529 atagatattttagcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatc 19686430  T
Q  266 tagg 269  Q
    ||||    
T  19686429 tagg 19686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 19689914 - 19689809
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  19689914 tgatagatattttagcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgagcactgtgttaatctcaacttagcaataaagttaata 19689815  T
Q  264 tctagg 269  Q
    ||||||    
T  19689814 tctagg 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 26548441 - 26548336
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||    
T  26548441 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagta 26548342  T
Q  264 tctagg 269  Q
    ||||||    
T  26548341 tctagg 26548336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 26552000 - 26551895
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||    
T  26552000 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagta 26551901  T
Q  264 tctagg 269  Q
    ||||||    
T  26551900 tctagg 26551895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 28562130 - 28562235
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||    
T  28562130 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagta 28562229  T
Q  264 tctagg 269  Q
    ||||||    
T  28562230 tctagg 28562235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 28565698 - 28565803
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| ||    
T  28565698 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagta 28565797  T
Q  264 tctagg 269  Q
    ||||||    
T  28565798 tctagg 28565803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 30761767 - 30761662
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  30761767 tgataaatatttcagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttaacaataaagttaata 30761668  T
Q  264 tctagg 269  Q
    ||||||    
T  30761667 tctagg 30761662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 2453634 - 2453538
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  2453634 ttttagcaagtgtactaaaactatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttagg 2453538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 4099299 - 4099397
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| ||||| ||||    
T  4099299 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaatatttagg 4099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 7271377 - 7271279
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| | ||||| ||||    
T  7271377 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataaatatttagg 7271279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 28787093 - 28787191
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||| ||||| ||||    
T  28787093 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggaccgtgttagtctcaatttagcaataaagtaaatatttagg 28787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 21332448 - 21332541
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| |||||    
T  21332448 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatat 21332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 21335467 - 21335560
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||| |||||| |||||    
T  21335467 ttttaacaagtgtactaaaaatgtatcgaagtaataaaataagtttgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatat 21335560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 7625453 - 7625354
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataa-gttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  7625453 ttttagcaagtgtactaaaaatgcatcgaagtagtaaaataaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 7625354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 30066670 - 30066572
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||| |||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  30066670 ttttagcaaatgtactaaaaatgcatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 30066572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 33552480 - 33552382
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || || ||| ||||| ||||    
T  33552480 ttttaacatgtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttaacaatagagtaaatatttagg 33552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 22936703 - 22936811
Alignment:
Q  160 tggatgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagt 258  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||||||    
T  22936703 tggatgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagt 22936800  T
Q  259 taatatctagg 269  Q
     ||||| ||||    
T  22936801 aaatatttagg 22936811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 10629556 - 10629464
Alignment:
Q  178 acaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||| || |||| ||| ||| ||||    
T  10629556 acaagtgtaccaaatactatcgaagtaataaaataagtttgtatccatgaggactgtgttaatctcaatttaacaataaaattattatttagg 10629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 32838235 - 32838130
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||| |||||||| |||||||||||||| |  |||||||||||||||  |  |||| |||||||||||||||||| |||||| ||| || ||| |||||    
T  32838235 tgataaatattttagcaagtgtactaaaaatgtatcgaagtaataaaaata--tcgtttccacgaggactgtgttaatctcaatttatcaataaggttaa 32838138  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  32838137 tatttagg 32838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 40799728 - 40799776
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatc 221  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  40799728 ttttagcaagtgtgctaaaaatatcgaagtaataaaataagttcgtatc 40799776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 14015906 - 14016010
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaac-tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||  ||||||||| ||| | |||||||||| |||||  |  |||| |||||||||||||||||| |||||| |||||| ||| ||||||    
T  14015906 tgatagattttttggcaagtgtaccaaatcctatcgaagtagtaaaaata--tcgtttccacgaggactgtgttaatctcaatttagcaataacgttaat 14016003  T
Q  263 atctagg 269  Q
    |||||||    
T  14016004 atctagg 14016010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 41876521 - 41876625
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||| | |||||| |||    
T  41876521 tgatagattttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagaaataaagtaaat 41876618  T
Q  263 atctagg 269  Q
    || ||||    
T  41876619 atttagg 41876625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 31575773 - 31575668
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaat-aaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||| ||||||||||||||   |||||||||||| ||||||||||||| ||||| ||||| || ||| |||||| | | || ||| |||| |    
T  31575773 tgatagatattt-aacaagtgtactaattttatcgaagtaataaaaataagttcgtttccacaaggaccgtattaatctcaattgaacaataacgttatt 31575675  T
Q  263 atctagg 269  Q
    |||||||    
T  31575674 atctagg 31575668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 26752477 - 26752570
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||| ||||||||| |||||| |||||| ||| |||||||||||    
T  26752477 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgtccccacgagtactgtgttaatctcaatttagcaataacgttaatatcta 26752570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 34832131 - 34832025
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaac--tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||| |||| ||||||||||||||   |||||||||||||||| ||  ||||  |||| |||||||||||| |||||| |||| | |||||| ||    
T  34832131 tgatagatactttagcaagtgtactaaaaacgtatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaa 34832033  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  34832032 tatttagg 34832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 14616443 - 14616493
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| || ||||||||||||||||| |||||| |||||||||||||||||    
T  14616443 caagtgaaccaaaactatcgaagtaat-aaataaattcgtatccacgaggac 14616493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 33921445 - 33921395
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  33921445 caagtgtaccaaaactatcgaagtagtaata-aagttcgtatccacgaggac 33921395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 41306293 - 41306397
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||| |||||| |||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| || |||    
T  41306293 tgatagattttttagcaagtgcactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaat 41306390  T
Q  263 atctagg 269  Q
    || ||||    
T  41306391 atttagg 41306397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 18765527 - 18765577
