View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_high_66 (Length: 217)
Name: NF16629_high_66
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_high_66 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 22505722 - 22505539
Alignment:
| Q |
18 |
agttttcacttattatttagcatcttccgtttatacttgacatatttatatactgaattttgttgcatttatagtatatactttcgaaatctaatggttc |
117 |
Q |
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| T |
22505722 |
agttttcacttattatttagcatcttccgtttatacttgacatatttatatactgaattttgttgcatttatagtatatactttcgaaatctaatggttc |
22505623 |
T |
|
| Q |
118 |
tactacatgttcaagatatcgtttgtcatttaatatatttacgatttcggttaaagaattttagtactcttttccttatttctt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22505622 |
tactacatgttcaagatatcgtttgtcatttaatatatttacgatttcggttaaagaattttagtactcttttccttatttctt |
22505539 |
T |
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