View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_low_66 (Length: 235)
Name: NF16629_low_66
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_low_66 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 20186380 - 20186586
Alignment:
| Q |
17 |
aggagtttatatcttgtgtgaagccatgtaattttttctcaatatagcgcgagtgcacaaaatatgaagagaaaatacgttgttataataggcacttctt |
116 |
Q |
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| T |
20186380 |
aggagtttatatcttgtgtgaagccatgtaattttttctcaatatagcacgagtgcacaaaatatgaagagaaaatacgttgttataataggcacttctt |
20186479 |
T |
|
| Q |
117 |
gaacacacaatgtacacatataggcacttctagaacac--agatgtacacatatatgtgtatattactaaaaggtaatccaagatccaatatgtgtagtg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
20186480 |
gaacacacaatgtacacatataggcacttctagaacacatagatgtacacatatatgtgtatattactaataggtaatccaagatccaatatgtgtagtg |
20186579 |
T |
|
| Q |
215 |
tatatac |
221 |
Q |
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||||||| |
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| T |
20186580 |
tatatac |
20186586 |
T |
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