View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16627_low_20 (Length: 272)

Name: NF16627_low_20
Description: NF16627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16627_low_20
NF16627_low_20
[»] chr1 (24 HSPs)
chr1 (9-255)||(13244269-13244515)
chr1 (12-248)||(13271791-13272027)
chr1 (27-245)||(13080631-13080849)
chr1 (12-248)||(13086312-13086548)
chr1 (12-244)||(19278919-19279151)
chr1 (27-147)||(12963677-12963797)
chr1 (39-161)||(13007489-13007611)
chr1 (56-161)||(13204748-13204853)
chr1 (39-143)||(30367889-30367993)
chr1 (39-161)||(13069957-13070079)
chr1 (42-248)||(13064997-13065200)
chr1 (39-161)||(13101289-13101411)
chr1 (39-160)||(19727443-19727564)
chr1 (42-157)||(13161814-13161929)
chr1 (42-156)||(13130122-13130236)
chr1 (42-157)||(13094692-13094807)
chr1 (39-137)||(13214132-13214230)
chr1 (190-248)||(13101205-13101263)
chr1 (190-248)||(13070105-13070163)
chr1 (190-248)||(13094604-13094662)
chr1 (190-248)||(13130033-13130091)
chr1 (190-248)||(13204664-13204722)
chr1 (190-248)||(12963804-12963862)
chr1 (190-244)||(13161730-13161784)
[»] chr6 (1 HSPs)
chr6 (39-162)||(31396456-31396580)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 255
Target Start/End: Original strand, 13244269 - 13244515
Alignment:
Q  9 atcagagacactgcggtaaatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtgg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13244269 atcagagacactgcggtaaatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgggg 13244368  T
Q  109 aagcgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttacct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  13244369 aagcgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttaatcaataatttaaacgtggaaaagattgataagcttgtttacct 13244468  T
Q  209 tcatggagccatatgtgaaaccttgaggctatatcctcctctggcat 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13244469 tcatggagccatatgtgaaaccttgaggctatatcctcctctggcat 13244515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 12 - 248
Target Start/End: Complemental strand, 13272027 - 13271791
Alignment:
Q  12 agagacactgcggtaaatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaag 111  Q
    |||||||||||  | | |||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13272027 agagacactgcattcactctcttggctgcaggaaatggaacagttagttcaggtctaagttggttcttttggcttgtttcaactcatcctaatgtggaag 13271928  T
Q  112 cgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttaccttca 211  Q
    | ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||  ||||||||||    
T  13271927 caaaacttattcaagagatcaaagatcattgtctaacacaagaggagaatttgatcaataatttaaatgttgaaaacattgataagctgatttaccttca 13271828  T
Q  212 tggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    || ||| ||||||||||||||||| || |||||||||    
T  13271827 tgcagctatatgtgaaaccttgagactttatcctcct 13271791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 13080631 - 13080849
Alignment:
Q  27 aatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaag 126  Q
    |||||||| | |||||||||||||||||||||| ||||||| | |||||| |||||||| |||||||| |||||||  || || |  |||||||||||||    
T  13080631 aatctcttggttgcaggaaatggaacaattagtacaggtctcacttggtttttttggctggtttcaacgcatcctagggtagatggtaaaattattcaag 13080730  T
Q  127 agatcaaagataattgtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttaccttcatggagccatatgtga 226  Q
    ||||||||||||||||| ||| ||| || |||||||| |||| |||||||   |||||| || |||||||||| ||||||||||||||||||||||||||    
T  13080731 agatcaaagataattgtttaaaacacgatgagaattttatcgctaatttaggtgtggaagagcttgataagctagtttaccttcatggagccatatgtga 13080830  T
Q  227 aaccttgaggctatatcct 245  Q
    | |||| ||||||||||||    
T  13080831 agccttaaggctatatcct 13080849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 248
Target Start/End: Complemental strand, 13086548 - 13086312
Alignment:
Q  12 agagacactgcggtaaatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaag 111  Q
    |||||||||||  | |||||||| | |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||   || |||||||    
T  13086548 agagacactgcattcaatctcttagctgcaggaagtggaacagttagttcaggtctaagttggttctcttggcttgtttcaactcatttcatagtggaag 13086449  T
Q  112 cgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttaccttca 211  Q
    | ||||| ||||||||||| ||||||||||||||| |||| ||||| |||||| ||  ||||||||  || |||||| || |||| || || ||||||||    
T  13086448 ctaaaataattcaagagataaaagataattgtctatcacatgaggataatttggtcactaatttaagagttgaaaagcttaataaactagtgtaccttca 13086349  T
Q  212 tggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||| ||||||||| | |||||||| |||||||||    
T  13086348 tggagctatatgtgaagcattgaggctttatcctcct 13086312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 19278919 - 19279151
Alignment:
