View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16629_high_63 (Length: 228)

Name: NF16629_high_63
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16629_high_63
NF16629_high_63
[»] chr3 (86 HSPs)
chr3 (1-172)||(41933250-41933421)
chr3 (28-172)||(26898218-26898362)
chr3 (1-172)||(7910131-7910302)
chr3 (24-172)||(9301033-9301181)
chr3 (28-172)||(55423716-55423860)
chr3 (21-172)||(26823011-26823162)
chr3 (28-172)||(1694978-1695122)
chr3 (28-172)||(1842538-1842682)
chr3 (30-172)||(43087971-43088113)
chr3 (28-172)||(10804509-10804653)
chr3 (28-172)||(31412107-31412250)
chr3 (28-172)||(50155517-50155661)
chr3 (1-164)||(33911628-33911791)
chr3 (28-171)||(39095227-39095370)
chr3 (28-172)||(54313318-54313462)
chr3 (24-156)||(14741005-14741137)
chr3 (28-172)||(41879387-41879531)
chr3 (1-172)||(3995001-3995172)
chr3 (29-158)||(33215392-33215521)
chr3 (28-172)||(32774414-32774558)
chr3 (1-172)||(3974705-3974876)
chr3 (1-163)||(17525302-17525463)
chr3 (24-172)||(51744103-51744252)
chr3 (29-158)||(51885297-51885426)
chr3 (28-158)||(7399701-7399832)
chr3 (29-172)||(42480988-42481131)
chr3 (1-158)||(29522785-29522942)
chr3 (1-172)||(49318276-49318447)
chr3 (1-138)||(10267812-10267949)
chr3 (32-172)||(24570265-24570405)
chr3 (32-138)||(15489084-15489190)
chr3 (32-172)||(1557332-1557471)
chr3 (16-172)||(35603810-35603966)
chr3 (1-172)||(1460258-1460429)
chr3 (1-158)||(12768573-12768730)
chr3 (28-172)||(36638097-36638241)
chr3 (32-171)||(44845231-44845370)
chr3 (28-172)||(44310251-44310395)
chr3 (104-171)||(28816103-28816170)
chr3 (28-158)||(53468080-53468209)
chr3 (1-156)||(39620447-39620602)
chr3 (28-146)||(28970565-28970683)
chr3 (28-134)||(41209396-41209501)
chr3 (18-105)||(49506124-49506211)
chr3 (115-172)||(15646479-15646536)
chr3 (28-70)||(27182399-27182441)
chr3 (28-70)||(30105825-30105867)
chr3 (193-225)||(32963117-32963149)
chr3 (197-228)||(43868100-43868131)
chr3 (194-228)||(14428878-14428912)
chr3 (197-227)||(23700795-23700825)
chr3 (197-227)||(23719250-23719280)
chr3 (197-227)||(23737706-23737736)
chr3 (199-228)||(7181349-7181378)
chr3 (199-228)||(12050401-12050430)
chr3 (199-228)||(20862466-20862495)
chr3 (199-228)||(22103938-22103967)
chr3 (195-228)||(22832616-22832649)
chr3 (199-228)||(25149131-25149160)
chr3 (197-226)||(26221285-26221314)
chr3 (199-228)||(26806114-26806143)
chr3 (199-228)||(33868717-33868746)
chr3 (199-228)||(35868092-35868121)
chr3 (199-228)||(37728712-37728741)
chr3 (199-228)||(44543781-44543810)
chr3 (199-228)||(50647683-50647712)
chr3 (199-228)||(51284071-51284100)
chr3 (197-226)||(53271862-53271891)
chr3 (200-228)||(4024052-4024080)
chr3 (200-228)||(4024320-4024348)
chr3 (200-228)||(7251291-7251319)
chr3 (200-228)||(9499506-9499534)
chr3 (200-228)||(9779979-9780007)
chr3 (197-225)||(10044839-10044867)
chr3 (200-228)||(10220933-10220961)
chr3 (200-228)||(14428610-14428638)
chr3 (200-228)||(16434977-16435005)
chr3 (200-228)||(21756486-21756514)
chr3 (200-228)||(26593774-26593802)
chr3 (200-228)||(31531420-31531448)
chr3 (197-225)||(33868445-33868473)
chr3 (200-228)||(36005773-36005801)
chr3 (200-228)||(45252773-45252801)
chr3 (200-228)||(46049995-46050023)
chr3 (200-228)||(52058985-52059013)
chr3 (199-227)||(53361865-53361893)
[»] chr1 (74 HSPs)
chr1 (1-172)||(5114878-5115049)
chr1 (28-172)||(30723300-30723444)
chr1 (1-172)||(40601710-40601881)
chr1 (1-172)||(44372860-44373031)
chr1 (1-172)||(48812516-48812687)
chr1 (1-172)||(19406619-19406790)
chr1 (28-172)||(41310505-41310649)
chr1 (29-172)||(39995436-39995579)
chr1 (29-172)||(1858752-1858895)
chr1 (1-158)||(28199190-28199347)
chr1 (29-172)||(48913581-48913724)
chr1 (28-172)||(35985469-35985613)
chr1 (29-158)||(47034514-47034643)
chr1 (1-172)||(699880-700051)
chr1 (1-172)||(44922164-44922335)
chr1 (1-172)||(50511957-50512128)
chr1 (1-147)||(42102163-42102308)
chr1 (29-172)||(33814903-33815045)
chr1 (29-172)||(33874373-33874515)
chr1 (29-155)||(38235638-38235764)
chr1 (1-172)||(40412495-40412666)
chr1 (24-158)||(45826663-45826797)
chr1 (36-172)||(25423271-25423407)
chr1 (29-171)||(48605821-48605962)
chr1 (28-158)||(48940807-48940937)
chr1 (41-158)||(20722202-20722319)
chr1 (45-170)||(21088508-21088633)
chr1 (28-172)||(23974159-23974302)
chr1 (28-172)||(45794063-45794203)
chr1 (1-112)||(52929451-52929562)
chr1 (29-114)||(39003048-39003133)
chr1 (28-172)||(343113-343242)
chr1 (66-172)||(21719945-21720051)
chr1 (28-102)||(46868747-46868821)
chr1 (60-157)||(25155740-25155837)
chr1 (60-138)||(27414061-27414139)
chr1 (29-172)||(6715105-6715247)
chr1 (64-158)||(50863858-50863952)
chr1 (99-172)||(12255175-12255248)
chr1 (125-172)||(46868829-46868876)
chr1 (196-228)||(1047988-1048020)
chr1 (197-228)||(4102723-4102754)
chr1 (193-228)||(8104297-8104332)
chr1 (188-226)||(16576103-16576140)
chr1 (198-228)||(39362932-39362962)
chr1 (198-228)||(39750119-39750149)
chr1 (198-228)||(52431183-52431213)
chr1 (198-228)||(52601989-52602019)
chr1 (199-228)||(9202244-9202273)
chr1 (199-228)||(11741396-11741425)
chr1 (192-225)||(24190650-24190683)
chr1 (199-228)||(37951958-37951987)
chr1 (199-228)||(38920238-38920267)
chr1 (199-228)||(39497432-39497461)
chr1 (199-228)||(45039411-45039440)
chr1 (143-172)||(52929413-52929442)
chr1 (200-228)||(943646-943674)
chr1 (200-228)||(1039390-1039418)
chr1 (200-228)||(1046296-1046324)
chr1 (200-228)||(15811241-15811269)
chr1 (200-228)||(16456636-16456664)
chr1 (200-228)||(23541979-23542007)
chr1 (200-228)||(23542248-23542276)
chr1 (200-228)||(30290265-30290293)
chr1 (200-228)||(36694854-36694882)
chr1 (200-228)||(36710955-36710983)
chr1 (200-228)||(39363203-39363231)
chr1 (200-228)||(39497702-39497730)
chr1 (200-228)||(44646540-44646568)
chr1 (200-228)||(44649629-44649657)
chr1 (200-228)||(44649898-44649926)
chr1 (200-228)||(46075876-46075904)
chr1 (200-228)||(49907021-49907049)
chr1 (197-225)||(50008495-50008523)
[»] chr8 (71 HSPs)
chr8 (1-172)||(6266245-6266416)
chr8 (1-172)||(5927052-5927223)
chr8 (29-172)||(11202155-11202298)
chr8 (1-172)||(24101721-24101892)
chr8 (28-172)||(26098274-26098418)
chr8 (28-172)||(41827527-41827671)
chr8 (19-172)||(40027736-40027889)
chr8 (28-172)||(37819212-37819356)
chr8 (21-172)||(28994756-28994905)
chr8 (31-172)||(14615550-14615691)
chr8 (1-158)||(41395785-41395942)
chr8 (32-172)||(7161575-7161715)
chr8 (28-172)||(24476356-24476500)
chr8 (29-172)||(38231701-38231844)
chr8 (28-171)||(42935752-42935894)
chr8 (18-172)||(15041326-15041480)
chr8 (1-158)||(31894922-31895078)
chr8 (28-172)||(41644150-41644294)
chr8 (32-171)||(27639993-27640132)
chr8 (18-172)||(21412435-21412589)
chr8 (18-172)||(21806927-21807081)
chr8 (32-172)||(7433414-7433554)
chr8 (1-171)||(20823477-20823647)
chr8 (29-158)||(37255569-37255698)
chr8 (28-156)||(44679145-44679273)
chr8 (29-171)||(29940068-29940210)
chr8 (15-171)||(7764325-7764481)
chr8 (28-164)||(40027534-40027670)
chr8 (1-172)||(356418-356589)
chr8 (18-172)||(32018318-32018472)
chr8 (1-131)||(38894689-38894819)
chr8 (51-154)||(43067084-43067187)
chr8 (28-172)||(5924532-5924661)
chr8 (1-138)||(5913268-5913405)
chr8 (29-138)||(22487330-22487439)
chr8 (72-158)||(957506-957592)
chr8 (119-172)||(18654488-18654541)
chr8 (35-130)||(34347019-34347114)
chr8 (1-172)||(23192848-23193019)
chr8 (103-172)||(30874177-30874246)
chr8 (1-89)||(32925404-32925492)
chr8 (28-76)||(20983839-20983887)
chr8 (196-228)||(29279465-29279497)
chr8 (192-228)||(32675766-32675802)
chr8 (197-228)||(17856785-17856816)
chr8 (198-228)||(18754142-18754172)
chr8 (198-228)||(26016567-26016597)
chr8 (198-228)||(40530415-40530445)
chr8 (195-228)||(5593416-5593449)
chr8 (199-228)||(8251942-8251971)
chr8 (199-228)||(13153927-13153956)
chr8 (199-228)||(28572045-28572074)
chr8 (199-228)||(28579638-28579667)
chr8 (199-228)||(34568489-34568518)
chr8 (198-227)||(40741534-40741563)
chr8 (199-228)||(44250858-44250887)
chr8 (200-228)||(51104-51132)
chr8 (200-228)||(1774342-1774370)
chr8 (196-228)||(2152249-2152281)
chr8 (200-228)||(2944281-2944309)
chr8 (200-228)||(8951437-8951465)
chr8 (200-228)||(11798874-11798902)
chr8 (200-228)||(13154197-13154225)
chr8 (200-228)||(18455720-18455748)
chr8 (199-227)||(26990566-26990594)
chr8 (200-228)||(28192184-28192212)
chr8 (196-228)||(28965736-28965768)
chr8 (200-228)||(29279195-29279223)
chr8 (200-228)||(39029178-39029206)
chr8 (200-228)||(42885054-42885082)
chr8 (200-228)||(43653943-43653971)
[»] chr4 (78 HSPs)
chr4 (1-172)||(56264379-56264550)
chr4 (29-172)||(6643269-6643412)
chr4 (18-172)||(53724853-53725007)
chr4 (18-171)||(401334-401487)
chr4 (28-172)||(35392748-35392892)
chr4 (28-172)||(50097395-50097539)
chr4 (29-172)||(15194480-15194623)
chr4 (1-171)||(53925315-53925485)
chr4 (19-172)||(51435550-51435703)
chr4 (28-172)||(26706883-26707027)
chr4 (28-172)||(54093962-54094106)
chr4 (1-172)||(19823619-19823790)
chr4 (28-172)||(24678272-24678416)
chr4 (32-172)||(39240400-39240540)
chr4 (28-172)||(39809594-39809738)
chr4 (1-158)||(40731191-40731348)
chr4 (28-158)||(35666583-35666713)
chr4 (28-172)||(19521739-19521883)
chr4 (28-172)||(30000248-30000392)
chr4 (28-172)||(16623462-16623606)
chr4 (28-172)||(34435894-34436037)
chr4 (1-158)||(1138978-1139135)
chr4 (28-158)||(18861623-18861751)
chr4 (29-172)||(56114169-56114312)
chr4 (19-172)||(44871486-44871639)
chr4 (24-172)||(41140601-41140749)
chr4 (28-172)||(13563374-13563506)
chr4 (1-172)||(48152691-48152847)
chr4 (28-138)||(36694112-36694222)
chr4 (28-169)||(19474665-19474806)
chr4 (28-171)||(41883116-41883259)
chr4 (29-172)||(56519969-56520111)
chr4 (28-172)||(32555678-32555822)
chr4 (30-158)||(33493102-33493230)
chr4 (62-172)||(49480751-49480861)
chr4 (30-169)||(45849299-45849438)
chr4 (28-172)||(52278776-52278919)
chr4 (28-172)||(41831205-41831349)
chr4 (19-106)||(51031641-51031728)
chr4 (28-172)||(4709252-4709381)
chr4 (19-95)||(42248053-42248129)
chr4 (18-113)||(6366349-6366444)
chr4 (65-156)||(24534651-24534741)
chr4 (1-172)||(16346855-16347011)
chr4 (47-158)||(42587327-42587438)
chr4 (101-172)||(48500306-48500377)
chr4 (18-158)||(31616494-31616634)
chr4 (55-158)||(35013830-35013933)
chr4 (24-103)||(40226904-40226983)
chr4 (197-228)||(4035822-4035853)
chr4 (122-172)||(8907050-8907100)
chr4 (199-228)||(20747439-20747468)
chr4 (196-225)||(24754074-24754103)
chr4 (199-228)||(45742815-45742844)
chr4 (200-228)||(4036094-4036122)
chr4 (200-228)||(4549629-4549657)
chr4 (200-228)||(5375566-5375594)
chr4 (200-228)||(5743668-5743696)
chr4 (200-228)||(9328249-9328277)
chr4 (200-228)||(20391446-20391474)
chr4 (196-228)||(20455190-20455222)
chr4 (196-228)||(21265216-21265248)
chr4 (200-228)||(25708420-25708448)
chr4 (200-228)||(26626011-26626039)
chr4 (200-228)||(29014064-29014092)
chr4 (200-228)||(30771528-30771556)
chr4 (128-160)||(31290614-31290646)
chr4 (200-228)||(32033002-32033030)
chr4 (35-158)||(32767598-32767722)
chr4 (200-228)||(33413518-33413546)
chr4 (200-228)||(34273228-34273256)
chr4 (200-228)||(35675929-35675957)
chr4 (195-227)||(39797429-39797461)
chr4 (200-228)||(44294789-44294817)
chr4 (200-228)||(47806860-47806888)
chr4 (200-228)||(52977982-52978010)
chr4 (200-228)||(53277194-53277222)
chr4 (200-228)||(55631999-55632027)
[»] chr2 (65 HSPs)
chr2 (28-172)||(1346246-1346390)
chr2 (1-172)||(27495855-27496026)
chr2 (1-172)||(31742851-31743022)
chr2 (28-172)||(1002473-1002617)
chr2 (28-172)||(10261308-10261452)
chr2 (30-172)||(35439504-35439646)
chr2 (18-158)||(36240734-36240874)
chr2 (1-172)||(30555614-30555785)
chr2 (1-172)||(31618062-31618233)
chr2 (32-170)||(28222916-28223054)
chr2 (18-158)||(29810705-29810845)
chr2 (28-172)||(45517162-45517306)
chr2 (1-172)||(12847831-12848002)
chr2 (28-158)||(10440139-10440269)
chr2 (43-172)||(38962213-38962342)
chr2 (28-172)||(10822246-10822390)
chr2 (1-172)||(26984434-26984605)
chr2 (28-158)||(13247727-13247857)
chr2 (28-158)||(30016206-30016336)
chr2 (18-172)||(42799504-42799657)
chr2 (1-158)||(27551946-27552103)
chr2 (24-172)||(23334041-23334189)
chr2 (28-172)||(30801174-30801318)
chr2 (42-172)||(2650055-2650186)
chr2 (21-172)||(34313729-34313880)
chr2 (1-172)||(41644263-41644434)
chr2 (18-158)||(18258032-18258172)
chr2 (29-172)||(25868901-25869044)
chr2 (28-172)||(2557655-2557799)
chr2 (24-172)||(19944766-19944914)
chr2 (24-172)||(37209506-37209654)
chr2 (31-158)||(13311525-13311652)
chr2 (55-172)||(27258811-27258928)
chr2 (28-172)||(10709745-10709889)
chr2 (28-172)||(20932462-20932597)
chr2 (19-138)||(12017480-12017599)
chr2 (18-138)||(37208889-37209009)
chr2 (1-128)||(9439274-9439401)
chr2 (195-228)||(20252205-20252238)
chr2 (197-228)||(41450513-41450544)
chr2 (198-228)||(16108213-16108243)
chr2 (198-228)||(34062674-34062704)
chr2 (198-228)||(39833737-39833767)
chr2 (195-228)||(4711723-4711756)
chr2 (199-228)||(11201682-11201711)
chr2 (191-224)||(11617210-11617243)
chr2 (199-228)||(22182933-22182962)
chr2 (199-228)||(34883857-34883886)
chr2 (199-228)||(40607701-40607730)
chr2 (198-226)||(1360062-1360090)
chr2 (196-228)||(2199974-2200006)
chr2 (200-228)||(2438225-2438253)
chr2 (200-228)||(2438494-2438522)
chr2 (199-227)||(5664637-5664665)
chr2 (200-228)||(7491844-7491872)
chr2 (200-228)||(7492113-7492141)
chr2 (200-228)||(8716901-8716929)
chr2 (200-228)||(17408303-17408331)
chr2 (200-228)||(22897660-22897688)
chr2 (198-226)||(23789240-23789268)
chr2 (199-227)||(25624732-25624760)
chr2 (200-228)||(27560206-27560234)
chr2 (200-228)||(34113795-34113823)
chr2 (200-228)||(36131037-36131065)
chr2 (200-228)||(45474351-45474379)
[»] chr7 (68 HSPs)
chr7 (1-172)||(37471491-37471662)
chr7 (1-172)||(32795687-32795858)
chr7 (19-172)||(36992158-36992311)
chr7 (28-172)||(34202628-34202771)
chr7 (28-172)||(555728-555872)
chr7 (28-172)||(39560505-39560649)
chr7 (29-172)||(8613754-8613897)
chr7 (1-172)||(24764164-24764335)
chr7 (1-158)||(47761670-47761827)
chr7 (28-172)||(29507945-29508089)
chr7 (29-168)||(3699181-3699320)
chr7 (1-172)||(37085730-37085901)
chr7 (1-171)||(35528351-35528521)
chr7 (18-172)||(30072015-30072169)
chr7 (28-172)||(5215691-5215835)
chr7 (28-172)||(33889216-33889360)
chr7 (1-172)||(13598046-13598217)
chr7 (32-172)||(32527976-32528115)
chr7 (28-172)||(9696997-9697129)
chr7 (24-158)||(47099150-47099284)
chr7 (1-154)||(8781458-8781611)
chr7 (1-158)||(17195484-17195641)
chr7 (21-138)||(33590279-33590396)
chr7 (28-172)||(42976701-42976845)
chr7 (1-171)||(33626898-33627068)
chr7 (36-172)||(3319007-3319143)
chr7 (28-172)||(15457160-15457303)
chr7 (28-172)||(31325370-31325514)
chr7 (1-122)||(40685628-40685749)
chr7 (47-172)||(22791769-22791895)
chr7 (30-155)||(2370744-2370869)
chr7 (32-172)||(34349680-34349820)
chr7 (28-123)||(34182088-34182182)
chr7 (32-169)||(36863263-36863400)
chr7 (1-103)||(48137246-48137348)
chr7 (47-172)||(8632778-8632903)
chr7 (31-172)||(46817041-46817180)
chr7 (29-170)||(49112335-49112476)
chr7 (28-169)||(23108543-23108684)
chr7 (119-172)||(40683489-40683542)
chr7 (30-138)||(18834231-18834339)
chr7 (192-228)||(36698140-36698176)
chr7 (28-80)||(48949603-48949655)
chr7 (195-228)||(28060986-28061019)
chr7 (187-228)||(29286046-29286087)
chr7 (105-158)||(48949549-48949602)
chr7 (195-227)||(44547421-44547453)
chr7 (37-172)||(10013252-10013386)
chr7 (125-172)||(40921631-40921678)
chr7 (198-228)||(20075116-20075146)
chr7 (198-228)||(38858296-38858326)
chr7 (196-225)||(29177264-29177293)
chr7 (199-228)||(32814432-32814461)
chr7 (199-228)||(33858875-33858904)
chr7 (199-228)||(39871622-39871651)
chr7 (200-228)||(19920563-19920591)
chr7 (200-228)||(21295151-21295179)
chr7 (200-228)||(26255096-26255124)
chr7 (196-228)||(27813492-27813524)
chr7 (200-228)||(32872384-32872412)
chr7 (198-226)||(34979088-34979116)
chr7 (86-138)||(36643394-36643446)
chr7 (200-228)||(38428416-38428444)
chr7 (200-228)||(39197718-39197746)
chr7 (200-228)||(40300230-40300258)
chr7 (200-228)||(41026105-41026133)
chr7 (200-228)||(41252370-41252398)
chr7 (200-228)||(48521029-48521057)
[»] chr5 (69 HSPs)
chr5 (1-172)||(7949694-7949865)
chr5 (28-172)||(28759338-28759482)
chr5 (1-172)||(26264358-26264529)
chr5 (29-171)||(20122706-20122848)
chr5 (1-172)||(26507207-26507378)
chr5 (1-172)||(24566198-24566369)
chr5 (1-172)||(24607234-24607405)
chr5 (28-172)||(1840513-1840657)
chr5 (28-172)||(39479343-39479487)
chr5 (29-172)||(27345231-27345374)
chr5 (18-172)||(16748942-16749096)
chr5 (18-170)||(5361142-5361293)
chr5 (28-172)||(16653904-16654048)
chr5 (32-172)||(43320498-43320638)
chr5 (31-172)||(7073962-7074103)
chr5 (28-158)||(2466288-2466418)
chr5 (28-172)||(17320367-17320511)
chr5 (1-172)||(18922131-18922302)
chr5 (16-154)||(2800615-2800752)
chr5 (16-154)||(2806784-2806921)
chr5 (1-172)||(21162640-21162811)
chr5 (18-172)||(17016470-17016624)
chr5 (28-172)||(1463066-1463208)
chr5 (29-158)||(36682732-36682861)
chr5 (28-172)||(14505870-14506014)
chr5 (1-172)||(7344656-7344827)
chr5 (1-172)||(21151697-21151868)
chr5 (1-172)||(21158832-21159003)
chr5 (29-123)||(5494666-5494760)
chr5 (28-158)||(8320477-8320607)
chr5 (29-172)||(4725178-4725320)
chr5 (28-158)||(24316547-24316677)
chr5 (28-169)||(39048670-39048810)
chr5 (18-113)||(38062946-38063040)
chr5 (29-172)||(41203305-41203444)
chr5 (1-158)||(7826924-7827081)
chr5 (99-171)||(39088998-39089070)
chr5 (100-172)||(8321755-8321827)
chr5 (97-172)||(6286172-6286247)
chr5 (83-172)||(19646925-19647014)
chr5 (47-171)||(31878069-31878193)
chr5 (30-112)||(9528662-9528744)
chr5 (18-135)||(39087669-39087786)
chr5 (72-172)||(39754441-39754541)
chr5 (19-138)||(7726369-7726488)
chr5 (28-70)||(39088952-39088994)
chr5 (195-228)||(22527687-22527720)
chr5 (196-228)||(186367-186399)
chr5 (196-228)||(40004418-40004450)
chr5 (197-228)||(34662201-34662232)
chr5 (198-228)||(6673237-6673267)
chr5 (197-227)||(13661129-13661159)
chr5 (198-228)||(14913646-14913676)
chr5 (198-228)||(16440929-16440959)
chr5 (198-228)||(26894882-26894912)
chr5 (135-172)||(5494758-5494795)
chr5 (28-77)||(6286128-6286177)
chr5 (199-228)||(9020693-9020722)
chr5 (197-226)||(15190826-15190855)
chr5 (199-228)||(16127258-16127287)
chr5 (195-228)||(26889588-26889621)
chr5 (198-227)||(32147292-32147321)
chr5 (200-228)||(1265949-1265977)
chr5 (200-228)||(7951562-7951590)
chr5 (200-228)||(9828393-9828421)
chr5 (200-228)||(9828662-9828690)
chr5 (200-228)||(10734532-10734560)
chr5 (194-222)||(16441205-16441233)
chr5 (192-224)||(42273828-42273860)
[»] chr6 (38 HSPs)
chr6 (19-172)||(4170901-4171054)
chr6 (1-172)||(2702963-2703134)
chr6 (28-172)||(2067144-2067288)
chr6 (28-172)||(22988137-22988281)
chr6 (28-172)||(23800115-23800259)
chr6 (1-172)||(17547471-17547642)
chr6 (1-172)||(29641012-29641183)
chr6 (15-172)||(26555184-26555341)
chr6 (1-166)||(31511197-31511362)
chr6 (28-172)||(9035066-9035210)
chr6 (1-172)||(15183712-15183884)
chr6 (28-172)||(15067987-15068131)
chr6 (31-172)||(32897086-32897227)
chr6 (28-172)||(12577291-12577434)
chr6 (47-158)||(29034472-29034583)
chr6 (26-172)||(13835919-13836065)
chr6 (1-128)||(34178412-34178539)
chr6 (28-158)||(21036066-21036196)
chr6 (47-172)||(26483659-26483784)
chr6 (18-172)||(28985265-28985422)
chr6 (115-172)||(13087814-13087871)
chr6 (29-103)||(13087742-13087817)
chr6 (196-228)||(30248643-30248675)
chr6 (85-144)||(2289979-2290038)
chr6 (198-228)||(4844398-4844428)
chr6 (197-227)||(5457409-5457439)
chr6 (198-228)||(34741735-34741765)
chr6 (199-228)||(12144047-12144076)
chr6 (200-228)||(231114-231142)
chr6 (200-228)||(8743188-8743216)
chr6 (200-228)||(9038642-9038670)
chr6 (200-228)||(9388529-9388557)
chr6 (199-227)||(9388801-9388829)
chr6 (200-228)||(11847841-11847869)
chr6 (199-227)||(23397878-23397906)
chr6 (200-228)||(23398148-23398176)
chr6 (192-228)||(31149979-31150015)
chr6 (200-228)||(34301841-34301869)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-172)||(27596-27767)
[»] scaffold0124 (1 HSPs)
scaffold0124 (28-172)||(40024-40168)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-172)||(56204-56374)
scaffold0007 (28-138)||(231673-231783)
[»] scaffold0664 (1 HSPs)
scaffold0664 (34-172)||(7751-7889)
[»] scaffold1318 (1 HSPs)
scaffold1318 (32-172)||(950-1090)
[»] scaffold0360 (1 HSPs)
scaffold0360 (28-172)||(12770-12914)
[»] scaffold0831 (1 HSPs)
scaffold0831 (19-172)||(39-192)
[»] scaffold0171 (1 HSPs)
scaffold0171 (30-171)||(2317-2458)
[»] scaffold0661 (1 HSPs)
scaffold0661 (18-172)||(1534-1688)
[»] scaffold0019 (1 HSPs)
scaffold0019 (29-172)||(103079-103222)
[»] scaffold1243 (1 HSPs)
scaffold1243 (28-138)||(2012-2122)
[»] scaffold0173 (1 HSPs)
scaffold0173 (25-113)||(21970-22058)
[»] scaffold0461 (2 HSPs)
scaffold0461 (28-113)||(2416-2501)
scaffold0461 (28-113)||(9352-9437)
[»] scaffold0951 (1 HSPs)
scaffold0951 (66-172)||(1541-1645)
[»] scaffold0583 (1 HSPs)
scaffold0583 (1-103)||(2210-2312)
[»] scaffold0021 (2 HSPs)
scaffold0021 (28-117)||(125875-125964)
scaffold0021 (119-172)||(120949-121002)
[»] scaffold0079 (2 HSPs)
scaffold0079 (123-172)||(45957-46006)
scaffold0079 (1-87)||(45850-45936)
[»] scaffold0041 (1 HSPs)
scaffold0041 (125-172)||(51417-51464)
[»] scaffold0029 (1 HSPs)
scaffold0029 (197-228)||(51691-51722)
[»] scaffold0122 (1 HSPs)
scaffold0122 (198-228)||(12063-12093)
[»] scaffold0012 (1 HSPs)
scaffold0012 (198-228)||(47638-47668)
[»] scaffold0002 (1 HSPs)
scaffold0002 (198-228)||(355340-355370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (199-228)||(259131-259160)
[»] scaffold0604 (1 HSPs)
scaffold0604 (200-228)||(3791-3819)
[»] scaffold0025 (2 HSPs)
scaffold0025 (200-228)||(65378-65406)
scaffold0025 (199-227)||(65647-65675)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 41933250 - 41933421
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||    
T  41933250 caaaacgggccgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggcttttcagcc 41933349  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41933350 cggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 41933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 26898218 - 26898362
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  26898218 cccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 26898317  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26898318 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 26898362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7910302 - 7910131
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  7910302 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 7910203  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7910202 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 7910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 9301181 - 9301033
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||| |||| ||||||||||||||||| |||||||||    
T  9301181 ccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagccggaattttaatagggctttttagcccggcccttaaaagcccggtaccc 9301082  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9301081 gttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 9301033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 55423716 - 55423860
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  55423716 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 55423815  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  55423816 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 55423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 26823011 - 26823162
Alignment:
Q  21 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 120  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  26823011 ggaccggcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggta 26823110  T
Q  121 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26823111 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26823162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 1694978 - 1695122
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  1694978 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaaacccggtacccttta 1695077  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  1695078 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1695122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 1842538 - 1842682
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||||||| |||    
T  1842538 cccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgtta 1842637  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  1842638 gggctagcccgaatgggtcgcgggtagcccgttagcccgcataac 1842682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 43087971 - 43088113
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||| ||||||||| |||||    
T  43087971 cgtttagcccaaataaatatagggtttgggcctaaaatattgagcccaaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagg 43088070  T
Q  130 gctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  43088071 gctagcccgaacgggccgcaggtagcccgttagtccgcataac 43088113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 10804653 - 10804509
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| || |||||| |||    
T  10804653 cccgtttagcccgaataaatatagagtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgtta 10804554  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||    
T  10804553 gggctagcccgaatgagccacgggtagcccgttagcccgcataac 10804509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 31412250 - 31412107
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||  ||||||||| |||    
T  31412250 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaaacccggtacccatta 31412151  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  31412150 gggctagcccgaa-gggccacgggtagcccgttagcccgcataac 31412107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 50155661 - 50155517
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||| |||| |||||| |||||||||| ||||||||| |||    
T  50155661 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccaaattttaatagggctttttagcccgacccttaaaagcccggtacccgtta 50155562  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50155561 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50155517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33911628 - 33911791
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||  ||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||  |||| ||||    
T  33911628 caaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaataggactttttagcc 33911727  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcc 164  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  33911728 cggcccttaaaagtccggtacccgttagggctagtccgaatgggccgcgggtagcccgttagcc 33911791  T

