View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16626_low_14 (Length: 361)

Name: NF16626_low_14
Description: NF16626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16626_low_14
NF16626_low_14
[»] chr3 (29 HSPs)
chr3 (1-131)||(43750136-43750266)
chr3 (1-131)||(29375137-29375267)
chr3 (1-131)||(19241816-19241946)
chr3 (1-130)||(198855-198984)
chr3 (1-137)||(3383069-3383205)
chr3 (1-131)||(13364842-13364972)
chr3 (1-130)||(36881282-36881409)
chr3 (1-130)||(23088079-23088208)
chr3 (1-130)||(46694258-46694387)
chr3 (26-123)||(32835129-32835226)
chr3 (9-115)||(13702784-13702890)
chr3 (52-130)||(27707363-27707441)
chr3 (1-70)||(37780997-37781066)
chr3 (2-79)||(1455297-1455374)
chr3 (77-131)||(12094581-12094635)
chr3 (2-80)||(44522491-44522567)
chr3 (77-131)||(44277455-44277509)
chr3 (1-70)||(19897075-19897144)
chr3 (77-130)||(19911509-19911562)
chr3 (43-132)||(37293435-37293524)
chr3 (2-70)||(52805175-52805243)
chr3 (77-130)||(38805245-38805298)
chr3 (89-130)||(44276775-44276816)
chr3 (2-70)||(24064284-24064352)
chr3 (45-113)||(48820444-48820512)
chr3 (89-132)||(19912174-19912217)
chr3 (89-132)||(38806341-38806384)
chr3 (102-130)||(21797556-21797584)
chr3 (1-37)||(27707136-27707172)
[»] chr2 (17 HSPs)
chr2 (1-130)||(1102503-1102632)
chr2 (2-131)||(12969888-12970017)
chr2 (1-133)||(3518905-3519037)
chr2 (1-130)||(39938170-39938299)
chr2 (1-129)||(23366790-23366918)
chr2 (3-130)||(37673887-37674014)
chr2 (1-102)||(1646317-1646416)
chr2 (5-70)||(18078116-18078181)
chr2 (77-130)||(34224378-34224431)
chr2 (20-70)||(14779839-14779889)
chr2 (8-70)||(35179090-35179152)
chr2 (1-53)||(22388283-22388335)
chr2 (3-70)||(39562037-39562102)
chr2 (2-82)||(19976380-19976459)
chr2 (4-72)||(14117753-14117819)
chr2 (43-79)||(32840365-32840401)
chr2 (102-130)||(44365157-44365185)
[»] chr1 (35 HSPs)
chr1 (2-130)||(24772054-24772182)
chr1 (2-129)||(27211113-27211240)
chr1 (1-130)||(284333-284462)
chr1 (1-132)||(46771635-46771766)
chr1 (1-130)||(23045427-23045556)
chr1 (1-119)||(23526251-23526369)
chr1 (1-131)||(40783805-40783935)
chr1 (1-130)||(321626-321755)
chr1 (1-123)||(47038000-47038120)
chr1 (2-110)||(33082765-33082873)
chr1 (1-115)||(52037270-52037382)
chr1 (2-123)||(1749314-1749435)
chr1 (2-70)||(7765073-7765141)
chr1 (2-79)||(1837978-1838053)
chr1 (5-70)||(40562733-40562797)
chr1 (77-133)||(9588667-9588723)
chr1 (77-131)||(3943059-3943113)
chr1 (22-130)||(51064925-51065033)
chr1 (8-82)||(3657125-3657199)
chr1 (77-123)||(13984991-13985037)
chr1 (1-70)||(18396755-18396824)
chr1 (77-130)||(41959078-41959131)
chr1 (89-132)||(44227846-44227889)
chr1 (2-82)||(31003935-31004012)
chr1 (1-82)||(40261419-40261501)
chr1 (1-82)||(52478016-52478095)
chr1 (77-122)||(1168369-1168414)
chr1 (1-62)||(31061602-31061662)
chr1 (1-80)||(27143159-27143239)
chr1 (89-132)||(41959809-41959852)
chr1 (77-124)||(44228228-44228275)
chr1 (1-82)||(14351908-14351989)
chr1 (89-130)||(3943763-3943804)
chr1 (98-131)||(10845480-10845513)
chr1 (64-116)||(40564241-40564293)
[»] scaffold1431 (1 HSPs)
scaffold1431 (1-131)||(47-177)
[»] chr4 (28 HSPs)
chr4 (1-131)||(40122633-40122763)
chr4 (1-131)||(21310424-21310554)
chr4 (1-131)||(25704650-25704780)
chr4 (1-132)||(21661683-21661814)
chr4 (1-132)||(21670447-21670578)
chr4 (1-132)||(24706395-24706526)
chr4 (2-130)||(20249162-20249289)
chr4 (1-131)||(12071560-12071690)
chr4 (1-131)||(14261043-14261173)
chr4 (1-123)||(22321415-22321537)
chr4 (1-123)||(44568844-44568966)
chr4 (1-130)||(34324730-34324860)
chr4 (1-132)||(50767862-50767993)
chr4 (1-124)||(31892244-31892363)
chr4 (14-100)||(1988065-1988151)
chr4 (1-70)||(20714496-20714565)
chr4 (1-130)||(26676714-26676843)
chr4 (1-80)||(6129096-6129175)
chr4 (1-58)||(21064834-21064889)
chr4 (1-79)||(32543532-32543609)
chr4 (1-105)||(19692748-19692852)
chr4 (1-105)||(19703333-19703437)
chr4 (1-62)||(18507412-18507472)
chr4 (43-79)||(3929595-3929631)
chr4 (1-33)||(51777715-51777747)
chr4 (15-70)||(34284179-34284234)
chr4 (43-82)||(48652268-48652307)
chr4 (77-115)||(19361662-19361700)
[»] chr8 (28 HSPs)
chr8 (1-130)||(3585451-3585580)
chr8 (1-123)||(7146920-7147042)
chr8 (1-131)||(11646473-11646603)
chr8 (1-138)||(2540079-2540216)
chr8 (1-132)||(40058451-40058582)
chr8 (1-130)||(43275547-43275674)
chr8 (1-130)||(11174371-11174500)
chr8 (1-130)||(37345571-37345700)
chr8 (1-130)||(27034997-27035125)
chr8 (1-123)||(30999671-30999791)
chr8 (1-131)||(40918879-40919007)
chr8 (1-130)||(36068080-36068209)
chr8 (1-130)||(20546437-20546564)
chr8 (1-82)||(28326805-28326883)
chr8 (2-123)||(35866621-35866742)
chr8 (77-130)||(40486453-40486506)
chr8 (1-124)||(28562427-28562551)
chr8 (77-131)||(8697898-8697952)
chr8 (77-131)||(41307961-41308015)
chr8 (77-130)||(45278701-45278754)
chr8 (77-124)||(10646598-10646645)
chr8 (1-70)||(13881102-13881172)
chr8 (89-132)||(41305760-41305803)
chr8 (21-124)||(28567925-28568029)
chr8 (21-124)||(28575518-28575622)
chr8 (1-70)||(10181005-10181073)
chr8 (1-82)||(37510314-37510395)
chr8 (102-130)||(40494384-40494412)
[»] chr6 (20 HSPs)
chr6 (1-130)||(8626482-8626611)
chr6 (1-131)||(1605578-1605708)
chr6 (1-131)||(29260191-29260321)
chr6 (1-131)||(13757207-13757337)
chr6 (2-132)||(15064843-15064973)
chr6 (1-123)||(30734631-30734753)
chr6 (1-131)||(7761300-7761428)
chr6 (14-126)||(30734771-30734881)
chr6 (1-115)||(8235639-8235753)
chr6 (1-131)||(17942442-17942574)
chr6 (1-115)||(31559884-31559998)
chr6 (1-130)||(4129435-4129556)
chr6 (3-79)||(11370635-11370711)
chr6 (77-132)||(19996715-19996770)
chr6 (1-70)||(3798163-3798232)
chr6 (15-79)||(21277596-21277659)
chr6 (89-131)||(19996321-19996363)
chr6 (1-70)||(14287049-14287117)
chr6 (41-70)||(33845471-33845500)
chr6 (102-130)||(22054772-22054800)
[»] chr7 (19 HSPs)
chr7 (1-131)||(10981507-10981637)
chr7 (1-132)||(27813809-27813940)
chr7 (1-123)||(40348967-40349089)
chr7 (1-124)||(36453272-36453395)
chr7 (2-130)||(47110451-47110577)
chr7 (1-123)||(25614501-25614621)
chr7 (1-70)||(3091577-3091646)
chr7 (1-70)||(16360444-16360511)
chr7 (77-132)||(25060133-25060188)
chr7 (1-71)||(27942187-27942257)
chr7 (1-66)||(3498902-3498967)
chr7 (2-70)||(16662156-16662222)
chr7 (2-70)||(17636516-17636582)
chr7 (77-131)||(2911548-2911602)
chr7 (1-80)||(37983206-37983281)
chr7 (1-70)||(7743545-7743613)
chr7 (89-131)||(2910858-2910900)
chr7 (102-132)||(25566781-25566811)
chr7 (89-130)||(25059450-25059491)
[»] chr5 (20 HSPs)
chr5 (1-131)||(37900772-37900902)
chr5 (1-130)||(12807001-12807130)
chr5 (1-130)||(25773649-25773778)
chr5 (1-119)||(7277570-7277688)
chr5 (1-130)||(30720640-30720769)
chr5 (1-132)||(10285205-10285336)
chr5 (1-123)||(36561247-36561369)
chr5 (1-123)||(40886758-40886880)
chr5 (2-84)||(25683377-25683459)
chr5 (10-131)||(16983257-16983380)
chr5 (5-132)||(23098386-23098505)
chr5 (1-82)||(30403109-30403191)
chr5 (1-124)||(734486-734608)
chr5 (22-132)||(11796449-11796559)
chr5 (1-70)||(1056430-1056498)
chr5 (81-130)||(15305216-15305265)
chr5 (1-131)||(39070882-39071012)
chr5 (2-70)||(16054174-16054240)
chr5 (4-55)||(3763214-3763265)
chr5 (1-124)||(11319565-11319688)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-131)||(45453-45582)
[»] scaffold1770 (1 HSPs)
scaffold1770 (1-130)||(170-291)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-115)||(413-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-80)||(70874-70953)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-64)||(65311-65375)
[»] scaffold0257 (1 HSPs)
scaffold0257 (77-130)||(23467-23520)


Alignment Details
Target: chr3 (Bit Score: 111; Significance: 6e-56; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43750266 - 43750136
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  43750266 gaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatttctccaaa 43750167  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    ||||||||||||||||||||| || ||||||    
T  43750166 atggacatgtattttgaaacgaagggagtat 43750136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29375267 - 29375137
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  29375267 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaatttctccaaa 29375168  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  29375167 atggacatgtattttgaaacggagggagtat 29375137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19241816 - 19241946
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||  ||||    