Q  12 agagacactgcggtaaatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaag 111  Q
    |||||||||||  | |||||||| | |||||| ||||||||||||||||| ||||| | ||||||||||||||| || ||||||||||||||||| ||||    
T  19278919 agagacactgctctcaatctcttggctgcaggtaatggaacaattagttcgggtctcaattggttcttttggctcgtatcaactcatcctattgtcgaag 19279018  T
Q  112 cgaaaattattcaagagatcaaagataattgtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttaccttca 211  Q
    | |||||||||||||||||||| | ||| ||| ||||| ||||||| |||||||||   ||||| |  ||| || || |||||||||| ||||| |||||    
T  19279019 caaaaattattcaagagatcaaggttaactgtttaacaaaagaggataatttgatcacaaattttagtgtgaaagagcttgataagctagtttatcttca 19279118  T
Q  212 tggagccatatgtgaaaccttgaggctatatcc 244  Q
    |||||| ||||||||| |||| ||||| |||||    
T  19279119 tggagctatatgtgaagccttaaggctttatcc 19279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 12963677 - 12963797
Alignment:
Q  27 aatctcttcggtgcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaag 126  Q
    |||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  12963677 aatctcttagctgcaggaagtggaacagttagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaaactaaaattattcaag 12963776  T
Q  127 agatcaaagataattgtctaa 147  Q
    |||| |||||||||| |||||    
T  12963777 agattaaagataattttctaa 12963797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 13007611 - 13007489
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagata 138  Q
    ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  13007611 gcaggaaatggcacaattagttcaggtctcagttggtttttctggcttgtttcaactcatcctattgtggaagccaaaattattcaagaaatcaaagata 13007512  T
Q  139 attgtctaacacaagaggagaat 161  Q
    | || |  |||||||||||||||    
T  13007511 actggcccacacaagaggagaat 13007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 13204853 - 13204748
Alignment:
Q  56 tagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagataattgtctaacacaagag 155  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||  |||||||||    
T  13204853 tagttcaggtctaagttggtttttttggcttgtttccactcatcctattgtggaagccaaaataattcaagaaatcaaagataactgtcctacacaagag 13204754  T
Q  156 gagaat 161  Q
    ||||||    
T  13204753 gagaat 13204748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 30367889 - 30367993
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagata 138  Q
    ||||| ||||| ||| |||||||| |||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30367889 gcaggtaatggcacacttagttcaagtctcagttggtttttctggcttgtttcaactcatcctattgtggaagccaaaattattcaagagatcaaagata 30367988  T
Q  139 attgt 143  Q
    |||||    
T  30367989 attgt 30367993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 13069957 - 13070079
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagata 138  Q
    ||||||||||| ||| ||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  13069957 gcaggaaatggcacagttacttcaggtctcagttggtttttctggcttgtttcaactcatcctattgtggaagccaaaattattcaagaaataaaagata 13070056  T
Q  139 attgtctaacacaagaggagaat 161  Q
    | || |  |||||||||||||||    
T  13070057 actggcccacacaagaggagaat 13070079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 248
Target Start/End: Original strand, 13064997 - 13065200
Alignment:
Q  42 ggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagataatt 141  Q
    ||||| || ||| ||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||| || |||||||||||||| ||||||||||    
T  13064997 ggaaacggcacagttagttcaggtctcagttggttcttttggcttgtttcatgtcatcctgttgtggaagccaagattattcaagagatgaaagataatt 13065096  T
Q  142 gtctaacacaagaggagaatttgatcgataatttaaacgtggaaaagattgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctata 241  Q
    ||||| |  | || || || |||||   || || ||  ||||||||| ||||||| ||  ||||||| || ||||| ||||||||| |||| ||||| ||    
T  13065097 gtctatctgatgatgaaaacttgat---tacttcaattgtggaaaagcttgataaactaatttacctccacggagctatatgtgaagccttaaggcttta 13065193  T
Q  242 tcctcct 248  Q
    |||||||    
T  13065194 tcctcct 13065200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 13101411 - 13101289
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagata 138  Q
    |||||||||||  || ||||||||| ||| |||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||    
T  13101411 gcaggaaatggcccagttagttcagctctcagttggtttttctggcttgtttccactcatcctattgtggaagccaaaataattcaagaaatcaaagata 13101312  T
Q  139 attgtctaacacaagaggagaat 161  Q
    | ||||  |||||||||||||||    
T  13101311 actgtcctacacaagaggagaat 13101289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 19727564 - 19727443
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagata 138  Q
    |||||||||||  || ||||| ||||||| |||||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19727564 gcaggaaatggcccagttagtacaggtctcagttggtttttttggcttgtttcgactcatcctattgtcgaagccaaaattattcaagaaatcaaagata 19727465  T