Alignment:
Q  194 tatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctca 243  Q
    |||||||||||||||  |||||||||||| ||||||||||||||| |||||    
T  18765527 tatcgaagtaataaatctaagttcgtatctacgaggactgtgttaatctca 18765577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7649955 - 7650006
Alignment:
Q  178 acaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  7649955 acaagtgaaccaaaactatcgaagtaat-aaataaattcgtattcacgaggac 7650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 31864072 - 31863967
Alignment:
Q  164 tgatagatattttaa-caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||||||| | ||||||||||||| ||||| |||||| |||||  |  ||||  |||||||||||| |||| |||||| |||||| |||||| ||    
T  31864072 tgatagatatttttagcaagtgtactaaatactattgaagtagtaaaaata--tcgttcccacgaggactgagttaatctcaatttagcaataaagtaaa 31863975  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  31863974 tatttagg 31863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 2784469 - 2784364
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||    
T  2784469 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagta 2784370  T
Q  264 tctagg 269  Q
    ||||||    
T  2784369 tctagg 2784364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 18883575 - 18883470
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  18883575 tgatagatattttagcaagtgtactaaaactatcaaagtagtaaaataagttcgtattcacgaggactgtgttaatctcaacttagcaataaagttaata 18883476  T
Q  264 tctagg 269  Q
    ||||||    
T  18883475 tctagg 18883470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 2279394 - 2279490
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  2279394 ttttatcaagtatactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 2279490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 10960254 - 10960145
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaa----taagttcgtatccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10960254 tgatagatattttagcaagcgtactaaaactatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtt 10960155  T
Q  260 aatatctagg 269  Q
    ||||||||||    
T  10960154 aatatctagg 10960145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 10963761 - 10963652
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaa----taagttcgtatccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10963761 tgatagatattttagcaagcgtactaaaactatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtt 10963662  T
Q  260 aatatctagg 269  Q
    ||||||||||    
T  10963661 aatatctagg 10963652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 42354177 - 42354273
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||||||||||    
T  42354177 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgtcaatctcaacttaacaataaagttaatatctagg 42354273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 4250739 - 4250644
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  4250739 ttttagcaagtgtactaaaactatcgaagtaataaaataaattcgta-ccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 4250644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 25888246 - 25888340
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  25888246 ttttagcaagtatactaaaactatcgaagtaataaaataagttcgtatcgacgaggactgtgttaatctcaacttagcaataaaattaatatcta 25888340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 20728385 - 20728493
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||| |    
T  20728385 atgatagatattttaacaagtgtactaaaaatgaatcgaagtaataaaataagttcgtatccatgaggactgtgttaatctcaatttagcaataaagtga 20728484  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  20728485 atatttagg 20728493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 54735978 - 54736074
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  54735978 ttttagcaagtgtattaaaattatcgaagttataaaataagttcgtatccacgaggattgtgttaatctcaacttagcaataaagttaatatctagg 54736074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 30157811 - 30157902
Alignment:
Q  179 caagtgtactaa-aactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  30157811 caagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 30157902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 10967251 - 10967161
Alignment:
Q  183 tgtactaaaactatcgaagtaataaaa----taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  10967251 tgtactaaaactatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 10967161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 3306199 - 3306108
Alignment:
Q  179 caagtgtactaa-aactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  3306199 caagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgtgttaatctcaacctagcaataaagttaatatctagg 3306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 10885309 - 10885206
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||||||||| |||||||||||||| |  ||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||| |    
T  10885309 atgatagatattttagcaagtgtactaaaaatgcatcaaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataaagtaa 10885210  T
Q  261 atat 264  Q
    ||||    
T  10885209 atat 10885206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 52200359 - 52200257
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| ||    
T  52200359 tgatagatattttagcaagtgtattaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaa 52200260  T
Q  262 tat 264  Q
    |||    
T  52200259 tat 52200257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 10902393 - 10902286
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||| | ||||| |||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||    
T  10902393 tgatagcttttttagcaagtgtactaaaaatgtatctaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaa 10902294  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  10902293 tatttagg 10902286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 31549610 - 31549530
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||| ||||| ||||    
T  31549610 aaaactatcgaagtaataaaataagttcgtatccacgatgactgtgttaatctcaatttagcaataaagtaaatatttagg 31549530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 10881933 - 10881826
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||  ||||| || ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| ||    
T  10881933 tgatagaatttttagcatgtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaa 10881834  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  10881833 tatttagg 10881826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 44509094 - 44509023
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgt 235  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  44509094 tgataaatattttagtaagtgtactaaaactatcgaagtaataaaataagtttgtatccacgagggctgtgt 44509023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 28007829 - 28007927
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||  |  |||||||| |||||||||||||||||||||||||||| ||||| |||||| |||||| |||||| ||||| ||||    
T  28007829 ttttagcaagtgtactaaatatgcatcgaagtgataaaataagttcgtatccacgaggactatgttaatctcaatttagcaataaagtaaatatttagg 28007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 32287075 - 32287175
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||||||||||||||||||||||||||||||||||    ||||||| |||||||   | ||||||||| |||||| |||||| ||| ||||||||||||    
T  32287075 ttttaacaagtgtactaaaactatcgaagtaataaaatttataagtttgtatccataggaactgtgttaatctcaatttagcaataaggttaatatctag 32287174  T
Q  269 g 269  Q
    |    
T  32287175 g 32287175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 52309382 - 52309480
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||  ||||| | |||| |||||| |||||| ||||| ||||    
T  52309382 ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggacaatgttaatttcaatttagcaataaagtaaatatttagg 52309480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 55034677 - 55034775
Alignment:
Q  169 gatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatc 265  Q
    ||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||| || ||| ||||| | |||| |||||| |||||| ||||||    
T  55034677 gatattttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacaagaactatgttaatttcaatttagcaataaagtaaatatc 55034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 22993450 - 22993532
Alignment:
Q  164 tgatagatattttaacaagtgtact-aaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||  |||||| ||||||    
T  22993450 tgatagatattttagcaagtgtactaaaaactatcgaagtaataaaataaagttcgtttccacgaggatcgtgttaatctcaa 22993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 47051925 - 47051833
Alignment:
Q  179 caagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||| |||  |||||||||||    
