View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16630_low_32 (Length: 289)

Name: NF16630_low_32
Description: NF16630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16630_low_32
NF16630_low_32
[»] chr5 (33 HSPs)
chr5 (10-252)||(11181774-11182018)
chr5 (18-252)||(19588657-19588893)
chr5 (18-252)||(3880211-3880446)
chr5 (18-252)||(42127361-42127596)
chr5 (59-252)||(24553499-24553692)
chr5 (19-252)||(17003911-17004145)
chr5 (18-240)||(28832182-28832403)
chr5 (19-252)||(12084127-12084362)
chr5 (19-252)||(14520140-14520375)
chr5 (18-252)||(11916922-11917158)
chr5 (19-252)||(31300547-31300782)
chr5 (18-241)||(33030891-33031117)
chr5 (18-230)||(6741784-6741998)
chr5 (18-191)||(10281722-10281898)
chr5 (19-234)||(15464460-15464678)
chr5 (19-234)||(9353284-9353500)
chr5 (19-234)||(36932301-36932518)
chr5 (25-233)||(7160861-7161068)
chr5 (55-241)||(2630153-2630341)
chr5 (126-227)||(28278450-28278553)
chr5 (159-227)||(38747173-38747241)
chr5 (19-124)||(38192214-38192319)
chr5 (19-124)||(38219439-38219544)
chr5 (18-92)||(33831694-33831768)
chr5 (98-151)||(15552461-15552515)
chr5 (98-151)||(31179380-31179434)
chr5 (98-151)||(31542950-31543004)
chr5 (98-151)||(31545296-31545350)
chr5 (17-87)||(8566031-8566101)
chr5 (59-92)||(40147316-40147349)
chr5 (59-92)||(42926922-42926955)
chr5 (56-92)||(5887496-5887532)
chr5 (79-240)||(28537549-28537712)
[»] chr7 (39 HSPs)
chr7 (18-252)||(29159714-29159950)
chr7 (18-252)||(20284000-20284235)
chr7 (18-252)||(46516260-46516496)
chr7 (18-252)||(2647646-2647882)
chr7 (18-252)||(33332400-33332636)
chr7 (18-252)||(4796617-4796853)
chr7 (18-252)||(23402964-23403199)
chr7 (18-252)||(55859-56094)
chr7 (18-252)||(9189958-9190194)
chr7 (18-234)||(5817221-5817438)
chr7 (10-252)||(35960727-35960971)
chr7 (20-252)||(49091573-49091806)
chr7 (18-252)||(2580298-2580536)
chr7 (18-227)||(28617176-28617386)
chr7 (18-233)||(3047186-3047401)
chr7 (18-248)||(21983198-21983432)
chr7 (81-252)||(9185178-9185349)
chr7 (21-234)||(2479266-2479479)
chr7 (159-252)||(9235648-9235741)
chr7 (66-248)||(21988822-21989006)
chr7 (19-234)||(44848636-44848852)
chr7 (87-234)||(47263607-47263754)
chr7 (126-218)||(22270107-22270201)
chr7 (19-234)||(18413570-18413785)
chr7 (18-81)||(9235533-9235596)
chr7 (19-142)||(21646028-21646152)
chr7 (17-83)||(24525985-24526052)
chr7 (130-192)||(30814574-30814637)
chr7 (17-92)||(2361052-2361127)
chr7 (19-124)||(21639849-21639954)
chr7 (17-92)||(29608750-29608825)
chr7 (98-151)||(31155920-31155974)
chr7 (17-92)||(38671302-38671377)
chr7 (17-92)||(48599414-48599489)
chr7 (59-92)||(8153397-8153430)
chr7 (18-92)||(23565141-23565216)
chr7 (56-92)||(3259047-3259083)
chr7 (18-85)||(4538627-4538694)
chr7 (56-88)||(25615905-25615937)
[»] chr6 (28 HSPs)
chr6 (18-252)||(10077115-10077351)
chr6 (18-252)||(4629864-4630101)
chr6 (18-252)||(31979424-31979660)
chr6 (58-252)||(22963611-22963806)
chr6 (58-252)||(23824587-23824782)
chr6 (18-252)||(18232756-18232992)
chr6 (18-241)||(24435921-24436143)
chr6 (18-207)||(5572191-5572382)
chr6 (18-252)||(5017430-5017654)
chr6 (18-248)||(21801294-21801531)
chr6 (18-196)||(31086423-31086603)
chr6 (81-252)||(31936498-31936671)
chr6 (19-234)||(5757430-5757646)
chr6 (18-241)||(31076892-31077116)
chr6 (19-234)||(21355965-21356182)
chr6 (18-150)||(14521688-14521819)
chr6 (81-211)||(27165635-27165767)
chr6 (81-252)||(22708930-22709102)
chr6 (18-123)||(1115055-1115159)
chr6 (207-252)||(5572737-5572782)
chr6 (17-92)||(2973019-2973094)
chr6 (17-92)||(5043640-5043715)
chr6 (98-151)||(12195524-12195578)
chr6 (17-76)||(16569046-16569106)
chr6 (17-87)||(17763003-17763073)