Q  139 attgtctaacacaagaggagaa 160  Q
    | || |  ||||||||||||||    
T  19727464 actggcccacacaagaggagaa 19727443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 13161929 - 13161814
Alignment:
Q  42 ggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagataatt 141  Q
    ||||||||  |||||||||||| ||| |||||||| || |||||  |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  13161929 ggaaatggttcaattagttcagctctcagttggtttttctggctcctttcaacttatcctattgtggaagaaaaaatcattcaagagatcaaagataatt 13161830  T
Q  142 gtctaacacaagagga 157  Q
    | ||||||||||||||    
T  13161829 ggctaacacaagagga 13161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 13130236 - 13130122
Alignment:
Q  42 ggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagataatt 141  Q
    ||||||||  |||||||||||| ||| |||||||| || |||||| |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  13130236 ggaaatggttcaattagttcagctctcagttggtttttctggcttctttcaacttatcctattgtggaagaaaaaatcattcaagagatcaaagataatt 13130137  T
Q  142 gtctaacacaagagg 156  Q
    |  ||||||||||||    
T  13130136 ggttaacacaagagg 13130122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 13094807 - 13094692
Alignment:
Q  42 ggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagataatt 141  Q
    |||||||| ||||||||||||| ||| |||||||| || |||||| |||||||| |||||||||||||||  ||||| ||||||||||||| ||||||||    
T  13094807 ggaaatggtacaattagttcagctctcagttggtttttctggcttctttcaacttatcctattgtggaagaaaaaatcattcaagagatcagagataatt 13094708  T
Q  142 gtctaacacaagagga 157  Q
    |  |||||| ||||||    
T  13094707 ggttaacacgagagga 13094692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 13214230 - 13214132
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgtttcaactcatcctattgtggaagcgaaaattattcaagagatcaaagat 137  Q
    |||||||||||  || || |||||||||| | |||||| || ||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||    
T  13214230 gcaggaaatggcccagttcgttcaggtctcatttggtttttctggcttgtttcaactcatcttattgtggaagctaaaattattcaagaaataaaagat 13214132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 13101263 - 13101205
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||||||| || ||||| |||||||| |||||||||||||||||||| |||||||||    
T  13101263 ttgataagctagtgtacctccatggagctatatgtgaaaccttgaggctttatcctcct 13101205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 13070105 - 13070163
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    ||||||| || || |||||||||||||| ||||||||||||||||| || |||||||||    
T  13070105 ttgataatctagtgtaccttcatggagctatatgtgaaaccttgagactttatcctcct 13070163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 13094662 - 13094604
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||||||| || ||||| |||||||| |||||||||||||| ||||| |||||||||    
T  13094662 ttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatcctcct 13094604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 13130091 - 13130033
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||||||| || ||||| |||||||| |||||||||||||| ||||| |||||||||    
T  13130091 ttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatcctcct 13130033  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 13204722 - 13204664
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||||||| || |||||||||||||| ||||||||| ||||||| || |||||||||    
T  13204722 ttgataagctagtgtaccttcatggagctatatgtgaagccttgagactttatcctcct 13204664  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 12963804 - 12963862
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcctcct 248  Q
    |||||||||||||||| ||||||||||| || |||||| | || ||||| |||||||||    
T  12963804 ttgataagcttgtttatcttcatggagctatttgtgaagctttaaggctttatcctcct 12963862  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 13161784 - 13161730
Alignment:
Q  190 ttgataagcttgtttaccttcatggagccatatgtgaaaccttgaggctatatcc 244  Q
    |||||||||| || ||||| |||||||| |||||||||||||| ||||| |||||    
T  13161784 ttgataagctagtatacctccatggagctatatgtgaaaccttaaggctttatcc 13161730  T

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Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 162
Target Start/End: Original strand, 31396456 - 31396580
Alignment:
Q  39 gcaggaaatggaacaattagttcaggtctaagttggttcttttggcttgttt-caactcatcctattgtggaagcgaaaattattcaagagatcaaagat 137  Q
    ||||||||||| |||||||||||| ||||  ||||||| || |||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||    
T  31396456 gcaggaaatggcacaattagttcaagtctcggttggtttttctggcttgttttcaactcatcctaatgtggaagccaaaattattcaagagattcaagat 31396555  T
Q  138 aattgtctaacacaagaggagaatt 162  Q
    || |||| ||| ||| | |||||||    
T  31396556 aactgtcaaacccaacatgagaatt 31396580  T

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