View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16626_low_10 (Length: 382)

Name: NF16626_low_10
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16626_low_10
NF16626_low_10
[»] chr7 (5 HSPs)
chr7 (18-375)||(7190150-7190504)
chr7 (276-375)||(8839327-8839426)
chr7 (276-375)||(29059801-29059900)
chr7 (276-375)||(31492099-31492198)
chr7 (286-375)||(2657892-2657981)
[»] chr1 (3 HSPs)
chr1 (296-375)||(29124741-29124820)
chr1 (286-362)||(45806245-45806321)
chr1 (279-375)||(22022116-22022212)
[»] chr8 (5 HSPs)
chr8 (276-372)||(15682928-15683024)
chr8 (286-375)||(12958141-12958230)
chr8 (286-375)||(2743929-2744018)
chr8 (276-375)||(19715772-19715871)
chr8 (323-375)||(30936000-30936052)
[»] chr6 (4 HSPs)
chr6 (296-375)||(12411144-12411223)
chr6 (281-375)||(25084030-25084124)
chr6 (285-362)||(28099252-28099329)
chr6 (313-375)||(21910201-21910263)
[»] chr3 (3 HSPs)
chr3 (276-375)||(25224695-25224794)
chr3 (327-375)||(28967279-28967327)
chr3 (323-375)||(40294608-40294660)
[»] chr2 (4 HSPs)
chr2 (286-375)||(31579285-31579374)
chr2 (286-375)||(12133286-12133375)
chr2 (276-375)||(5394393-5394491)
chr2 (276-375)||(44732619-44732718)
[»] chr4 (7 HSPs)
chr4 (276-375)||(31307112-31307211)
chr4 (296-375)||(38844234-38844313)
chr4 (286-337)||(51626362-51626413)
chr4 (317-375)||(25712503-25712561)
chr4 (286-375)||(38766085-38766174)
chr4 (276-360)||(35972354-35972438)
chr4 (276-344)||(46016176-46016244)
[»] scaffold0182 (1 HSPs)
scaffold0182 (276-362)||(26340-26426)
[»] chr5 (2 HSPs)
chr5 (286-375)||(10591923-10592012)
chr5 (277-357)||(18909348-18909428)


Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 375
Target Start/End: Original strand, 7190150 - 7190504
Alignment:
Q  18 attcctttaagaggagagaaggggtagcatgacctaccagtttaggaataatgagaagttcatgaattataggtaactatttgagagagaagttatagtt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7190150 attcctttaagaggagagaaggggtagcatgacctaccagtttaggaataatgagaagttcatgaattataggtaactatttgagagagaagttatagtt 7190249  T
Q  118 gaaattgatgcaaagcatatctacttgtttaccaatagagcggtttcatagagaagaaacaataacacgcaaaacttgttagggtttcatatgataacaa 217  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  7190250 gaaattgatgcaaagtatatctacttgtttaccaatagaggggtttcatagagaagaaacaata--acgcaaaacttgttagggtttcatatgataacaa 7190347  T
Q  218 ccacgtaacatattaaaaggttacaaaaacaacatataataagcgtcgtcttctctttggcggcaagttctccgtaaaagttttaacacggctgtatgcc 317  Q
    | || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  7190348 caacataacatattaaaaggttac-aaaacaacatataataagcgtcgtcttctctttggcggtaagttctccctaaaagttttaacacggctgcatgcc 7190446  T
Q  318 caatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||| ||| |||| ||||||| |||| | ||||| ||||||||| || || |||||||    
T  7190447 caatgctgaattcaaactcataaccttggttaagctagaagagatttattccatctca 7190504  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 8839327 - 8839426
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||||||  |||||| ||| ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  8839327 ggcggcagattctccctaagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 8839426  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 29059900 - 29059801
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  29059900 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 29059801  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 31492198 - 31492099
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31492198 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31492099  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 2657892 - 2657981
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| |||||||||   |||| ||||||||  ||| ||| ||||||| | ||| ||||||||||||||||||| ||| |||||||    
T  2657892 tctccttaagagttttaacgttgctgcatgcccaaggctgtatttgaactcagggccttgattaagttagaagagactcgttccatctca 2657981  T

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Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 375
Target Start/End: Complemental strand, 29124820 - 29124741
Alignment:
Q  296 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||  | ||||| ||||||||||| |||||||||||    
T  29124820 agttttaacgctgctgcatgcccaatgctggattcgaactcatgaccctggttaagctagaagagactcgtttcatctca 29124741  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 45806321 - 45806245
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 362  Q
    ||||| ||| |||||||| || |||| |||||||| |||| ||||||||||| ||||| | ||||| ||||||||||    