T  47051925 caagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactatgttaatctcaatttagcaataacattaatatctag 47051833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 16244317 - 16244219
Alignment:
Q  173 ttttaacaagtgtactaaaacta--tcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| ||  |||||||||||||||||||| |||| ||||||||| |||||| |||||| |||| | |||||| ||||| ||||    
T  16244317 ttttagcaagtgtactaaaaatacatcgaagtaataaaataagtttgtatacacgaggaccgtgttaatctcaatttagtaataaagtaaatatttagg 16244219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 18542986 - 18542915
Alignment:
Q  174 tttaacaagtgtactaaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||||| |||||| ||||||    
T  18542986 tttaacaagtgtactaaaactatcgaattaataaaatcaagttcgtttccatgaggaccgtgttaatctcaa 18542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 35412946 - 35412842
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| |||||| |||    
T  35412946 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaat 35412849  T
Q  263 atctagg 269  Q
    || ||||    
T  35412848 atttagg 35412842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 281948 - 282036
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    |||||||||||| |||| ||||| |||  |||||||||||||||   |||||||||||||| ||||||||||||| |||||| ||||||    
T  281948 tgatagatatttaaacaggtgtattaattctatcgaagtaataattctaagttcgtatccaagaggactgtgttaatctcaaattagca 282036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 24206784 - 24206852
Alignment:
Q  95 gctcctatccacaacagtacttctgttcgcgatgacagtggccagtgggtgccacttctggatggtgga 163  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||||||||   ||||||| |||||||    
T  24206784 gctcctattcacaacggtacttctgtccgcgatgacagtggccagtgggtggtgcttctggctggtgga 24206852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 41977453 - 41977347
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||| ||||| |||||||| ||||| |  ||||||||||||||||||||| ||||| ||||||||||||||| ||| || |||||| |||| | ||    
T  41977453 tgatagat-ttttagcaagtgtattaaaaatgtatcgaagtaataaaataagtttgtatctacgaggactgtgttaatcttaatttagcaataaaataaa 41977355  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  41977354 tatttagg 41977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 47055338 - 47055262
Alignment:
Q  194 tatcgaagtaataaaataag-ttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| || |||||||||||||||| ||||||| |||||| |||| | ||| |||||||||||||    
T  47055338 tatcgaagtaataaaattaggttcgtatccacgaggattgtgttaatctcaatttagaaataacgttaatatctagg 47055262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 539267 - 539163
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  539267 tgatagatattttagcaagtatactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 539170  T
Q  263 atctagg 269  Q
    || ||||    
T  539169 atttagg 539163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 2874005 - 2873901
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| ||| || |||||| ||| ||||||    
T  2874005 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatcttaatttagcaataatgttaat 2873908  T
Q  263 atctagg 269  Q
    || ||||    
T  2873907 atttagg 2873901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 19304453 - 19304519
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgtta 237  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||| |||||    
T  19304453 ttttagcaagtgtactaaaattgcatcgaagtaataaaataagtttgtatccacgaggactctgtta 19304519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 50461302 - 50461405
Alignment:
Q  163 atgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||    
T  50461302 atgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaa 50461399  T
Q  262 tatcta 267  Q
    ||||||    
T  50461400 tatcta 50461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 54461421 - 54461347
Alignment:
Q  195 atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||||||||||| |||| || ||| ||| |||||| |||||| |||||| ||||| ||||    
T  54461421 atcgaagtaataaaataagttcgtatctacgaagaatgtattaatctcaatttagcaataaagtaaatatttagg 54461347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 55031856 - 55031898
Alignment:
Q  195 atcgaagtaataaaataagttcgtatccacgaggactgtgtta 237  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  55031856 atcgaagtaataaaataagttcgtatccacgaggacagtgtta 55031898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 7487014 - 7486908
Alignment:
Q  163 atgatagatattttaa-caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||||  |  ||||  |||| |||||||||||| |||||| |||||| ||| ||||    
T  7487014 atgatagatatttttagcaagtgtactaaatactatcgaagtaataaaaata--tcgttcccacaaggactgtgttaatctcaatttagcaataaggtta 7486917  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  7486916 atatttagg 7486908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 43809996 - 43809921
Alignment:
Q  194 tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||| |||||||||||||||| |||| ||||||||||| | | || |||||| |||||| ||||| ||||    
T  43809996 tatcgaagtagtaaaataagttcgtattcacggggactgtgttaattttaatttagcaataaagtaaatatttagg 43809921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 6434527 - 6434629
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagt-tcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||| ||||| |||||| |||||| |||||||||||||||| | || | ||||  ||||||||||||||||| |||||| ||| || ||| |||||    
T  6434527 tgatagattttttagcaagtgcactaaatactatcgaagtaataataaaaatatcgttcccacgaggactgtgttaatctcaatttaacaataaggttaa 6434626  T
Q  262 tat 264  Q
    |||    
T  6434627 tat 6434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 16184445 - 16184540
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  |||| |||||||||||||||||| |||||| |||| | |||||| ||||| ||||    
T  16184445 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgtttccacgaggactgtgttaatctcaatttagaaataaagtaaatatttagg 16184540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 24125931 - 24125836
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  24125931 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 24125836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 19301051 - 19301100
Alignment:
Q  195 atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    ||||||||||||||||||||||||||||| ||| | ||||||| ||||||    
T  19301051 atcgaagtaataaaataagttcgtatccatgagcattgtgttaatctcaa 19301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 30691177 - 30691072
Alignment:
Q  164 tgatagata-ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||| ||||| |||||| |||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||    
T  30691177 tgatagataattttagcaagtgcactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaa 30691080  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  30691079 tatttagg 30691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 12541053 - 12541157
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||||| || ||||||||||||| ||||| |||||| |||||  |  ||||  ||| ||||||||||||| |||||| |||||| ||| ||||||    
T  12541053 tgatagatattgtagcaagtgtactaaatactattgaagtagtaaaaata--tcgttcccatgaggactgtgttaatctcaatttagcaataaggttaat 12541150  T
Q  263 atctagg 269  Q
    || ||||    
T  12541151 atttagg 12541157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 31857979 - 31857916
Alignment:
Q  201 gtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    |||||||||||||||  |||||||| ||| ||||||| |||||| |||||| |||||| |||||    
T  31857979 gtaataaaataagttattatccacgcggattgtgttaatctcaatttagcaataaagtaaatat 31857916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 54724178 - 54724078
Alignment:
Q  168 agatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatct 266  Q
    |||||||||| ||||||||||||| | |||||||||| |||||  |  ||||  |||||||||| |||||| | |||| |||||| |||||||||||| |    
T  54724178 agatattttagcaagtgtactaaatattatcgaagtagtaaaaata--tcgttcccacgaggaccgtgttaatttcaatttagcaataaagttaatattt 54724081  T
Q  267 agg 269  Q
    |||    
T  54724080 agg 54724078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 6922952 - 6922857
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||| ||||||| |||||||||||| |||||  |  ||||  |||||| |||||||||| |||||| |||||| |||||||||||| ||||    
T  6922952 ttttagcaagtatactaaatactatcgaagtagtaaaaata--tcgttcccacgaagactgtgttaatctcaatttagcaataaagttaatatttagg 6922857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 18641580 - 18641626
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  18641580 ccacgaggactgtgttaatctcaatttagcaataaggttaatatcta 18641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 18644576 - 18644622
