View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16630_low_21 (Length: 326)

Name: NF16630_low_21
Description: NF16630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16630_low_21
NF16630_low_21
[»] chr1 (14 HSPs)
chr1 (22-132)||(34479234-34479344)
chr1 (248-310)||(34479462-34479524)
chr1 (250-307)||(50377301-50377358)
chr1 (250-305)||(21686846-21686901)
chr1 (250-307)||(1742254-1742311)
chr1 (250-307)||(7836858-7836915)
chr1 (250-299)||(10776531-10776580)
chr1 (257-305)||(34878342-34878390)
chr1 (261-307)||(14872624-14872670)
chr1 (24-110)||(34483910-34483996)
chr1 (250-307)||(5983809-5983866)
chr1 (250-307)||(7337725-7337782)
chr1 (24-96)||(34491896-34491968)
chr1 (250-294)||(47132873-47132917)
[»] chr7 (17 HSPs)
chr7 (21-96)||(3333086-3333161)
chr7 (262-307)||(45349861-45349906)
chr7 (250-305)||(39328854-39328909)
chr7 (250-307)||(48316874-48316931)
chr7 (250-305)||(30756883-30756938)
chr7 (25-94)||(3313984-3314053)
chr7 (250-307)||(8001608-8001665)
chr7 (250-303)||(19296842-19296895)
chr7 (250-303)||(34899673-34899726)
chr7 (250-305)||(38798753-38798808)
chr7 (250-301)||(42978582-42978633)
chr7 (252-307)||(47590285-47590340)
chr7 (250-300)||(26623859-26623909)
chr7 (261-307)||(37837520-37837566)
chr7 (262-303)||(9450203-9450244)
chr7 (250-307)||(9977268-9977325)
chr7 (250-307)||(24770218-24770275)
[»] chr4 (12 HSPs)
chr4 (25-83)||(9596180-9596238)
chr4 (262-307)||(56156704-56156749)
chr4 (253-301)||(37030254-37030302)
chr4 (250-305)||(19853576-19853631)
chr4 (250-303)||(40066121-40066174)
chr4 (250-302)||(35348297-35348349)
chr4 (250-305)||(22611173-22611228)
chr4 (250-305)||(32766504-32766559)
chr4 (252-294)||(52944300-52944342)
chr4 (250-307)||(21686304-21686360)
chr4 (250-307)||(33921041-33921098)
chr4 (261-305)||(53811029-53811073)
[»] scaffold0445 (1 HSPs)
scaffold0445 (250-307)||(1314-1371)
[»] chr3 (15 HSPs)
chr3 (250-307)||(45568507-45568564)
chr3 (250-307)||(36461493-36461550)
chr3 (250-307)||(38545768-38545825)
chr3 (250-305)||(9998436-9998491)
chr3 (250-305)||(10108205-10108260)
chr3 (250-305)||(10233039-10233094)
chr3 (250-305)||(47042113-47042168)
chr3 (250-304)||(40556681-40556735)
chr3 (262-307)||(43488652-43488697)
chr3 (250-305)||(6954760-6954815)
chr3 (261-307)||(35864994-35865040)
chr3 (261-307)||(36910703-36910749)
chr3 (250-307)||(40487294-40487352)
chr3 (250-294)||(3606742-3606786)
chr3 (261-305)||(10229456-10229500)
[»] chr6 (13 HSPs)
chr6 (250-305)||(23128589-23128644)
chr6 (250-307)||(29319940-29319997)
chr6 (253-308)||(20220852-20220907)
chr6 (253-308)||(22114836-22114891)
chr6 (252-307)||(32327279-32327334)
chr6 (250-305)||(33053232-33053287)
chr6 (250-300)||(13546732-13546782)
chr6 (250-281)||(28981145-28981176)
chr6 (265-307)||(6957136-6957178)
chr6 (250-303)||(606175-606228)
chr6 (250-307)||(3355088-3355145)
chr6 (250-307)||(3913636-3913693)
chr6 (264-304)||(32059894-32059934)
[»] chr5 (10 HSPs)
chr5 (250-307)||(38597766-38597823)
chr5 (250-305)||(35850768-35850823)
chr5 (250-305)||(6012202-6012257)
chr5 (250-300)||(13007198-13007248)
chr5 (261-307)||(24229846-24229892)
chr5 (250-307)||(8096559-8096616)
chr5 (252-308)||(7930148-7930204)
chr5 (263-307)||(11073962-11074006)
chr5 (261-305)||(26825410-26825454)
chr5 (255-303)||(37986179-37986227)
[»] chr2 (12 HSPs)
chr2 (250-307)||(7677936-7677993)
chr2 (262-307)||(43397182-43397227)
chr2 (250-305)||(36943186-36943241)
chr2 (261-307)||(5427931-5427977)
chr2 (252-305)||(7448229-7448282)
chr2 (250-307)||(18763448-18763505)
chr2 (250-305)||(1415537-1415592)
chr2 (250-305)||(7646453-7646508)
chr2 (250-305)||(38445146-38445201)
chr2 (264-307)||(42698764-42698807)
chr2 (250-307)||(31210670-31210727)
chr2 (250-307)||(37876669-37876726)
[»] scaffold0603 (1 HSPs)
scaffold0603 (253-307)||(7689-7743)
[»] scaffold0884 (1 HSPs)
scaffold0884 (250-303)||(2039-2092)
[»] scaffold0017 (1 HSPs)
scaffold0017 (250-307)||(32809-32866)
[»] chr8 (9 HSPs)
chr8 (252-303)||(25191131-25191182)
chr8 (261-307)||(7883301-7883347)
chr8 (250-300)||(20553308-20553358)
chr8 (250-307)||(3673413-3673470)
chr8 (252-305)||(10377663-10377716)
chr8 (250-307)||(23230615-23230672)
chr8 (250-303)||(37971255-37971308)
chr8 (250-307)||(40619133-40619190)
chr8 (250-303)||(45445875-45445928)
[»] scaffold0009 (1 HSPs)
scaffold0009 (250-284)||(58164-58198)
[»] scaffold0136 (1 HSPs)
scaffold0136 (250-307)||(10104-10161)


Alignment Details
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 34479234 - 34479344
Alignment:
Q  22 ccatctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaaactagaaattagtgagaattgtacatgtccagttcatc 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34479234 ccatctcatttatcatgcaatttaaacttcagttttggatgagttccccatttggatgaaaaactagaaattagtgagaattgtacatgtccagttcatc 34479333  T
Q  122 gaggagggacg 132  Q
    |||||||||||    
T  34479334 gaggagggacg 34479344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 34479462 - 34479524
Alignment:
Q  248 cctcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtctgtg 310  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  34479462 cctcgtctgagtatggcgttgtattgttcgtcgtcttatgtggcgtttgatttcgcgtatgtg 34479524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 50377301 - 50377358
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  50377301 tcgtctaagtacggcgttgtgttgttcgtcgttttttgtggcatttgatttcgcgtct 50377358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 21686846 - 21686901
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||||||||||||||||||||||||| || || |||||||||||| ||||    
T  21686846 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 21686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 1742254 - 1742311
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || | |||||||||||||||||    
T  1742254 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtct 1742311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 7836915 - 7836858
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || | |||||||||||||||||    
T  7836915 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgatttcgcgtct 7836858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 10776580 - 10776531
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatt 299  Q
    |||||| ||| ||||||||||||||||||||| ||||| |||||||||||    
T  10776580 tcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgatt 10776531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 34878390 - 34878342
Alignment:
Q  257 agtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    ||||||||||||||||||||||||| || || || ||||||||||||||    
T  34878390 agtacggcgttgtgttgttcgtcgtcttgtgcggtgtttgatttcgcgt 34878342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 14872624 - 14872670
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||| |||||||||||||||| || || |||||||||||||||||||    
T  14872624 cggcattgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 14872670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 34483910 - 34483996
Alignment:
Q  24 atctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaaactagaaattagtgagaattgtacatg 110  Q
    |||||||||||||| |||| |  |||||||||   |||||||||| | ||| | |||||||||| |||||||||  |||||||||||    
T  34483910 atctcatttatcattcaatctcgacttcatttcaagatgagttccgcgtttaggtgaaaaactataaattagtgtaaattgtacatg 34483996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 5983809 - 5983866
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||| ||||||||||||| || || |||||||||||||| ||||    
T  5983809 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgtgtct 5983866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 7337782 - 7337725
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || ||   |||||||||||||||||    
T  7337782 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtct 7337725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 34491896 - 34491968
Alignment:
Q  24 atctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaaactagaaattagt 96  Q
    ||||||||| ||||  ||||| ||||| ||||||||||||||| | ||||| | ||||||| || ||||||||    
T  34491896 atctcatttttcatataatttcaactttatttttggatgagtttctcatttaggtgaaaaattaaaaattagt 34491968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 47132873 - 47132917
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtt 294  Q
    ||||||||||  ||||||||||||||||||||||| || ||||||    
T  47132873 tcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgtt 47132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 3333086 - 3333161
Alignment:
Q  21 tccatctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaaactagaaattagt 96  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||| ||||||||    
T  3333086 tccatctcatttttcatgcaatttcaactttatttttggatgagttcctcatttgagtgaaaaactaaaaattagt 3333161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 45349906 - 45349861
Alignment:
Q  262 ggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  45349906 ggcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtct 45349861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 39328909 - 39328854
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||||||||||||||||||||||||| || || |||||||||||||||||    
T  39328909 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 39328854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 48316931 - 48316874
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  48316931 tcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagcgtttgatttcgcgtct 48316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 30756938 - 30756883
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  30756938 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 30756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 3313984 - 3314053
Alignment:
Q  25 tctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaaactagaaatta 94  Q
    |||||||| | ||||||||| ||||||||||||||| ||||||| ||||  | |||||||||| ||||||    
T  3313984 tctcattttttatgcaatttcaacttcatttttggacgagttcctcattcaggtgaaaaactaaaaatta 3314053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 8001665 - 8001608
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||| ||||||||||||| || || |||||||||||||||||||    
T  8001665 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 8001608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 19296842 - 19296895
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  19296842 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgc 19296895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 34899726 - 34899673
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  34899726 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgc 34899673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 38798753 - 38798808
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| |||||| |||||||||||||||||| || || |||||||||||| ||||    
T  38798753 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 38798808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 42978582 - 42978633
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttc 301  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||    
T  42978582 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttc 42978633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 47590285 - 47590340
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||| ||| ||||||||||||||||||||| || || |||||||||||| ||||||    
T  47590285 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtct 47590340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 26623909 - 26623859
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgattt 300  Q
    |||||||||| ||||||||||||||||||||| || |  ||||||||||||    
T  26623909 tcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtttgattt 26623859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 37837566 - 37837520
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||||||||||||||||| || || |||||||||||| ||||||    
T  37837566 cggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgtct 37837520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 9450244 - 9450203
Alignment:
Q  262 ggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||||||||||||||||| || || |||||||||||||||    
T  9450244 ggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgc 9450203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 9977325 - 9977268
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| | ||||||| ||||||||||| || | ||||||||||||||||||||    
T  9977325 tcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtttgatttcgcgtct 9977268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 24770218 - 24770275
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||| ||||||||||||||||| ||||| | |||||||||||| ||||    
T  24770218 tcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtttgatttcgtgtct 24770275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 9596180 - 9596238
Alignment:
Q  25 tctcatttatcatgcaatttaaacttcatttttggatgagttccccatttggatgaaaa 83  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  9596180 tctcatttttcatgcaatttcaacttcatttttggatgagttcctcttttggatgaaaa 9596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 56156749 - 56156704
Alignment:
Q  262 ggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  56156749 ggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtct 56156704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 37030254 - 37030302
Alignment:
Q  253 tctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttc 301  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||    
T  37030254 tctgagtacggcgttgtgttgttcgtcgtcttgtatggcgtttgatttc 37030302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 19853631 - 19853576
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| ||||||||| |||||||| ||||    
T  19853631 tcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatttgattttgcgt 19853576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 40066174 - 40066121
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  40066174 tcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcagcgtttgatttcgc 40066121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 35348297 - 35348349
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcg 302  Q
    |||||| ||| ||||||||||||||||||||| || || ||||||||||||||    
T  35348297 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcg 35348349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 22611173 - 22611228
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||| ||||    
T  22611173 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattttgcgt 22611228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 32766504 - 32766559
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||| ||||||||||||||||| || || |||||||||||||||||    
T  32766504 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 32766559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 52944300 - 52944342
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtt 294  Q
    |||||||| |||||||||||||||||||||||| || ||||||    
T  52944300 gtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgtt 52944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 21686360 - 21686304
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| |||||| |||||||||||||| || || |||||||||||||||||||    
T  21686360 tcgtctaagtgcggcgt-gtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 21686304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 33921041 - 33921098
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||| ||| ||||| | ||||||||||| |||||    
T  33921041 tcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtttgatttcacgtct 33921098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 53811029 - 53811073
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    ||||||| ||||||||||||| || || |||||||||||||||||    
T  53811029 cggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 53811073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 1314 - 1371
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  1314 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtct 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 45568564 - 45568507
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  45568564 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtct 45568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 36461550 - 36461493
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  36461550 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 36461493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 38545768 - 38545825
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| |||||| |||||||||||||||||| || || |||||||||||||||||||    
T  38545768 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 38545825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 9998436 - 9998491
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  9998436 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 9998491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 10108205 - 10108260
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  10108205 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 10108260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 10233039 - 10233094
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  10233039 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 10233094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 47042168 - 47042113
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| |||||| |||||||||||||||||| || || |||||||||||||||||    
T  47042168 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 47042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 40556681 - 40556735
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcg 304  Q
    |||||| ||| ||||||||||||||||||||| || || ||||||||||||||||    
T  40556681 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcg 40556735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 43488697 - 43488652
Alignment:
Q  262 ggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||||||||||||||||| || || |||||||||||||||||||    
T  43488697 ggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 43488652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 6954815 - 6954760
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||| ||||||||||| || || |||||||||||||||||    
T  6954815 tcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgatttcgcgt 6954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 35865040 - 35864994
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  35865040 cggcgttgtgttgttagtcgtcttgtgtggcgtttgattttgcgtct 35864994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 36910749 - 36910703
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||    
T  36910749 cggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 36910703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 40487294 - 40487352
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcg-tttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || |||| |||||||||||||||    
T  40487294 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgttttgatttcgcgtct 40487352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 3606742 - 3606786
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtt 294  Q
    |||||||||| |||| |||||||||||||||| || |||||||||    
