View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16626_high_31 (Length: 215)
Name: NF16626_high_31
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16626_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 21185347 - 21185493
Alignment:
| Q |
10 |
tgagatgaaattgaacatcaagtcttagtatattaatattcatgatagcagagatatttggtggaaacaactccaaattgaaggtataccactcgaagta |
109 |
Q |
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| T |
21185347 |
tgagatgaaattgaacatcaagtcttagtatattaatattcatgatagcagagatatttggtggaaacaactccaaattgaaggtataccactcgaagta |
21185446 |
T |
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| Q |
110 |
ttataagtacattaatataacaatataatttgtaaaataaaaaagaa |
156 |
Q |
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||||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
21185447 |
ttataagtacattaatatagcaatataatttgtaaaatgaaaaagaa |
21185493 |
T |
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