chr6 (98-151)||(26065233-26065286)
chr6 (98-151)||(26085202-26085255)
chr6 (17-86)||(28137494-28137563)
[»] chr3 (58 HSPs)
chr3 (18-252)||(40844563-40844798)
chr3 (18-254)||(18552823-18553061)
chr3 (18-252)||(3328297-3328532)
chr3 (18-252)||(40592722-40592959)
chr3 (18-240)||(37466214-37466437)
chr3 (18-252)||(3715942-3716178)
chr3 (18-252)||(26298899-26299135)
chr3 (18-252)||(48438125-48438361)
chr3 (18-252)||(24695104-24695339)
chr3 (19-252)||(8370428-8370663)
chr3 (18-241)||(1417431-1417655)
chr3 (18-221)||(1736245-1736450)
chr3 (19-232)||(21711154-21711368)
chr3 (18-241)||(25795702-25795928)
chr3 (70-252)||(25929435-25929618)
chr3 (21-252)||(30709733-30709967)
chr3 (19-252)||(6794654-6794889)
chr3 (18-232)||(4386868-4387084)
chr3 (18-196)||(36029060-36029240)
chr3 (19-239)||(16264273-16264495)
chr3 (19-252)||(35925393-35925625)
chr3 (19-234)||(27974893-27975110)
chr3 (18-176)||(47923845-47924006)
chr3 (20-143)||(3323633-3323756)
chr3 (81-234)||(27986449-27986604)
chr3 (81-234)||(33386669-33386825)
chr3 (81-234)||(39039995-39040151)
chr3 (19-234)||(32143250-32143467)
chr3 (18-111)||(8126684-8126777)
chr3 (18-123)||(21353604-21353708)
chr3 (126-227)||(34491346-34491449)
chr3 (182-252)||(8126612-8126682)
chr3 (19-233)||(26928541-26928757)
chr3 (66-207)||(27452914-27453056)
chr3 (182-252)||(27026856-27026925)
chr3 (70-110)||(25929365-25929405)
chr3 (182-252)||(27038201-27038270)
chr3 (56-92)||(32744516-32744552)
chr3 (18-78)||(47649656-47649716)
chr3 (17-92)||(760860-760935)
chr3 (66-234)||(1305878-1306046)
chr3 (198-252)||(1417176-1417230)
chr3 (17-92)||(22835082-22835157)
chr3 (17-92)||(32891116-32891192)
chr3 (17-92)||(39153441-39153516)
chr3 (25-151)||(29100172-29100299)
chr3 (98-151)||(746953-747007)
chr3 (55-105)||(5366301-5366351)
chr3 (98-151)||(6063453-6063507)
chr3 (17-92)||(46860487-46860562)
chr3 (98-151)||(50494195-50494249)
chr3 (59-92)||(4570007-4570040)
chr3 (17-87)||(34491225-34491295)
chr3 (211-252)||(47924007-47924048)
chr3 (59-92)||(51398869-51398902)
chr3 (59-88)||(53921587-53921616)
chr3 (19-92)||(9581297-9581370)
chr3 (56-92)||(23391989-23392025)
[»] chr1 (47 HSPs)
chr1 (16-252)||(47098773-47099010)
chr1 (18-248)||(19072842-19073075)
chr1 (18-248)||(19120732-19120965)
chr1 (18-252)||(16124466-16124703)
chr1 (18-252)||(13598309-13598545)
chr1 (18-252)||(29651722-29651958)
chr1 (18-252)||(47703886-47704122)
chr1 (58-252)||(27104362-27104558)
chr1 (26-252)||(47102800-47103027)
chr1 (18-252)||(9476173-9476408)
chr1 (80-252)||(775583-775757)
chr1 (18-252)||(32889349-32889586)
chr1 (19-234)||(26644849-26645066)
chr1 (18-234)||(17345470-17345687)
chr1 (19-233)||(3281637-3281853)
chr1 (18-175)||(22819416-22819575)
chr1 (22-251)||(9023794-9024017)
chr1 (19-232)||(37069700-37069912)
chr1 (23-232)||(21536525-21536736)
chr1 (19-230)||(13604574-13604788)
chr1 (131-234)||(50521165-50521271)
chr1 (178-252)||(40816844-40816918)
chr1 (19-98)||(40816765-40816844)
chr1 (17-92)||(8550867-8550942)
chr1 (98-151)||(47179929-47179982)
chr1 (19-124)||(19358794-19358899)
chr1 (66-234)||(19361431-19361600)
chr1 (66-234)||(19380071-19380240)
chr1 (19-124)||(24202720-24202825)
chr1 (98-151)||(47177578-47177631)
chr1 (58-119)||(48382471-48382532)
chr1 (46-154)||(35109515-35109623)
chr1 (56-92)||(40122278-40122314)
chr1 (98-151)||(9459428-9459482)
chr1 (98-151)||(9463255-9463309)
chr1 (98-151)||(16226383-16226437)
chr1 (98-151)||(16231779-16231833)
chr1 (59-92)||(193666-193699)
chr1 (98-154)||(2617732-2617789)
chr1 (59-92)||(10925278-10925311)
chr1 (122-151)||(13137985-13138014)
chr1 (18-154)||(32736947-32737083)
chr1 (59-92)||(42298055-42298088)
