View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16626_high_28 (Length: 223)
Name: NF16626_high_28
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16626_high_28 |
 |  |
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| [»] scaffold1643 (1 HSPs) |
 |  |
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| [»] chr3 (19 HSPs) |
 |  |
|
| [»] scaffold0425 (1 HSPs) |
 |  |  |
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Alignment Details
Target: scaffold1643 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 953 - 734
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
953 |
catttacccaacttagtatctcttcaactgttaagctgtggattatgttcccattttccaccacttgggcagcttccttctctcaagaatctttctattt |
854 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
|| | ||||| |||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
853 |
catattgtgatggaataaagatcattggtgaagagattcatgg---cagcaatttaacgcatgttccgttcttgtcccttgaagttttgaaatttgagaa |
757 |
T |
 |
| Q |
201 |
gatgaacaattgggaggaatggt |
223 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
756 |
gttgaacaattgggaggaatggt |
734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6795864 - 6796083
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||||| | || ||||||||||||| ||||| || |||| |||||||| || ||||||||||| ||||| |||| |
|
|
| T |
6795864 |
catttatccaacttagtatctcttcaactgcaagactatggattatgttccgatttgccagcactagggcagctcccctctctcaaggacctttccattt |
6795963 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||| ||| | |||||| | || |||||||||| ||||| ||||||||| ||||||||||||||| | |
|
|
| T |
6795964 |
caagatgtgacggaataatgatcattggtgaagaatttta---caacaatagttcaacaaatgtttcgttcaggtcccttgaggttttgaaatttgagga |
6796060 |
T |
 |
| Q |
201 |
gatgaacaattgggaggaatggt |
223 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
6796061 |
gatggacaattgggaggaatggt |
6796083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8470340 - 8470121
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||| ||||| ||||||||| || | |||||||||| |||| ||||||| |||||||||| ||||| || | ||||||||||||| |||| | |
|
|
| T |
8470340 |
catttaccaaacttagtatctcttaaattacagagctgtggatcatgtctccatttgccaccacttggacagctcccgtgtctcaaggagcttgctatct |
8470241 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
| ||| | ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8470240 |
gtgactgtcatggaataaagataattggtgaagagtttcatggcaacaa---ttcaacaaatgttccgttcttgtcccttgaagttttgaaatttgtgaa |
8470144 |
T |
 |
| Q |
201 |
gatgaacaattgggaggaatggt |
223 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
8470143 |
gatgaacagttgggaggaatggt |
8470121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 6945988 - 6945832
Alignment:
| Q |
64 |
cttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatg |
163 |
Q |
| |
|
||||||||| | || |||||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||| | |||||| | | |||||||| |
|
|
| T |
6945988 |
cttgggcagttcccctctctcaaggagatttctatttcaaactgtaacggaataaagatcatcggcgaagagtttta---caacaatagtacaacaaatg |
6945892 |
T |
 |
| Q |
164 |
ttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggt |
223 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| | ||| ||||||||||||||||| |
|
|
| T |
6945891 |
ttccgttcaggtcccttgaagttttgaaattggagcatatggtcaattgggaggaatggt |
6945832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6481235 - 6481371
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||||||||||||| |||||| ||||||||||||| || || ||||||| |||||||||||||| |
|
|
| T |
6481235 |
catttacccaacttagtatctcttcaaatgcgtcactgtggattatgttctcatttgccaccacttgggcaactcccctctctcagggagctttctattt |
6481334 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtt |
137 |
Q |
| |
|
|||| ||| | ||||||||||||| ||||||||||| |
|
|
| T |
6481335 |
caaactgtaaaagaataaagatcatcggtgaagagtt |
6481371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 5262565 - 5262423
Alignment:
| Q |
2 |
atttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttc |
101 |
Q |
| |
|
|||||| |||||||||||| ||| ||||| || |||||||| ||||||| ||| ||||||||||| ||||||| ||||| || |||||||||||||| |
|
|
| T |
5262565 |
atttactcaacttggtatcccttgaactgaatagatgtggattttgttcccggttgccaccacttgggaagcttccctctcttaaagagctttctatttc |
5262466 |
T |
 |
| Q |
102 |
aaaatgtgacggaataaagatcattggtgaagagtttcatggc |
144 |
Q |
| |
|
| ||||| | |||||| ||||||| |||||||||||| ||||| |