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  18644576 ccacgaggactgtgttaatctcaatttagcaataaggttaatatcta 18644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 3292720 - 3292781
Alignment:
Q  178 acaagtgtact-aaaactatcgaagtaataaa-ataagttcgtatccacgaggactgtgtta 237  Q
    ||||||||||| ||||||||||||||| |||| | ||| | |||||||||||||||||||||    
T  3292720 acaagtgtactgaaaactatcgaagtagtaaagaaaagattgtatccacgaggactgtgtta 3292781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 2775920 - 2775831
Alignment:
Q  179 caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||| ||||||||||||||||||  |  ||||  |||| |||||||||||| |||||| |||| | |||||| ||||| ||||    
T  2775920 caagtgtactaaatactatcgaagtaataaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttagg 2775831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 2779162 - 2779073
Alignment:
Q  179 caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||| ||||||||||||||||||  |  ||||  |||| |||||||||||| |||||| |||| | |||||| ||||| ||||    
T  2779162 caagtgtactaaatactatcgaagtaataaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttagg 2779073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 14188521 - 14188416
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  14188521 tgataaatattttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgcgttaatctcaacttagcaataaagttaata 14188422  T
Q  264 tctagg 269  Q
    ||||||    
T  14188421 tctagg 14188416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 20262905 - 20262800
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  20262905 tgatagatattttaacaagtgtactaaaactatcgaagtaatacagtaagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaata 20262806  T
Q  264 tctagg 269  Q
    ||||||    
T  20262805 tctagg 20262800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 21049535 - 21049430
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  21049535 tgatagatattttaacaagtgtactaaaactatcgaagtaatacagtaagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaata 21049436  T
Q  264 tctagg 269  Q
    ||||||    
T  21049435 tctagg 21049430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 31986628 - 31986532
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  31986628 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 31986532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 30645835 - 30645730
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  30645835 tgataaatattttagcaagtgtactaaaattatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtaaata 30645736  T
Q  264 tctagg 269  Q
    | ||||    
T  30645735 tatagg 30645730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 31981701 - 31981605
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||||||||    
T  31981701 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctagg 31981605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 18695743 - 18695848
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  18695743 atgatagat-ttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaat 18695841  T
Q  263 atctagg 269  Q
    |||||||    
T  18695842 atctagg 18695848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 5964590 - 5964501
Alignment:
Q  180 aagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  5964590 aagtgtattaaaactatcgaagtaataaaataagttcgtatccatgaggactgtgttaatctcaacttagcaataaagttaatatctagg 5964501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 23644174 - 23644069
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||  ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| | |||||| ||||    
T  23644174 tgatagactttttagcaagtgaactaaaactatcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagaaataaagtaaata 23644075  T
Q  264 tctagg 269  Q
    | ||||    
T  23644074 tttagg 23644069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 14422098 - 14421991
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| ||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | |||||| ||    
T  14422098 tgatagatattttagcaaatgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagtaataaagtaaa 14421999  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  14421998 tatttagg 14421991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 4868596 - 4868499
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| | |||| |||||| |||||||||||| ||||    
T  4868596 ttttaacatgtgtactaaaactatcgaagtaataaaaataagttcgtatcaacgaggaatgtgttaatatcaaattagcaataaagttaatatttagg 4868499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 5980083 - 5980163
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  5980083 aaaactatcgaagtaataacataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 5980163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 14589387 - 14589485
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  14589387 tgatagat-ttttagcaagtgtactaaaattatcgaagtaataaaattaagttcgtattcacgaggactgtgttaatctcaatttagcaataatgttaat 14589485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 45155031 - 45155140
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  |||| |||||| |||||| |||||| ||| |||    
T  45155031 tgatagactttttagcaagtgtactaaaactatcgaagtaataaaatttataagttcgtatccacagggaccgtgttaatctcaatttagcaataaggtt 45155130  T
Q  260 aatatctagg 269  Q
    ||||||||||    
T  45155131 aatatctagg 45155140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 5538534 - 5538641
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| | |||| |||| | |||||| |    
T  5538534 atgatagat-ttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccatgaggactgtgttaatttcaatttagaaataaagtaa 5538632  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  5538633 atatttagg 5538641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 12583367 - 12583269
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||| |||||||||||||| ||||||||||||||| ||||| |||||| |||||| |||||| ||||| ||||    
T  12583367 ttttagcaagtgtactaaaaatgtatcgaaataataaaataagtttgtatccacgaggactatgttaatctcaatttagcaataaagtaaatatttagg 12583269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 36710408 - 36710508
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctag 268  Q
    ||||| |||||||||||| |||||| ||||||||||    ||||||||||||||||  ||||||||||| |||||| |||||| |||| |||||||||||    
T  36710408 ttttagcaagtgtactaagactatcaaagtaataaagtttataagttcgtatccacagggactgtgttaatctcaatttagcaataaatttaatatctag 36710507  T
Q  269 g 269  Q
    |    
T  36710508 g 36710508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 33883122 - 33883203
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    ||||| |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  33883122 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagca 33883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 25231429 - 25231331
Alignment:
Q  174 tttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||| ||||||||||||||||||||||||||||||    |||||||||||||||| | |||||||||| |||||| |||||| |||  ||||||| ||||    
T  25231429 tttagcaagtgtactaaaactatcgaagtaataaattttataagttcgtatccac-aagactgtgttaatctcaatttagcaataagtttaatatttagg 25231331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 10664303 - 10664200
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  10664303 tgatagat-ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 10664207  T
Q  263 atctagg 269  Q
    || ||||    
T  10664206 atttagg 10664200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 18825655 - 18825759
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  18825655 tgatagattttttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 18825752  T
Q  263 atctagg 269  Q
    |||||||    
T  18825753 atctagg 18825759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 22173715 - 22173803
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||| ||||||||||||||| |||||| |  |||| ||||||||||| |||||| |||||| |||| | |||||| ||||| ||||    
T  22173715 caagtgtaccaaaactatcgaagtagtaaaatta--tcgtttccacgaggacagtgttaatctcaatttagaaataaagtaaatatttagg 22173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 41836233 - 41836291
Alignment:
Q  194 tatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||| |||||| ||||||    
T  41836233 tatcgaaataataaaaataagttcgtatccatgaggactgtgttaatctcaatttagca 41836291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 18824218 - 18824266
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  18824218 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 18824266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 37681291 - 37681392