T  19241816 gaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcaccaaa 19241915  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  19241916 atggacatgtattttgaaacggagggagtat 19241946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 198984 - 198855
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | | |||||||| ||||    
T  198984 gaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtcagtgcaatttctccaaa 198885  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  198884 atggacatgtattttgaaacggagggagta 198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3383205 - 3383069
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  3383205 gaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaa 3383106  T
Q  101 atggacatgtattttgaaacggagagagtattcattt 137  Q
    |||||||| ||||||||||||||  ||||||| ||||    
T  3383105 atggacatatattttgaaacggaaggagtattaattt 3383069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13364972 - 13364842
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  13364972 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 13364873  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    ||| |||||||||||||||||||| ||||||    
T  13364872 atgaacatgtattttgaaacggagggagtat 13364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36881409 - 36881282
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||  ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  36881409 gaaataataaataattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 36881312  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  36881311 atggacatgtattttgaaacggagggagta 36881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23088079 - 23088208
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  23088079 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaa 23088178  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    || ||||| ||||||||||| ||| |||||    
T  23088179 atagacatatattttgaaacagagggagta 23088208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 46694258 - 46694387
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||| | |||||||| ||||    
T  46694258 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctccaaa 46694357  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    | |||||||||||||||||||||| |||||    
T  46694358 aaggacatgtattttgaaacggagggagta 46694387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  26 atagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaacgga 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 13702890 - 13702784
Alignment:
Q  9 aaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacat 108  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| |||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  109 gtatttt 115  Q
    |||||||    
T  13702790 gtatttt 13702784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  52 aaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37781066 - 37780997
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||||||| |||||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  37781066 gaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttatt 37780997  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    |||||||||||||| ||||| ||||||||| | ||||| ||||||| |||||||||||||||||||||| | ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

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Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 12094635 - 12094581
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 12094581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttg 80  Q
    ||||||||||||||||| |||||||||||||| ||||  || ||||||| |||||||| |||||||||| | |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacac--atgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 44277455 - 44277509
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagtat 44277509  T

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Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19897075 - 19897144
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||| |  |||| ||||||||||||| ||||| | |||||||| |||||||||||||||||||    
T  19897075 gaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatt 19897144  T

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Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 19911562 - 19911509
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||| |||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagta 19911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 37293524 - 37293435
Alignment:
Q  43 aatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    ||||||||||||||| |||| ||||||| | || ||||||   |  ||||||||||||||||||| ||||| |||||||||| |||||||    
T  37293524 aatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggagtatt 37293435  T

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Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 52805175 - 52805243
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||  |||||||||||||||||| |  || | ||||||||||||||| ||||||||||||    
T  52805175 aaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttatt 52805243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| ||||||||  |||||||||||||||||| |||||||| |||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 44276816 - 44276775
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagta 44276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 24064352 - 24064284
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||| |||| ||||||||||||| |||||   ||||| || ||| |||||||||||||||    
T  24064352 aaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttatt 24064284  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  45 tttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtatt 113  Q
    |||||||||||||||||||||||||| ||||| |||| |||   ||||||| ||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 19912174 - 19912217
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||  ||||||||||||||||||||||||||| |||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagtatt 19912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 38806341 - 38806384
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||  ||||||||||||||||||||||||||| |||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagtatt 38806384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 21797584 - 21797556
Alignment:
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||||||||    
T  21797584 tggacatgtattttgaaacggagagagta 21797556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27707136 - 27707172
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacaca 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  27707136 gaaataataaatggttaaggatattatagaaaacaca 27707172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1102632 - 1102503
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  1102632 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaa 1102533  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  1102532 atggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 12969888 - 12970017
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||| |||||    
T  12969888 aaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 12969987  T
Q  102 tggacatgtattttgaaacggagagagtat 131  Q
    ||||||||||||||||||||||| ||||||    
T  12969988 tggacatgtattttgaaacggagggagtat 12970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 3519037 - 3518905
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||  ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  3519037 gaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 3518938  T
Q  101 atggacatgtattttgaaacggagagagtattc 133  Q
    |||||||||||||||||||||||| ||||||||    
T  3518937 atggacatgtattttgaaacggagggagtattc 3518905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 39938299 - 39938170
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  39938299 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 39938200  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||| ||||||||||||||||||| |||||    
T  39938199 atggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23366918 - 23366790
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  23366918 gaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 23366819  T
Q  101 atggacatgtattttgaaacggagagagt 129  Q
    |||||||||||||||||||||||| ||||    
T  23366818 atggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  3 aataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaat 102  Q
