View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_high_18 (Length: 454)
Name: NF16629_high_18
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 36929498 - 36929899
Alignment:
| Q |
11 |
cacagaacaacgtttacaaacctcattgaagttgttgaatggaaataattttacctgcaaatgacttttaacatgggaaatggatagcaaatttgatttc |
110 |
Q |
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| T |
36929498 |
cacagaacaacgtttacaaacctcattgaaattgttgaatggaaataattttacctgcaaatgacttttaacatgggaaatggatagcaaatttgatttc |
36929597 |
T |
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| Q |
111 |
atcatatctagtatagccttaggctttgcctctgcaattataatcaatgaattaattgaatttgcttatgagtaactaatgctattacttagtagttaat |
210 |
Q |
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| T |
36929598 |
atcatatctagtatagccttaggctttgcctctgcaattataatcaatgaattaattgaattttcttatgtgtaactaatgctattacttagtagttaat |
36929697 |
T |
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| Q |
211 |
tacttactttctggaccaccaaggtgatcaacgatgatcatgaatgattcatgcagatcctctgtccatcttactcttcttttacatgttggagctttcc |
310 |
Q |
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| T |
36929698 |
tacttactttctggaccaccaaggtgatcaacgatgatcatgaatgattcatgcagatcctctgtccatcttactcttcttttacatgttggagctttcc |
36929797 |
T |
|
| Q |
311 |
tgttagaagtggcacacattccataaagttgaggagtctgcttttgtgactttgtagatgagcctgactatagaaagtcatggattgtagcttattagaa |
410 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36929798 |
tgttagaagtggcacacattccataaagttgaggagtctgcttttgtgattttgtagatgagcctgactatagaaagtcatggattgtagcttattagaa |
36929897 |
T |
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| Q |
411 |
ag |
412 |
Q |
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|| |
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| T |
36929898 |
ag |
36929899 |
T |
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