T  3606742 tcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgtt 3606786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 10229456 - 10229500
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    ||||||||||||||||||| | || || |||||||||||||||||    
T  10229456 cggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgcgt 10229500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 23128589 - 23128644
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  23128589 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgt 23128644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 29319997 - 29319940
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  29319997 tcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtttgatttcgcgtct 29319940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 20220852 - 20220907
Alignment:
Q  253 tctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtctg 308  Q
    ||||||| ||||||| ||||||||||||| || || ||||||||||||||||||||    
T  20220852 tctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtctg 20220907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 22114836 - 22114891
Alignment:
Q  253 tctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtctg 308  Q
    ||||||| ||||||| ||||||||||||| || || ||||||||||||||||||||    
T  22114836 tctgagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtctg 22114891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 32327334 - 32327279
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||| ||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  32327334 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 32327279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 33053287 - 33053232
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  33053287 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 33053232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 13546782 - 13546732
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgattt 300  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  13546782 tcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgattt 13546732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 281
Target Start/End: Original strand, 28981145 - 28981176
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgt 281  Q
    ||||||||||||||||||||||||||||||||    
T  28981145 tcgtctgagtacggcgttgtgttgttcgtcgt 28981176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 6957136 - 6957178
Alignment:
Q  265 gttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  6957136 gttgtgttgttcgtcgttttatgtggtgtttcatttcacgtct 6957178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 606175 - 606228
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| ||||||||||||||||||| | || || |||||||||||||||    
T  606175 tcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtttgatttcgc 606228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 3355088 - 3355145
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||| ||||||||||||||| | || |||| |||||||||||||||||    
T  3355088 tcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtct 3355145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 3913693 - 3913636
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || ||   |||||||||||||||||    
T  3913693 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtttgatttcgcgtct 3913636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 32059894 - 32059934
Alignment:
Q  264 cgttgtgttgttcgtcgttttatgtggcgtttgatttcgcg 304  Q
    |||||||||||||||||| || || ||||||||||||||||    
T  32059894 cgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcg 32059934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 38597766 - 38597823
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  38597766 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 38597823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 35850768 - 35850823
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| |||||| |||||||||||||||||| || || |||||||||||||||||    
T  35850768 tcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 35850823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 6012257 - 6012202
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||| ||||||||||||||||| || || |||||||||||||||||    
T  6012257 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 6012202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 13007198 - 13007248
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgattt 300  Q
    |||||| ||| ||||||||||||||||||||| || || ||||||||||||    
T  13007198 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgattt 13007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 24229892 - 24229846
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||||    
T  24229892 cggcgttttgttgttcgtcgtcttgtgtgacgtttgatttcgcgtct 24229846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 8096616 - 8096559
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| |||||||||||||||||| |||||  | ||| |||||||||||||||    
T  8096616 tcgtctaagtgcggcgttgtgttgttcgttgttttgagcggcatttgatttcgcgtct 8096559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 7930148 - 7930204
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtctg 308  Q
    |||| ||| ||||||||||||||||||||| || || | ||||||||||||| ||||    
T  7930148 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgtcgtttgatttcgcatctg 7930204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 11074006 - 11073962
Alignment:
Q  263 gcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||| ||||||||||| || || |||||||||||||||||||    
T  11074006 gcgttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 11073962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 26825410 - 26825454
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    ||||||||||||||||||| | || || |||||||||||||||||    
T  26825410 cggcgttgtgttgttcgtcttcttgtgcggcgtttgatttcgcgt 26825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 37986227 - 37986179
Alignment:
Q  255 tgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    ||||| |||||||||||||||| |||| || || |||||||||||||||    
T  37986227 tgagtgcggcgttgtgttgttcatcgtcttgtgcggcgtttgatttcgc 37986179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 7677993 - 7677936
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  7677993 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 7677936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 43397227 - 43397182
Alignment:
Q  262 ggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  43397227 ggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtct 43397182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 36943241 - 36943186
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  36943241 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 36943186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 5427977 - 5427931
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  5427977 cggcgttttgttgttcgtcgtcttgtgtggcgtttgatttcgcgtct 5427931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 7448229 - 7448282
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||| ||| ||||||||||||||||||||| || || |||||||||||||||||    
T  7448229 gtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 7448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 18763448 - 18763505
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||| ||||||||||||||||| || || |||||||||||||||||||    
T  18763448 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 18763505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 1415537 - 1415592
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| |||||| ||||||||||||| |||| || || |||||||||||||||||    
T  1415537 tcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtttgatttcgcgt 1415592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 7646453 - 7646508
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| ||||||| ||||||||||||| || || |||||||||||||||||    
T  7646453 tcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 7646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 38445146 - 38445201
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||||| ||| | ||||||||||||||||||| || || |||||||||||||||||    
T  38445146 tcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgt 38445201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 42698807 - 42698764
Alignment:
Q  264 cgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||||||||||||||| || ||||||||||||||| ||||||    
T  42698807 cgttgtgttgttcgtcgtcttgtgtggcgtttgattttgcgtct 42698764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 31210727 - 31210670
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||| || || || || |||||||||||||||||||    
T  31210727 tcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtttgatttcgcgtct 31210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 37876726 - 37876669
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||| ||||||||||||| || || ||| |||||||||||||||    
T  37876726 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatttgatttcgcgtct 37876669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 7689 - 7743
Alignment:
Q  253 tctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||| ||||||||||||||| ||||| || |||||||||||| |||||||||    
T  7689 tctgagtgcggcgttgtgttgtttgtcgtcttgtgtggcgtttgaattcgcgtct 7743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 2092 - 2039
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| |||| || ||||||||||||| |||||||||||||||||||||    
T  2092 tcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtttgatttcgc 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 32866 - 32809
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||| ||||||||||||| || || |||||||||||||||||||    
T  32866 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 32809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 25191182 - 25191131
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||| ||||| ||||||||||||||||||| || || |||||||||||||||    
T  25191182 gtctaagtacagcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgc 25191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 7883347 - 7883301
Alignment:
Q  261 cggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||    
T  7883347 cggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcacgtct 7883301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 20553358 - 20553308
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgattt 300  Q
    |||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  20553358 tcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtttgattt 20553308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 3673413 - 3673470
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||| ||||||||||||||||| ||||| || ||||||||||| ||||    
T  3673413 tcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtttgatttcgtgtct 3673470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 10377663 - 10377716
Alignment:
Q  252 gtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgt 305  Q
    |||| ||| ||||||||||||||||| ||| || || |||||||||||||||||    
T  10377663 gtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgatttcgcgt 10377716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 23230615 - 23230672
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||| | ||||||||||||| || || |||||||||||||||||||    
T  23230615 tcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 23230672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 37971255 - 37971308
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| ||| ||||||| ||||||||||||| || || |||||||||||||||    
T  37971255 tcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgatttcgc 37971308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 40619190 - 40619133
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| ||||||||||||||| ||||| || |||| |||||||||||| ||||    
T  40619190 tcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtgacgtttgatttcgtgtct 40619133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 45445928 - 45445875
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgc 303  Q
    |||||| |||||| |||||| ||||||||||| || || |||||||||||||||    
T  45445928 tcgtctaagtacgacgttgtattgttcgtcgtcttgtgcggcgtttgatttcgc 45445875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 58198 - 58164
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgtttt 284  Q
    |||||||||| ||||||||||||||||||||||||    
T  58198 tcgtctgagtgcggcgttgtgttgttcgtcgtttt 58164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 10161 - 10104
Alignment:
Q  250 tcgtctgagtacggcgttgtgttgttcgtcgttttatgtggcgtttgatttcgcgtct 307  Q
    |||||| ||| |||| |||| ||||||||||| || || |||||||||||||||||||    
T  10161 tcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtttgatttcgcgtct 10104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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