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Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 39095370 - 39095227
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| | |||| | ||||||||||||||  ||||||||| |||    
T  39095370 cccgtttagcccgaaaaaatatagggtttgggcctaaaatattgagcccgaattttaatagagctttttaacccggcccttaaaaacccggtacccgtta 39095271  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  39095270 gggctagcccgaacggaccgcgggtagcccgttagcccgcataa 39095227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 54313462 - 54313318
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  54313462 cccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgtta 54313363  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  54313362 gggctagcccgaaagggccgcgggtagcccgttagcccgcataac 54313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 14741137 - 14741005
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||  |||||||||| |||||||||    
T  14741137 ccgacccgtttaacccaaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagccctacccttaaaagcccggtaccc 14741038  T
Q  124 tttagggctagcccgaacgggccgcgggtagcc 156  Q
     ||||||||||||||||||||||||||||||||    
T  14741037 gttagggctagcccgaacgggccgcgggtagcc 14741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 41879531 - 41879387
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| |||||||||||||||| ||||||| || ||||| |||||||||| |||| ||||||||||| ||||||| ||||||| |||    
T  41879531 cccgtttagcccgattaattatagggtttggaccttaaatattgagtccgaaatttaatagggctttttagcccggccctaaaaagtctggtacccgtta 41879432  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  41879431 gggctagcccgaaagggccgcgggtagcccgttagcccacataac 41879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 3995001 - 3995172
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||| |||||||||| ||||||||||| || | ||| ||||||| ||||||||||||||||||| |||| ||||    
T  3995001 caaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagggctttttagcc 3995100  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3995101 cggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 33215392 - 33215521
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||  ||||    
T  33215392 ccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagttcggtacctgttag 33215491  T
Q  129 ggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||| |||||||||||||||||    
T  33215492 ggctagcccgaatgggccgcgggtagcccg 33215521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 32774558 - 32774414
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||  |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  32774558 cccgtttagcccgattaattataggacttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgtta 32774459  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  32774458 gggctagcccgaaagggccgcgggtagcccgttagcccacataac 32774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3974876 - 3974705
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||| |||||||||| ||||||||||| || | ||| ||||||| ||||||||||||||||||| |||| ||||    
T  3974876 caaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagggctttttagcc 3974777  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||  ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3974776 cggccctaaaaatcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17525463 - 17525302
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||||| || || || ||||||||| ||||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  17525463 caaaacgtgccggcccgtatggaccggcccgtttagcc-gaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagcc 17525365  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagc 163  Q
    |||| |||||||| |||||| || | |||||||||||||| ||||||||||||||||||||||    
T  17525364 cggctcttaaaagcccggtatccgtcagggctagcccgaatgggccgcgggtagcccgttagc 17525302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 51744103 - 51744252
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt-ttttcagcccggcccttaaaagtccggtacc 122  Q
    |||||||||||| ||||| ||| |||||||||||| ||| |||| || | |||||||||||||||||| |||| ||||||||||| |||||  |||||||    
T  51744103 ccgacccgtttaacccgattaattatagggtttgggccttaaatgttgaacccgaattttaatagggtctttttagcccggccctaaaaagctcggtacc 51744202  T
Q  123 ctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51744203 cattagggctagcccgaacgggctgcgggtagcccgttagcccgcataac 51744252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 51885426 - 51885297
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||    
T  51885426 ccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagtccgctacccgttag 51885327  T
Q  129 ggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||||||||| ||||||||||    
T  51885326 ggctagcccgaacgggccgagggtagcccg 51885297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 7399701 - 7399832
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg-gtacccttt 126  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||  | ||| ||    
T  7399701 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgattccccgtt 7399800  T
Q  127 agggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||| |||||||||||||||||    
T  7399801 agggctagcccgaatgggccgcgggtagcccg 7399832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 42481131 - 42480988
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| |||||| |||||||||||| |||| ||||||||||| ||||| ||| ||||| ||||    
T  42481131 ccgtttagcccgattaattatagggcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagcccgatacccgttag 42481032  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     |||||| ||||||||||||||||||||||||||||||||||||    
T  42481031 agctagctcgaacgggccgcgggtagcccgttagcccgcataac 42480988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29522942 - 29522785
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||| ||| |||||||||||| ||| ||||||| || |||||||||||||||| |||| ||||    
T  29522942 caaaacgggccgggccctatgggccggcccgtttagcccgattaattatagggtttgggccttaaatattgagtccgaattttaatagggctttttagcc 29522843  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  29522842 cggccctaaaaagcccgctacccgttagggctagcccgaacaggccgagggtagcccg 29522785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 49318276 - 49318447
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| |||||||||||||| ||||||||||| |||| ||| ||||||| |||||||||||||||||||||||| | ||    
T  49318276 caaaacgggtcgggccgtatgggccggcccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggttttttaacc 49318375  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||  |||  ||| ||||| ||||||||| ||||||||||||| |||| ||||| |||||||||||||    
T  49318376 cggccctataaaacccgctacccgttagggctaacccgaacgggccgagggttgcccgctagcccgcataac 49318447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10267812 - 10267949
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||| |||| || || ||||| ||| |||||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||| |||| ||||    
T  10267812 caaaatgggctgggccgtatgggccggcccgtttagcccgaataaatatagggctcgggcctaaaatattgagcccgaattttaatagggctttttagcc 10267911  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccg 138  Q
    ||||||||||||| ||| ||||| ||||||||||||||    
T  10267912 cggcccttaaaagcccgttacccgttagggctagcccg 10267949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 24570265 - 24570405
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||| ||||| |||||||||||||||| ||| ||||| | |||||||||||||||| ||||||| || |||| ||| ||||||||| ||||| |||||||    
T  24570265 tttaacccgattaaatatagggtttgggccttaaataatgagcccgaattttaataaggttttttagtccggtcctaaaaagtccgctacccgttagggc 24570364  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||| |||||||||| ||| |||||||||    
T  24570365 tagcccgaacgggccgagggtagcccgctagtccgcataac 24570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 15489084 - 15489190
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||| ||||||| |||||||    
T  15489084 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagtctggtacccgttagggc 15489183  T
Q  132 tagcccg 138  Q
    |||||||    
T  15489184 tagcccg 15489190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 1557471 - 1557332
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||| ||| ||||||||||||  || ||||||||||  |||||||||||||| ||||| || |||||||| |||||| |||||||| |||||||    
T  1557471 tttagcccgattaattatagggtttgggtcttaaatattaagatcgaattttaataggattttttagtccggccctaaaaagttcggtaccccttagggc 1557372  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  1557371 tagctcgaac-ggccgcggatagcccgttagcccgcataac 1557332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 35603966 - 35603810
Alignment:
Q  16 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 115  Q
    ||||||| |||||||||||||||||| ||| ||||||| |||| ||| ||||||| |||| |||||||||||||| |||| |||||| || | ||||| |    
T  35603966 catatggcccgacccgtttagcccgattaattatagggcttgggccttaaatattgagccggaattttaataggggtttttagcccgaccttaaaaagcc 35603867  T
Q  116 cggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||||    |||||||||||||||||||| |||||||||| |||||||||||||    
T  35603866 cgctacccgaacgggctagcccgaacgggccgagggtagcccgctagcccgcataac 35603810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 1460429 - 1460258
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || || ||||| ||| ||||||||| | || ||||||||||| |||| ||| ||||||| ||||||||||||||||| | |||| ||||    
T  1460429 caaaacggaccgggccgtatgggccggcccgtttagtctgattaaatatagggcttgggccttaaatattgagcccgaattttaatagagctttttagcc 1460330  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| || || ||||||||||||||||||||||| |||||||||| || |||| |||||    
T  1460329 cggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctatcccgaataac 1460258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 12768573 - 12768730
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || ||| |||||||| ||||| ||| ||||||| |||| | | ||||||| ||||||||||||||||||| |||| ||||    
T  12768573 caaaacgggccgggccttacgggccggcccgtttaacccgattaattatagggcttgggctttaaatattgagcccgaattttaatagggctttttagcc 12768672  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
     |||||| ||||| |||||| || |||||||||||||||||||| |||||||||||||    
T  12768673 tggccctaaaaagcccggtatccgttagggctagcccgaacgggtcgcgggtagcccg 12768730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 36638097 - 36638241
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| |||||||||||  ||| ||| ||||||| ||||||||||||||||||| |||| |||| |||||| ||||  | | | ||| |||    
T  36638097 cccgtttagcccgattaaatatagggcctgggccttaaatattgagcccgaattttaatagggctttttagcctggccctaaaaaacctgctgcccgtta 36638196  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||    
T  36638197 gggctagcccgaacgggccgagggtagcccgctagcctgcataac 36638241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 44845370 - 44845231
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||| ||| ||||||||||||   | ||||||| ||||||||||||||||||  |||| ||||||||  | | ||| ||||||||| |||||||    
T  44845370 tttagcccgattaattatagggtttgggttttaaatattgagcccgaattttaataggactttttagcccggctttaagaagcccggtacccgttagggc 44845271  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||||||| || |||||||||||||| |||||||    
T  44845270 tagcccgaacgggctgcaggtagcccgttagctcgcataa 44845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 44310251 - 44310395
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||| ||| ||| ||||||| |||  ||| ||||||| ||||||||||||||||||| |||| |||||  |||| ||||| | | || || |||    
T  44310251 cccgtttagctcgattaattatagggcttgtgccttaaatattgagcccgaattttaatagggctttttagcccaaccctaaaaagcctgctatccgtta 44310350  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||||||||||| |||||| ||| |||||||||||||    
T  44310351 gggctaacccgaacgggccgagggtagtccgctagcccgcataac 44310395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 28816170 - 28816103
Alignment:
Q  104 cccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  28816170 cccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 28816103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 53468080 - 53468209
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| ||| ||||||| |||| ||| ||||||||||| ||||||||||||||| |||| |||||| |||| |||||  ||| |||| |||    
T  53468080 cccgtttaacccgattaattatagggcttgggccttaaatattaagcacgaattttaatagggctttttagcccgaccctaaaaagcacggaacccgtta 53468179  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
     |||||||||||||||| || ||||||||||    
T  53468180 tggctagcccgaacggg-cgggggtagcccg 53468209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39620447 - 39620602
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| |||||||||||| | ||| ||||||| |||| ||| ||||||| ||||| ||||||||| ||| |||| ||||    
T  39620447 caaaacgggacgggccgtatgggccggcccgtttagcccaattaattatagggcttgggccttaaatattgagcccaaattttaatggggctttttagcc 39620546  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcc 156  Q
    ||||||| |||||  ||||| || ||| |||||||||||||  ||| |||||||||    
T  39620547 cggccctaaaaagctcggtatccgttaaggctagcccgaacaagccacgggtagcc 39620602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 28970565 - 28970683
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||  ||||||| |||| ||| ||||||| |||||||||||||||| || |||| | ||||| ||| ||||| ||||||||| |||    
T  28970565 cccgtttagcccgattatttatagggcttgggccttaaatattgagcccgaattttaataaggctttttaccccggtcctgaaaagcccggtacccgtta 28970664  T
Q  128 gggctagcccgaacgggcc 146  Q
    ||||||| | |||||||||    
T  28970665 gggctagtctgaacgggcc 28970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 41209501 - 41209396
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| ||| |||||| ||||| | | ||||||| ||||||||||||||||||| |||| |||||| |||| ||||||||||||||| |||    
T  41209501 cccgtttaacccgattaattatagg-tttgggctttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagtccggtacccgtta 41209403  T
Q  128 gggctag 134  Q
    |||||||    
T  41209402 gggctag 41209396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 49506124 - 49506211
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcc 105  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||| ||||||| |||| |||||||||||||| |||| || ||||||    
T  49506124 tatggaccggcccgtttagcccgattaattatagggtttgggccttaaatattgagcctgaattttaatagggctttttagtccggcc 49506211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 15646536 - 15646479
Alignment:
Q  115 ccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||    
T  15646536 ccggtacccgttagggctagcccgcatgggccgcgggtatcccgttagcccgcataac 15646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 27182441 - 27182399
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatatt 70  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  27182441 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 27182399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 30105867 - 30105825
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatatt 70  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  30105867 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 30105825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 32963149 - 32963117
Alignment:
Q  193 atatatatactccctccgtccctaattataaga 225  Q
    |||||||||||||||||||||||||||||||||    
T  32963149 atatatatactccctccgtccctaattataaga 32963117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 43868100 - 43868131
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  43868100 atatactccctccgtccctaattataagaccc 43868131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 14428912 - 14428878
Alignment:
Q  194 tatatatactccctccgtccctaattataagaccc 228  Q
    |||| ||||||||||||||||||||||||||||||    
T  14428912 tataaatactccctccgtccctaattataagaccc 14428878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 23700825 - 23700795
Alignment:
Q  197 atatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||    
T  23700825 atatactccctccgtccctaattataagacc 23700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 23719280 - 23719250
Alignment:
Q  197 atatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||    
T  23719280 atatactccctccgtccctaattataagacc 23719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 23737736 - 23737706
Alignment:
Q  197 atatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||    
T  23737736 atatactccctccgtccctaattataagacc 23737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 7181349 - 7181378
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  7181349 atactccctccgtccctaattataagaccc 7181378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 12050430 - 12050401
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  12050430 atactccctccgtccctaattataagaccc 12050401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 20862495 - 20862466
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  20862495 atactccctccgtccctaattataagaccc 20862466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 22103967 - 22103938
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  22103967 atactccctccgtccctaattataagaccc 22103938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 22832649 - 22832616
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    ||||||||||| ||||||||||||||||||||||    
T  22832649 atatatactccttccgtccctaattataagaccc 22832616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 25149160 - 25149131
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  25149160 atactccctccgtccctaattataagaccc 25149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 26221285 - 26221314
Alignment:
Q  197 atatactccctccgtccctaattataagac 226  Q
    ||||||||||||||||||||||||||||||    
T  26221285 atatactccctccgtccctaattataagac 26221314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 26806114 - 26806143
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  26806114 atactccctccgtccctaattataagaccc 26806143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 33868746 - 33868717
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  33868746 atactccctccgtccctaattataagaccc 33868717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 35868121 - 35868092
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagaccc 35868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 37728712 - 37728741
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  37728712 atactccctccgtccctaattataagaccc 37728741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 44543781 - 44543810
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  44543781 atactccctccgtccctaattataagaccc 44543810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 50647683 - 50647712
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  50647683 atactccctccgtccctaattataagaccc 50647712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 51284100 - 51284071
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  51284100 atactccctccgtccctaattataagaccc 51284071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Complemental strand, 53271891 - 53271862
Alignment:
Q  197 atatactccctccgtccctaattataagac 226  Q
    ||||||||||||||||||||||||||||||    
T  53271891 atatactccctccgtccctaattataagac 53271862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 4024052 - 4024080
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagaccc 4024080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 4024348 - 4024320
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  4024348 tactccctccgtccctaattataagaccc 4024320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 7251319 - 7251291
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  7251319 tactccctccgtccctaattataagaccc 7251291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 9499534 - 9499506
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagaccc 9499506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 9779979 - 9780007
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9779979 tactccctccgtccctaattataagaccc 9780007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 10044839 - 10044867
Alignment:
Q  197 atatactccctccgtccctaattataaga 225  Q
    |||||||||||||||||||||||||||||    
T  10044839 atatactccctccgtccctaattataaga 10044867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 10220933 - 10220961
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  10220933 tactccctccgtccctaattataagaccc 10220961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 14428610 - 14428638
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagaccc 14428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 16434977 - 16435005
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  16434977 tactccctccgtccctaattataagaccc 16435005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 21756486 - 21756514
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  21756486 tactccctccgtccctaattataagaccc 21756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 26593802 - 26593774
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  26593802 tactccctccgtccctaattataagaccc 26593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 31531448 - 31531420
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  31531448 tactccctccgtccctaattataagaccc 31531420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 33868445 - 33868473
Alignment:
Q  197 atatactccctccgtccctaattataaga 225  Q
    |||||||||||||||||||||||||||||    
T  33868445 atatactccctccgtccctaattataaga 33868473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 36005801 - 36005773
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  36005801 tactccctccgtccctaattataagaccc 36005773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 45252773 - 45252801
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagaccc 45252801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 46050023 - 46049995
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  46050023 tactccctccgtccctaattataagaccc 46049995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 52058985 - 52059013
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  52058985 tactccctccgtccctaattataagaccc 52059013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 53361893 - 53361865
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  53361893 atactccctccgtccctaattataagacc 53361865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5114878 - 5115049
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  5114878 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattaagcccgaattttaatagggctttttagcc 5114977  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5114978 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 30723300 - 30723444
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  30723300 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 30723399  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30723400 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 30723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 40601881 - 40601710
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||| ||||    
T  40601881 caaaacgggccggcccgtatgggccggcccgtttaacccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagagctttttagcc 40601782  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40601781 cggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 44373031 - 44372860
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || |||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||| |||| ||||    
T  44373031 caaaacggaccggcccatatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagggctttttagcc 44372932  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  44372931 cggcccttaaaagtccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 44372860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 48812687 - 48812516
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  48812687 caaaacgggccggcccgtatgggccgtcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 48812588  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48812587 cgacccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48812516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19406619 - 19406790
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||| |||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  19406619 caaaatgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 19406718  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19406719 cggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccgttagcccgcataac 19406790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 41310649 - 41310505
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| |||| |||    
T  41310649 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgtta 41310550  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  41310549 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41310505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 39995579 - 39995436
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  39995579 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 39995480  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  39995479 ggctagcccgaatgggccgcgagtagcccgttagcccgcataac 39995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 1858895 - 1858752
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  1858895 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 1858796  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||    
T  1858795 ggctggcccgaatgggacgcgggtagcccgttagcccgcataac 1858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28199190 - 28199347
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || |  ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||| ||||    
T  28199190 caaaacgggccggcctgtatgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaatttgaatagggctttttagcc 28199289  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  28199290 cggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccg 28199347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 48913581 - 48913724
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||  |||||||||||||||| ||||  |||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  48913581 ccgtttaatccgaataaatatagggcttgggtctaaaatattgagcctgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttag 48913680  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  48913681 ggctagcccgaatgggccgcgggtagcccgttggcccgcataac 48913724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 35985613 - 35985469
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| || |||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  35985613 cccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggctttttagcccggccctaaaaagcccggtacccatta 35985514  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  35985513 gggctaacccgaacgggccgcgggtagcccgttagcccgcataac 35985469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 47034643 - 47034514
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||  ||||    
T  47034643 ccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagttcggtacctgttag 47034544  T
Q  129 ggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||| |||||||||||||||||    
T  47034543 ggctagcccgaatgggccgcgggtagcccg 47034514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 699880 - 700051
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || || ||||| |||||||||||||||||| ||| ||||||| |||| ||| ||||||| ||||| ||||||||||||| |||| ||||    
T  699880 caaaacggaccgggccgtatgggccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccaaattttaatagggctttttagcc 699979  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  699980 cgaccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 700051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 44922164 - 44922335
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||  |||||||||||| | ||| |||| || |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  44922164 caaaacgggccgggccgtatgggccagcccgtttagcccaattaattataaggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 44922263  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  44922264 cggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44922335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50512128 - 50511957
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||| |||| || || ||||| ||| ||| |||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  50512128 caaaatgggccgggccgtatgggccggcccatttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggctttttagcc 50512029  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||  |||||||||| |||||||||||||    
T  50512028 cggccctaaaaagcccgctacccgttagggctagcccgaacgggccaagggtagcccgctagcccgcataac 50511957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 42102163 - 42102308
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||  |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  42102163 caaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcc 42102262  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccg 147  Q
    |||||||||||||  |||||||| |||||||||| ||||||||||||    
T  42102263 cggcccttaaaagctcggtacccgttagggctag-ccgaacgggccg 42102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 33815045 - 33814903
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| | ||||||||||||| ||| |||| |||||| |||| ||||||||| ||||| ||||    
T  33815045 ccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaattttaatggggctttttagcccgaccctaaaaagtccgctacccgttag 33814947  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  33814946 ggctagcccgaacgggccgagggtagcccgttagcccgcataac 33814903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 33874515 - 33874373
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| | ||||||||||||| ||| |||| |||||| |||| ||||||||| ||||| ||||    
T  33874515 ccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaattttaatggggctttttagcccgaccctaaaaagtccgctacccgttag 33874417  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  33874416 ggctagcccgaacgggccgagggtagcccgttagcccgcataac 33874373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 38235638 - 38235764
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||    ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  38235638 ccgtttagcccgaataaatatagggcttgagtttaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagtccggtacccgttag 38235737  T
Q  129 ggctagcccgaacgggccgcgggtagc 155  Q
    |||||| ||||| || |||||||||||    
T  38235738 ggctagtccgaatggaccgcgggtagc 38235764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 40412666 - 40412495
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||| | ||| |||||||||||||| ||| |||| || |||| ||| ||||||| ||||||||||||||||||| |||| | ||    
T  40412666 caaaacgggccgggccgtattggccggcccgtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggctttttaacc 40412567  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||| | ||||| |||||||    
T  40412566 cggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcctgctagcctgcataac 40412495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 45826663 - 45826797
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||||| ||| |||| |  ||||  || ||||||| ||||||||||||||||||| |||| ||||||| ||| |||||||||||||||    
T  45826663 ccgacccgtttagcccgattaattatatgacttgggtcttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagtccggtaccc 45826762  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccg 158  Q
     ||||| ||||||||||||||||||||||||||||    
T  45826763 gttaggactagcccgaacgggccgcgggtagcccg 45826797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 25423407 - 25423271
Alignment:
Q  36 gcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagc 135  Q
    |||||| ||| ||||| |||||| ||| ||||||||||||||||||||||||||| |||| |||| |||| | ||||| ||||||||| |||||||||||    
T  25423407 gcccgattaattatagagtttgggccttaaatattaagcccgaattttaatagggctttttagcctggccttaaaaagcccggtacccgttagggctagc 25423308  T
Q  136 ccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||   ||||||||||||||| |||||||    
T  25423307 ccgaacgggccatcggtagcccgttagcctgcataac 25423271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 48605962 - 48605821
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||  |||| ||| |||||||||||| ||| ||||||| ||||||||||||||||||  |||| ||||||||| | ||||||||||||  | ||||    
T  48605962 ccgtttattccgattaattatagggtttgggccttaaatattgagcccgaattttaataggactttttagcccggccttaaaaagtccggta-tcgttag 48605864  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  48605863 ggctagtccgaacgggccgcggatagcccgttagcccgcataa 48605821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 48940807 - 48940937
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| |||||| |||| ||||| ||  ||||| |||    
T  48940807 cccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccactacccgtta 48940906  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||||||||| ||||||||||    
T  48940907 gggctagcccgaacgggccgagggtagcccg 48940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 20722202 - 20722319
Alignment:
Q  41 aataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaa 140  Q
    ||||| |||||||||| | ||| ||||||| ||||||||||||||||||| |||| ||||||||| | ||||| | ||||||| ||||||||||||||||    
T  20722202 aataattatagggtttaggccttaaatattgagcccgaattttaatagggctttttagcccggccttaaaaagcctggtacccgttagggctagcccgaa 20722301  T
Q  141 cgggccgcgggtagcccg 158  Q
    ||||||||||||||||||    
T  20722302 cgggccgcgggtagcccg 20722319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 170
Target Start/End: Complemental strand, 21088633 - 21088508
Alignment:
Q  45 aatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacggg 144  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||  |||| ||||||||| ||||||| ||||||||| |||||||||||||||| ||     
T  21088633 aatatagggtttgggcttaaaatattgagcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccgttagggctagcccgaatgga 21088534  T
Q  145 ccgcgggtagcccgttagcccgcata 170  Q
    ||||||||| ||||||||||| ||||    
T  21088533 ccgcgggtaacccgttagcccacata 21088508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 23974302 - 23974159
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||| |||||||||||||||||||   |||||||||| ||||||||| ||||||||| |||| |||||||||| ||||||  ||||||||  ||    
T  23974302 cccgtttagctcgaataaatatagggtttgtgtctaaaatattgagcccgaatgttaatagggctttttagcccggcccataaaagctcggtaccc-gta 23974204  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||| ||||||  |||||||||||||||||| |||||||    
T  23974203 gggctaacccaaacgggttgcgggtagcccgttagccagcataac 23974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 45794203 - 45794063
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||| ||| ||| ||||||| |||  ||| ||||||| ||| |||||||||||||||||||| || |||||||| ||||     |||||| |||    
T  45794203 cccgtttagctcgattaattatagggcttgagccttaaatattgagctcgaattttaatagggttttttagtccggccctaaaaat----gtacccgtta 45794108  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  45794107 gggctagcccgaacgggccgcgggtagcccgttagccagcataac 45794063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 52929562 - 52929451
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||| |||| ||||    
T  52929562 caaaacgggccggaccgtatgaatcgacccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccaaattttaatagggatttttagcc 52929463  T
Q  101 cggcccttaaaa 112  Q
    |||||| |||||    
T  52929462 cggcccgtaaaa 52929451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 39003048 - 39003133
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagt 114  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||    
T  39003048 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagt 39003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 343242 - 343113
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||| | |||||               ||||| |||    
T  343242 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaatagggctttttaacccgg---------------tacccgtta 343158  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  343157 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 21719945 - 21720051
Alignment:
Q  66 atattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagccc 165  Q
    ||||| |||| |||||||||||||| |||| ||||||| ||| ||||| ||| ||||| |||||||||||| |||| ||||| |||||||||| |||||     
T  21719945 atattgagccggaattttaatagggatttttagcccggtcctaaaaagcccgctacccgttagggctagcctgaacaggccgagggtagcccgctagcct 21720044  T
Q  166 gcataac 172  Q
    |||||||    
T  21720045 gcataac 21720051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 46868747 - 46868821
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccg 102  Q
    |||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||| || |||| ||||||    
T  46868747 cccgtttaacccaaataaatatagggtttgggcctaaaatattgagcccgaattttaataaggctttttagcccg 46868821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 25155740 - 25155837
Alignment:
Q  60 cctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagccc 157  Q
    ||||||||||| |||| |||||||||||||| |||  |||||| || ||||||| ||| ||| | ||||||||| ||| |||||||||||||||||||    
T  25155740 cctaaaatattgagcctgaattttaatagggctttgtagcccgacctttaaaagcccgatactcgttagggctaacccaaacgggccgcgggtagccc 25155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 27414061 - 27414139
Alignment:
Q  60 cctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 138  Q
    ||||||||||| ||||  |||||||||||||||||  ||||||||||||||||  |||||| || ||||||||||||||    
T  27414061 cctaaaatattgagcctaaattttaatagggttttgtagcccggcccttaaaaacccggtatccattagggctagcccg 27414139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 6715247 - 6715105
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| |||||| ||||||||| ||||||| |||| ||||||||||||   |||| || ||||| || ||||| | | ||| | ||||    
T  6715247 ccgtttagcccgattaattatagg-tttggaccttaaatattgagcctgaattttaatagatgtttttagtccggctctaaaaagccagctactcgttag 6715149  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||  ||||| |||||  ||||||||| |||||||| ||||    
T  6715148 ggctagttcgaacaggccgaaggtagcccgctagcccgcgtaac 6715105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 50863952 - 50863858
Alignment:
Q  64 aaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||| ||||| ||||||||||| | |||| ||  ||||||| |||| |||| ||||| |||||||||| |||||||||||| | ||||||||    
T  50863952 aaatattgagcccaaattttaatagagatttttagttcggccctaaaaaatccgctacccgttagggctagtccgaacgggccgagagtagcccg 50863858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 12255248 - 12255175
Alignment:
Q  99 cccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||| || ||| |||||| | ||||| ||||||||    
T  12255248 cccggccctaaaaagcccggtacccattagggctagcccgaacaggtcgcaggtagctcattagcgcgcataac 12255175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 46868829 - 46868876
Alignment:
Q  125 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||    
T  46868829 ttagggctagcccgaatgagctgcgggtagcccgttagcccgcataac 46868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 1047988 - 1048020
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||    
T  1047988 tatatactccctccgtccctaattataagaccc 1048020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 4102754 - 4102723
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  4102754 atatactccctccgtccctaattataagaccc 4102723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 8104332 - 8104297
Alignment:
Q  193 atatatatactccctccgtccctaattataagaccc 228  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8104332 atataaatactccctccgtccctaattataagaccc 8104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 16576140 - 16576103
Alignment:
Q  188 aaattatatatatactccctccgtccctaattataagac 226  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16576140 aaattatata-atactccctccgtccctaattataagac 16576103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 39362932 - 39362962
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  39362932 tatactccctccgtccctaattataagaccc 39362962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 39750119 - 39750149