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaa----ataagttcgtatccac-gaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| |||||||||||| | |||||||||||||||    ||||||| |||||||| | ||||||||||| |||||| ||| || ||| |||| ||||||    
T  37681291 ttttagcaagtgtactaataatatcgaagtaataaaatttataagtttgtatccacaggggactgtgttaatctcaatttaacaataaggttactatcta 37681390  T
Q  268 gg 269  Q
    ||    
T  37681391 gg 37681392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 23597560 - 23597456
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||| |||||||| ||||| ||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||| | |||||| |||    
T  23597560 tgataaatattttagcaagtatactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagaaataaagtaaat 23597463  T
Q  263 atctagg 269  Q
    || ||||    
T  23597462 atttagg 23597456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 18721109 - 18721157
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  18721109 ccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 18721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 13518643 - 13518547
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  13518643 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 13518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 1503198 - 1503295
Alignment:
Q  172 attttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1503198 attttagcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 1503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 1506402 - 1506499
Alignment:
Q  172 attttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1506402 attttagcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 1506499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 11060148 - 11060043
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  11060148 tgataaatattttagcaaatgtactaaaactatcgaagtaataaaataagttcgtatccacgagaactgtgttaatctcaacttagcaataaagttaata 11060049  T
Q  264 tctagg 269  Q
    ||||||    
T  11060048 tctagg 11060043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 15719042 - 15719147
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  15719042 atgatagat-ttttaccaagtgtactaaaactatggaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttggcaataaagttaat 15719140  T
Q  263 atctagg 269  Q
    |||||||    
T  15719141 atctagg 15719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 15703738 - 15703843
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  15703738 atgatagat-ttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaat 15703836  T
Q  263 atctagg 269  Q
    |||||||    
T  15703837 atctagg 15703843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 25820608 - 25820715
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| ||    
T  25820608 tgatagatattttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaa 25820707  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  25820708 tatttagg 25820715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 43724042 - 43723943
Alignment:
Q  172 attttaacaagtgtactaaaactat--cgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  43724042 attttagcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 43723943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 25138692 - 25138793
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactat--cgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||| | ||||||| |||||| |||||| |||||| ||    
T  25138692 tgatagatattttagcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgagaaatgtgttaatctcaatttagcaataaagtaaa 25138791  T
Q  262 ta 263  Q
    ||    
T  25138792 ta 25138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 45457502 - 45457395
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||| ||||| |||||||||||||  |  |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  45457502 tgatagat-ttttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgtta 45457404  T
Q  261 atatctagg 269  Q
    |||||||||    
T  45457403 atatctagg 45457395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 13137238 - 13137136
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||| ||||| |||||||||||||| |  |||||| |||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||| |    
T  13137238 atgatagat-ttttagcaagtgtactaaaaatgcatcgaaataataaaataagttcgtatccacgaggactgtcttaatctcaatttagcaataaagtaa 13137140  T
Q  261 atat 264  Q
    ||||    
T  13137139 atat 13137136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 26366264 - 26366157
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    ||||||||| ||||  ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |  ||| |||||| ||    
T  26366264 tgatagatactttagtaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaattcggcaataaagtaaa 26366165  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  26366164 tatttagg 26366157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 6827112 - 6827014
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  6827112 ttttagcaagtgtactaaaattgcatcaaagtaataaaataagttcatatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 6827014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 13971675 - 13971773
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||| |||||| ||||| ||||    
T  13971675 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttggtatccacgaggactttgttaatctcaatttagcaataaagtgaatatttagg 13971773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 15470776 - 15470701
Alignment:
Q  194 tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||| |||||||| ||||    
T  15470776 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaggttaatatttagg 15470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 36808208 - 36808315
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactat--cgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||| ||||| |||||||| | |||||||  |||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||| ||| ||||    
T  36808208 tgatagat-ttttagcaagtgtatttaaactatatcgaagtaataaaattaagttcgtatccacgaggactgtattaatctcaatttagcaataaggtta 36808306  T
Q  261 atatctagg 269  Q
    |||||||||    
T  36808307 atatctagg 36808315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 31427314 - 31427413
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||| ||| |||||||| ||||    
T  31427314 ttttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaagactgtgttaatctcaatttagcaataaggttaatatttagg 31427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 45454206 - 45454107
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||  |  |||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  45454206 ttttagcaagtgtactaaatatgcatcgaagtaataaaattaagtttgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 45454107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 34683027 - 34682930
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||  |||| ||| |||||||| |||||||||||||||||||||| || || |||||| |||||| ||  |||||||||||||    
T  34683027 ttttaacaagtgtactaattctatagaaataataaaaataagttcgtatccacgaggactatggtaatctcaatttagcaatagtgttaatatctagg 34682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 8888973 - 8888869
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  8888973 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 8888876  T
Q  263 atctagg 269  Q
    || ||||    
T  8888875 atttagg 8888869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 3252658 - 3252565
Alignment:
Q  174 tttaacaagtgtactaaaa-ctatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||| |||||||||||||| |||||||||||||||||    || || |||||||| ||||||||| ||||||| ||||| |||||||||||||||||    
T  3252658 tttagcaagtgtactaaaaactatcgaagtaataaaaa---tttgtttccacgagaactgtgttaatctcaacatagcaataaagttaatatctagg 3252565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 5666835 - 5666771
Alignment:
Q  194 tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagt 258  Q
    |||||||||||||||||||||||||||| |||||||||| |||  |||||| |||||| ||||||    
T  5666835 tatcgaagtaataaaataagttcgtatctacgaggactgcgttgatctcaatttagcaataaagt 5666771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 33311003 - 33310899
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  33311003 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 33310906  T
Q  263 atctagg 269  Q
    |||||||    
T  33310905 atctagg 33310899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 38460590 - 38460664
Alignment:
Q  173 ttttaacaagtgtactaaaacta--tcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaac 245  Q
