View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_low_45 (Length: 272)
Name: NF16629_low_45
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 41264147 - 41264390
Alignment:
| Q |
1 |
ttgaaacatctggataatattattcacaagaaatgatcagcatccctcaagctgcacataacataggatctaatgtttgaatataatcttaactatcttg |
100 |
Q |
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| T |
41264147 |
ttgaaacatctggataatattattcacaagaaatgatcagcatccctcaagctgcacataacataggatctaatgtttgaatataatattaactatcttg |
41264246 |
T |
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| Q |
101 |
caagtcacattcaagatttgtgattagttgacacttggcagtgtaaaattttgcaaccatagttcatcaacattaaaatatagttgactatgtcaaattt |
200 |
Q |
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| T |
41264247 |
caagtcacatacaagatttgtgattagttgacacttggcagtgtaaaattttgcacccatagttcatcaacattaaaatatagttgactatgtcaaattt |
41264346 |
T |
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| Q |
201 |
taatacatataattaataaggccacaagctatgaaatacggatacaaa |
248 |
Q |
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||||||||| |||||||||||||||||||||||||| |||||||| |
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| T |
41264347 |
taatacata----taataaggccacaagctatgaaataccgatacaaa |
41264390 |
T |
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