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  39750119 tatactccctccgtccctaattataagaccc 39750149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 52431213 - 52431183
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  52431213 tatactccctccgtccctaattataagaccc 52431183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 52601989 - 52602019
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  52601989 tatactccctccgtccctaattataagaccc 52602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 9202244 - 9202273
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  9202244 atactccctccgtccctaattataagaccc 9202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 11741396 - 11741425
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  11741396 atactccctccgtccctaattataagaccc 11741425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 24190683 - 24190650
Alignment:
Q  192 tatatatatactccctccgtccctaattataaga 225  Q
    ||||||||||||||||||||||| ||||||||||    
T  24190683 tatatatatactccctccgtcccaaattataaga 24190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 37951987 - 37951958
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  37951987 atactccctccgtccctaattataagaccc 37951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 38920238 - 38920267
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  38920238 atactccctccgtccctaattataagaccc 38920267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 39497432 - 39497461
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  39497432 atactccctccgtccctaattataagaccc 39497461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 45039411 - 45039440
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagaccc 45039440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 172
Target Start/End: Complemental strand, 52929442 - 52929413
Alignment:
Q  143 ggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||||||||||||||    
T  52929442 ggccgcgggtagcccgttagcccgcataac 52929413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 943674 - 943646
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  943674 tactccctccgtccctaattataagaccc 943646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 1039418 - 1039390
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagaccc 1039390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 1046324 - 1046296
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagaccc 1046296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 15811269 - 15811241
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagaccc 15811241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 16456636 - 16456664
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  16456636 tactccctccgtccctaattataagaccc 16456664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 23541979 - 23542007
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagaccc 23542007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 23542276 - 23542248
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  23542276 tactccctccgtccctaattataagaccc 23542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 30290265 - 30290293
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  30290265 tactccctccgtccctaattataagaccc 30290293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 36694854 - 36694882
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagaccc 36694882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 36710955 - 36710983
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagaccc 36710983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 39363231 - 39363203
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  39363231 tactccctccgtccctaattataagaccc 39363203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 39497730 - 39497702
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  39497730 tactccctccgtccctaattataagaccc 39497702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 44646568 - 44646540
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  44646568 tactccctccgtccctaattataagaccc 44646540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 44649629 - 44649657
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  44649629 tactccctccgtccctaattataagaccc 44649657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 44649926 - 44649898
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  44649926 tactccctccgtccctaattataagaccc 44649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 46075904 - 46075876
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagaccc 46075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 49907021 - 49907049
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagaccc 49907049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 50008523 - 50008495
Alignment:
Q  197 atatactccctccgtccctaattataaga 225  Q
    |||||||||||||||||||||||||||||    
T  50008523 atatactccctccgtccctaattataaga 50008495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6266245 - 6266416
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  6266245 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 6266344  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6266345 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 6266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5927052 - 5927223
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || |||||  || |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  5927052 caaaacgggccggcccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 5927151  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5927152 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5927223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 11202298 - 11202155
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  11202298 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 11202199  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  11202198 ggctagcccgaatgggccgcgggtagcccgttagcccgcataac 11202155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24101892 - 24101721
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||||||| |||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  24101892 caaaacgggccggcccgtatgggccggcccgtttcgcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 24101793  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24101792 cggcccttaaaagcccggtacccgttagggctagcccgaaagggccgcgagtagcccgttagcccgcataac 24101721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 26098274 - 26098418
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  26098274 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 26098373  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  26098374 gggctagcccgaatgggccgcgggtagcccattagcccgcataac 26098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 41827671 - 41827527
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  41827671 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 41827572  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     |||||||||||| |||||||||||||||||||||||||||||||    
T  41827571 aggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 40027736 - 40027889
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  40027736 atgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 40027835  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||||||||| |||| || ||||||||||||||||||||||||||||    
T  40027836 tacccgttagggctagctcgaatggaccgcgggtagcccgttagcccgcataac 40027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 37819212 - 37819356
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  37819212 cccgtttagcccgaataaatatagggcttcggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 37819311  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  37819312 gggctagcccgaatgggccgggggtagcccgttagcccgcataac 37819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 28994756 - 28994905
Alignment:
Q  21 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 120  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||  ||||||    
T  28994756 ggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttt-agcccggcccttaaaa-cccggta 28994853  T
Q  121 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28994854 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28994905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 14615691 - 14615550
Alignment:
Q  31 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||    
T  14615691 gtttagcccgaataaatatagggtttgggcctaaaatattgagcctgaattttaataggattttttagcccggcctttaaaagcccggtacccgttaggg 14615592  T
Q  131 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  14615591 ctagcccgaatgggccgcgggtagcccgttagctcgcataac 14615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 41395785 - 41395942
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| ||||| ||||| ||| | ||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  41395785 caaaacgggccggaccgtatgggccggcacgtgtagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 41395884  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41395885 cgacccttaaaagtccggtacccgttagggctagcccgaatgggccgcgggtagcccg 41395942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 7161575 - 7161715
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||| |||||||    
T  7161575 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccgttagggc 7161674  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  7161675 tagcccgaatgggccgcgggtagtccgttagcccgcataac 7161715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 24476500 - 24476356
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||||||||| |||    
T  24476500 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaattgggctttttagcccggcccttaaatgcccggtacccgtta 24476401  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  24476400 gggctagcccgaatgggccgcaggtagcccgttagcccgcataac 24476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 38231844 - 38231701
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  38231844 ccgtttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 38231745  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||| | ||||||||||||||||||||||||    
T  38231744 ggctagcccgaatgggctgtgggtagcccgttagcccgcataac 38231701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 42935894 - 42935752
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  42935894 cccgtttaacccgaataaatatagggcttgggcctaaaatattgagcctgaattttaataggtttttt-agcccggcccttaaaagtccggtacccgtta 42935796  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  42935795 gggctagcccgaatgggccgtgggtagcccgttagcccgcataa 42935752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 15041326 - 15041480
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||| |||    
T  15041326 tatgggccggcccgtttaacccgaataaatatagggcttgggcctaagatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccg 15041425  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  15041426 atacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 15041480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 31895078 - 31894922
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || ||||| |||||| |||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||| |||| ||||    
T  31895078 caaaacgggccggcccatacggaccggcccgtttagcccgaataaatatagggcttgggcctaaa-tattgagcccgaattttaatagggctttttagcc 31894980  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||    
T  31894979 cggcccttaaaagcccggtacccgttagggctaacccgaatgggccgcgggtagcccg 31894922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 41644294 - 41644150
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||  |||| ||||||||||||||||| ||||||||| |||    
T  41644294 cccgtttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggcctttttagcccggcccttaaaagcccggtacccgtta 41644195  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  41644194 gggctaacccgaatgggctgcgggtagcccgttagcccgcataac 41644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 27640132 - 27639993
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||| |||| ||||||||||||||||| |||||| || |||||||    
T  27640132 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaaatttaatagggctttttagcccggcccttaaaagcccggtatccgttagggc 27640033  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  27640032 tagcccgaataggccgcgggtagcccgttagcccgcataa 27639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 21412435 - 21412589
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| | ||||| |||    
T  21412435 tatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagcccg 21412534  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21412535 gtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21412589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 21806927 - 21807081
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| | ||||| |||    
T  21806927 tatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagcccg 21807026  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21807027 gtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21807081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 7433414 - 7433554
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| |||| |||||||    
T  7433414 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 7433513  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| |||| |||| ||||||||| ||||||||||||||||    
T  7433514 tagctcgaatgggctgcgggtagctcgttagcccgcataac 7433554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20823647 - 20823477
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| |||||||||||||| ||| ||||||| |||  ||| ||||||| ||||||||||||| ||||| |||| ||||    
T  20823647 caaaacgggtcgggccgtatgggccggcccgtttagcccgattaattatagggcttgtgccttaaatattgagcccgaattttagtagggctttttagcc 20823548  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    || |||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20823547 cgaccctaaaaagcccggtacccgttagggttagcccgaacgggccgcgggtagcccgttagcccgcataa 20823477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 37255698 - 37255569
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||| | |||| |||| ||| |||||||| ||||||||| ||||    
T  37255698 ccgtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagagctttttagcctggctcttaaaagcccggtacccgttag 37255599  T
Q  129 ggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||| |||||||||||||||||    
T  37255598 ggctagcccgaatgggccgcgggtagcccg 37255569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 44679273 - 44679145
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||| |||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| |||    
T  44679273 cccgtatagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgtta 44679174  T
Q  128 gggctagcccgaacgggccgcgggtagcc 156  Q
    ||||||||| ||| |||||||||||||||    
T  44679173 gggctagcctgaatgggccgcgggtagcc 44679145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 29940210 - 29940068
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||| | |||| ||| ||||||| ||||||||||||||||||| |||| ||||| ||||| ||||| ||| ||||| ||||    
T  29940210 ccgtttagcccgattaattatagagattgggccttaaatattgagcccgaattttaatagggctttttagcccagccctaaaaagcccgctacccgttag 29940111  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  29940110 ggctagcccgagcgggccgagggtagcccgctagcccgcataa 29940068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 7764325 - 7764481
Alignment:
Q  15 ccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagt 114  Q
    |||||||| |||| ||||||||||||| ||| |||||||||||  ||| ||||||| ||||| ||||||||||||| |||| |||| |||||| ||||||    
T  7764325 ccatatgggccgaaccgtttagcccgattaattatagggtttgagccttaaatattgagcccaaattttaatagggctttttagcctggccctaaaaagt 7764424  T
Q  115 ccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
     | ||| || |||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  7764425 tcagtatccgttagggctagtctgaacgggacgcgggtagcccgttagcctgcataa 7764481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 40027670 - 40027534
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| ||| ||||||| |||||||| ||||||| | || |||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  40027670 cccgtttaacccgattaattatagggcttggaccttaaatattgaacctgaattttaatagggctttttagcccggccctaaaaagcccggtacccgtta 40027571  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcc 164  Q
    ||||||| |||||||||||| || ||||||| |||||    
T  40027570 gggctagtccgaacgggccgaggttagcccgctagcc 40027534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 356418 - 356589
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| |||||||| ||||| ||||||||||| |||| ||| ||||||| | |||||||||||||||||  ||| | ||    
T  356418 caaaacgggtcgggccgtatgggccggcccgtttaacccgattaaatatagggcttgggccttaaatattgaacccgaattttaatagggcattttaacc 356517  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |  | || ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  356518 ctactctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 356589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 32018318 - 32018472
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||  ||| ||||||| | ||| ||||||||||||| |||| ||||||| ||| |||||  ||    
T  32018318 tatgggccggcccgtttagcccgattaattatagggcttgagccttaaatattgatcccaaattttaatagggctttttagcccggtcctaaaaagctcg 32018417  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||| ||||||||||||||||||||||  |||||||||| |||||||||||||    
T  32018418 ctacccattagggctagcccgaacgggccaagggtagcccgctagcccgcataac 32018472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38894689 - 38894819
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| | |||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  38894689 caaaacgggccgggccgtatgggccggctcgtttagcccgattaaatatagggcttggaccttaaatattgagcccgaattttaatagggctttttagcc 38894788  T
Q  101 cggcccttaaaagtccggtaccctttagggc 131  Q
    || |||| ||||| ||| ||||| |||||||    
T  38894789 cgaccctaaaaagcccgctacccgttagggc 38894819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 43067084 - 43067187
Alignment:
Q  51 gggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgg 150  Q
    ||||||||  || ||||||| ||||||||||||||||||| |||| |||||| |||| |||| |||||||||| |||| |||||||||||||||||||||    
T  43067084 gggtttgggtcttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaaatccggtacccgttagagctagcccgaacgggccgcgg 43067183  T
Q  151 gtag 154  Q
    ||||    
T  43067184 gtag 43067187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 5924661 - 5924532
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||                |||||||||||| |||    
T  5924661 cccgtttagcccgaataaatatagggtttgggcctaaaatattgaacccgaattttaatagggatttt---------------tagtccggtacccatta 5924577  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||    
T  5924576 gggctagcccgaatgggccgcgggtagtccattagcccgcataac 5924532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5913268 - 5913405
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||| ||| || || ||||| |||||||||||||||||| ||| ||||||| |||| |||  |||||| |||| |||||||||||||| |||| |||     
T  5913268 caaaacaggccggtccgtatgggccgacccgtttagcccgattaattatagggcttgggccttcaatattgagcctgaattttaatagggctttttagct 5913367  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccg 138  Q
    ||||||| ||||| ||| ||||| ||||||||||||||    
T  5913368 cggccctaaaaagcccgatacccgttagggctagcccg 5913405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 22487439 - 22487330
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||| || ||| ||||||| |||||||| ||||||| |||||||||||||||||||||||| || | |||||| ||||| ||| ||||| ||||    
T  22487439 ccgtttagccagattaattatagggcttggaccttaaatattgagcccgaattttaatagggttttttagtctggccctaaaaagcccgatacccgttag 22487340  T
Q  129 ggctagcccg 138  Q
    || |||||||    
T  22487339 ggttagcccg 22487330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 957506 - 957592
Alignment:
Q  72 agcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  957506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggccagcccgaacgggctgagggtagcccg 957592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 18654488 - 18654541
Alignment:
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18654488 tacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 18654541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 34347114 - 34347019
Alignment:
Q  35 agcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    ||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| |||||| |||| ||||| ||||||||| ||||||    
T  34347114 agcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 34347019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23192848 - 23193019
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||| ||||| | || ||||||||| | |||| ||||||| ||| |||||| ||||   || ||||||| || ||||||||| ||| || |||| | ||    
T  23192848 caaaaggggcaagcccgtatggaccggcacgttaagcccgattaattataggttttgagacttaaatattgagaccgaatttttataaggatttttaacc 23192947  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||| ||||| ||||| ||  || ||||||||||| | ||||||||||||||| || ||||||||||||    
T  23192948 cgaccctaaaaagcccggtgccagtttgggctagcccgtatgggccgcgggtagcctgtgagcccgcataac 23193019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 30874246 - 30874177
Alignment:
Q  103 gcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||| ||| ||||| |||| |||||||||||||||||| |||||||||| |||||||||||||    
T  30874246 gccctaaaaagcccgctacccgttagagctagcccgaacgggccgagggtagcccgctagcccgcataac 30874177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32925492 - 32925404
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 89  Q
    |||||||||  || || ||||||||| |||||||||| ||| ||| |||||||||||| ||| ||||||| ||| ||||||||||||||    
T  32925492 caaaacgggtcgggccttatggaccggcccgtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaatagg 32925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 20983887 - 20983839
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagccc 76  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  20983887 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagccc 20983839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 29279497 - 29279465
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||    
T  29279497 tatatactccctccgtccctaattataagaccc 29279465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 32675802 - 32675766
Alignment:
Q  192 tatatatatactccctccgtccctaattataagaccc 228  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32675802 tatatacatactccctccgtccctaattataagaccc 32675766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 17856816 - 17856785
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  17856816 atatactccctccgtccctaattataagaccc 17856785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 18754142 - 18754172
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  18754142 tatactccctccgtccctaattataagaccc 18754172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 26016567 - 26016597
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  26016567 tatactccctccgtccctaattataagaccc 26016597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 40530445 - 40530415
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  40530445 tatactccctccgtccctaattataagaccc 40530415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 5593416 - 5593449
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    ||||||||||| ||||||||||||||||||||||    
T  5593416 atatatactccttccgtccctaattataagaccc 5593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 8251971 - 8251942
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  8251971 atactccctccgtccctaattataagaccc 8251942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 13153927 - 13153956
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  13153927 atactccctccgtccctaattataagaccc 13153956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 28572045 - 28572074
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  28572045 atactccctccgtccctaattataagaccc 28572074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 28579638 - 28579667
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  28579638 atactccctccgtccctaattataagaccc 28579667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 34568489 - 34568518
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  34568489 atactccctccgtccctaattataagaccc 34568518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 227
Target Start/End: Complemental strand, 40741563 - 40741534
Alignment:
Q  198 tatactccctccgtccctaattataagacc 227  Q
    ||||||||||||||||||||||||||||||    
T  40741563 tatactccctccgtccctaattataagacc 40741534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 44250858 - 44250887
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  44250858 atactccctccgtccctaattataagaccc 44250887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 51132 - 51104
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagaccc 51104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 1774342 - 1774370
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  1774342 tactccctccgtccctaattataagaccc 1774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 2152281 - 2152249
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||| ||||||||||||||||||||||||    
T  2152281 tatatactacctccgtccctaattataagaccc 2152249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 2944309 - 2944281
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagaccc 2944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 8951465 - 8951437
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  8951465 tactccctccgtccctaattataagaccc 8951437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 11798902 - 11798874
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  11798902 tactccctccgtccctaattataagaccc 11798874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 13154225 - 13154197
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  13154225 tactccctccgtccctaattataagaccc 13154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 18455720 - 18455748
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  18455720 tactccctccgtccctaattataagaccc 18455748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 26990566 - 26990594
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  26990566 atactccctccgtccctaattataagacc 26990594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 28192212 - 28192184
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagaccc 28192184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 28965768 - 28965736
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    ||||||||| |||||||||||||||||||||||    
T  28965768 tatatactctctccgtccctaattataagaccc 28965736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 29279195 - 29279223
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  29279195 tactccctccgtccctaattataagaccc 29279223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 39029178 - 39029206
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagaccc 39029206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 42885054 - 42885082
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  42885054 tactccctccgtccctaattataagaccc 42885082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 43653943 - 43653971
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  43653943 tactccctccgtccctaattataagaccc 43653971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 56264550 - 56264379
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  56264550 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 56264451  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  56264450 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 56264379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 6643412 - 6643269
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  6643412 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttag 6643313  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| ||||||||||||  |||||||||||||||||    
T  6643312 ggctagcccgaatgggccgcgggtattccgttagcccgcataac 6643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 53724853 - 53725007
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||     
T  53724853 tatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagccca 53724952  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  53724953 gtacccattagggctagcccgaatgggccgcgggtagcccgtgagcccgcataac 53725007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 401487 - 401334
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||| |||    
T  401487 tatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagctcggcccttaaaagcccg 401388  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  401387 gtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 401334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 35392748 - 35392892
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||| | ||||||||||||||| ||||||||| |||    
T  35392748 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaataggactttttaacccggcccttaaaagcccggtacccgtta 35392847  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35392848 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 35392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 50097395 - 50097539
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||| |||| ||||||||||||||||||| ||||||| |||    
T  50097395 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagtccgaattttaaaagggctttttagcccggcccttaaaagtctggtacccgtta 50097494  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50097495 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50097539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 15194480 - 15194623
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  15194480 ccgtttagctcgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 15194579  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  15194580 ggctagcccgaatgggccgcgggtagcccgttagcccgcataac 15194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 53925315 - 53925485
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||  |||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  53925315 caaaacgggccgggccgtatgggccggtccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 53925414  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  53925415 cggcccttaaaaatccggtacccgttagggctagcccgaacgggccatgggtagcccgttagcccgcataa 53925485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 51435703 - 51435550
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||| ||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  51435703 atgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 51435604  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  51435603 tacccgttaaggctagcccgaatgggccgcgggtagcccgttagcccgcataac 51435550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 26707027 - 26706883
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||||||| |||    
T  26707027 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgtta 26706928  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  26706927 gggctagcccgaatgggccgcgggtagcccgttagtccgcataac 26706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 54094106 - 54093962
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||||||||||||||| |||| | ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  54094106 cccgtttaacccgaataaatatagggcttgggcttaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 54094007  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  54094006 gggctagcccgaatgggctgcgggtagcccgttagcccgcataac 54093962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19823790 - 19823619
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || ||  |||| ||| |||||||||||||||||||||||||| ||||  |||||||||| ||| ||||||||||||||| |||| || |    
T  19823790 caaaacgggccgggccgaatgggccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcacgaattttaatagggctttttagac 19823691  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19823690 cggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtaacccgttagcccgcataac 19823619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 24678272 - 24678416
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||| | |||  ||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  24678272 cccgtttagcccgaataaatatagagcttgagcctaaaatattgagctcgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 24678371  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  24678372 gggctagcccgaatgagccgcgggtagcccgttagcccgcataac 24678416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 39240540 - 39240400
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||| ||    
T  39240540 tttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagagc 39240441  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  39240440 tagcccgaatgggccgcgggtagcccgttagcccgcataac 39240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 39809738 - 39809594
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||    
T  39809738 cccgtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtatccgtta 39809639  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
T  39809638 gagctagcccgaatgggccgcgggtagcccgttagcccgcataac 39809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 40731348 - 40731191
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||| ||||    
T  40731348 caaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccggattttaatagggctttttagcc 40731249  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| ||| ||||| |||||||||| ||||| |||||||||||||||||    
T  40731248 cggcccttaaaagcccgttacccgttagggctagtccgaatgggccgcgggtagcccg 40731191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 35666583 - 35666713
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| ||||||||| |||    
T  35666583 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttaccccggcccttaaaagcccggtacccgtta 35666682  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| |||||||||||||||||    
T  35666683 gggctagcccgaatgggccgcgggtagcccg 35666713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 19521883 - 19521739
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||| ||||| | ||||||||| ||| ||||| |||    
T  19521883 cccgtttagtccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatggggctttttagcccagtccttaaaagcccgatacccgtta 19521784  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  19521783 gggctagcccgaatgggccgcgggtaacccgttagcccgcataac 19521739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 30000248 - 30000392
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||  |||| ||||| ||||||||||| | ||||||| |||    
T  30000248 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaataggcctttttagcccagcccttaaaagcctggtacccgtta 30000347  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  30000348 gggctagcccgaatgggccgctggtagcccgttagcccgcataac 30000392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 16623462 - 16623606
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||| ||||| |||    
T  16623462 cccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgtta 16623561  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||| | |||||||| |||||||||||||    
T  16623562 gggctagcccgaacgggccgagagtagcccgctagcccgcataac 16623606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 34435894 - 34436037
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||| ||| |||| || |||||||||||||| ||||||||  |||    
T  34435894 cccgtttagcccgaataaatat-gggcttgggcctaaaatattgagcccgaattttaatggggctttttagtccggcccttaaaagcccggtacctgtta 34435992  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  34435993 gggctagcccgaatgggccgcgggtagcctgttagcccgcataac 34436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 1139135 - 1138978
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||||||||||||||||||||||||||  ||| ||||||||||| ||||| ||||||||||||| |||| ||||    
T  1139135 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcctgggcctaaaatattgagcccaaattttaatagggctttttagcc 1139036  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||  |||||||| ||||||| ||| |||| |||||||||||||||||    
T  1139035 cggcccttaaaagctcggtacccgttagggccagctcgaatgggccgcgggtagcccg 1138978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 18861751 - 18861623
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||| |||| ||  ||||||||||||| ||| ||||| |||    
T  18861751 cccgtttagcccgaataaatat--ggtttgggcctaaaatattgagcccgaattttaatagggctttttagttcggcccttaaaagcccgatacccgtta 18861654  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||||||||||||||||||||    
T  18861653 gggctagcccgaacgggccgcgggtagcccg 18861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 56114312 - 56114169
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| ||||  ||||||||||||| |||| ||||||| ||| ||||| ||||||||| ||||    
T  56114312 ccgtttagcccgattaattatagggcttgggccttaaatattgagcctaaattttaatagggctttttagcccggtcctaaaaagcccggtacccgttag 56114213  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  56114212 ggctagcccgaacgggccacgggtagcccgttagcccgcataac 56114169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 44871639 - 44871486
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    ||||| || |||||||||||||| ||| ||||||||||||  || ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| | |     
T  44871639 atggatcggcccgtttagcccgattaattatagggtttgggtcttaaatattgagctcgaattttaatagggctttttagcccggccctaaaaagcctgc 44871540  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  44871539 tacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44871486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 41140601 - 41140749
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||| ||||||||||||| ||| |||| || |||  ||| ||||||| ||||||||||||||||||| |||| | ||||||||| ||||| || ||||||    
T  41140601 ccgatccgtttagcccgattaattataaggcttgagccttaaatattgagcccgaattttaatagggctttttaacccggccctaaaaagccccgtaccc 41140700  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||    
T  41140701 gttagggctagcccgaacgggccgcgggtagcccgttcgcccgcataac 41140749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 13563506 - 13563374
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||            ||||||||||||| ||||||||| |||    
T  13563506 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtacccgtta 13563419  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  13563418 gggctagcccgaatgggccgcgggtagtccgttagcccgcataac 13563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 48152691 - 48152847
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || ||  |||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||     
T  48152691 caaaacgggccggcccggatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagc- 48152789  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
                  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48152790 --------------ccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48152847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 36694222 - 36694112
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||   ||| ||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||    
T  36694222 cccgtttagcccgaataaatataggacatgggcctaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagcccggtacccgtta 36694123  T
Q  128 gggctagcccg 138  Q
    |||||||||||    
T  36694122 gggctagcccg 36694112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 19474806 - 19474665
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| ||| ||||||| |||| ||| ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  19474806 cccgtttaacccgattaattatagggcttgggccttaaatattgagctcgaattttaatagggctttttagcccggccctaaaaagcccggtacccatta 19474707  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcat 169  Q