    ||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||| | |||||||| ||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  103 ggacatgtattttgaaacggagagagta 130  Q
    | |||||||||||||||||||| |||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1646416 - 1646317
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||| || |||||||| ||||    
T  1646416 gaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttagtttcttggttgctgcaatttctccaaa 1646319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18078181 - 18078116
Alignment:
Q  5 taataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||| |||||||||||||||||  |||| | || |||||||||||||||||||||||||    
T  18078181 taataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatt 18078116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 14779889 - 14779839
Alignment:
Q  20 agtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  14779889 agtattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttatt 14779839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 35179090 - 35179152
Alignment:
Q  8 taaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||| ||||||  |||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  35179090 taaatagttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatt 35179152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22388283 - 22388335
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaa 53  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||    
T  22388283 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 39562037 - 39562102
Alignment:
Q  3 aataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||| ||||||  ||||| ||| | |||||||| |||||||||||||||||||||    
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatt 39562102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 19976459 - 19976380
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    ||||||||||| | |||| ||||||||||||| | ||| ||||||| ||||||| || ||||||||||| | |||||||||    
T  19976459 aaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 14117753 - 14117819
Alignment:
Q  4 ataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgg 72  Q
    |||||||||  ||||||||||||||| ||| | |||||  |||||||||||| ||||||||||| ||||    
T  14117753 ataataaatacttaagagtattataggaaaaagacata--atttcatcaaaagtaacaaaattttttgg 14117819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 32840365 - 32840401
Alignment:
Q  43 aatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    |||||||||||||||||||||||||||| | ||||||    
T  32840365 aatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 44365185 - 44365157
Alignment:
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||||||||    
T  44365185 tggacatgtattttgaaacggagagagta 44365157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 24772054 - 24772182
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  24772054 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaaa 24772153  T
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    ||||||||||||||||||||||| |||||    
T  24772154 tggacatgtattttgaaacggagggagta 24772182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 27211113 - 27211240
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||| |||||    
T  27211113 aaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatttctccaaaa 27211212  T
Q  102 tggacatgtattttgaaacggagagagt 129  Q
    ||||||||||||||||||||||| ||||    
T  27211213 tggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 284462 - 284333
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  284462 gaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 284363  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  284362 atggacatgtattttgaaacggagggagta 284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 46771766 - 46771635
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||| |||||||| ||||    
T  46771766 gaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatttctccaaa 46771667  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    ||||||||||||||||||||||| ||||||||    
T  46771666 atggacatgtattttgaaacggatagagtatt 46771635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23045427 - 23045556
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  23045427 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 23045526  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  23045527 atggacatgtattttgaaacggagggagta 23045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 23526369 - 23526251
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||    
T  23526369 gaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttctccaaa 23526270  T
Q  101 atggacatgtattttgaaa 119  Q
    ||| |||||||||||||||    
T  23526269 atgaacatgtattttgaaa 23526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40783805 - 40783935
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||| | |||||||| ||||    
T  40783805 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaa 40783904  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    ||| |||||||||||||||||||| ||||||    
T  40783905 atgaacatgtattttgaaacggagggagtat 40783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 321755 - 321626
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| |||||  |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  321755 gaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 321656  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    ||| |||||||||||||||||||| |||||    
T  321655 atgaacatgtattttgaaacggagggagta 321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 47038000 - 47038120
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| | |||||| |||| | |||||||| ||||    
T  47038000 gaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttgatttcttagttagtacaatttctccaaa 47038097  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  47038098 atggacatgtattttgaaacgga 47038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 33082873 - 33082765
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||||||| | |||||||| |||||    
T  33082873 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 33082774  T
Q  102 tggacatgt 110  Q
    | |||||||    
T  33082773 tagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 52037270 - 52037382
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||| ||||| |||| || | ||||||||  |||    
T  52037270 gaaataataaatggttaagagtattatagaaaacacac--ataattttatcaaaaataataaaatttatttggttttttggataatgcaatttctctaaa 52037367  T
Q  101 atggacatgtatttt 115  Q
    |||||||||||||||    
T  52037368 atggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 1749435 - 1749314
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||   |||| ||  |||    
T  1749435 aaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgattactgtgattttttttaaa 1749336  T
Q  102 tggacatgtattttgaaacgga 123  Q
    |||| ||||||||| |||||||    
T  1749335 tggaaatgtattttaaaacgga 1749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 7765141 - 7765073
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  7765141 aaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttatt 7765073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    ||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||||||||||||| | ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacacata--atttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  5 taataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 9588723 - 9588667
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtattc 133  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtattc 9588667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 3943113 - 3943059
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 3943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 51064925 - 51065033
Alignment:
Q  22 tattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaacg 121  Q
    |||||||||||| ||||| | ||||||||||||||| |||| ||||||| | || ||||||   |  |||||||| |||||||||| ||||| |||||||    
T  51064925 tattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctttaaaatggacaagtattgtgaaacg 51065024  T
Q  122 gagagagta 130  Q
    ||| |||||    
T  51065025 gagggagta 51065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  8 taaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    ||||||||||||  |||||||||||| ||| | | |||||||| ||||||||||||||||||| | |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 13984991 - 13985037