    ||||| |||||||||||||| ||  |||||||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  38460590 ttttagcaagtgtactaaaaatacatcgaagtagtaaaataagtttgtatctacgaggactgtgttaatctcaac 38460664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 29440817 - 29440728
Alignment:
Q  179 caagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||| |||||||||||| |||||  |  |||| |||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  29440817 caagtgtactaaatactatcgaagtagtaaaaata--tcgtttccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 29440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 261
Target Start/End: Original strand, 25959457 - 25959553
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||  ||  ||||  |||||| |||||||||| |||||| |||||| ||| |||||    
T  25959457 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaa--aatatcgttcccacgatgactgtgttaatctcaatttagcaataaggttaa 25959553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 30274536 - 30274640
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||| ||||||||||||| |||||| |||||| ||| || |||    
T  30274536 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccatgaggactgtgttaatctcaatttagcaataacgtaaat 30274633  T
Q  263 atctagg 269  Q
    || ||||    
T  30274634 atatagg 30274640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 45499135 - 45499230
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||||| ||||    
T  45499135 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttagg 45499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 11347662 - 11347748
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    |||||||||||||| ||||||||||||| |||||| ||||| |||||  |  ||||  ||||||||||||||||| |||||| ||||||    
T  11347662 tgatagatattttagcaagtgtactaaatactatcaaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagca 11347748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 13137320 - 13137257
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacg 225  Q
    ||||||||| ||||| |||||||||||||| |  |||||| ||||||||||||||||||||||||    
T  13137320 atgatagat-ttttagcaagtgtactaaaaatgcatcgaaataataaaataagttcgtatccacg 13137257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 25874516 - 25874414
Alignment:
Q  166 atagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    ||||||| |||| ||||||||||||| |||||||||||| |||||  | |  ||  ||||||||||||||||| |||||| |||||| ||| ||||||||    
T  25874516 atagataatttagcaagtgtactaaatactatcgaagtagtaaaaatatt--gttcccacgaggactgtgttaatctcaatttagcaataaggttaatat 25874419  T
Q  265 ctagg 269  Q
     ||||    
T  25874418 ttagg 25874414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 30926892 - 30926844
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataa 212  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  30926892 atgatagat-ttttagcaagtgtattaaaactatcgaagtaataaaataa 30926844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 24238700 - 24238611
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| |||||||    
T  24238700 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaata 24238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 38015799 - 38015751
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  38015799 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 38015751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 23673359 - 23673409
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| || ||||||||||||||||| |||||| |||||||||||||||||    
T  23673359 caagtgaaccaaaactatcgaagtaat-aaataaattcgtatccacgaggac 23673409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 24384939 - 24384994
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgt 233  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  24384939 caagtgtaccaaaactatcgaagtaataaaattaaattcgtattcacgatgactgt 24384994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 36327157 - 36327107
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| || ||||||||||||||||| |||||| |||||||||||||||||    
T  36327157 caagtgaaccaaaactatcgaagtaat-aaataaattcgtatccacgaggac 36327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 39023058 - 39023099
Alignment:
Q  165 gatagatattttaacaagtgtactaaaactatcgaagtaataa 207  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  39023058 gatagatattt-aacaagtgtattaaaactatcgaagtaataa 39023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 29436088 - 29436048
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  29436088 aaaactatcgaagtaataata-aagttcgtatccacgaggac 29436048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 40781822 - 40781715
Alignment:
Q  164 tgatagatattttaa-caagtgtactaaaac--tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||||||| | ||||||||||||||   |||||||||||||||| ||  ||||  |||| |||||||||||| |||||| |||| | |||||| |    
T  40781822 tgatagatatttttagcaagtgtactaaaaacgtatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaa 40781724  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  40781723 atatttagg 40781715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 40937372 - 40937310
Alignment:
Q  174 tttaacaagtgtactaaaa-ctatcgaagtaataaaataagttcgtatccacgaggactgtgtta 237  Q
    |||| ||| |||||||||| ||||||||||||||||||  |||| ||||||||||||||| ||||    
T  40937372 tttagcaaatgtactaaaagctatcgaagtaataaaat--gttcatatccacgaggactgcgtta 40937310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 9185248 - 9185296
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| | |||| |||||||||||| ||||    
T  9185248 ccacgaggactgtgttaatctcaattcagcaataaagttaatatttagg 9185296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 37279500 - 37279548
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| |||||| | |||| |||||||||||| ||||    
T  37279500 ccacgaggactgtgttaatctcaattcagcaataaagttaatatttagg 37279548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 42368465 - 42368513
Alignment:
Q  163 atgatagatattttaa-caagtgtactaaa-actatcgaagtaataaaa 209  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  42368465 atgatagatatttttagcaagtgtactaaatactatcgaagtaataaaa 42368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 43207651 - 43207698
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaa--ctatcgaagtaataaaa 209  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||    
T  43207651 tgatagatattttagcaagtgtactaaaaacgtatcgaagtaataaaa 43207698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 7108 - 7214
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  7108 tgatagatattttagcaagtgtactaaaactatcgaagtaataaaaataagttcgtatccacgaggacggtgttaatctcaacttagcaataaagttaat 7207  T
Q  263 atctagg 269  Q
    |||||||    
T  7208 atctagg 7214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 82; Significance: 9e-39; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 13967 - 13862
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  13967 tgatagatattttagcaagtgtacaagaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatt 13868  T
Q  264 tctagg 269  Q
    ||||||    
T  13867 tctagg 13862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 20417 - 20312
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||     
T  20417 tgatagatattttagcaagtgtactaaaactaccgaagtaataaaataagttcatatccacgaggactgtgttaatctcaacttagcaataaagttaatt 20318  T
Q  264 tctagg 269  Q
    ||||||    
T  20317 tctagg 20312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 27983 - 27878
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  27983 tgatagatattttagcaagtgtacaagaactatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatt 27884  T
Q  264 tctagg 269  Q
    ||||||    
T  27883 tctagg 27878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 228986 - 228890
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  228986 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 228890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 224060 - 223964
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||||||||    
T  224060 ttttagcaagtgtactaaaactatcgaagtaataaaataagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctagg 223964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 67599 - 67704
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  67599 atgatagat-ttttaccaagtgtactaaaactatggaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttggcaataaagttaat 67697  T
Q  263 atctagg 269  Q
    |||||||    
T  67698 atctagg 67704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 52650 - 52755
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  52650 atgatagat-ttttagcaagtgcactaaaactatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaat 52748  T
Q  263 atctagg 269  Q
    |||||||    
T  52749 atctagg 52755  T