    ||||||  ||||||||||||||||||||| ||||||| ||||    
T  19474706 gggctaatccgaacgggccgcgggtagcctgttagccagcat 19474665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 41883259 - 41883116
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| |||||||||||| ||| ||||||| ||| ||||||||||||||| |||| ||||||| ||| ||||| ||| || || |||    
T  41883259 cccgtttagcccgattaattatagggtttgggccttaaatattgagctcgaattttaatagggctttttagcccggacctaaaaagcccgctatccgtta 41883160  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||    
T  41883159 gggccagcccgaacgggccgagggtagcacgctagcccgcataa 41883116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 56519969 - 56520111
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| |||||| |||| ||||| ||||||||| ||||    
T  56519969 ccgtttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttag 56520068  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||||| ||||||| || ||||||||||||||| |||||||    
T  56520069 ggatagcccaaacgggctgc-ggtagcccgttagcctgcataac 56520111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 32555678 - 32555822
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||  |||| ||| ||||||| ||| ||||||||||||||| || | ||||||| ||| ||||| ||| ||||| |||    
T  32555678 cccgtttagcccgattaattataggtcttgggccttaaatattgagctcgaattttaatagggcttcttagcccggtcctaaaaagcccgctacccgtta 32555777  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||    
T  32555778 gggctagtccgaacgggccgagggtagcccgctagcccgcataac 32555822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 33493230 - 33493102
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    ||||||| |||| ||| |||||||||| | ||| ||||||| ||| | ||||||||||| | |||| ||||||||||| ||||||||||||||| |||||    
T  33493230 cgtttagtccgattaattatagggttttggccttaaatattgagctcaaattttaatagagctttttagcccggccctaaaaagtccggtacccgttagg 33493131  T
Q  130 gctagcccgaacgggccgcgggtagcccg 158  Q
    ||||| |||||||||||| ||||| ||||    
T  33493130 gctagtccgaacgggccgtgggtaacccg 33493102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 49480751 - 49480861
Alignment:
Q  62 taaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgtta 161  Q
    ||||||||| ||||| ||||||||||||| |||| || ||||||||||||||  || ||||   |||||||||| |||||||||||||||||||||||||    
T  49480751 taaaatattgagcccaaattttaatagggctttttagtccggcccttaaaagctcgatacctaatagggctagctcgaacgggccgcgggtagcccgtta 49480850  T
Q  162 gcccgcataac 172  Q
    | |||||||||    
T  49480851 gtccgcataac 49480861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 45849299 - 45849438
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    |||||| ||||| ||| ||||||| |||| ||| ||||||| | |||||||||||||| ||||||| |||||| |||| |||| | |||||||| |||||    
T  45849299 cgtttaacccgattaattatagggcttgggccttaaatattgaacccgaattttaata-ggttttttagcccgaccctaaaaaattcggtacccgttagg 45849397  T
Q  130 gctagcccgaacgggccgc-gggtagcccgttagcccgcat 169  Q
    ||||||| ||| ||||| | |||||||||||||||||||||    
T  45849398 gctagcctgaatgggccacggggtagcccgttagcccgcat 45849438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 52278919 - 52278776
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| || |||| |||| ||| ||||||| ||| ||||||||||||||| ||   |||||| |||| ||||| ||| ||||| |||    
T  52278919 cccgtttagcccgattaattacagggcttgggccttaaatattgagctcgaattttaatagggcttcatagcccgaccctaaaaagcccgctacccgtta 52278820  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||  |||||||||| |||||||||||||    
T  52278819 gggctagcccgaa-gggccaagggtagcccgctagcccgcataac 52278776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 41831205 - 41831349
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| |||||||| |||||||| || ||||||| | ||||||| ||||||||  |||| |  |||| ||| ||||| ||| ||||| |||    
T  41831205 cccgtttatcccgattaaatataaggtttggatcttaaatattgaacccgaatattaataggactttttaatccggtcctaaaaagcccgctacccgtta 41831304  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||| || ||||| |||| || ||||||||||    
T  41831305 gggctagcccgaacgggtcgagggtaacccgctaacccgcataac 41831349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 51031641 - 51031728
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggccc 106  Q
    |||| ||| ||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||  |||| ||||||||||    
T  51031641 atgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggactttttagcccggccc 51031728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 4709252 - 4709381
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| |||||||||||||| ||||||   |||||||||| ||||||||||||||||||| |||| |||||||               ||||| |||    
T  4709252 cccgtttaccccgaataaatataaggtttgcgtctaaaatattgagcccgaattttaatagggctttttagcccgg---------------tacccgtta 4709336  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  4709337 gggctagcccgaatgggctgcgggtagcccgttagcccgcataac 4709381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 42248053 - 42248129
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttttt 95  Q
    |||| |||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||| |||||| ||||    
T  42248053 atgggccgacccgtttagcccgattaattatagggtttggaccttaaatattcagcccgaatttttatagggatttt 42248129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 6366349 - 6366444
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaag 113  Q
    ||||| ||| |||||||| ||||| ||| |||||||||||| ||| ||||||| ||||||||||||||||||| |||| |||| |||||| |||||    
T  6366349 tatgggccggcccgtttaacccgattaattatagggtttgggccttaaatattgagcccgaattttaatagggctttttagcctggccctaaaaag 6366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 24534741 - 24534651
Alignment:
Q  65 aatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcc 156  Q
    |||||| ||||||||||||||||| |||||| ||||||||| | ||||| ||| ||| | ||||||||||||||||||||||| ||||||||    
T  24534741 aatattgagcccgaattttaatagagttttt-agcccggccttaaaaagcccgctactcattagggctagcccgaacgggccgagggtagcc 24534651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16347011 - 16346855
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| ||  | ||||| ||| || |||||||| || ||| |||||||||||| ||| ||||||| |||||||||||||||| || |||| |||     
T  16347011 caaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaatatggatttttagc- 16346913  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
                  ||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16346912 --------------ccgatactctttagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 16346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 42587438 - 42587327
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    |||||||| ||  ||| ||||||| |||| ||||||||||||| ||||| ||| ||||| | ||||| ||   |||| ||||||||||| |||||| |||    
T  42587438 tatagggtctgagccttaaatattgagcctgaattttaataggattttttagctcggccttaaaaagcccaacacccattagggctagctcgaacgagcc 42587339  T
Q  147 gcgggtagcccg 158  Q
    ||||||||||||    
T  42587338 gcgggtagcccg 42587327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 48500377 - 48500306
Alignment:
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||| || ||||||| |||||| ||||||    
T  48500377 cggcccttaaaagcccgctacctgttagggctagcccgaacgggccgaggatagcccgctagcccacataac 48500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 31616634 - 31616494
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||||||| ||  ||||||||||  || ||||||  |||| | | ||||||| |||| |||||||||||||  ||||   ||||  ||| ||||| |||    
T  31616634 tatggaccggcctatttagcccgatcaattataggacttgggctttaaatattgagcctgaattttaataggactttttgacccgatcctaaaaagcccg 31616535  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |||| | |||||| ||||| |||||||||||||||||||||    
T  31616534 gtactcgttagggttagcctgaacgggccgcgggtagcccg 31616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 35013830 - 35013933
Alignment:
Q  55 ttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 154  Q
    |||| ||| ||||||| | |||||||||||||| |  |||| | |||||| || |||||   | ||||| ||||||||||||||||||||||| ||||||    
T  35013830 ttgggccttaaatattgaacccgaattttaatatgactttttaacccggctctaaaaagctagctacccgttagggctagcccgaacgggccgagggtag 35013929  T
Q  155 cccg 158  Q
    ||||    
T  35013930 cccg 35013933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 40226983 - 40226904
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccgg 103  Q
    ||||||||||||||| || ||| |||||||||||| ||| ||||||| ||  ||||||||||||| | |||| |||||||    
T  40226983 ccgacccgtttagcctgattaattatagggtttgggccttaaatattgaggtcgaattttaatagagctttttagcccgg 40226904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 4035822 - 4035853
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  4035822 atatactccctccgtccctaattataagaccc 4035853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 8907100 - 8907050
Alignment:
Q  122 cctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||||||| |||||||| |||||||||||||| ||| |||||||    
T  8907100 cctttggggctagcctgaacgggctgcgggtagcccgttcgcctgcataac 8907050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 20747468 - 20747439
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  20747468 atactccctccgtccctaattataagaccc 20747439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 24754074 - 24754103
Alignment:
Q  196 tatatactccctccgtccctaattataaga 225  Q
    ||||||||||||||||||||||||||||||    
T  24754074 tatatactccctccgtccctaattataaga 24754103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 45742844 - 45742815
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  45742844 atactccctccgtccctaattataagaccc 45742815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 4036122 - 4036094
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  4036122 tactccctccgtccctaattataagaccc 4036094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 4549629 - 4549657
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  4549629 tactccctccgtccctaattataagaccc 4549657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 5375594 - 5375566
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagaccc 5375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 5743696 - 5743668
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagaccc 5743668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 9328277 - 9328249
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9328277 tactccctccgtccctaattataagaccc 9328249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 20391474 - 20391446
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  20391474 tactccctccgtccctaattataagaccc 20391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 20455222 - 20455190
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||| ||||||||||||||||||||||||    
T  20455222 tatatactacctccgtccctaattataagaccc 20455190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 21265216 - 21265248
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||| ||||||||||||||||||||||||    
T  21265216 tatatactacctccgtccctaattataagaccc 21265248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 25708420 - 25708448
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  25708420 tactccctccgtccctaattataagaccc 25708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 26626039 - 26626011
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagaccc 26626011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 29014064 - 29014092
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  29014064 tactccctccgtccctaattataagaccc 29014092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 30771528 - 30771556
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  30771528 tactccctccgtccctaattataagaccc 30771556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 31290614 - 31290646
Alignment:
Q  128 gggctagcccgaacgggccgcgggtagcccgtt 160  Q
    |||||||||||| ||||||||||||||||||||    
T  31290614 gggctagcccgaccgggccgcgggtagcccgtt 31290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 32033030 - 32033002
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  32033030 tactccctccgtccctaattataagaccc 32033002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 32767598 - 32767722
Alignment:
Q  35 agcccgaataaa-tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggcta 133  Q
    |||||||||||| ||||||| |||| ||||| |  |  ||||||||||||   |||| |||| ||||||||||  ||||| |||| |||| ||| |||||    
T  32767598 agcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccggaacccgttaaggcta 32767697  T
Q  134 gcccgaacgggccgcgggtagcccg 158  Q
    |||||  |||||| |||| ||||||    
T  32767698 gcccgttcgggccacgggcagcccg 32767722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 33413518 - 33413546
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  33413518 tactccctccgtccctaattataagaccc 33413546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 34273256 - 34273228
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagaccc 34273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 35675957 - 35675929
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  35675957 tactccctccgtccctaattataagaccc 35675929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 39797429 - 39797461
Alignment:
Q  195 atatatactccctccgtccctaattataagacc 227  Q
    ||||||||| |||||||||||||||||||||||    
T  39797429 atatatactacctccgtccctaattataagacc 39797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 44294789 - 44294817
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagaccc 44294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 47806860 - 47806888
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagaccc 47806888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 52977982 - 52978010
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  52977982 tactccctccgtccctaattataagaccc 52978010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 53277222 - 53277194
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  53277222 tactccctccgtccctaattataagaccc 53277194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 55631999 - 55632027
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  55631999 tactccctccgtccctaattataagaccc 55632027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 9e-60; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 1346390 - 1346246
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  1346390 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 1346291  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  1346290 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1346246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27495855 - 27496026
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  27495855 caaaacggaccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 27495954  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27495955 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 27496026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 31742851 - 31743022
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| | |||| ||||    
T  31742851 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagagctttttagcc 31742950  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31742951 cggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 31743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 1002617 - 1002473
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| |||||||||| |||||| ||||||||| |||    
T  1002617 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagggctttttagcccggcccataaaagcccggtacccgtta 1002518  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  1002517 gggctagcccgaacgggccgtgggtagcccattagcccgcataac 1002473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 10261308 - 10261452
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||| | |||||||||| ||||||||| |||    
T  10261308 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcctgacccttaaaagcccggtacccgtta 10261407  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  10261408 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 10261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 35439646 - 35439504
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||    
T  35439646 cgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagg 35439547  T
Q  130 gctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||||||| || ||||||||||||||||||||||||||||    
T  35439546 gcaagcccgaagggaccgcgggtagcccgttagcccgcataac 35439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 36240874 - 36240734
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    |||||||||  |||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||    
T  36240874 tatggaccggtccgtttagcccgaataaatatagggtttgggcataaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccg 36240775  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  36240774 gtacccgttagggctagcccgaacgggccgcgggtagcccg 36240734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 30555614 - 30555785
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  30555614 caaaacgggccgggccgtatgggccgatccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatagggttttttagcc 30555713  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| || || ||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  30555714 cggccctaaaaagcccgctatccgttagggctagcccgaacggaccgagggttgcccgctagcccgcataac 30555785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 31618233 - 31618062
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||||||| ||||||| || ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  31618233 caaaacgggccgggccttatgggccgacccatttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 31618134  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| || ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31618133 cggctctaaaaagcccggtacccgttagggctagtccgaacgggccgcgggtagcccgttagcccgcataac 31618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 28222916 - 28223054
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    ||||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||| |||| |||||||| |||||||| ||||||||| |||||||    
T  28222916 tttagcccgaataaatatagggtctgggcctaaaataatgagcccgaattttaatagggctttttagcccggctcttaaaagcccggtacccgttagggc 28223015  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcata 170  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  28223016 tagcccgaacaggccgcgggtagcccgttagtccgcata 28223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 29810705 - 29810845
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| | |    
T  29810705 tatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggatttttagcccggcccttaaaagcctg 29810804  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  29810805 gtacccgttagggctagcacgaatgggccgcgggtagcccg 29810845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 45517162 - 45517306
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||| | |||| |||||| ||| |||||| |||||||||  ||    
T  45517162 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagagctttttagcccgacccataaaagcccggtacccgata 45517261  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  45517262 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 45517306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12848002 - 12847831
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||||| |||||| ||||| ||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||| ||||    
T  12848002 caaaacgggccggcccgtatgggccgacacgtttatcccgattaaatatagggcttgggccttaaatattgagcccgaattttaataggattttttagcc 12847903  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||  ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  12847902 cggccctaaaaagcccactacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 12847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 10440139 - 10440269
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||  |||    
T  10440139 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacctgtta 10440238  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| |||||||||||||||||    
T  10440239 gggctagcccgaatgggccgcgggtagcccg 10440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 38962342 - 38962213
Alignment:
Q  43 taaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacg 142  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  38962342 taaatatagggcttgagcctaaaatattgagcccgaattttaatagggtttttcagcccggctcttaaaagtccggtacctgttagggctagcccgaacg 38962243  T
Q  143 ggccgcgggtagcccgttagcccgcataac 172  Q
    ||||  ||||||||||||| ||||||||||    
T  38962242 ggccaagggtagcccgttaacccgcataac 38962213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 10822390 - 10822246
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||  ||||||||| |||    
T  10822390 cccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaaacccggtacccgtta 10822291  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  10822290 gggctagcccgaacgggccgcgggtagcttgttagcccgcataac 10822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26984605 - 26984434
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||| ||||| |||||||||||||||| ||| ||||||| || |||||||||||||||| |||| | ||    
T  26984605 caaaacgggctgggccgtatgggccggcccgtttaccccgattaaatatagggtttgggccttaaatattgagtccgaattttaatagggctttttaacc 26984506  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| | ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  26984505 cggccttaaaaagcccgctacccattagggctagcccgaacgggccgagggtagcccgctagcccgcataac 26984434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 13247727 - 13247857
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||| ||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  13247727 cccgtttagcccgaataaatatggggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 13247826  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||| ||| |||||||||||||||||    
T  13247827 gggctagcctgaatgggccgcgggtagcccg 13247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 30016336 - 30016206
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| |||    
T  30016336 cccgtttagtctgaataaatatagggcttgggcctaaaatattaagcccgaattttaatagggctttttagcccagcccttaaaagcccggtacccatta 30016237  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    ||| ||||||||| |||||||||||||||||    
T  30016236 gggttagcccgaatgggccgcgggtagcccg 30016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 42799504 - 42799657
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||| ||||| ||||| ||||| ||||| |||    
T  42799504 tatgggccgacccgtttagaccgattaattatagggcttgggccttaaatattgagcccgaattttaataggtttttt-agcccagccctaaaaagcccg 42799602  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42799603 gtacccgttaggactagcccgaacgggccgcgggtagctcgttagcccgcataac 42799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 27551946 - 27552103
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || |||||||||||||||||| ||| ||||||| |||| | | ||||||| |||| |||||||||||||| |||| ||||    
T  27551946 caaaacgggccgggccttacgggccgacccgtttagcccgattaattatagggcttgggctttaaatattgagcctgaattttaatagggctttttagcc 27552045  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  27552046 cggccctaaaaagcccggtacccattagggctagcccgaacgggccgcgggtagcccg 27552103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 23334041 - 23334189
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| || |||||||| ||||| ||| |||||    
T  23334041 ccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggatttttagtccggccctaaaaagcccgctaccc 23334140  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  23334141 gttagggctagcccgaacggaccgagggtagcccgctagcccgcataac 23334189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 30801318 - 30801174
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||| || | |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  30801318 cccgtttagcccgaataaataaagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 30801219  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||| ||||  ||||| |||||| | |||||||||||||||    
T  30801218 gggctagctcgaataggccgtgggtagtcagttagcccgcataac 30801174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 2650186 - 2650055
Alignment:
Q  42 ataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaac 141  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| ||||||||||||||||     
T  2650186 ataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggctagcccgaat 2650087  T
Q  142 ggg-ccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||| |||||||||||||||||||||||    
T  2650086 gggcccgcaggtagcccgttagcccgcataac 2650055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 34313729 - 34313880
Alignment:
Q  21 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 120  Q
    |||||| |||||||||||||| ||| ||||||| |||| ||| ||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| | ||    
T  34313729 ggaccggcccgtttagcccgattaattatagggcttgggccttaaatattaagcccaaattttaatagggctttttagcccggccctaaaaagtctgcta 34313828  T
Q  121 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||||||||||| ||||||| || |||||||||| |||||||||||||    
T  34313829 cccgttagggctagcctgaacgggtcgagggtagcccgctagcccgcataac 34313880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 41644263 - 41644434
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || || ||||||||| ||||||||||||||  || || |||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  41644263 caaaacggaccgggccgtatggaccggcccgtttagcccgataaattacagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 41644362  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||| ||||||||| ||||| |||||| |||||||||||||||| |||||||||| |||||||||||||    
T  41644363 cgaccctaaaaagtccgctacccgttaggggtagcccgaacgggccgagggtagcccgctagcccgcataac 41644434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 18258172 - 18258032
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||||||||||||||  |||| ||||||||||| || |||||||||||||||| |||| | ||||||||||||||| |||    
T  18258172 tatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagtccgaattttaatagggctttttaccccggcccttaaaagcccg 18258073  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||| ||||||||| | ||||||||||||| ||||||||    
T  18258072 gtacccgttagggctacctcgaacgggccgcgagtagcccg 18258032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 25869044 - 25868901
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| |||| || |||| ||| ||||||| ||||||||||||||||||| |||| ||||||| ||| ||||| ||| || || ||||    
T  25869044 ccgtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagcccgctatccattag 25868945  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||    
T  25868944 ggctagcccgaacgggccgagggtagcccgctagcccacataac 25868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 2557655 - 2557799
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||| || ||| ||||||| |||| ||| ||||||| ||||||||||||||||| |||||| ||||| ||||| ||||| ||| ||||| |||    
T  2557655 cccgtttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaatagagttttttagcccagccctaaaaagcccgctacccgtta 2557754  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||| || ||||||  ||||||||| |||||||||||||    
T  2557755 gggctagcccaaatgggccgatggtagcccgctagcccgcataac 2557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 19944914 - 19944766
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||||| ||| ||||||| |||  | | ||||||| ||||||| |||||| |||| |||| ||||||| ||| |||||||||||||      
T  19944914 ccgacccgtttagcccgattaattatagggcttgtgctttaaatattgagcccgatttttaagagggctttttagcccggtcctaaaaagtccggtacaa 19944815  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  19944814 attagggctagcccgaacgggctgcgggtagctcgttagcccacataac 19944766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 37209654 - 37209506
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||| ||||||| ||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||||||| | ||||||||| ||||    | ||  |    
T  37209654 ccgatccgtttaacccgattaattatagggcttgggcctgaaatattgagcccgaattttaatagggttttttaacccggccctaaaaatcaagatattc 37209555  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37209554 gttagggctaacccgaacgggccgcgggtagcccgttagcccgcataac 37209506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 13311525 - 13311652
Alignment:
Q  31 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    ||||||||||| ||| ||||||| |||| | | ||||||| || |||||||||||| ||| |||| | ||||||||| ||||| ||||||||| ||||||    
T  13311525 gtttagcccgattaattatagggcttgggctttaaatattgagtccgaattttaattgggctttttaacccggccctaaaaagcccggtacccattaggg 13311624  T
Q  131 ctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||||||||||||||||||    
T  13311625 ctagcccgaacgggccgcgggtagcccg 13311652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 27258928 - 27258811
Alignment:
Q  55 ttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 154  Q
    |||| ||| ||||||| |||||| |||||||||||| |||| |||||| |||| ||| | ||||||  | ||||||||||||||||||||||||||||||    
T  27258928 ttgggccttaaatattgagcccgtattttaatagggctttttagcccgaccctaaaatgcccggtattcgttagggctagcccgaacgggccgcgggtag 27258829  T
Q  155 cccgttagcccgcataac 172  Q
    ||||||||||||||||||    
T  27258828 cccgttagcccgcataac 27258811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 10709745 - 10709889
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| || | |||||||||||||| |||| | |||| |||| ||||| ||| ||||| |||    
T  10709745 cccgtttagcccgattaattatagggcttgggccttaaatattgagtctgaattttaatagggctttttaacccgaccctaaaaaggccgctacccgtta 10709844  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||    
T  10709845 gggctagcccgaacgggccgaaggtagcccgctcgcccgcataac 10709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 20932597 - 20932462
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| |||||||||||||| || |||| ||||||||||| ||||||||||| ||||||| |||| ||||| ||||         ||||| || |||    
T  20932597 cccgtttaacccgaataaatataaggcttgggcctaaaatattgagcccgaatttgaatagggctttttagcccagccc---------cggtatccgtta 20932507  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  20932506 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 20932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 12017599 - 12017480
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||||||||||| |||||||||| |||||||| || |||  ||| ||||||| ||||| |||||||| |||| |||| |||||| |||| ||||| |||     
T  12017599 atggaccgacccatttagcccgattaaatataaggcttgagccttaaatattgagcccaaattttaaaagggctttttagcccgaccctaaaaagcccgc 12017500  T
Q  119 taccctttagggctagcccg 138  Q
    ||||| ||||||||||||||    
T  12017499 tacccgttagggctagcccg 12017480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 37209009 - 37208889
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| || ||||||||||| ||| |||| |  |||| ||| ||||||| | |||||||||||||||||||||| | ||||||||| ||||  |||    
T  37209009 tatgggccggcctgtttagcccgattaattatacgacttgggccttaaatattgaccccgaattttaatagggttttttatcccggccctaaaaaacccg 37208910  T
Q  118 gtaccctttagggctagcccg 138  Q
    |||||| || ||| |||||||    
T  37208909 gtacccgtttgggttagcccg 37208889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9439401 - 9439274
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || ||| |||||||||||| | ||| ||||||  |||| ||| ||| ||| ||||||||||||||||||| |||| ||||    
T  9439401 caaaacgggccgggccctacgggccggcccgtttagcccaattaattataggacttgggccttaaacattgagcccgaattttaatagggctttttagcc 9439302  T
Q  101 cggcccttaaaagtccggtaccctttag 128  Q
    ||||| | |||| | |||||||| ||||    
T  9439301 cggccttaaaaaattcggtacccgttag 9439274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 20252205 - 20252238
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||||    
T  20252205 atatatactccctccgtccctaattataagaccc 20252238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 41450513 - 41450544
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  41450513 atatactccctccgtccctaattataagaccc 41450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 16108213 - 16108243
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  16108213 tatactccctccgtccctaattataagaccc 16108243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 34062704 - 34062674
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  34062704 tatactccctccgtccctaattataagaccc 34062674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 39833737 - 39833767
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  39833737 tatactccctccgtccctaattataagaccc 39833767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 4711723 - 4711756
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||| |||||||    
T  4711723 atatatactccctccgtccctaattaaaagaccc 4711756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 11201682 - 11201711
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  11201682 atactccctccgtccctaattataagaccc 11201711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 11617243 - 11617210
Alignment:
Q  191 ttatatatatactccctccgtccctaattataag 224  Q
    |||||||||||||||||||||||| |||||||||    
T  11617243 ttatatatatactccctccgtcccaaattataag 11617210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 22182962 - 22182933
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  22182962 atactccctccgtccctaattataagaccc 22182933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 34883886 - 34883857
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  34883886 atactccctccgtccctaattataagaccc 34883857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 40607701 - 40607730
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  40607701 atactccctccgtccctaattataagaccc 40607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 1360090 - 1360062
Alignment:
Q  198 tatactccctccgtccctaattataagac 226  Q
    |||||||||||||||||||||||||||||    
T  1360090 tatactccctccgtccctaattataagac 1360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 2199974 - 2200006
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||| ||||||||||||||||||||||||    
T  2199974 tatatactacctccgtccctaattataagaccc 2200006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 2438225 - 2438253
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagaccc 2438253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 2438522 - 2438494
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  2438522 tactccctccgtccctaattataagaccc 2438494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 5664637 - 5664665
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  5664637 atactccctccgtccctaattataagacc 5664665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 7491844 - 7491872
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  7491844 tactccctccgtccctaattataagaccc 7491872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 7492141 - 7492113
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  7492141 tactccctccgtccctaattataagaccc 7492113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 8716929 - 8716901
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  8716929 tactccctccgtccctaattataagaccc 8716901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 17408331 - 17408303
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  17408331 tactccctccgtccctaattataagaccc 17408303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 22897688 - 22897660
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  22897688 tactccctccgtccctaattataagaccc 22897660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 23789268 - 23789240
Alignment:
Q  198 tatactccctccgtccctaattataagac 226  Q
    |||||||||||||||||||||||||||||    
T  23789268 tatactccctccgtccctaattataagac 23789240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 25624732 - 25624760
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  25624732 atactccctccgtccctaattataagacc 25624760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 27560206 - 27560234
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagaccc 27560234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 34113823 - 34113795
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  34113823 tactccctccgtccctaattataagaccc 34113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 36131065 - 36131037
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagaccc 36131037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 45474351 - 45474379
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  45474351 tactccctccgtccctaattataagaccc 45474379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37471662 - 37471491
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  37471662 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggctttttagcc 37471563  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37471562 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 37471491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32795687 - 32795858
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||  |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  32795687 caaaacgggccggcccgtatgggccagcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagcc 32795786  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32795787 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 32795858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 36992158 - 36992311
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  36992158 atggaccggcccgtttagcctgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccgg 36992257  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || || |||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  36992258 tatccgttagggctagcccgaatgggccgcaggtagcccgttagtccgcataac 36992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 34202771 - 34202628
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  34202771 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcca-aattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 34202673  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34202672 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 34202628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 555872 - 555728
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||| |||||||||  |||||||| |||    
T  555872 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttaacccgggccttaaaagctcggtacccgtta 555773  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  555772 gggctagtccgaacgggccgtgggtagcccgttagcccgcataac 555728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 39560505 - 39560649
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||||| |||    
T  39560505 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgtta 39560604  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  39560605 gggctagcccgaatgggccgcgggtagcccgttcgcccgcataac 39560649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 8613754 - 8613897
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  8613754 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 8613853  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||    
T  8613854 ggctagctcgaatgggctgcgggtagcccgttagcccgcataac 8613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24764164 - 24764335
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| ||  | ||||| ||| ||||||||||| |||||||||||||| |||| |||||||||||  | |||||||||||||||| |||| ||||    
T  24764164 caaaacgggccgggtcgtatgggccggcccgtttagcctgaataaatatagggcttgggcctaaaatattgtgtccgaattttaatagggctttttagcc 24764263  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24764264 cggcccttaaaagcccggtatccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 24764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 47761827 - 47761670
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| |  || ||||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  47761827 caaaacgggccgacccgtatggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 47761728  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||    
T  47761727 cggcccttaaaagcccggtacccgttagggctagcccgaataggccgcgggtagcccg 47761670  T

