View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16630_low_14 (Length: 404)
Name: NF16630_low_14
Description: NF16630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16630_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 53 - 394
Target Start/End: Original strand, 28265181 - 28265521
Alignment:
| Q |
53 |
tattaatagatgtgtagttactaatactctttttctcaaaaaagagtcaactaattcgagaaagttcccacttgagtattcacaacgtgaaccgtaattt |
152 |
Q |
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| T |
28265181 |
tattaatagatgtgtagttactaatactcttttg-tcaaaaaagagtcaactaattcgagaaagttcccacttgagcattcacaacgtgaaccgtaattt |
28265279 |
T |
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| Q |
153 |
tcccgggaagatgacttcatcaaactatataagccctactctattcaatttttgaattttcagttagttacaatcacacacttcccgcgttccattcctt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28265280 |
tcccgggaagatgacttcatcaaactatataagccctactctattcaatttttgaattttcagttagttacaatcacacacttcccgcgttccattcctt |
28265379 |
T |
|
| Q |
253 |
ctcctctcgcacttctctcttccacacaccgacgaatccttctgcatcttcttcctctctcaggtttctctctccttctccacgcaaatctacctctgaa |
352 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28265380 |
ctcctctcgcacttctctcttccacacaccgacgaatccttctgcatcttcttcctctctcaggtttctctctccttctccacgcaaatctacctctgaa |
28265479 |
T |
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| Q |
353 |
tttgacgaatctgagctaaaactcctttcacatattcttcga |
394 |
Q |
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||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28265480 |
tttgacgaatctgagctaaaactcctttcacattttcttcga |
28265521 |
T |
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