View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16629_low_74 (Length: 209)
Name: NF16629_low_74
Description: NF16629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16629_low_74 |
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Alignment Details
Target: chr6 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 9059721 - 9059859
Alignment:
| Q |
17 |
aaaattacaatgggctgattagatacatatttaaatttaaataagcaaagtaccactgacaagtggtatgaatttttcatctatatgataatgacaaatt |
116 |
Q |
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| T |
9059721 |
aaaattacaatgggctgattagatacatatttaaatttaaataagcaaagtaccactgacaagtggtatgaatttttcatctatatgataatgacaaatt |
9059820 |
T |
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| Q |
117 |
ttctaaccaagtgatatcttgaactaaaatagtaaatgg |
155 |
Q |
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| T |
9059821 |
ttctaaccaagtgatatcttgaactaaaatagtaaatgg |
9059859 |
T |
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