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacgga 123  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 13985037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18396824 - 18396755
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||| |||||||||   ||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  18396824 gaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttatt 18396755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 41959131 - 41959078
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||| |||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagta 41959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 44227889 - 44227846
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagtatt 44227846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31003935 - 31004012
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    |||||||||||||||||| ||||||||||||| | ||| ||| |||||| ||||||   |||||||||| | |||||||||    
T  31003935 aaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40261419 - 40261501
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaaca-cacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    ||||||||||||||||||   |||||||||||| | ||||   ||||||||||||| |||||||||||||| | |||||||||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggt 40261501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52478095 - 52478016
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    ||||| ||||||  |||||  |||||||||||| ||||| |  ||||||||||||||||||||||||||| | |||||||||    
T  52478095 gaaatgataaatttttaaggttattatagaaaaaacacaaa--atttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacgg 122  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31061602 - 31061662
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaa 62  Q
    ||||||||||||||||| | ||||||| ||||| ||||| |||||||||| |||||||||||    
T  31061602 gaaataataaatggttagg-gtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27143159 - 27143239
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaaca-cacatataatttcatcaaaaataacaaaatttattgggtttcttg 80  Q
    ||||||||||||| |||||| |||||||||||| | | ||   |||||| ||||||||||||||||||||| | |||||||    
T  27143159 gaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 41959809 - 41959852
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||  ||||||||||||||||||||||||||| |||||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtatt 41959852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 44228228 - 44228275
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggag 124  Q
    |||||||||  |||||||| ||||||||||||||||||||||| ||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggag 44228275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14351908 - 14351989
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacat-ataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    |||||| |||||||||| |  |||||||||||| | |||| | ||| |||||||||||||||||||||||| | |||||||||    
T  14351908 gaaatattaaatggttacggatattatagaaaata-acattagaatatcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||  ||||||||||||||||||||||||||| |||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 10845513 - 10845480
Alignment:
Q  98 aaaatggacatgtattttgaaacggagagagtat 131  Q
    ||||||||||||||||||||||||||| ||||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagtat 10845480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  64 atttattgggtttcttggttactccaatttcttcaaaatggacatgtattttg 116  Q
    ||||||| ||||||||||||||| | |||| | |||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 47 - 177
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  47 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 146  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||||||||||    
T  147 atggacatgtattttgaaacggagagagtat 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 8e-49; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40122633 - 40122763
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||    
T  40122633 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaatttctccaaa 40122732  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  40122733 atggacatgtattttgaaacggagggagtat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21310554 - 21310424
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  21310554 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 21310455  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  21310454 atggacatgtattttgaaacggagggagtat 21310424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25704780 - 25704650
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  25704780 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 25704681  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  25704680 atggacatgtattttgaaacggagggagtat 25704650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21661683 - 21661814
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  21661683 gaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaatttctccaaa 21661782  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    ||||||||||||||||||| |||| |||||||    
T  21661783 atggacatgtattttgaaagggagggagtatt 21661814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21670447 - 21670578
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  21670447 gaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaatttctccaaa 21670546  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    ||||||||||||||||||| |||| |||||||    
T  21670547 atggacatgtattttgaaagggagggagtatt 21670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24706395 - 24706526
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  24706395 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 24706494  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||||||||||||||||  |||||||    
T  24706495 atggacatgtattttgaaacggatggagtatt 24706526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 20249162 - 20249289
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||| | |||||| | |||||    
T  20249162 aaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatttatccaaaa 20249260  T
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||||||||    
T  20249261 tggacatgtattttgaaacggagagagta 20249289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12071690 - 12071560
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||| ||||||| | |||||||| ||||    
T  12071690 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatttctccaaa 12071591  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  12071590 atggacatgtattttgaaacggagggagtat 12071560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14261173 - 14261043
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||  ||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  14261173 gaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 14261074  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  14261073 atggacatgtattttgaaacggagggagtat 14261043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22321415 - 22321537
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  22321415 gaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 22321514  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  22321515 atggacatgtattttgaaacgga 22321537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 44568966 - 44568844
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||| ||||||| | |||||||||||||    
T  44568966 gaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggttagtgcaatttcttcaaa 44568867  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  44568866 atggacatgtattttgaaacgga 44568844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 34324730 - 34324860
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaattt-attgggtttcttggttactccaatttcttcaa 99  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||  |||||||||||| | |||||||| |||    
T  34324730 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaatttctccaa 34324829  T
Q  100 aatggacatgtattttgaaacggagagagta 130  Q
    ||||||||||||||||||||||||| |||||    
T  34324830 aatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 50767993 - 50767862
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| | ||||||||  |||    
T  50767993 gaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctctaaa 50767894  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    ||| | |||||||||||||||||  |||||||    