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Target: scaffold0360 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 6626 - 6530
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6626 ttttaccaagtgtactaaaaatatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 6530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 2794 - 2698
Alignment:
Q  173 ttttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  2794 ttttaccaagtgtacttaaaatatcgaagtaataaaataagttcgtatccacaaggactgtgttaatctcaacttagcaataaagttaatatctagg 2698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 198513 - 198405
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||||||||||||| |||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| |    
T  198513 atgatagatattttagcaagtgtactaaaaatgcatcaaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaa 198414  T
Q  261 atatctagg 269  Q
    |||| ||||    
T  198413 atatttagg 198405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 118214 - 118319
Alignment:
Q  166 atagatattttaacaagtgtactaaaa-ctatcgaagtaataaaa-taagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaata 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||| | | || |||||||| ||    
T  118214 atagatattttaacaagtgtactaaaaactatcgaagtaataaaaataagttcgtatccacgaggattgtgttaatctcaattcaacaataaagttatta 118313  T
Q  264 tctagg 269  Q
    ||||||    
T  118314 tctagg 118319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 99007 - 99103
Alignment:
Q  173 ttttaacaagtgtactaaaact-atcgaagtaat-aaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    ||||| |||||||||||||| | ||||||||||| ||||||| |||||||| |||||||  |||||| |||||| |||||| |||||||| ||||||    
T  99007 ttttagcaagtgtactaaaaattatcgaagtaataaaaataatttcgtatctacgaggatggtgttaatctcaatttagcaataaagttattatcta 99103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 1690 - 1791
Alignment:
Q  172 attttaacaagtgtactaaaactatcgaagtaataaaat----aagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    |||||| ||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||| |||||| |||||| ||| |||||||||||    
T  1690 attttagcaagtgtactaaaactatcgaagtaataaaatttataagttcgtatccacaaggactgtgttaatctcaatttagcaataaggttaatatcta 1789  T
Q  268 gg 269  Q
    ||    
T  1790 gg 1791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 2405879 - 2405772
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaa 261  Q
    |||||||  ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||    
T  2405879 tgatagaatttttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaa 2405780  T
Q  262 tatctagg 269  Q
    ||| ||||    
T  2405779 tatttagg 2405772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 21110921 - 21111019
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  21110921 ttttagcaagtgtactaaaaatgcatcgaagtaataaaatatgttcgtatccacgaggactgtgttactctcaatttagcaataaagtaaatatttagg 21111019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 29642994 - 29643083
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    ||||| |||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  29642994 ttttagcaagtgtactaaaaatgcattgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtta 29643083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 21018230 - 21018323
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    |||||||| ||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| || |||||| |||||    
T  21018230 ttttaacaggtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaacctcaatttaacaataaagtaaatat 21018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 41058095 - 41058163
Alignment:
Q  201 gtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  41058095 gtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 41058163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 42022962 - 42022891
Alignment:
Q  198 gaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||| ||||| ||||    
T  42022962 gaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttaacaataaagtaaatatttagg 42022891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 49852900 - 49852999
Alignment:
Q  172 attttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||| |||||||||||||| |  ||||||||||||||||||||||| || || ||||| ||||||| |||||| |||||| |||||| ||||| ||||    
T  49852900 attttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgcattcatgaggattgtgttaatctcaatttagcaataaagtaaatatttagg 49852999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 28111413 - 28111309
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  28111413 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 28111316  T
Q  263 atctagg 269  Q
    || ||||    
T  28111315 atttagg 28111309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 2794584 - 2794480
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||| ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  2794584 tgatagatcttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaat 2794487  T
Q  263 atctagg 269  Q
    || ||||    
T  2794486 atttagg 2794480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 27536298 - 27536402
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||  ||  ||||   |||||||||||||||| |||||| |||||| ||| ||||||    
T  27536298 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaa--aatatcgttcacacgaggactgtgttaatctcaatttagcaataaggttaat 27536395  T
Q  263 atctagg 269  Q
    || ||||    
T  27536396 atttagg 27536402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 50196740 - 50196820
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgt-gttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||| |||||||||| | || || |||||||||||||| || |||| ||||||||||||| |||||||||||||||||    
T  50196740 aaaactattgaagtaataataaaattt-gtatccacgaggaccgttgttaatctcaacttagcaataaagttaatatctagg 50196820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 45960512 - 45960616
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    ||||||| |||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  45960512 tgatagaaattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgttaat 45960609  T
Q  263 atctagg 269  Q
    |||||||    
T  45960610 atctagg 45960616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 34552438 - 34552502
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||||||||| | ||||||||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  34552438 tgatagatatttga-caagtgtaccaaaactatcgaagtagtaata-aagttcgtatccacgaggac 34552502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 1950222 - 1950312
Alignment:
Q  173 ttttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    ||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| |||||| |||||    
T  1950222 ttttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatat 1950312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 27331550 - 27331619
Alignment:
Q  174 tttaacaagtgtactaaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttattctc 242  Q
    |||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||||| |||||| ||||    
T  27331550 tttagcaagtgtcctaaaactatcgaagtaatataataaagttcatttccacgaggaccgtgttaatctc 27331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 37183686 - 37183735
Alignment:
Q  220 tccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  37183686 tccacgaggactgtgttaatctcaatttagcaataatgttaatatctagg 37183735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 13496219 - 13496168
Alignment:
Q  178 acaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||| || ||||||||||||||||| |||||| |||||||||||||||||    
T  13496219 acaagtgaaccaaaactatcgaagtaat-aaataaattcgtatccacgaggac 13496168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 16190203 - 16190246
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggactgt 233  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  16190203 aaaactatcgaagtaataaa-taaattcgtatccacgaggactgt 16190246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 20399154 - 20399106
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||| ||||||||| |||||| |||||| |||||||||||||||||    
T  20399154 ccacgagaactgtgttaatctcaatttagcaataaagttaatatctagg 20399106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 20448189 - 20448096
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagt 258  Q
    ||||||||| |||| ||||||||||||| |||||||||||| |||||  |  ||||  |||| |||||||||||| |||||| |||||| ||||||    
T  20448189 tgatagatactttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacaaggactgtgttaatctcaatttagcaataaagt 20448096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 20533956 - 20533863
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagt 258  Q
    ||||||||| |||| ||||||||||||| |||||||||||| |||||  |  ||||  |||| |||||||||||| |||||| |||||| ||||||    
T  20533956 tgatagatactttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacaaggactgtgttaatctcaatttagcaataaagt 20533863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 6070725 - 6070829
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaac-tatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||  ||  ||||  |||| |||| ||||||| |||||| |||| | |||||| |||    
T  6070725 tgatagatattttagcaagtgtaataaaacgtatcgaagtaataaa--aacatcgttcccacaaggattgtgttaatctcaatttagaaataaagtaaat 6070822  T
Q  263 atctagg 269  Q
    || ||||    
T  6070823 atttagg 6070829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 23021687 - 23021791
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||  ||  ||||  ||| ||||||| ||||| |||||| |||||| | |||| |||    
T  23021687 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaa--aatatcgttcccatgaggactctgttaatctcaatttagcaatcaagtaaat 23021784  T
Q  263 atctagg 269  Q
    || ||||    
T  23021785 atttagg 23021791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 32505871 - 32505921
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| || ||||||||||||||||| ||||||| ||||||||||||||||    
T  32505871 caagtgaaccaaaactatcgaagtaat-aaataagatcgtatccacgaggac 32505921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 11666759 - 11666827
Alignment:
Q  163 atgatagatattttaacaagtgtactaaaactatcgaagtaataaaat--aagttcgtatccacgaggac 230  Q
    ||||||||| ||||| ||||| ||| ||||||||||||||||||||||  |||||||| ||||| |||||    
T  11666759 atgatagat-ttttagcaagtctaccaaaactatcgaagtaataaaattaaagttcgtttccacaaggac 11666827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 34064942 - 34065031
Alignment:
Q  180 aagtgtactaaaactatcgaagtaataaaataa-gttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||| ||| |||| ||||||||||  || ||||||||||| || || ||||||| ||||||| ||||| |||||||||||| ||||    
T  34064942 aagtgtactgaaattatcaaagtaataaatcaaagttcgtatccatgaagattgtgttaatctcaac-tagcaataaagttaatatttagg 34065031  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 45941779 - 45941679
Alignment:
Q  170 atattttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatcta 267  Q
    |||||||| |||||||||||||| |  ||||||||||||||| ||  ||||  |||| |||||||||||| |||||| |||| | |||||| ||||| ||    
T  45941779 atattttagcaagtgtactaaaaatgtatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatattta 45941681  T
Q  268 gg 269  Q
    ||    
T  45941680 gg 45941679  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 6206236 - 6206184
Alignment:
Q  174 tttaacaagtgtactaaaactatcgaagtaataaaataagttcgtatccacgag 227  Q
    |||| |||||||||||||| |||||||||| ||| | |||||||||||||||||    
T  6206236 tttagcaagtgtactaaaattatcgaagtagtaata-aagttcgtatccacgag 6206184  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 31205194 - 31205092
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||  ||||||||| ||| ||||| |||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||| ||    
T  31205194 tgatagatattttggcaagtgtaccaaatactattgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcaataacgtttat 31205097  T
Q  263 atcta 267  Q
    |||||    
T  31205096 atcta 31205092  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 49716710 - 49716670
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  49716710 aaaactatcgaagtaataata-aagttcgtatccacgaggac 49716670  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 49720192 - 49720152
Alignment:
Q  189 aaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  49720192 aaaactatcgaagtaataata-aagttcgtatccacgaggac 49720152  T