chr1 (59-92)||(50169290-50169323)
chr1 (56-92)||(196988-197024)
chr1 (56-92)||(834247-834283)
chr1 (107-151)||(17319113-17319157)
[»] chr4 (51 HSPs)
chr4 (18-239)||(10047303-10047526)
chr4 (18-241)||(6743366-6743590)
chr4 (18-252)||(54867095-54867330)
chr4 (65-252)||(39245905-39246094)
chr4 (18-239)||(42599523-42599747)
chr4 (18-253)||(38152389-38152625)
chr4 (18-252)||(25861983-25862208)
chr4 (18-248)||(3796469-3796702)
chr4 (19-218)||(36315181-36315381)
chr4 (19-218)||(36329390-36329590)
chr4 (18-252)||(24333723-24333957)
chr4 (18-250)||(5147590-5147824)
chr4 (8-175)||(39774245-39774414)
chr4 (67-251)||(34495822-34496007)
chr4 (18-252)||(3777461-3777695)
chr4 (18-252)||(5143170-5143406)
chr4 (20-239)||(5269154-5269364)
chr4 (10-175)||(18377348-18377514)
chr4 (19-234)||(5396623-5396840)
chr4 (18-196)||(16623243-16623424)
chr4 (31-252)||(16630643-16630866)
chr4 (18-175)||(5112226-5112383)
chr4 (19-234)||(31985585-31985801)
chr4 (16-241)||(1983249-1983473)
chr4 (81-229)||(8689498-8689647)
chr4 (17-92)||(31474163-31474239)
chr4 (18-110)||(37781917-37782008)
chr4 (81-234)||(28468542-28468696)
chr4 (98-151)||(18709173-18709227)
chr4 (98-151)||(18847423-18847476)
chr4 (98-151)||(22134627-22134680)
chr4 (201-252)||(16624144-16624195)
chr4 (179-218)||(21688436-21688475)
chr4 (17-92)||(379393-379468)
chr4 (17-92)||(8665421-8665496)
chr4 (17-92)||(12073405-12073480)
chr4 (98-151)||(16931798-16931852)
chr4 (98-151)||(16934152-16934206)
chr4 (98-151)||(22780382-22780436)
chr4 (98-151)||(22782747-22782801)
chr4 (98-151)||(44599847-44599901)
chr4 (17-92)||(52467434-52467509)
chr4 (18-92)||(5871834-5871908)
chr4 (59-92)||(6656011-6656044)
chr4 (59-92)||(24969167-24969200)
chr4 (59-92)||(26364291-26364324)
chr4 (59-92)||(35662496-35662529)
chr4 (17-87)||(45687267-45687338)
chr4 (59-92)||(46147471-46147504)
chr4 (59-92)||(48893718-48893751)
chr4 (59-92)||(50673927-50673960)
[»] chr2 (43 HSPs)
chr2 (18-252)||(31055953-31056191)
chr2 (18-252)||(33118047-33118283)
chr2 (18-252)||(10445394-10445630)
chr2 (18-239)||(20522144-20522367)
chr2 (18-252)||(39482842-39483078)
chr2 (18-252)||(33528576-33528807)
chr2 (18-252)||(17865114-17865350)
chr2 (18-252)||(34682284-34682520)
chr2 (18-252)||(8039971-8040209)
chr2 (18-247)||(2869643-2869875)
chr2 (18-252)||(21629860-21630090)
chr2 (18-248)||(8390100-8390331)
chr2 (18-248)||(14698958-14699176)
chr2 (23-239)||(13569253-13569470)
chr2 (52-252)||(16940193-16940395)
chr2 (52-252)||(17010858-17011060)
chr2 (21-239)||(10707205-10707424)
chr2 (10-251)||(40014839-40015080)
chr2 (18-252)||(34388770-34388997)
chr2 (19-252)||(23078422-23078657)
chr2 (19-234)||(28259129-28259345)
chr2 (18-236)||(42039619-42039840)
chr2 (62-151)||(2838024-2838114)
chr2 (18-175)||(15903841-15903997)
chr2 (19-234)||(36757714-36757931)
chr2 (54-241)||(35397433-35397622)
chr2 (61-175)||(1345533-1345652)
chr2 (36-175)||(27149263-27149402)
chr2 (81-234)||(40738773-40738926)
chr2 (19-142)||(25398517-25398641)
chr2 (19-142)||(25403655-25403779)
chr2 (19-124)||(3491791-3491896)
chr2 (17-92)||(11151671-11151746)
chr2 (17-92)||(11690514-11690589)
chr2 (19-124)||(25407663-25407768)
chr2 (17-92)||(42362365-42362440)
chr2 (98-151)||(35215595-35215649)
chr2 (98-151)||(35217972-35218026)
chr2 (22-92)||(723824-723894)
chr2 (18-92)||(14633906-14633980)
chr2 (18-75)||(28770725-28770781)
chr2 (59-92)||(36773617-36773650)
chr2 (98-151)||(42452973-42453026)
[»] scaffold0148 (1 HSPs)
scaffold0148 (26-252)||(10640-10868)
[»] scaffold0006 (3 HSPs)
scaffold0006 (18-252)||(5594-5830)
scaffold0006 (18-252)||(2403-2639)
scaffold0006 (19-230)||(133231-133445)