T  50767893 atgaatatgtattttgaaacggaatgagtatt 50767862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 31892363 - 31892244
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||| ||  |||||||||||||||||    |||||||||||||||||| |||||||||| | ||||||||||||| ||||||||| |||    
T  31892363 gaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctttaaa 31892268  T
Q  101 atggacatgtattttgaaacggag 124  Q
    ||| ||||||||||||| ||||||    
T  31892267 atgaacatgtattttgatacggag 31892244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 1988151 - 1988065
Alignment:
Q  14 gttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||| |||||||||| | |||||| |||||| |||||||| ||||    
T  1988151 gttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctccaaa 1988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20714496 - 20714565
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaa-cacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  20714496 gaaataataaatggttaag-gtattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatt 20714565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 26676714 - 26676843
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  |||| ||||||||||||| ||||  | |||||||| |||||| |||| ||||||| | || ||||||   |  ||||||||||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    ||||| | ||||| ||||||||||||||||    
T  26676814 atggataagtattgtgaaacggagagagta 26676843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6129096 - 6129175
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttg 80  Q
    ||||||||||||| ||||| ||||| ||||||| | ||| | ||||| |||||||||||||||||||||| | |||||||    
T  6129096 gaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttg 6129175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21064889 - 21064834
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaata 58  Q
    |||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||    
T  21064889 gaaataataaatagttaagagtattataaaaaacacac--ataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32543609 - 32543532
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    ||||||||||||| ||||| |||||||| |||| ||||| | ||||||||||||| |||||||| ||||| ||||||||    
T  32543609 gaaataataaatgattaagggtattataaaaaa-acacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19692852 - 19692748
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  ||||  |||||||||||| ||||| | |||||||| |||||| |||| ||||||| | |||||||||   |  ||||||||||||    
T  19692852 gaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaaa 19692753  T
Q  101 atgga 105  Q
    |||||    
T  19692752 atgga 19692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19703437 - 19703333
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  ||||  |||||||||||| ||||| | |||||||| |||||| |||| ||||||| | |||||||||   |  ||||||||||||    
T  19703437 gaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaaa 19703338  T
Q  101 atgga 105  Q
    |||||    
T  19703337 atgga 19703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18507412 - 18507472
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaa 62  Q
    |||||||||||| || ||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  18507412 gaaataataaattgtcaag-gtattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3929631 - 3929595
Alignment:
Q  43 aatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3929631 aatttcatcaaaaataacaaaatttattggttttctt 3929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51777747 - 51777715
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  51777747 gaaataataaatggttaagagtattatagaaaa 51777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 34284179 - 34284234
Alignment:
Q  15 ttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||| ||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284179 ttaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 48652307 - 48652268
Alignment:
Q  43 aatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  48652307 aatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtatttt 115  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3585580 - 3585451
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  3585580 gaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 3585481  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  3585480 atggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 7147042 - 7146920
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| |||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7147042 gaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttcttcaaa 7146943  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  7146942 atggacatgtattttgaaacgga 7146920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11646473 - 11646603
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  11646473 gaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 11646572  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    ||||||||||||||||||||| || ||||||    
T  11646573 atggacatgtattttgaaacgaagggagtat 11646603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2540079 - 2540216
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  2540079 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 2540178  T
Q  101 atggacatgtattttgaaacggagagagtattcatttt 138  Q
    ||||||||||||||||||||||||  |||||| |||||    
T  2540179 atggacatgtattttgaaacggaggaagtattaatttt 2540216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40058451 - 40058582
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| | ||    
T  40058451 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccgaa 40058550  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||||||||||||||||| |||||||    
T  40058551 atggacatgtattttgaaacggagggagtatt 40058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 43275547 - 43275674
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  43275547 gaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 43275644  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  43275645 atggacatgtattttgaaacggagggagta 43275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 11174371 - 11174500
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  11174371 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 11174470  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    ||| |||||||||||||||||||| |||||    
T  11174471 atgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37345700 - 37345571
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  37345700 gaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttggtgcaatttcttcaaa 37345601  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  37345600 atggacatgtattttgaaacggagggagta 37345571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27035125 - 27034997
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||| ||||    
T  27035125 gaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatttctccaaa 27035027  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  27035026 atggacatgtattttgaaacggagggagta 27034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30999671 - 30999791
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  30999671 gaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 30999768  T
Q  101 atggacatgtattttgaaacgga 123  Q
    || ||||||||||||||||||||    
T  30999769 attgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40918879 - 40919007
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| |||||||||||||||||||| |  |||||| ||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  40918879 gaaataataaatgattaagggtattatagaaaacacacatgt--tttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 40918976  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  40918977 atggacatgtattttgaaacggagggagtat 40919007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36068209 - 36068080
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||| |||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||| | ||||| || ||||    
T  36068209 gaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcctccaaa 36068110  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  36068109 atggacatgtattttgaaacggagggagta 36068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 20546437 - 20546564
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||| |||||| |||| ||| ||||||||||||  |||||||||||||||||||||||||||   ||||||| ||  | |||||||||||||    
