View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_high_50 (Length: 258)
Name: NF16629_high_50
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_high_50 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 35384008 - 35383747
Alignment:
| Q |
1 |
ctatagatcaagaatcatcatggacattaaacttaaaggcctttgctaataccctagctgtgcaattacctagataacgatatcaaccaatgcttaactt |
100 |
Q |
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| T |
35384008 |
ctatagatcaagaatcatcatggtcattaaacttaaaggcctttgctaataccctagctgtgcaattacctagataacgatatcaaccaatgcttaactt |
35383909 |
T |
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| Q |
101 |
gttcataaccttactcatactttggagggtataagagttataaacaacaaaaagctccctttaacttgtgacaaaactgcaattagtctccctcaagatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
35383908 |
gttcataaccttactcatactttggagggtataagagttataaacaacaaaaagctccctttaacttgtgacaaaactgtaattagtctccctcaagatc |
35383809 |
T |
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| Q |
201 |
acacacatgc----taagagataatggagagaatgagaagagaggaaaagaaaagtaaaaac |
258 |
Q |
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|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
35383808 |
acacacatgctaattaagagataatggagagaatgagaagagaagaaaagaaaagtaaaaac |
35383747 |
T |
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