[»] chr8 (34 HSPs)
chr8 (18-252)||(26403180-26403416)
chr8 (18-252)||(23799527-23799763)
chr8 (18-252)||(19752344-19752580)
chr8 (18-241)||(6127142-6127368)
chr8 (18-252)||(5702433-5702669)
chr8 (18-252)||(4696557-4696782)
chr8 (18-234)||(6813611-6813830)
chr8 (98-252)||(9765849-9766006)
chr8 (19-234)||(4455956-4456173)
chr8 (18-224)||(9054788-9054995)
chr8 (19-234)||(7412269-7412486)
chr8 (19-241)||(28307484-28307707)
chr8 (18-185)||(3051097-3051266)
chr8 (66-234)||(19175753-19175923)
chr8 (19-234)||(31071180-31071398)
chr8 (46-247)||(5990539-5990742)
chr8 (17-92)||(30291619-30291695)
chr8 (24-107)||(7493130-7493212)
chr8 (9-92)||(4162502-4162585)
chr8 (66-142)||(1261953-1262029)
chr8 (16-92)||(18141833-18141908)
chr8 (17-92)||(1292543-1292618)
chr8 (17-92)||(3303750-3303825)
chr8 (56-86)||(3772244-3772274)
chr8 (98-151)||(43079874-43079928)
chr8 (98-151)||(43082245-43082299)
chr8 (59-92)||(10015136-10015169)
chr8 (59-92)||(11384040-11384073)
chr8 (98-151)||(28283230-28283283)
chr8 (17-86)||(6598985-6599054)
chr8 (17-86)||(6674438-6674507)
chr8 (59-87)||(18106163-18106191)
chr8 (17-82)||(40328792-40328857)
chr8 (56-92)||(41364927-41364963)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-252)||(17174-17410)
scaffold0176 (59-92)||(18083-18116)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-253)||(85594-85829)
[»] scaffold0087 (2 HSPs)
scaffold0087 (19-234)||(43913-44129)
scaffold0087 (19-233)||(36784-37000)
[»] scaffold0140 (1 HSPs)
scaffold0140 (25-234)||(8376-8588)
[»] scaffold0078 (2 HSPs)
scaffold0078 (15-237)||(23455-23681)
scaffold0078 (81-144)||(43274-43338)
[»] scaffold0098 (1 HSPs)
scaffold0098 (89-234)||(45182-45329)
[»] scaffold0184 (1 HSPs)
scaffold0184 (81-144)||(29506-29570)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-90)||(102445-102516)
[»] scaffold0267 (1 HSPs)
scaffold0267 (98-151)||(266-320)
[»] scaffold0188 (2 HSPs)
scaffold0188 (66-124)||(17951-18008)
scaffold0188 (66-124)||(24044-24101)
[»] scaffold0472 (1 HSPs)
scaffold0472 (98-154)||(6424-6481)
[»] scaffold0286 (1 HSPs)
scaffold0286 (59-92)||(11612-11645)
[»] scaffold0219 (1 HSPs)
scaffold0219 (59-92)||(27523-27556)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 11181774 - 11182018
Alignment:
Q  10 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 109  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11181774 gtgacatgaaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 11181873  T
Q  110 ggactgctctctccc--tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 207  Q
    ||  |||||||||||  |||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11181874 gggttgctctctccccctagagtaggtcatattagaccgaactaggttaccatcttggtgtgtttgttcatttctttcattgcttatctttattgctttg 11181973  T
Q  208 attatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||| || |||||||||||||||||||  |||||||||    
T  11181974 attatgcttgtggtattgctctacacttagatttaagtctgtttt 11182018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 19588893 - 19588657
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||| ||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  19588893 aaaaagggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 19588794  T
Q  118 ctctcccta-gagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||||| || ||| |||||||||||||||||| || | || |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19588793 ctctccctaagattagttcatattggaccgaactgggtcaacaatctttgagtgtttgttcctttctttcattgcttatctttattgctttgattatgct 19588694  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||| ||||    