T  20546437 gaaataataaattgttaagggtatcatataaaacacacata--atttcatcaaaaataacaaaatttatttaatttcttgattgttgcaatttcttcaaa 20546534  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||| |||||||||| |||| |||||    
T  20546535 atggacatatattttgaaatggagggagta 20546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28326805 - 28326883
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    |||||||||||| |||||||||||||| |||||   ||| |||||||||||||||||||||||||||||| | |||||||||    
T  28326805 gaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 35866742 - 35866621
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||| ||||| ||||||||||||| ||||| | |||||||| ||||||||||| ||||||    |||||||||   |  |||||||| ||||    
T  35866742 aaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatttctttaaaa 35866643  T
Q  102 tggacatgtattttgaaacgga 123  Q
    |||||| ||||| |||||||||    
T  35866642 tggacaagtattgtgaaacgga 35866621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 40486453 - 40486506
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 40486506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 28562551 - 28562427
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaaca-cacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaa 99  Q
    ||||| |||||||  |||| ||||||||||||| | |||| | ||||||||||||||| |||| ||||||| | || ||||||   |  |||||||||||    
T  28562551 gaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaa 28562452  T
Q  100 aatggacatgtattttgaaacggag 124  Q
    |||||||| ||||||||||||||||    
T  28562451 aatggacaagtattttgaaacggag 28562427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 8697898 - 8697952
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 8697952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 41307961 - 41308015
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtat 41308015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 45278701 - 45278754
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 45278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 10646645 - 10646598
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggag 124  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggag 10646598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13881102 - 13881172
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaaca-cacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||| ||||| ||||||||||||| | | || | ||||||||||||||||||||||||||||    
T  13881102 gaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatt 13881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 41305803 - 41305760
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagtatt 41305760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 28568029 - 28567925
Alignment:
Q  21 gtattatagaaaac-acacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaa 119  Q
    |||||||||||||  ||||| | |||||||| |||||| |||| ||||||| | ||  |||||   |  ||||||||||||||||||| |||||||||||    
T  28568029 gtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttcaaaatggacaagtattttgaaa 28567930  T
Q  120 cggag 124  Q
    |||||    
T  28567929 cggag 28567925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 28575622 - 28575518
Alignment:
Q  21 gtattatagaaaac-acacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaa 119  Q
    |||||||||||||  ||||| | |||||||| |||||| |||| ||||||| | ||  |||||   |  ||||||||||||||||||| |||||||||||    
T  28575622 gtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttcaaaatggacaagtattttgaaa 28575523  T
Q  120 cggag 124  Q
    |||||    
T  28575522 cggag 28575518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10181005 - 10181073
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||||  |||||||| |||| ||| |  |||||| || |||||||||||||||||||    
T  10181005 gaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttatt 10181073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37510395 - 37510314
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    |||||| |||||| ||||| ||||||| ||||| | | | | ||||| || |||||||||||||||||||  ||||||||||    
T  37510395 gaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 40494412 - 40494384
Alignment:
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||||||||    
T  40494412 tggacatgtattttgaaacggagagagta 40494384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 8626611 - 8626482
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  8626611 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttcttcaaa 8626512  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  8626511 atggacatgtattttgaaacggagggagta 8626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1605708 - 1605578
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  1605708 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 1605609  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  1605608 atggacatgtattttgaaacggagggagtat 1605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29260321 - 29260191
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  29260321 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 29260222  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  29260221 atggacatgtattttgaaacggagggagtat 29260191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13757337 - 13757207
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||| || ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |  ||||||| ||||    
T  13757337 gaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatttctccaaa 13757238  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||||||||||    
T  13757237 atggacatgtattttgaaacggagagagtat 13757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 15064843 - 15064973
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||||  ||||    
T  15064843 aaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatttctctaaaa 15064942  T
Q  102 tggacatgtattttgaaacggagagagtatt 132  Q
    ||||||||||||||||||||||| |||||||    
T  15064943 tggacatgtattttgaaacggagggagtatt 15064973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30734631 - 30734753
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  30734631 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 30734730  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  30734731 atggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 7761428 - 7761300
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||| | |||||||| ||||    
T  7761428 gaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatttctccaaa 7761331  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  7761330 atggacatgtattttgaaacggagggagtat 7761300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 30734771 - 30734881
Alignment:
Q  14 gttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtatt 113  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| | ||| || |||||| ||||||||||||||||||||||||||    
T  30734771 gttaagggtattatagaaaacacacata--atttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtatt 30734868  T
Q  114 ttgaaacggagag 126  Q
    |||||||||||||    
T  30734869 ttgaaacggagag 30734881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8235753 - 8235639
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||||||  |||||||||||||| |||||||||||||    
T  8235753 gaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatttcttcaaa 8235654  T
Q  101 atggacatgtatttt 115  Q
    ||| |||||||||||    
T  8235653 atgtacatgtatttt 8235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17942574 - 17942442
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaat--aacaaaatttattgggtttcttggttactccaatttcttca 98  Q
    ||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||  || ||||  |||| ||||||||||||||| ||||||||  |    
T  17942574 gaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgcaatttctcaa 17942475  T
Q  99 aaatggacatgtattttgaaacggagagagtat 131  Q
    ||||||||||||||||||||||| || ||||||    
T  17942474 aaatggacatgtattttgaaacgaagggagtat 17942442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31559884 - 31559998
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| |||||| |||||||| ||| ||| |||||||||||||||||||||||||| | ||| ||||||| | |||||||| ||||    
T  31559884 gaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaatttctccaaa 31559983  T
Q  101 atggacatgtatttt 115  Q
    |||||||||||||||    
T  31559984 atggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4129556 - 4129435
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||        ||||||||| |||||||| ||||    