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Target: chr7; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 29507945 - 29508089
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||| |||| || ||||||||||||| | |||||||| |||    
T  29507945 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagctagaattttaatagggctttttagtccggcccttaaaaattcggtacccgtta 29508044  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29508045 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 29508089  T

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Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 3699181 - 3699320
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||| ||||||||| ||||||||| ||||    
T  3699181 ccgtatagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttaacccggtccttaaaagcccggtacccgttag 3699280  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgca 168  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3699281 ggctagcccgaatgggccgcgggtagcccgttagcccgca 3699320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 37085730 - 37085901
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| ||||| |||||   | || ||||||| ||||||||||||| | |||| ||||||||||| ||||||||||||||||||  |||| ||||    
T  37085730 caaaacgggccggaccgtatgggttggcctgtttagcacgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggactttttagcc 37085829  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37085830 cggcccttaaaagtctggtacccgttagggctagcccgaacgggccgcgggtagcccgttaacccgcataac 37085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 35528521 - 35528351
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || ||||| || |||  ||||||||||||| ||| ||||||| |||||||| ||||||| | |||||||||||||||||||||| ||||    
T  35528521 caaaacgggccgggccatacggtccggtccgtttagcccgattaattatagggcttggaccttaaatattgatcccgaattttaatagggttttttagcc 35528422  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35528421 cggccctaaaaagcccggtacccgttagggctagcctgaacgggccgcgggtagcccgttagcctgcataa 35528351  T

