View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_high_49 (Length: 260)
Name: NF16629_high_49
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 38559613 - 38559842
Alignment:
| Q |
15 |
gaagatgaaaattgcaagctatgaagttaaagtgggagagggtgaatggccaaaatggctagttgataatatctccgaagacgttttggctactttgatt |
114 |
Q |
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| T |
38559613 |
gaagatgaaaattgcaagctatgaagttaaagtgggagagggtgaatggccaaaatggctagttgataatatctctgaagacgttttggctactttgatt |
38559712 |
T |
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| Q |
115 |
cgtaagactgctgattcatatgaaaaactaggaaaggtaagcaccaacactatctatactagatatatttttatcatcaagttttatatgaaccaatgtt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38559713 |
cgtaagactgctgattcatatgaaaaactaggaaaggtaagcaccaacactatctatactagatatatttttatcatcaagttttatatgaaccaatgtt |
38559812 |
T |
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| Q |
215 |
ttaaaaaccaaactgaatggaactaattaa |
244 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
38559813 |
ttaaaaaccaaactgaatggaactaattaa |
38559842 |
T |
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