T  4129556 gaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttggttactgcaatttctccaaa 4129465  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
     |||| |||||||||||||||||| |||||    
T  4129464 gtggatatgtattttgaaacggagggagta 4129435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 11370635 - 11370711
Alignment:
Q  3 aataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    |||||||||||||||||||||||||| |||| |||||   ||| |||||||||||||||||||||||| | ||||||    
T  11370635 aataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 19996715 - 19996770
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagtatt 19996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3798232 - 3798163
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||  |||| || |||||||||| ||||| |||| ||||| |||||||||||||||||||    
T  3798232 gaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatt 3798163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 21277596 - 21277659
Alignment:
Q  15 ttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttctt 79  Q
    ||||| ||||||||||||| ||||||| | |||||| ||||||||||||||||||| | ||||||    
T  21277596 ttaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 19996363 - 19996321
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||  ||||||||||||||||||||||||||| ||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagtat 19996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14287117 - 14287049
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||| || |||| ||||||||||||| |  || | |||||||| |||||||||||||||||||    
T  14287117 gaaataataaaggggtaagggtattatagaaaaaag-cacagaatttcataaaaaataacaaaatttatt 14287049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 33845471 - 33845500
Alignment:
Q  41 ataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||||||||||||||||    
T  33845471 ataatttcatcaaaaataacaaaatttatt 33845500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 22054800 - 22054772
Alignment:
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||||||||    
T  22054800 tggacatgtattttgaaacggagagagta 22054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10981637 - 10981507
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  10981637 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 10981538  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||||||||||||||||||||| ||||||    
T  10981537 atggacatgtattttgaaacggagggagtat 10981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27813940 - 27813809
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  27813940 gaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 27813841  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||||||||||||||||| |||||||    
T  27813840 atggacatgtattttgaaacggagggagtatt 27813809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 40349089 - 40348967
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||| | |||||||| ||||    
T  40349089 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaa 40348990  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  40348989 atggacatgtattttgaaacgga 40348967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 36453272 - 36453395
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||||||||| |||||||||| ||||||||||||| | |||||||| ||||    
T  36453272 gaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggttagtgcaatttctccaaa 36453371  T
Q  101 atggacatgtattttgaaacggag 124  Q
    ||||||||||||||||||||||||    
T  36453372 atggacatgtattttgaaacggag 36453395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 47110577 - 47110451
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||| | |||||||| |||||    
T  47110577 aaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatttctccaaaa 47110480  T
Q  102 tggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||| |||| |||||    
T  47110479 tggacatgtattttgaaatggagggagta 47110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25614501 - 25614621
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| |||||  |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| | |||||||| ||||    
T  25614501 gaaataataaatgattaagggtatttcagaaaacacacatat--tttcatcaaaaataacaaaatttatttggttttttggttagtgcaatttctccaaa 25614598  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  25614599 atggacatgtattttgaaacgga 25614621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3091646 - 3091577
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  3091646 gaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatt 3091577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16360511 - 16360444
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||||||||| ||||||||||||| ||||  | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaaaaacac--agaatttcatcaaaaataacaaaatttatt 16360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 25060133 - 25060188
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtatt 25060188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27942187 - 27942257
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattg 71  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||| |||| |||||||| |||||||||||    
T  27942187 gaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttattg 27942257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3498902 - 3498967
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatt 66  Q
    |||||||||||||||||| |||||||||||||| | ||| | |||||||| |||||||||||||||    
T  3498902 gaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaatt 3498967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 16662222 - 16662156
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||||||| |||||||| |||| ||||| ||  ||||||||||||||||||||||||||    
T  16662222 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttatt 16662156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 17636582 - 17636516
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||||||| |||||||| |||| ||||| ||  ||||||||||||||||||||||||||    
T  17636582 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttatt 17636516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 2911548 - 2911602
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagtat 2911602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37983281 - 37983206
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttg 80  Q
    ||||||||||||||||||  |||||||| ||||||    || |||||||||||||||||||||||||||| | |||||||    
T  37983281 gaaataataaatggttaaaggtattataaaaaaca----taaaatttcatcaaaaataacaaaatttatttgatttcttg 37983206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7743545 - 7743613
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||  ||||  ||||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  7743545 gaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatt 7743613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 2910900 - 2910858
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagtat 131  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagtat 2910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 25566781 - 25566811
Alignment:
Q  102 tggacatgtattttgaaacggagagagtatt 132  Q
    |||||||||||||||||||||||||||||||    
T  25566781 tggacatgtattttgaaacggagagagtatt 25566811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 25059491 - 25059450
Alignment:
Q  89 aatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||  |||||||||||||||||||||||||||| ||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggagaaagta 25059450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37900772 - 37900902
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||| ||||    
T  37900772 gaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatttctccaaa 37900871  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    |||||  ||||||||||||||||| ||||||    
T  37900872 atggatgtgtattttgaaacggagggagtat 37900902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12807001 - 12807130
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  12807001 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttctccaaa 12807100  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  12807101 atggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 25773778 - 25773649
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||| | |||||||| ||||    
T  25773778 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaa 25773679  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  25773678 atggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 7277570 - 7277688