T  45806321 tctccctaagagttttaaaactgctgcatgcccaagactgaattcgaactcaggaccttggttaagatagaagagac 45806245  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 375
Target Start/End: Complemental strand, 22022212 - 22022116
Alignment:
Q  279 ggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||||||||||| ||| ||||||||  | |||| ||||||||  |||||||||||| ||  ||||   ||||| |||||||||| |||| |||||||    
T  22022212 ggcaagttctccctaagagttttaatgctgctgcatgcccaaggctggattcgaacccacaaccttagttaagctagaagagacctgttccatctca 22022116  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 372
Target Start/End: Complemental strand, 15683024 - 15682928
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatc 372  Q
    ||||||| | ||||| ||| ||||||||| | |||| ||||||||  ||||||||||||||| ||||| ||||||| ||||||||||| ||| ||||    
T  15683024 ggcggcaggctctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttgattaagctagaagagactcgttccatc 15682928  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 12958141 - 12958230
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| ||||||||| | |||| ||||||||| |||||||| ||| |||||||| | ||||| ||||||||||| ||| |||||||    
T  12958141 tctccctaagagttttaacgctgctgcatgcccaatgctggattcaaacccatgaccttggttaagctagaagagactagttccatctca 12958230  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 2744018 - 2743929
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  2744018 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 2743929  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 19715772 - 19715871
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||| ||||| | | ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||| |||| |||| |||||||    
T  19715772 ggcggcaagctctccctgagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaaaagacatgttccatctca 19715871  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 30936052 - 30936000
Alignment:
Q  323 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||||||||| ||||| | ||||||||||||||||  ||| |||||||    
T  30936052 ctggattcgaactcaggaccttggttaagttagaagagacccgttccatctca 30936000  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 375
Target Start/End: Complemental strand, 12411223 - 12411144
Alignment:
Q  296 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||| | |||| ||||||||  ||||||||||||||| ||||| | |||||||||||||||| |||| |||||||    
T  12411223 agttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttggttaagttagaagagacctgttccatctca 12411144  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 375
Target Start/End: Complemental strand, 25084124 - 25084030
Alignment:
Q  281 caagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||| ||||| ||| ||||||||||  |||| ||| |||| |||| ||||||||||| ||| | ||||||| |||||||||||||| ||||||||    
T  25084124 caagctctccctaagagttttaacattgctgcatgtccaagactgaattcgaactcaagactttgattaagctagaagagacttgtgtcatctca 25084030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 28099329 - 28099252
Alignment:
Q  285 ttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 362  Q
    |||||| ||||||||||||||| |||| ||||||||  |||||||||||| || |||||   ||||| ||||||||||    
T  28099329 ttctccctaaaagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttagttaaggtagaagagac 28099252  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 21910263 - 21910201
Alignment:
Q  313 atgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||  |||||||||||| || || || | ||||| |||||||||||||||||||||||    
T  21910263 atgcccaaggctggattcgaacccaggatcttggttaagctagaagagacttgtttcatctca 21910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 25224794 - 25224695
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||||||||| ||| ||||||||| | |||| || ||||| ||| ||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  25224794 ggcggcaagttctccttaagagttttaacgctgctgcattcccaaaacttgattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 25224695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 28967279 - 28967327
Alignment:
Q  327 attcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||||||| |||||||| | ||||||||||||||||| || ||||||||    
T  28967279 attcgaacacatgaccttggttaagttagaagagactcgtgtcatctca 28967327  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 40294660 - 40294608
Alignment:
Q  323 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||||||||| ||||| ||||||| |||| |||||| || ||||||||    
T  40294660 ctggattcgaactcaggaccttgattaaggtagaggagactcgtgtcatctca 40294608  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 31579285 - 31579374
