View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16626_high_6 (Length: 422)
Name: NF16626_high_6
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16626_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 18 - 412
Target Start/End: Original strand, 7750120 - 7750514
Alignment:
| Q |
18 |
atatagatgtttccatgattgtgtaaggatttaatgtgctaacttttgttccaccctcgccctcatcaccaatggacaacaatgatgtgtttaatgaaat |
117 |
Q |
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| T |
7750120 |
atatagatgtttccatgattgtgtaaggatttaatgtgctaacttttgttccaccctcgccctcatcaccaatggacaacaatgatgtgtttaatgaaat |
7750219 |
T |
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| Q |
118 |
ctgtttttcattgattctaatagatttcactccaatgaaatattcagctgcaggtcttccatggaaaattggcccggccgagttatcaggattttcgatc |
217 |
Q |
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| T |
7750220 |
ctgtttttcatcgattctaatagatttcactccaatgaaatattcagctgcaggtcttccatggaaaattggcccggccgagttatcaggattttcgatc |
7750319 |
T |
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| Q |
218 |
agtggtgtaaacataagaaatttggaaacatcaatcccgggaaggaaaacataagggccatcaccaaagaacaaaacaccactagatgtttttgaagaac |
317 |
Q |
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| T |
7750320 |
agtggtgtaaacataagaaatttggaaacatcaatcccgggaaggaaaacataagggccatcaccaaagaacaaaacaccactagatgtttttgaagaac |
7750419 |
T |
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| Q |
318 |
tcaaacatattgcaaactttgttttgaagttgaaagcagaagcaaaaagtgaaggtaatgaaatattactctttccaaaacctaccatgcctttg |
412 |
Q |
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| T |
7750420 |
tcaaacatattgcaaactttgttttgaagttgaaagcagaagcaaaaagtgaaggtaatgaaatattactctttccaaaacctgccatgcctttg |
7750514 |
T |
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