|
|
| T |
5262465 |
agaatgttatggaatagagatcatcggtgaagagttttatggc |
5262423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 8453335 - 8453196
Alignment:
| Q |
81 |
tctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtccctt |
180 |
Q |
| |
|
||||||| ||||||||||||| | ||||| |||||||||||||| |||||||||||| | | ||| | || || |||||| | |||| ||| ||| |
|
|
| T |
8453335 |
tctcaagatgctttctatttcagactgtgatggaataaagatcataggtgaagagttttacg---acagtagttcaataaatgtgctgttcaggtctctt |
8453239 |
T |
 |
| Q |
181 |
gaagttttgaaatttgagaagatgaacaattgggaggaatggt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8453238 |
gaagttttgaaatttgagaagatgaacaattgggaggaatggt |
8453196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 5279406 - 5279299
Alignment:
| Q |
37 |
tgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagt |
136 |
Q |
| |
|
|||||||| |||| ||| || ||||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||| |||| || |||||||||| |
|
|
| T |
5279406 |
tgtggattttgtttccagtttccaccacttgggcagcttccctctcttaaggagctttctatttcagaatgtgatggaatagagattatcggtgaagagt |
5279307 |
T |
 |
| Q |
137 |
ttcatggc |
144 |
Q |
| |
|
|| ||||| |
|
|
| T |
5279306 |
tttatggc |
5279299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 8570264 - 8570423
Alignment:
| Q |
61 |
ccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaa |
160 |
Q |
| |
|
|||||||||||||| || | |||||||||||||||||||||| | ||| | || ||| | |||||||| |||||||| | ||||| | || ||||| |
|
|
| T |
8570264 |
ccacttgggcagctcccctatctcaaggagctttctatttcatattgttatggtatagaaatcattggcaaagagttttacggcaatag---ttcaacaa |
8570360 |
T |
 |
| Q |
161 |
atgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatggt |
223 |
Q |
| |
|
| |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
8570361 |
ttattccgttcaggtcccttgaagttttggaatttgcatggatgaacaattgggaggaatggt |
8570423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 6555742 - 6555918
Alignment:
| Q |
43 |
ttatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtttcatg |
142 |
Q |
| |
|
||||||||| |||| || ||||||| || || |||||||||||| | ||||| |||| | ||||| |||||||||||||||| |||||||||| ||| |
|
|
| T |
6555742 |
ttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatg |
6555841 |
T |
 |
| Q |
143 |
gcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatgg |
222 |
Q |
| |
|
| ||| |||| ||||| |||||| ||| |||||||||| ||||| ||||||| | ||| ||| |||||||||||| |
|
|
| T |
6555842 |
g---caataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatgg |
6555918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 6840319 - 6840364
Alignment:
| Q |
178 |
cttgaagttttgaaatttgagaagatgaacaattgggaggaatggt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6840319 |
cttgaagttttgaaatttgagaagatgaacaattgggagaaatggt |
6840364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 6528134 - 6528330
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||| | ||||| ||||||||| |||| |||| ||||| || || |||||||| ||| | ||||| ||| |
|
|
| T |
6528134 |
catttacccaacttagtatctcttcaactgaatggttgtgggttatgttcctgtttgccaccccttggacaactcccttctcttaagaaactttccgttt |
6528233 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
| ||||| |||||||||||||||| |||||| ||| ||| |||| |||| ||||| |||||| ||| ||||||| || ||| || ||||||||| |
|
|
| T |
6528234 |
atgattgtgaaggaataaagatcattgatgaagatttttatg---acaataattcaacaattgttccattcaagtcccttcaattttcgatatttgagaa |
6528330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 6734668 - 6734512
Alignment:
| Q |
63 |
acttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaat |
162 |
Q |
| |
|
|||||| || || |||||||||||| | ||||| |||| | ||||| |||||||||||||||| |||||||||| |||| ||| |||| ||||| | |
|
|
| T |
6734668 |
acttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatgg---caataattcaacaatt |
6734572 |
T |
 |
| Q |
163 |
gttccgttcttgtcccttgaagttttgaaatttgagaagatgaacaattgggaggaatgg |
222 |
Q |
| |
|
||||| ||| |||||||||| ||||| ||||||| | ||| ||| |||||||||||| |
|
|
| T |
6734571 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatgg |
6734512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 6141024 - 6140932
Alignment:
| Q |
46 |
tgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagttt |
138 |
Q |
| |
|
|||||||| ||| |||||||||||||| | |||||||||||| ||||||| |||||| ||| | |||||| ||||||||||| ||||||| |
|
|
| T |
6141024 |
tgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatttcaggctgtcatggaatagagatcattggttcagagttt |
6140932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 6257940 - 6257848
Alignment:
| Q |
46 |
tgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagttt |
138 |
Q |
| |
|
|||||||| ||| ||||||||||| || | |||||||||||| ||||||| |||||| ||| | |||||||||||||||||| ||||||| |
|
|
| T |
6257940 |
tgttcccagttgccaccacttgggaagttcccttctctcaagaagctttccatttcaggctgtcatggaataaagatcattggttcagagttt |
6257848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 6236463 - 6236371
Alignment:
| Q |
46 |
tgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagttt |
138 |
Q |
| |
|
|||||||| ||| |||||||||||||| | |||||||||||| ||||||| || ||| |||| | ||||||| | |||||||| ||||||| |
|
|
| T |
6236463 |
tgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaataacgttcattggttcagagttt |
6236371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 6264420 - 6264364
Alignment:
| Q |
46 |
tgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttca |
102 |
Q |
| |
|
|||||||| ||| |||||||||||||| | |||||||||||| ||||||| |||||| |
|
|
| T |
6264420 |
tgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatttca |
6264364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6450047 - 6450266
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| ||||||| | | ||||||| ||| | |||||||||||||| || | ||| || ||||| ||||| |
|
|
| T |
6450047 |
catttacccaacttagtatctcttgaactgcggagctgtgaaatttgttccctgttgccgccacttgggcagctcccatttcttaaagagctccgtattt |
6450146 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
|| | ||| | |||||||||||||| || ||||||| |||| || |||| || || |||||| ||| || |||||||| |||||||||||| | |
|
|
| T |
6450147 |
cagattgtaatggaataaagatcatcggcaaagagttctatgg---aaataattcaataattgttccattcagatctcttgaagtattgaaatttgagca |
6450243 |
T |
 |
| Q |
201 |
gatgaacaattgggaggaatggt |
223 |
Q |
| |
|
| || | |||||||||||||||| |
|
|
| T |
6450244 |
gttggagaattgggaggaatggt |
6450266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6521391 - 6521533
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| || | ||||||| |||| || ||||||| || || |||||||||||| | ||||| |||| |
|
|
| T |
6521391 |
catttacccaacttagtatctcttcaactg--aaggattgtag-atgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccattt |
6521487 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaa |
146 |
Q |
| |
|
| ||||| |||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
6521488 |
atgactgtgaaggaataaagatcattgatgaagatttttatggcaa |
6521533 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 13271844 - 13271936
Alignment:
| Q |
46 |
tgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagttt |
138 |
Q |
| |
|
|||||||| ||| |||||||||||||| | ||||||||| || ||||||| ||||| ||| | |||||| ||||||||||| ||||||| |
|
|
| T |
13271844 |
tgttcccagttgccaccacttgggcagttgccttctctcgagaagctttccatttctggctgtcatggaatagagatcattggttcagagttt |
13271936 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8748 - 8966
Alignment:
| Q |
1 |
catttacccaacttggtatctcttcaactgttaagctgtggattatgttcccatttgtcaccacttgggcagcttccttctctcaaggagctttctattt |
100 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| | ||||| ||||||||| |||| || ||||||| || || |||||||||||| | ||||| |||| |
|
|
| T |
8748 |
catttaccgaacttagtatctcttcaactgaagggttgtgggttatgttcctgtttgccagcacttggacaactcccttctctcaagaaactttccattt |
8847 |
T |
 |
| Q |
101 |
caaaatgtgacggaataaagatcattggtgaagagtttcatggcaacaacaatttaacaaatgttccgttcttgtcccttgaagttttgaaatttgagaa |
200 |
Q |
| |
|
| ||||| |||||||||||||||| |||||| ||| |||| ||| |||| ||||| |||||| ||| |||||||||| ||||| ||||| | | |
|
|
| T |
8848 |
atgactgtgaaggaataaagatcattgatgaagaattttatgg---caataattcaacaattgttccattcaagtcccttgaatatttgagatttgtgga |
8944 |
T |
 |
| Q |
201 |
gatgaacaattgggaggaatgg |
222 |
Q |
| |
|
||| ||| |||||||||||| |
|
|
| T |
8945 |
tatggtcaactgggaggaatgg |
8966 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 6574635 - 6574711
Alignment:
| Q |
61 |
ccacttgggcagcttccttctctcaaggagctttctatttcaaaatgtgacggaataaagatcattggtgaagagtt |
137 |
Q |
| |
|
|||||||| ||||| || | |||||||||||||| |||||| ||| | |||||||||||||| ||||||||||| |
|
|
| T |
6574635 |
ccacttggacagctcccatgtctcaaggagcttttcatttcaggttgtaatggaataaagatcatcggtgaagagtt |
6574711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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