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Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 30072015 - 30072169
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||| ||||| |||||| |||| |||    
T  30072015 tatgggccggcccgtttaacccgaataaatatagggcttggacctaaaatattgagcccaaattttaatagggctttttagcccagccctttaaagcccg 30072114  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  30072115 ttacccgttagggctaacccgaacgggctgcgggtagcccgttagcccgcataac 30072169  T

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Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 5215691 - 5215835
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||| ||||||||||||||| |||| ||||| ||||||||||| |||||| || |||    
T  5215691 cccgtttagcccgaataaatatagggtttgggtttaaaatattgagctcgaattttaatagggctttttagcccagcccttaaaagcccggtatccgtta 5215790  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||  |||| ||||||||||||||||||||||| |||||||    
T  5215791 gggctagttcgaatgggccgcgggtagcccgttagcctgcataac 5215835  T

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Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 33889216 - 33889360
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| | |||| ||||||||||||||||| ||||||  | |||    
T  33889216 cccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagagctttttagcccggcccttaaaagcccggtattcgtta 33889315  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||| ||||||| ||||| |||||| |||||||||    
T  33889316 gggctagcccgaacaggccgcgcgtagctcgttaggccgcataac 33889360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13598046 - 13598217
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||||||||  | || ||||||| | |||||||||||||| ||| ||||||| |||| ||| ||||||| || |||||||||||||||| |||| ||||    
T  13598046 caaaacgggccaggccgtatggactggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggctttttagcc 13598145  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| || || ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13598146 cggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 13598217  T