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Target: scaffold1063 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 2846 - 2748
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  2846 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 2748  T

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Target: scaffold0080 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 27470 - 27372
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||    
T  27470 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttagg 27372  T

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Target: scaffold0045 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 90119 - 90021
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||| |||||||||||||    
T  90119 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctagg 90021  T

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Target: scaffold0034 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 48173 - 48272
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaa-ataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||| |||||| ||| ||||||    
T  48173 tgatagatattt-agcaagtgtactaaaactattgaagtaataaatataagttcgtatccacgatgactgtgttaatctcaatttagcaataaggttaat 48271  T

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Target: scaffold0757 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 5711 - 5613
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| | |||||| ||||| ||||    
T  5711 ttttagcaagtgtactaaaactgcatcgaagtaataaaataagttcgtatccacgaggactgttttaatctcaatttagtaataaagtaaatatttagg 5613  T

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Target: scaffold2073 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 627 - 736
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaataaaat----aagttcgtatccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    |||||||  ||||| |||||||||||||||||||||||| |||||||    ||||||||||||||  ||||||||||| |||||| |||||| ||| |||    
T  627 tgatagactttttagcaagtgtactaaaactatcgaagtgataaaatttacaagttcgtatccacagggactgtgttaatctcaatttagcaataaggtt 726  T
Q  260 aatatctagg 269  Q
    ||||||||||    
T  727 aatatctagg 736  T

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Target: scaffold0520 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 1312 - 1410
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||| |||||| ||||| ||||    
T  1312 ttttagcaagtgtactaaaaatgcatcgaagtaataaaataagttcgtgtccacgaggactctgttaatctcaatttagcaataaagtaaatatttagg 1410  T

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Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 248855 - 248786
Alignment:
Q  195 atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatat 264  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||| |||||| |||||| |||||    
T  248855 atcgaagtaataaaataagttcgtgtccacgaggactgtgttgatctcaatttagcaataaagtaaatat 248786  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 92739 - 92701
Alignment:
Q  221 ccacgaggactgtgttattctcaacttagcactaaagtt 259  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  92739 ccacgaggactgtgttattctcaacttggcaataaagtt 92701  T

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Target: scaffold1755 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 464 - 394
Alignment:
Q  199 aagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| |||||| || ||| ||||| ||||    
T  464 aagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaatatagtaaatatttagg 394  T

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Target: scaffold0233 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 10296 - 10209
Alignment:
Q  164 tgatagatattttaacaagtgtactaaaactatcgaagtaat-aaaataagttcgtatccacgaggactgtgttattctcaacttagca 251  Q
    |||||||||||| | ||||||||||||||||||| ||||||| |||||||||| || |||||||||||| | ||| |||||| ||||||    
T  10296 tgatagatattt-agcaagtgtactaaaactatcaaagtaataaaaataagtttgtttccacgaggactctattaatctcaatttagca 10209  T

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Target: scaffold0250 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 19752 - 19648
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||  ||||||||| ||| |||||||||||| |||||  |  ||||  ||||||||||||||||| |||||| |||||| ||| ||||||    
T  19752 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaatttagcagtaacgttaat 19655  T
Q  263 atctagg 269  Q
    || ||||    
T  19654 atttagg 19648  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 293374 - 293270
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaat 262  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||  ||  | ||  ||||||||||||||||| |||||| |||| | |||||| |||    
T  293374 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaa--aatattgttcccacgaggactgtgttaatctcaatttagaaataaagtaaat 293277  T
Q  263 atctagg 269  Q
    || ||||    
T  293276 atttagg 293270  T

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Target: scaffold0962 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 3048 - 3127
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaa 244  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||  |  ||||  ||||||||||||||||| ||||||    
T  3048 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaata--tcgttcccacgaggactgtgttaatctcaa 3127  T

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Target: scaffold0412 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 491 - 383
Alignment:
Q  164 tgatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagtt--cgtatccacgaggactgtgttattctcaacttagcactaaagtta 260  Q
    |||||||||||||  ||||||||| ||| ||||| |||||| ||||| ||  |  |||  ||||||||||||||||| |||||| |||||| ||| ||||    
T  491 tgatagatattttggcaagtgtaccaaatactattgaagtagtaaaaaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataacgtta 392  T
Q  261 atatctagg 269  Q
    |||||||||    
T  391 atatctagg 383  T

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Target: scaffold1809 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 423 - 326
Alignment:
Q  173 ttttaacaagtgtactaaaact--atcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttagcactaaagttaatatctagg 269  Q
    ||||| |||||||||||||| |  |||||| |||||||||||||| |||| ||  || ||||||||| |||||| |||||| |||||| ||||| ||||    
T  423 ttttagcaagtgtactaaaaatgcatcgaaataataaaataagtttgtattca-aagaactgtgttaatctcaatttagcaataaagtaaatatttagg 326  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 2633 - 2683
Alignment:
Q  179 caagtgtactaaaactatcgaagtaataaaataagttcgtatccacgaggac 230  Q
    |||||| || ||||||||||||||||| ||||||| ||||||||||||||||    
T  2633 caagtggaccaaaactatcgaagtaat-aaataagatcgtatccacgaggac 2683  T

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Target: scaffold0427 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 3554 - 3637
Alignment:
Q  165 gatagatattttaacaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttattctcaacttag 249  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||  ||  ||||   |||||||||||||||| |||||| ||||    
T  3554 gatagatattttagcaagtgtactaaatactattgaagtaataaa--aatatcgttctcacgaggactgtgttaatctcaatttag 3637  T

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