View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16628_low_16 (Length: 265)
Name: NF16628_low_16
Description: NF16628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16628_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 7909064 - 7908810
Alignment:
| Q |
1 |
acattagtttgatatttgattggttctgttggagaattctagtttggttggttgatctagttggttgtgaaaatttggattgttcttgttggaaataata |
100 |
Q |
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| T |
7909064 |
acattagtttgatatttgattggttctgttggagaattctagtttggttggttgatctagttggttgtgaaaatttggattgttcttgttggaaataata |
7908965 |
T |
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| Q |
101 |
tggctaacgaaggaaacaaaagcaatgatttctatgcagttttgggattgaataaggaatgctctgattcagagctaaggaatgcttataagaaacttgc |
200 |
Q |
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| T |
7908964 |
tggctaacgaaggaaacaaaagcaatgatttctatgcagttttgggattgaataaggaatgctctgattcagagctaaggaatgcttataagaaacttgc |
7908865 |
T |
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| Q |
201 |
actggttagaaatgcttatattttctataatctttttctttctacaccgtctctg |
255 |
Q |
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| T |
7908864 |
actggttagaaatgcttatactttctataatctttttctttctacaccgtctctg |
7908810 |
T |
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