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Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 32528115 - 32527976
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    ||||||| || ||| ||||||| |||||||| ||||||| ||||| |||||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||    
T  32528115 tttagcctgattaattatagggcttggaccttaaatattgagcccaaattttaataggcttttt-agcccggtcctaaaaagtccggtacccgttagggc 32528017  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  32528016 tagcccgaacgggccacgggtagcccgttagcctgcataac 32527976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 9697129 - 9696997
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||            ||||||||||||| ||||||||| |||    
T  9697129 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtacccgtta 9697042  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  9697041 gggctagcccgaatgggccgcgggtagtccgttagcccgcataac 9696997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 47099150 - 47099284
Alignment:
Q  24 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||| ||||||||||||| || | ||||||||||| |||||||||||||| |||| |||| |||||||||||||||   | |||||||    
T  47099150 ccgacccgtttagcccaaataaatatagggcttaggcctaaaatattgagcccgaattttaacagggctttttagcccggcccttaaatacctggtaccc 47099249  T
Q  124 tttagggctagcccgaacgggccgcgggtagcccg 158  Q
     |||||||||||||||||||||| |||||||||||    
T  47099250 gttagggctagcccgaacgggccacgggtagcccg 47099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8781458 - 8781611
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || |||||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  8781458 caaaacgggtcgggccatatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 8781557  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 154  Q
    ||| ||| ||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  8781558 cggtcctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtag 8781611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 17195484 - 17195641
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| || |||||||||| || || |||| ||||    
T  17195484 caaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttactatggctttttagcc 17195583  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17195584 cgaccctaaaaagtccggtacccgttagggctagcccgaacgggccgcgggtagcccg 17195641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 33590396 - 33590279
Alignment:
Q  21 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 120  Q
    |||||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||    
T  33590396 ggaccggcccgtttagcccgaataaatatagagcttgggcctaaaatatttagcccgaattttaatagggctttttagcccggcccttaaaagctcggta 33590297  T
Q  121 ccctttagggctagcccg 138  Q
    ||| ||||||||||||||    
T  33590296 cccattagggctagcccg 33590279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 42976701 - 42976845
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||| | ||| ||||||| ||||  || ||||||| ||||| ||||||||||||| |||| |||| |||||| |||||   ||||||| |||    
T  42976701 cccgtttagcccaattaattatagggcttgggtcttaaatattgagcccaaattttaatagggctttttagcctggccctaaaaagataggtacccatta 42976800  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42976801 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 42976845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33627068 - 33626898
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||| |||| || ||||| || ||||||| |||||||| | ||||||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  33627068 caaaatgggccggcccatacggtccgacccatttagcccaattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 33626969  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||| ||||  ||| ||||| ||||||||||| ||||||||| | |||||||||| ||||| ||||||    
T  33626968 cggccctaaaaaccccgctacccgttagggctagctcgaacgggctgagggtagcccgctagcctgcataa 33626898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 3319143 - 3319007
Alignment:
Q  36 gcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagc 135  Q
    |||||| ||| ||||||| ||||  || ||||||| |||||||||||||||||||| ||| ||||||||||| ||||| ||||||||| |||||||||||    
T  3319143 gcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatagggtcttttagcccggccctaaaaagcccggtacccgttagggctagc 3319044  T
Q  136 ccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||| || |||||||||||  ||||||||||    
T  3319043 ccgaacgggctgcaggtagcccgtttacccgcataac 3319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 15457303 - 15457160
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||  |||| ||| ||||||| ||||| ||||||||||||| |||| |||| |||||| ||||| ||||||||| |||    
T  15457303 cccgtttagcccgattaattataggccttgggccttaaatattgagcccaaattttaatagggctttttagccgggccctaaaaagcccggtacccgtta 15457204  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||    
T  15457203 gggcta-ccccaacgggccgcgggtagcccgttagctcgcataac 15457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 31325370 - 31325514
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||| ||||| | |||| ||| ||||||| || ||||||| ||||||||||||| |||||||| || |||| || |||||||  ||    
T  31325370 cccgtttagcccgaataattatagcgcttgggccttaaatattgagtccgaattgtaatagggttttttagcccggcactaaaaactctggtacccgata 31325469  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  31325470 gggctagcccgaatgggctgcgggtagcccattagcccgcataac 31325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 40685749 - 40685628
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || |||||  || |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  40685749 caaaacgggccggtccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 40685650  T
Q  101 cggcccttaaaagtccggtacc 122  Q
    || |||||||||| ||||||||    
T  40685649 cgacccttaaaagcccggtacc 40685628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 22791895 - 22791769
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    ||||||| | || ||| ||||||| | |||||||||||||||||||||| |||||| |||| ||||  | ||||||| ||||||||||||||||||||||    
T  22791895 tatagggctcgggccttaaatattgaacccgaattttaatagggttttttagcccgaccctaaaaaacctggtacccgttagggctagcccgaacgggcc 22791796  T
Q  147 gc-gggtagcccgttagcccgcataac 172  Q
    || ||||||||||||||||||||||||    
T  22791795 gcggggtagcccgttagcccgcataac 22791769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 2370869 - 2370744
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    |||||| ||||| ||| ||||||||||||  || ||||||| |||| |||||||||||||| |||| ||| ||||||| ||||||||||||| | |||||    
T  2370869 cgtttaacccgattaattatagggtttgggtcttaaatattgagcctgaattttaatagggctttttagctcggccctaaaaagtccggtactcgttagg 2370770  T
Q  130 gctagcccgaacgggccgcgggtagc 155  Q
    ||||||||||||| ||||||||||||    
T  2370769 gctagcccgaacgagccgcgggtagc 2370744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 34349680 - 34349820
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| |||| || || || || ||||| ||| || || |||||||    
T  34349680 tttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggctttttagtccagctctaaaaagcccgctatccgttagggc 34349779  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||||||| ||| |||||||||||||||||| |||||    
T  34349780 tagtccgaacggaccgagggtagcccgttagcccgtataac 34349820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 34182182 - 34182088
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||| |||| ||||||||||||||||| |||||||||    
T  34182182 cccgtttagcccgaataaatatagggtttgggcctaaaatattgag-ccaaattttaatagggctttttagcccggcccttaaaagcccggtaccc 34182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 36863263 - 36863400
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||| ||| ||| ||||| | |||| ||| ||||||| ||||| |||||| |||||| |||||||||||||||| ||| | | ||||||| |||||||    
T  36863263 tttagcacgattaattatagagcttgggccttaaatattgagccctaatttttatagggcttttcagcccggccctaaaaggccaggtacccgttagggc 36863362  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcat 169  Q
    ||| |||||||||||||||||| ||||||| |||||||    
T  36863363 tagtccgaacgggccgcgggtatcccgttaacccgcat 36863400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 48137348 - 48137246
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| | ||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  48137348 caaaacgggccgggccgtatgggcagactcgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 48137249  T
Q  101 cgg 103  Q
    |||    
T  48137248 cgg 48137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 8632778 - 8632903
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    |||||||||||| ||| |||| ||||||||||||||| |||||| |||| ||||||    | ||||| | ||||||| ||||||||||||||||||||||    
T  8632778 tatagggtttgggccttaaattttaagcccgaatttttatagggatttttagcccgagattgaaaagcctggtacccgttagggctagcccgaacgggcc 8632877  T
Q  147 gcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||||| | ||||||||    
T  8632878 gcgggtaacccgttacctcgcataac 8632903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 46817180 - 46817041
Alignment:
Q  31 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    ||||||| ||| ||| |||||||||||| ||| ||||||| ||| |||||||||||| ||||||| | ||||  ||| |||||||| |||||| ||||||    
T  46817180 gtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaata-ggttttttaacccgatcctaaaaagtccagtacccattaggg 46817082  T
Q  131 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| ||||  |||||  ||||||||||||||||||||||||    
T  46817081 ctag-ccgagagggccatgggtagcccgttagcccgcataac 46817041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 49112476 - 49112335
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagccc-gaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||| ||| ||||||  |||| ||| || |||||| ||| ||||||| | |||| |||| |||||| |||| |||||| |||||||| |||    
T  49112476 ccgtttagcccgattaattataggtcttgggccttaagtattaatccccgaatttttacagggctttt-agcccgaccctaaaaagttcggtacccgtta 49112378  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcata 170  Q
    | |||||||||||||||||||| ||| | ||||||||||||||    
T  49112377 gagctagcccgaacgggccgcgagtatctcgttagcccgcata 49112335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 23108543 - 23108684
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||| || | ||| ||||||| || | ||| ||||||| |||| ||||||||||||| ||||| ||||||| ||| ||||||| |||| || |||    
T  23108543 cccgtttagtccaattaattatagggcttaggccttaaatattcagccggaattttaataggattttttagcccggtcctaaaaagtctggtatccgtta 23108642  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcat 169  Q
     |||||| ||||||||| ||  |||||| |||||||||||||    
T  23108643 tggctagtccgaacgggtcgtaggtagcacgttagcccgcat 23108684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 40683542 - 40683489
Alignment:
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||| |||||    
T  40683542 tacccgttagggctagcccgaatggcccgcgggtagcccgttagcccgtataac 40683489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 18834339 - 18834231
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    |||||||||||| ||| ||||||| |||   || ||||||| ||   |||||||||||||| |||| |||| |||||| |||||| || ||||| |||||    
T  18834339 cgtttagcccgattaattatagggcttgagtcttaaatattgagtttgaattttaatagggctttttagcctggccctaaaaagttcgctacccgttagg 18834240  T
Q  130 gctagcccg 138  Q
    |||||||||    
T  18834239 gctagcccg 18834231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 36698176 - 36698140
Alignment:
Q  192 tatatatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||||||    
T  36698176 tatatatatactccctccgtccctaattataagaccc 36698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 48949655 - 48949603
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaat 80  Q
    |||||| ||||||||||||||||||| |||| ||||||||||| |||||||||    
T  48949655 cccgttcagcccgaataaatatagggcttgggcctaaaatattgagcccgaat 48949603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 28061019 - 28060986
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||||    
T  28061019 atatatactccctccgtccctaattataagaccc 28060986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 29286087 - 29286046
Alignment:
Q  187 taaattatatatatactccctccgtccctaattataagaccc 228  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  29286087 taaattatgaatatactccctccgtccctaattataagaccc 29286046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 48949602 - 48949549
Alignment:
Q  105 ccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    ||||||||| ||||||||  ||||||||||||| || |||||||||||||||||    
T  48949602 ccttaaaagcccggtacctgttagggctagcccaaatgggccgcgggtagcccg 48949549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 44547421 - 44547453
Alignment:
Q  195 atatatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||||    
T  44547421 atatatactccctccgtccctaattataagacc 44547453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 10013386 - 10013252
Alignment:
Q  37 cccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcc 136  Q
    ||||| ||| |||| || |||| ||| ||||||| |||||  ||||| |||||| |||| |||||| |||| |||||  |||||||| || |||||||||    
T  10013386 cccgattaactatacggcttgggccttaaatattgagccctgatttttatagggctttttagcccg-ccctaaaaagcacggtacccgtttgggctagcc 10013288  T
Q  137 cgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |  ||| | | ||| ||||||||||||||||||    
T  10013287 cgtattggcagtgagtaacccgttagcccgcataac 10013252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 40921678 - 40921631
Alignment:
Q  125 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||||    
T  40921678 ttagggctagcctgaacgggctgagggtagcccgctagcccgcataac 40921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 20075146 - 20075116
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  20075146 tatactccctccgtccctaattataagaccc 20075116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 38858296 - 38858326
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  38858296 tatactccctccgtccctaattataagaccc 38858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 225
Target Start/End: Complemental strand, 29177293 - 29177264
Alignment:
Q  196 tatatactccctccgtccctaattataaga 225  Q
    ||||||||||||||||||||||||||||||    
T  29177293 tatatactccctccgtccctaattataaga 29177264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 32814432 - 32814461
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  32814432 atactccctccgtccctaattataagaccc 32814461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 33858904 - 33858875
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  33858904 atactccctccgtccctaattataagaccc 33858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 39871651 - 39871622
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  39871651 atactccctccgtccctaattataagaccc 39871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 19920563 - 19920591
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagaccc 19920591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 21295151 - 21295179
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagaccc 21295179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 26255096 - 26255124
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  26255096 tactccctccgtccctaattataagaccc 26255124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 27813492 - 27813524
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||| ||||||||||||||||||||||||    
T  27813492 tatatactacctccgtccctaattataagaccc 27813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 32872412 - 32872384
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  32872412 tactccctccgtccctaattataagaccc 32872384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 34979116 - 34979088
Alignment:
Q  198 tatactccctccgtccctaattataagac 226  Q
    |||||||||||||||||||||||||||||    
T  34979116 tatactccctccgtccctaattataagac 34979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 36643394 - 36643446
Alignment:
Q  86 tagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 138  Q
    ||||| |||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  36643394 tagggctttttaccccggccctaaaaagcccggtacccgttagggctagcccg 36643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 38428444 - 38428416
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  38428444 tactccctccgtccctaattataagaccc 38428416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 39197718 - 39197746
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  39197718 tactccctccgtccctaattataagaccc 39197746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 40300230 - 40300258
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagaccc 40300258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 41026133 - 41026105
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagaccc 41026105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 41252398 - 41252370
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagaccc 41252370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 48521029 - 48521057
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  48521029 tactccctccgtccctaattataagaccc 48521057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7949865 - 7949694
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||  ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  7949865 caaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccaaattttaatagggttttttagcc 7949766  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  7949765 cggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagtcagcataac 7949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 28759482 - 28759338
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  28759482 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 28759383  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  28759382 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28759338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26264529 - 26264358
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||  ||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||| |||| ||||    
T  26264529 caaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttgggcctaaattattgagcccgaattttaatagggctttttagcc 26264430  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26264429 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26264358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 20122706 - 20122848
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  20122706 ccgtttagcccgaataaatatagggcttggacctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 20122805  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  20122806 ggctagcccgaatgggccgcgggtaacccgttagcccgcataa 20122848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 26507207 - 26507378
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||| || |||||||| |||| ||||||| |||||| |||| ||||    
T  26507207 caaaacgggcaggcccatatgggccggcccgtttagcccgaataaatatagggcttgggccgaaaatattgagcctgaattttgatagggctttttagcc 26507306  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  26507307 cggcccttaaaagcccggtacccgttagggttagaccgaatgggccgcgggtagcccgttagcccgcataac 26507378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24566198 - 24566369
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  24566198 caaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 24566297  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24566298 cggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24566369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24607234 - 24607405
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||    
T  24607234 caaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcc 24607333  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24607334 cggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24607405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 1840657 - 1840513
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||||| || |||    
T  1840657 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtatccgtta 1840558  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  1840557 ggactagcccgaatgggccgcgggtagcccgttagcccgcataac 1840513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 39479343 - 39479487
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||| || |||| ||||||||||| ||||| ||||||||| |||    
T  39479343 cccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatatggctttttagcccggccctaaaaagcccggtacccgtta 39479442  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  39479443 gggctagcccgaacgggccgcgggtagcccgttagcccgcgtaac 39479487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 27345374 - 27345231
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||||| ||||    
T  27345374 ccgtttagcccgaataaatatagggcttgggcataaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttag 27345275  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    | |||||||||| |||||||||||||||||||||||||||||||    
T  27345274 gactagcccgaatgggccgcgggtagcccgttagcccgcataac 27345231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 16748942 - 16749096
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| |||| | |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||  |||||||||||||||| |||    
T  16748942 tatgggccgatctgtttagcccgaataaatataggatttgggcctaaaatattgagcccgaattttaatagggcttttttgcccggcccttaaaagcccg 16749041  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  16749042 atacccgttagggctagcccgaatgggccgcgggtagcccgttagcccacataac 16749096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 5361293 - 5361142
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||  ||    
T  5361293 tatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccgttaaaagcacg 5361194  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcata 170  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  5361193 gtacccgtta-ggctagcccgaacgggccgcgagtagcccgttagcccgcata 5361142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 16653904 - 16654048
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||| |||| ||| ||||||||||||| || |||||| |||    
T  16653904 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagggctttttagcacggcccttaaaagcccagtacccgtta 16654003  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  16654004 gggctagcccgaatgggccgcgggtagccagttagcccgcataac 16654048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 43320638 - 43320498
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||  ||||||||||||||| || |||||||||||||| | ||||||| |||||||    
T  43320638 tttagcccgaataaatatagggtttgggcttaaaatattgagcccgatatttaatagggttttttagtccggcccttaaaagcctggtacccgttagggc 43320539  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  43320538 tagcccgaatgggccgcgggtagcccgttagcccgcataac 43320498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 7074103 - 7073962
Alignment:
Q  31 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    |||||| |||||||||||||||| |||  ||||||||||| |||||||||||||||||| ||||| || |||| ||||||||||||||||||| ||||||    
T  7074103 gtttagtccgaataaatatagggcttgagcctaaaatattgagcccgaattttaataggattttttagaccggtccttaaaagtccggtacccattaggg 7074004  T
Q  131 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  7074003 ctagtccgaacgggccgcgggtagcccgttagcctgcataac 7073962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 2466418 - 2466288
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  2466418 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2466319  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
     |||||||||||| || ||||||||||||||    
T  2466318 tggctagcccgaatggaccgcgggtagcccg 2466288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 17320367 - 17320511
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||| ||||| ||| || |||| |||| ||| ||||||| |||||| |||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  17320367 cccgtttaacccgattaattacagggcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagcccggtacccgtta 17320466  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17320467 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 17320511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18922131 - 18922302
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || | ||| ||| |||||||||||||| ||| ||||||| ||||  || ||||||| |||||||||||||||| ||||||| ||||    
T  18922131 caaaacgggccgggccgtgtgggccggcccgtttagcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatatggttttttagcc 18922230  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  18922231 cggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 18922302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 2800752 - 2800615
Alignment:
Q  16 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 115  Q
    ||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| ||| ||||||||||||| |    
T  2800752 catatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcc 2800654  T
Q  116 cggtaccctttagggctagcccgaacgggccgcgggtag 154  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  2800653 cggtacccgttaggtctagcccgaacgggccgcgggtag 2800615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 2806921 - 2806784
Alignment:
Q  16 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 115  Q
    ||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| ||| ||||||||||||| |    
T  2806921 catatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcc 2806823  T
Q  116 cggtaccctttagggctagcccgaacgggccgcgggtag 154  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  2806822 cggtacccgttaggtctagcccgaacgggccgcgggtag 2806784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21162811 - 21162640
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||  |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| ||||||| |||| ||||    
T  21162811 caaaacgggccgggccgtatgggcccgcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggctttttagcc 21162712  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| ||| ||||| ||| ||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  21162711 cggacctaaaaagcccgctacccgttagggccagcccgaacgggccgagggtagcccgctagcccgcataac 21162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 17016470 - 17016624
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| |||    
T  17016470 tatgggccggcccgtttagcccgattaattatagggattgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccg 17016569  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||| || ||||||| |||||||||||| |||||||||| |||||| ||||||    
T  17016570 ctacccgtttgggctagaccgaacgggccgagggtagcccgctagcccacataac 17016624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 1463066 - 1463208
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||    |||| ||||||||||| || |||||||||||||||| |||| ||||||||||||||  | ||||||||| |||    
T  1463066 cccgtttagcccgaataaatataaaacttgggcctaaaatattgagtccgaattttaatagggctttttagcccggcccttaa--gcccggtacccgtta 1463163  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  1463164 gggctagcccgaatgggccgcgggtagcccgttagtccgtataac 1463208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 36682861 - 36682732
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||| ||| ||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||||  |||    
T  36682861 ccgtttagctcgagtaaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagcccggctcttaaaagtccggtacccactag 36682762  T
Q  129 ggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||| ||||| |||||||||||    
T  36682761 ggctagcccgaatgggccacgggtagcccg 36682732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 14506014 - 14505870
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||| | |||| ||| ||||||| |||||| |||||||||||| |||| ||||||||||| ||||||||| ||||| |||    
T  14506014 cccgtttagcccgattaattatagagcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagtccgctacccgtta 14505915  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| |||||||||||| ||| |||||||||| |||||||||||||    
T  14505914 gggttagcccgaacggaccgagggtagcccgctagcccgcataac 14505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7344827 - 7344656
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | || || ||||| ||| |||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||    
T  7344827 caaaacggaccgggccgtatgggccggcccgtttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggctttttagcc 7344728  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| | | ||||| ||| ||||| ||||||| ||||||||||| ||| |||||||||  |||||||||||||    
T  7344727 cggacttaaaaagcccgctacccgttagggccagcccgaacggaccgagggtagcccactagcccgcataac 7344656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21151868 - 21151697
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| ||||||| |||| ||||    
T  21151868 caaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggctttttagcc 21151769  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| ||| ||||| | | ||||| ||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  21151768 cggacctaaaaagcctgctacccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21151697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21159003 - 21158832
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| ||||||| |||| ||||    
T  21159003 caaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggctttttagcc 21158904  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||| ||| ||||| ||| || || ||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  21158903 cggacctaaaaagcccgctatccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21158832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 5494666 - 5494760
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 123  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  5494666 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagtccggtaccc 5494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 8320607 - 8320477
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||||| || | ||| ||||||| ||||||||||||||||||| |||| ||||||||||| |||||  |||||| | |||    
T  8320607 cccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagctcggtactcgtta 8320508  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||||||||||||||||||||    
T  8320507 gggctagcccgaacgggccgcgggtagcccg 8320477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 4725178 - 4725320
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| || | ||| ||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||| ||||| ||||    
T  4725178 ccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagggttttt-agcccggtcctaaaaagtccgctacccgttag 4725276  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||| ||| ||||||| || || ||||||||||    
T  4725277 ggctagcccgaacggaccgagggtagctcgctaacccgcataac 4725320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 24316547 - 24316677
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||| | |||||||||||||||| ||| ||||||| || | |||||||||||||| |||| ||||||| ||| ||||||||| ||||| |||    
T  24316547 cccgtttagcccaactaaatatagggtttgggccttaaatattgagtctgaattttaatagggctttttagcccggtcctaaaaagtccgctacccgtta 24316646  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||| ||||| ||||||||||    
T  24316647 gggctagcccgaacaggccgagggtagcccg 24316677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 39048670 - 39048810
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| |||| || |||  ||| ||||||| | |||||||||||||||||||||| |||||| |||| ||||| ||||||||   ||    
T  39048670 cccgtttagcccgattaattatatggcttgagccttaaatattgaacccgaattttaatagggttttttagcccgaccctaaaaagcccggtacctgcta 39048769  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcat 169  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  39048770 gggctag-ccgaacgggccgcgggtagcccgttagcccgcat 39048810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 38063040 - 38062946
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaag 113  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||  |||| |||||||||||||||||    
T  38063040 tatggaccgacccgtttaacccgaataaatatagggtttgggcctaaaatattgagctcgaattttaataggcctttt-agcccggcccttaaaag 38062946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 41203444 - 41203305
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| |||    |||||||||||| |||| ||||||||||| || || | ||||||  ||||    
T  41203444 ccgtttagcccgattaattatagggcttgggccttaaatattgagc----attttaatagggctttttagcccggccctaaagagccgggtacctgttag 41203349  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  41203348 ggctagcccgaacgggccgcgggtagcctgttagtccgcataac 41203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 7827081 - 7826924
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||| | ||||| ||||| ||| |||||||||| ||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||| | |||| ||||    
T  7827081 caaaacggaccggaccgtatgggccggcccgtttagctcgattaattatagggcttgggccttaaatattgagcccgaattttaatagtgctttttagcc 7826982  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 158  Q
    |  |||| |||||  || ||||| |||| |||||||||||||||||| ||||||||||    
T  7826981 caaccctaaaaagctcgctacccgttagagctagcccgaacgggccgagggtagcccg 7826924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 39088998 - 39089070
Alignment:
Q  99 cccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39088998 cccggcccttaaaagcccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 39089070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 8321755 - 8321827
Alignment:
Q  100 ccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8321755 ccggccctaaaaagcccgatacccgttagggctagcccgaacgggccgcgggtagcccgttagcccacataac 8321827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 6286172 - 6286247
Alignment:
Q  97 agcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||| |||||||| ||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||    
T  6286172 agcccggctcttaaaagcccggtacccgtaagggctagcccgaatgggccgcgggtagtccgttagcccgcataac 6286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 19647014 - 19646925
Alignment:
Q  83 taatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||| |||| ||||||||||| ||||| ||| ||||| ||||||||||||| ||||||||| |||||||||| | |||| ||||||    
T  19647014 taatagggctttttagcccggccctaaaaagcccgctacccgttagggctagcccaaacgggccgagggtagcccgctggcccacataac 19646925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 31878193 - 31878069
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    |||||||||||   || ||||||| ||| |||||||| ||||||||||| ||||||  ||| ||||  ||||||||| |||||| |||||||||| ||      
T  31878193 tatagggtttgagtcttaaatattgagctcgaatttttatagggttttttagcccgatcctcaaaatcccggtacccgttagggatagcccgaaccggtt 31878094  T
Q  147 gcgggtagcccgttagcccgcataa 171  Q
    ||||||||| |||||||| ||||||    
T  31878093 gcgggtagctcgttagcctgcataa 31878069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 9528744 - 9528662
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaa 112  Q
    |||||| ||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| || | ||||||||||| ||||    
T  9528744 cgtttaacccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggcttgttagcccggccctaaaaa 9528662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 39087669 - 39087786
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| |||||||  |||||| || ||| |||||||||||| ||| ||||||| ||| || |||||||||||| |||| | ||||| ||| ||||| |||    
T  39087669 tatgggccgacccaattagcctgattaattatagggtttgggccttaaatattgagctcggattttaatagggctttttaacccggtcctaaaaagcccg 39087768  T
Q  118 gtaccctttagggctagc 135  Q
    |||| | ||||| |||||    
T  39087769 gtactcgttaggactagc 39087786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 39754441 - 39754541
Alignment:
Q  72 agcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    |||| |||||||||||||| |||| ||||||| ||| ||| | ||  ||||| ||||||||||||| ||||||||| |||||| | | ||||| ||||||    
T  39754441 agcctgaattttaatagggctttttagcccggtcctaaaaggccctctacccgttagggctagccctaacgggccgagggtagtctgctagcctgcataa 39754540  T
Q  172 c 172  Q
    |    
T  39754541 c 39754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 7726369 - 7726488
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||||||| |||| | ||||||||||| | ||| | |||| ||| ||||||| ||||| ||||||||||||  |||| || |||||||| ||||| | ||    
T  7726369 atggaccggcccgataagcccgaataattgtagagcttgggccttaaatattgagcccaaattttaataggactttttagtccggccctaaaaagccagg 7726468  T
Q  119 taccctttagggctagcccg 138  Q
    || || ||| ||||||||||    
T  7726469 tatccgttatggctagcccg 7726488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 39088952 - 39088994
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatatt 70  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  39088952 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 39088994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 22527687 - 22527720
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||||    
T  22527687 atatatactccctccgtccctaattataagaccc 22527720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 186399 - 186367
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||    
T  186399 tatatactccctccgtccctaattataagaccc 186367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 40004450 - 40004418
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||    
T  40004450 tatatactccctccgtccctaattataagaccc 40004418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 34662201 - 34662232
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  34662201 atatactccctccgtccctaattataagaccc 34662232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 6673267 - 6673237
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  6673267 tatactccctccgtccctaattataagaccc 6673237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 13661159 - 13661129
Alignment:
Q  197 atatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||    
T  13661159 atatactccctccgtccctaattataagacc 13661129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 14913646 - 14913676
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  14913646 tatactccctccgtccctaattataagaccc 14913676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 16440929 - 16440959
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  16440929 tatactccctccgtccctaattataagaccc 16440959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 26894912 - 26894882
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  26894912 tatactccctccgtccctaattataagaccc 26894882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 5494758 - 5494795
Alignment:
Q  135 cccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  5494758 cccgaatgggccgcgggtagcccgttagtccgcataac 5494795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 6286128 - 6286177
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccg 77  Q
    ||||||||| ||||||||||||| || |||| ||||||||||| ||||||    
T  6286128 cccgtttagtccgaataaatataaggcttgggcctaaaatattgagcccg 6286177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 9020693 - 9020722
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  9020693 atactccctccgtccctaattataagaccc 9020722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Complemental strand, 15190855 - 15190826
Alignment:
Q  197 atatactccctccgtccctaattataagac 226  Q
    ||||||||||||||||||||||||||||||    
T  15190855 atatactccctccgtccctaattataagac 15190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 16127258 - 16127287
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  16127258 atactccctccgtccctaattataagaccc 16127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 26889588 - 26889621
Alignment:
Q  195 atatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||| |||||    
T  26889588 atatatactccctccgtccctaattataggaccc 26889621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 227
Target Start/End: Original strand, 32147292 - 32147321
Alignment:
Q  198 tatactccctccgtccctaattataagacc 227  Q
    ||||||||||||||||||||||||||||||    
T  32147292 tatactccctccgtccctaattataagacc 32147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 1265949 - 1265977
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagaccc 1265977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 7951562 - 7951590
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  7951562 tactccctccgtccctaattataagaccc 7951590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 9828393 - 9828421
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagaccc 9828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 9828690 - 9828662
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9828690 tactccctccgtccctaattataagaccc 9828662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 10734560 - 10734532
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  10734560 tactccctccgtccctaattataagaccc 10734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 16441233 - 16441205
Alignment:
Q  194 tatatatactccctccgtccctaattata 222  Q
    |||||||||||||||||||||||||||||    
T  16441233 tatatatactccctccgtccctaattata 16441205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 42273860 - 42273828
Alignment:
Q  192 tatatatatactccctccgtccctaattataag 224  Q
    ||||||||||||||||||||||| |||||||||    
T  42273860 tatatatatactccctccgtcccaaattataag 42273828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 4171054 - 4170901
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  4171054 atgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 4170955  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4170954 tacccgttagggctagcctgaatgggccgcgggtagcccgttagcccgcataac 4170901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 2703134 - 2702963
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  2703134 caaaacgggccggcccgtatgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 2703035  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  2703034 cggcccttaaaagcccagtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 2702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 2067144 - 2067288
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  2067144 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2067243  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  2067244 gggctagcccgaatgggccgcgggtagcccgttagtccgcataac 2067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 22988281 - 22988137
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  22988281 cccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 22988182  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  22988181 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 22988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 23800115 - 23800259
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  23800115 cccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 23800214  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  23800215 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 23800259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17547471 - 17547642
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||  |||| ||||    
T  17547471 caaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggactttttagcc 17547570  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  17547571 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggctagcccgttagcccgcataac 17547642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 29641183 - 29641012
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  29641183 caaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 29641084  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||| ||||| ||||||||| |||||| ||||||| ||||||||||| |||||||||||    
T  29641083 cggcccttaaaagcccgatacccgttagggctatcccgaatgggccgcaggtagcccgttggcccgcataac 29641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 26555341 - 26555184
Alignment:
Q  15 ccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagt 114  Q
    |||||||| ||  |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||     
T  26555341 ccatatgggccagcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagc 26555242  T
Q  115 ccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  26555241 ccggtacccgttagggttagcccgaatgggccgcgggtagccagttagcccgcataac 26555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 31511362 - 31511197
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  31511362 caaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 31511263  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccg 166  Q
    ||||||||||||| ||| ||||| ||||||||| ||| || |||||||||||||||||||||||||    
T  31511262 cggcccttaaaagcccgatacccgttagggctatcccaaatgggccgcgggtagcccgttagcccg 31511197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 9035210 - 9035066
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||| ||||||||| |||    
T  9035210 cccgtttagcccgaacaaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcacggcccttaaaagcccggtacccgtta 9035111  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  9035110 gggctatcccgaatgggccgcgggtagcccgttagcccgcataac 9035066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 15183884 - 15183712
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||||||| ||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  15183884 caaaacgggccgggccgtatgggccggcccgttttgccagaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcc 15183785  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag-cccgttagcccgcataac 172  Q
    ||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15183784 cggcctttaaaagcccggttcccgttagggctagcccgaacgggccgcgggtagccccgttagcccgcataac 15183712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 15068131 - 15067987
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    ||||||||||| |||||||||||||| |||  ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  15068131 cccgtttagcctgaataaatatagggcttgtgcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 15068032  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| |||| || ||| |||||||||||| ||||||||||||||    
T  15068031 gggcttgcccaaatgggtcgcgggtagcccattagcccgcataac 15067987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 32897227 - 32897086
Alignment:
Q  31 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 130  Q
    ||||||||||| ||| ||||||| |||  ||| ||||||| |||||||||||||||| || |||| ||||| | ||| ||||||||||||||| ||||||    
T  32897227 gtttagcccgattaattatagggcttgagccttaaatattgagcccgaattttaataaggctttttagcccagtcctaaaaagtccggtacccgttaggg 32897128  T
Q  131 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32897127 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 32897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 12577434 - 12577291
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||  ||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||| ||||| ||||| | ||||||| |||    
T  12577434 cccgtttagcccgattatttatagggcttggaccttaaatattgagcccgaattttaatagggctttttagcccagccctaaaaagcctggtacccgtta 12577335  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  12577334 gggctagcccgaac-ggccgcgggtagcccgttagcccgcataac 12577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 29034583 - 29034472
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  29034583 tatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggctagcccgaacgggcc 29034484  T
Q  147 gcgggtagcccg 158  Q
    ||||||||||||    
T  29034483 gcgggtagcccg 29034472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 13835919 - 13836065
Alignment:
Q  26 gacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctt 125  Q
    |||||||||||||||| ||| ||||||| |||| ||| |||||||||  |||||||||  ||||| |||| ||||||||||| ||||| ||| ||||| |    
T  13835919 gacccgtttagcccgattaattatagggcttgggccttaaatattaaatccgaattttcgtagggctttttagcccggccctaaaaagcccgatacccgt 13836018  T
Q  126 tagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  13836019 tagggctagcccggacgggccgcagatagcccgttagcccacataac 13836065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34178412 - 34178539
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||| |||| ||||    
T  34178412 caaaacgggtcgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaatagggctttttagcc 34178511  T
Q  101 cggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| | ||||||| ||||    
T  34178512 cggcccttaaaagcctggtacccgttag 34178539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 21036066 - 21036196
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||| | ||||||||| |||||| ||| ||||||| ||||||||||||||||||| |||| ||||||||| | ||||| | | ||||  |||    
T  21036066 cccgtttagcccaactaaatatagagtttgggccttaaatattgagcccgaattttaatagggctttttagcccggccttaaaaagcctgctacctgtta 21036165  T
Q  128 gggctagcccgaacgggccgcgggtagcccg 158  Q
    |||||||||||||||| ||| ||||||||||    
T  21036166 gggctagcccgaacggaccgagggtagcccg 21036196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 26483659 - 26483784
Alignment:
Q  47 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 146  Q
    ||||||| |||  ||| ||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||| |||||||      
T  26483659 tatagggcttgagccttaaatattgagccctaattttaatagggttttttagcccggccctaaaaagtccggtatccgttagggctagcctgaacgggat 26483758  T
Q  147 gcgggtagcccgttagcccgcataac 172  Q
    |||| ||||||||||| | |||||||    
T  26483759 gcggatagcccgttagactgcataac 26483784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 28985265 - 28985422
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| |||| || || |||| || ||| ||||||  |||| ||| |||| || ||| || ||||| |||||| |||| ||||| ||||| ||||| |||    
T  28985265 tatgggccgatccattaagcctgattaattataggacttgggccttaaattttgagcacggatttttatagggctttttagccctgccctaaaaagcccg 28985364  T
Q  118 gtaccctttagggctagcccgaacgg---gccgcgggtagcccgttagcccgcataac 172  Q
    |||| | |||||||||||||| | ||   ||||| |||||||||||||||||||||||    
T  28985365 gtacacgttagggctagcccgtatgggccgccgccggtagcccgttagcccgcataac 28985422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 13087814 - 13087871
Alignment:
Q  115 ccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  13087814 ccggtactcgttagggctagcccgaacaggccgcgggtagcccattagcctgcataac 13087871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 13087742 - 13087817
Alignment:
Q  29 ccgtttagcccgaataaatataggg-tttggacctaaaatattaagcccgaattttaatagggtttttcagcccgg 103  Q
    ||||||||||||| ||| ||||||| ||||| ||| ||||||| ||||||||||||||||||  |||| |||||||    
T  13087742 ccgtttagcccgattaattatagggctttgggccttaaatattgagcccgaattttaataggactttttagcccgg 13087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 30248643 - 30248675
Alignment:
Q  196 tatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||||    
T  30248643 tatatactccctccgtccctaattataagaccc 30248675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 2289979 - 2290038
Alignment:
Q  85 atagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacggg 144  Q
    |||||| |||| ||||||||||| |||||  |||||||| |||||||||||| |||||||    
T  2289979 atagggctttttagcccggccctaaaaagctcggtacccgttagggctagcctgaacggg 2290038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 4844398 - 4844428
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  4844398 tatactccctccgtccctaattataagaccc 4844428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 5457409 - 5457439
Alignment:
Q  197 atatactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||||    
T  5457409 atatactccctccgtccctaattataagacc 5457439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 34741765 - 34741735
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  34741765 tatactccctccgtccctaattataagaccc 34741735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 12144076 - 12144047
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  12144076 atactccctccgtccctaattataagaccc 12144047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 231142 - 231114
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  231142 tactccctccgtccctaattataagaccc 231114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 8743188 - 8743216
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagaccc 8743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 9038642 - 9038670
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9038642 tactccctccgtccctaattataagaccc 9038670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 9388529 - 9388557
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  9388529 tactccctccgtccctaattataagaccc 9388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 9388829 - 9388801
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  9388829 atactccctccgtccctaattataagacc 9388801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 11847869 - 11847841
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  11847869 tactccctccgtccctaattataagaccc 11847841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 23397878 - 23397906
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  23397878 atactccctccgtccctaattataagacc 23397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 23398176 - 23398148
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  23398176 tactccctccgtccctaattataagaccc 23398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 31149979 - 31150015
Alignment:
Q  192 tatatatatactccctccgtccctaattataagaccc 228  Q
    |||||||||||| |||||||||||||||||| |||||    
T  31149979 tatatatatactacctccgtccctaattataggaccc 31150015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 34301869 - 34301841
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagaccc 34301841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27596 - 27767
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||| || || ||||| ||| ||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||| ||||  |||    
T  27596 caaaacgggccggtccgtatgggccggcccgtttagcccgaataaatataggatttgggtctaaaatattgagcccgaattttaatagggctttttcgcc 27695  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27696 cggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 27767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 40168 - 40024
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||| ||||||||||||||||| | ||||||| |||    
T  40168 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaatagggctttttagcccggcccttaaaagcctggtacccgtta 40069  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  40068 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 56204 - 56374
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    ||||||||||  | || ||||| ||| |||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||| ||||    
T  56204 caaaacgggccaggccgtatgggccggcccgtttatcccgaataaatatagggttggg-cctaaaatattgagcccgaattttaatagggctttttagcc 56302  T
Q  101 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  56303 cggcccttaaaatcccggtacccgttagggctagcccgaacgggccgcaggtagcccgttagcccgcataac 56374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 231783 - 231673
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||| ||| ||||| | |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| | | ||||| |||    
T  231783 cccgtttagcccgattaattatagagcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcctgctacccgtta 231684  T
Q  128 gggctagcccg 138  Q
    |||||||||||    
T  231683 gggctagcccg 231673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 7889 - 7751
Alignment:
Q  34 tagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggcta 133  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||     
T  7889 tagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggctt 7790  T
Q  134 gcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  7789 gcccgaatgggccgcgggtagcccgttaacccgcataac 7751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 950 - 1090
Alignment:
Q  32 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 131  Q
    |||||||| ||||||||||||| |||| ||||||||||| ||| ||||||||||||||| | || ||||||||||||||||| ||||||||| |||||||    
T  950 tttagcccaaataaatatagggcttgggcctaaaatattgagctcgaattttaatagggctctttagcccggcccttaaaagcccggtacccgttagggc 1049  T
Q  132 tagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  1050 tagcccgaatgggccgcgggtagcccgttagcccgcataac 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 12914 - 12770
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||| | |||| || |||    
T  12914 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagctcggcccttaaaagcctggtatccatta 12815  T
Q  128 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  12814 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 12770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 192 - 39
Alignment:
Q  19 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 118  Q
    |||| ||| ||||||||||||||||||||||| || ||||  |||||||||| |||| |||||||||||||  |||| ||||||||||||||||||||||    
T  192 atgggccggcccgtttagcccgaataaatataaggattgggtctaaaatattgagcctgaattttaataggaatttttagcccggcccttaaaagtccgg 93  T
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| |||||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  92 tacccgttagggctagcctgaatgggtcgcgggtagcccgttagcccccataac 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 2458 - 2317
Alignment:
Q  30 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 129  Q
    ||||||| |||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| ||||  | |||||||| || || ||||||||| |||||    
T  2458 cgtttaggccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggcttttttgtccggccctaaatagcccggtacccgttagg 2359  T
Q  130 gctagcccgaacgggccgcgggtagcccgttagcccgcataa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2358 gctagcccgaacgggccgcgggtagcccgttagcccgcataa 2317  T