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||||||||||||||| | || ||||||||  |||||||||||| || ||||| ||||||| ||||||||||  ||| |||||||    
T  31579285 tctccctaaaagttttaacactgttgcatgcccaaggctggattcgaacccaagaccttgattaagctagaagagacccgttacatctca 31579374  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 12133286 - 12133375
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| |||||||||   |||| ||| ||||  |||||||||||| |||||||| ||||||| ||||||||||| ||| |||||||    
T  12133286 tctccctaagagttttaacgttgctgcatgtccaaggctggattcgaacccatgaccttgattaagctagaagagactcgttccatctca 12133375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 5394491 - 5394393
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||| | ||||| ||| |||||||||| | ||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  5394491 ggcggcaggctctccctaagagttttaacatg-ctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagactcgttccatctca 5394393  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 44732619 - 44732718
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| || |||||||  ||| |||||||    
T  44732619 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctataagagacccgttccatctca 44732718  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 31307112 - 31307211
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31307112 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31307211  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 375
Target Start/End: Original strand, 38844234 - 38844313
Alignment:
Q  296 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||||||| | | || ||||||||  ||||||||||||||||||||| | ||||| ||||||||||| ||| |||||||    
T  38844234 agttttaacgctgttgcatgcccaaagctggattcgaactcatgaccttggttaagctagaagagactcgttccatctca 38844313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 51626362 - 51626413
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactca 337  Q
    ||||| ||||||||||||||| |||| ||||||||  |||||||||||||||    
T  51626362 tctccctaaaagttttaacactgctgcatgcccaaggctggattcgaactca 51626413  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 25712503 - 25712561
Alignment:
Q  317 ccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    |||| |||||||||||| ||||||||| | ||||| |||| ||||||||| ||||||||    
T  25712503 ccaagactggattcgaattcatgaccttgtttaagctagaggagacttgtatcatctca 25712561  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 38766174 - 38766085
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| ||||||||| | |||| ||||||||  |||||||| ||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  38766174 tctccctaagagttttaacgctgctgcatgcccaaggctggattcaaacccaggaccttggttaagctagaagagactcgttccatctca 38766085  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 35972438 - 35972354
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagag 360  Q
    ||||||||  ||||| ||| ||||||||| | ||||||||||||   |||||||||||| || ||||| | ||||| ||||||||    
T  35972438 ggcggcaaactctccctaatagttttaacgctgctgtatgcccatggctggattcgaacccaagaccttggttaagctagaagag 35972354  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 46016244 - 46016176
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgaccta 344  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||||    
T  46016244 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccta 46016176  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 26426 - 26340
Alignment:
Q  276 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 362  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||    
T  26426 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagac 26340  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 10592012 - 10591923
Alignment:
Q  286 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 375  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||  ||||||||||  ||| |||||||    
T  10592012 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaatctagaagagacccgttccatctca 10591923  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 357
Target Start/End: Original strand, 18909348 - 18909428
Alignment:
Q  277 gcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaa 357  Q
    ||||||| |||||| ||| ||||||||||| |||| || |||||  ||||||||||||  | ||||| ||||||| |||||    
T  18909348 gcggcaaattctccctaagagttttaacactgctgcatacccaaggctggattcgaacctaggaccttgattaagctagaa 18909428  T

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