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  7277570 gaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatttctccaaa 7277669  T
Q  101 atggacatgtattttgaaa 119  Q
    || ||||||||||||||||    
T  7277670 atagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 30720640 - 30720769
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||| ||| ||||| |||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||    
T  30720640 gaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 30720739  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
    |||||||||||||||||||||||| |||||    
T  30720740 atggacatgtattttgaaacggagggagta 30720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10285205 - 10285336
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||| | |||||||| ||||    
T  10285205 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggttaatgcaatttctccaaa 10285304  T
Q  101 atggacatgtattttgaaacggagagagtatt 132  Q
    || ||||| ||||||||||||||| |||||||    
T  10285305 atagacatctattttgaaacggagggagtatt 10285336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36561247 - 36561369
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||| |||||| |  |||    
T  36561247 gaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttttctaaa 36561346  T
Q  101 atggacatgtattttgaaacgga 123  Q
    |||||||||||||||||||||||    
T  36561347 atggacatgtattttgaaacgga 36561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 40886758 - 40886880
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||| | ||||||||||| | |||||||| ||||    
T  40886758 gaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggttagtgcaatttctccaaa 40886857  T
Q  101 atggacatgtattttgaaacgga 123  Q
    ||| |||||||||||||||||||    
T  40886858 atgaacatgtattttgaaacgga 40886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 25683377 - 25683459
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggtta 84  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  25683377 aaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggtta 25683459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 16983380 - 16983257
Alignment:
Q  10 aatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaat--ttattgggtttcttggttactccaatttcttcaaaatggaca 107  Q
    |||||||||| ||||| ||||||| |||||||| ||||||||||||| || ||||   ||||| ||||||||||||||| |||||||| |||||||||||    
T  16983380 aatggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaatttctccaaaatggaca 16983281  T
Q  108 tgtattttgaaacggagagagtat 131  Q
    ||||||||||||| ||| ||||||    
T  16983280 tgtattttgaaacagagggagtat 16983257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 23098386 - 23098505
Alignment:
Q  5 taataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatgg 104  Q
    ||||||||||||||| ||||||||| |||||  || ||||||||||||||||||||||||||||||  ||||||||        |||||||||||| |||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg-------taatttcttcaaattgg 23098478  T
Q  105 acatgtattttgaaacggagagagtatt 132  Q
    ||||||| |||||||||||  |||||||    
T  23098479 acatgta-tttgaaacggatggagtatt 23098505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30403109 - 30403191
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacaca-catataatttcatcaaaaataacaaaatttattgggtttcttggt 82  Q
    ||||||| ||||| ||||||||||||||||||| | | || | |||||||||||||||||||||||||||| |||||||||||    
T  30403109 gaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 734486 - 734608
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  |||| ||||||||||||| ||||| | ||||||||||| ||| |||||||||||| | ||  |||||      ||||||||||||    
T  734486 gaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatttcttcaaa 734584  T
Q  101 atggacatgtattttgaaacggag 124  Q
    ||||||| ||||| ||||||||||    
T  734585 atggacaagtattgtgaaacggag 734608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 11796559 - 11796449
Alignment:
Q  22 tattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaatggacatgtattttgaaacg 121  Q
    |||||||||| | ||||||| |||||||||||||||||||||||| |||   |||||||||  ||  |||||||||||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  122 gagagagtatt 132  Q
    ||| |||||||    
T  11796459 gagggagtatt 11796449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1056430 - 1056498
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    ||||||||||||| | || |||||||||||||| ||||| | |||||||| |||||||||||||||||||    
T  1056430 gaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  81 gttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39071012 - 39070882
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  |||| ||||||||||||| |||||    |||||||||||||| |||| ||||||| | || |||  |   |  ||||||||||||    
T  39071012 gaaataataaatgagtaagggtattatagaaaaaacacaacagatttcatcaaaaatgacaacatttatttgattccttaatatgtgtaatttcttcaaa 39070913  T
Q  101 atggacatgtattttgaaacggagagagtat 131  Q
    ||| ||| ||||| |||||||||| ||||||    
T  39070912 atgaacaagtattgtgaaacggagggagtat 39070882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 16054240 - 16054174
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttatt 70  Q
    |||||||||||||| |||  |||||||||||| ||||| |  ||||||| |||||||||||||||||||    
T  16054240 aaataataaatggtcaaggatattatagaaaaaacacaaa--atttcataaaaaataacaaaatttatt 16054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 3763265 - 3763214
Alignment:
Q  4 ataataaatggttaagagtattatagaaaacacacatataatttcatcaaaa 55  Q
    ||||||||| |||||||||||||||||||| | ||| |||||| ||||||||    
T  3763265 ataataaatagttaagagtattatagaaaaaagacaaataattccatcaaaa 3763214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 11319688 - 11319565
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    |||||||||||||  |||| ||||||||||||| | ||| | |||||||| |||||| |||| ||||||| | ||  || ||   |  ||||||||||||    
T  11319688 gaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatttcttcaaa 11319589  T
Q  101 atggacatgtattttgaaacggag 124  Q
    |||||||  |||| ||||||||||    
T  11319588 atggacaaatattgtgaaacggag 11319565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 45582 - 45453
Alignment:
Q  2 aaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaaa 101  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||  | |||||||| |||||    
T  45582 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatttctccaaaa 45483  T
Q  102 tggacatgtattttgaaacggagagagtat 131  Q
    || |||||||||||||||||||| ||||||    
T  45482 tgaacatgtattttgaaacggagggagtat 45453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 291 - 170
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||        ||||||||| |||||||| ||||    
T  291 gaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttggttactgcaatttctccaaa 200  T
Q  101 atggacatgtattttgaaacggagagagta 130  Q
     |||| |||||||||||||||||| |||||    
T  199 gtggatatgtattttgaaacggagggagta 170  T

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Target: scaffold0062 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 413 - 525
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttggttactccaatttcttcaaa 100  Q
    ||||||||||||| ||||| |||||||| ||||||||||||  |||| |||||||||||||||||||||| | ||| ||| ||||| |||||||  ||||    
T  413 gaaataataaatgattaagggtattataaaaaacacacata--attttatcaaaaataacaaaatttatttgattttttgattactgcaatttcgccaaa 510  T
Q  101 atggacatgtatttt 115  Q
    ||| |||||||||||    
T  511 atgaacatgtatttt 525  T

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Target: scaffold0056 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 70953 - 70874
Alignment:
Q  1 gaaataataaatggttaagagtattatagaaaacacacatataatttcatcaaaaataacaaaatttattgggtttcttg 80  Q
    ||||||||||||||||||| || ||| |||||| ||||| | |||||||||||||||||||||||||||| | |||||||    
T  70953 gaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

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Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 65311 - 65375
Alignment:
Q  1 gaaataataaatggttaagagtattatag-aaaacacacatataatttcatcaaaaataacaaaa 64  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  65311 gaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

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Target: scaffold0257 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  77 cttggttactccaatttcttcaaaatggacatgtattttgaaacggagagagta 130  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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