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Target: scaffold0661 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 1688 - 1534
Alignment:
Q  18 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||| ||| |||| ||||||||||| ||||| |||    
T  1688 tatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaattgggctttttagcccggccctaaaaagcccg 1589  T
Q  118 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
     ||||  |||||||||||| |||||||||| |||||||||| |||||||||||||    
T  1588 ctacctgttagggctagcctgaacgggccgagggtagcccgctagcccgcataac 1534  T

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Target: scaffold0019 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 103222 - 103079
Alignment:
Q  29 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 128  Q
    ||||||||||||| ||| |||||||||||| | | ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||| || || ||||    
T  103222 ccgtttagcccgattaattatagggtttgggctttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccgctatccgttag 103123  T
Q  129 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||||||||||||||  | || ||| ||| |||||||||||||    
T  103122 ggctagcccgaacgggttgaggatagtccgctagcccgcataac 103079  T

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Target: scaffold1243 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 2012 - 2122
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 127  Q
    |||||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||| | || |||||| |||||| ||| ||||||||| |||    
T  2012 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagtccgaattttaatagggctatttagcccgacccttataagcccggtacccgtta 2111  T
Q  128 gggctagcccg 138  Q
    |||||||||||    
T  2112 gggctagcccg 2122  T

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Target: scaffold0173 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 22058 - 21970
Alignment:
Q  25 cgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaag 113  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  22058 cgacccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaag 21970  T

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Target: scaffold0461 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 2416 - 2501
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaag 113  Q
    |||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||||||||| |||||    
T  2416 cccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggctttttagcccggccctgaaaag 2501  T

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Target: scaffold0461; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 9352 - 9437
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaag 113  Q
    |||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| |||| ||||||||||| |||||    
T  9352 cccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggctttttagcccggccctgaaaag 9437  T

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Target: scaffold0951 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 1541 - 1645
Alignment:
Q  66 atattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagccc 165  Q
    ||||| ||||| |||||| ||||| ||||| | ||||||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||||||| |||||||    
T  1541 atattgagccctaatttttataggttttttaa-cccggccctaaaaagtc-ggtacccgttaggtctagccctaacgggccgcgggtagccctttagccc 1638  T
Q  166 gcataac 172  Q
     ||||||    
T  1639 acataac 1645  T

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Target: scaffold0583 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2210 - 2312
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 100  Q
    |||||||||  || || ||||| ||| ||| |||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||||||| ||||    
T  2210 caaaacgggtggggccgtatgggccggcccatttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggttttttagcc 2309  T
Q  101 cgg 103  Q
    |||    
T  2310 cgg 2312  T

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Target: scaffold0021 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 125964 - 125875
Alignment:
Q  28 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 117  Q
    |||||||||||||| ||| |||||||  ||| ||| ||||||| |||| |||||||||||||| |||| ||||||||||| |||||||||    
T  125964 cccgtttagcccgattaattatagggcctgggccttaaatattgagcctgaattttaatagggctttttagcccggccctaaaaagtccg 125875  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 121002 - 120949
Alignment:
Q  119 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    ||||| ||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  121002 tacccgttagggctaacccgaacgggccgatggtagcccgctagcccgcataac 120949  T

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Target: scaffold0079 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 45957 - 46006
Alignment:
Q  123 ctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45957 ctttagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 46006  T

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Target: scaffold0079; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45850 - 45936
Alignment:
Q  1 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaata 87  Q
    |||||||||| ||  | ||||| ||| || |||||||| || ||| |||||||||||| ||| ||||||| ||||||||||||||||    
T  45850 caaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaata 45936  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 51417 - 51464
Alignment:
Q  125 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 172  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||||    
T  51417 ttagggctagcctgaacgggctgagggtagcccgctagcccgcataac 51464  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 51722 - 51691
Alignment:
Q  197 atatactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  51722 atatactccctccgtccctaattataagaccc 51691  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 12063 - 12093
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  12063 tatactccctccgtccctaattataagaccc 12093  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 47638 - 47668
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  47638 tatactccctccgtccctaattataagaccc 47668  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 355370 - 355340
Alignment:
Q  198 tatactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||||    
T  355370 tatactccctccgtccctaattataagaccc 355340  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 259160 - 259131
Alignment:
Q  199 atactccctccgtccctaattataagaccc 228  Q
    ||||||||||||||||||||||||||||||    
T  259160 atactccctccgtccctaattataagaccc 259131  T

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Target: scaffold0604 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 3819 - 3791
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagaccc 3791  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 65378 - 65406
Alignment:
Q  200 tactccctccgtccctaattataagaccc 228  Q
    |||||||||||||||||||||||||||||    
T  65378 tactccctccgtccctaattataagaccc 65406  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 65675 - 65647
Alignment:
Q  199 atactccctccgtccctaattataagacc 227  Q
    |||||||||||||||||||||||||||||    
T  65675 atactccctccgtccctaattataagacc 65647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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