T  19588693 tgtggtgttgctctacacttagatttaggtctttttt 19588657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 3880446 - 3880211
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  3880446 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 3880347  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| ||||||||||||||| ||||||| | | || |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3880346 ctctgcctcagattaggtcatattggacagaactgaatcaacaatcttggtgtgtt-gttcctttctttcattgcttatctttattgctttgattatgct 3880248  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||| ||||||||||||| ||||||||||    
T  3880247 tgtggtgttgctttacacttagatttaggtctgtttt 3880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 42127361 - 42127596
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| | |||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||    
T  42127361 aaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgct 42127459  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||| || ||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  42127460 ctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgct 42127559  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||| ||||||||  |||||||||    
T  42127560 tgtggtgttgctctacaattagatttaagtctgtttt 42127596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 252
Target Start/End: Original strand, 24553499 - 24553692
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc-tagagtaggtcatattggaccgaactgagttac 157  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||  | |     
T  24553499 aagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggagg-ctgctctctcccatagattaggtcatattggaccgaactggatcaa 24553596  T
Q  158 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  24553597 caatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttgtggtgtttctctacacttagatttaggtctgtttt 24553692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 17003911 - 17004145
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  ||||| |||| |||||| ||||||||| |||| |  ||||||||| |||||||||| ||  ||||||    
T  17003911 aaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctc 17004010  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  17004011 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatcttttttgctttgattatgctt 17004110  T
Q  217 gtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || |||||||| ||||||||||||| ||||||||||    
T  17004111 gtggtgttgct-tacacttagatttaggtctgtttt 17004145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 28832403 - 28832182
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||  ||||||||||||    ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  28832403 aaaatgggtagaaattagaacttgttcttttgta--cttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgct 28832307  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||| | || | || ||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||    
T  28832306 ctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgtttgtttgtttctttcattgcttatctttattgatttgattatgct 28832207  T
Q  216 tgtagtgttgctctacacttagatt 240  Q
    ||| |||||||||||||||||||||    
T  28832206 tgtggtgttgctctacacttagatt 28832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 12084127 - 12084362
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacc---atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| | | ||||||||| |||||||||||| || | |   || ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  12084226 tctgccccatattaggtcatagtggaccgaactgggtcaacaatattttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgc 12084324  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  12084325 ttgtggtgttgctctacacttagatctaggtctgtttt 12084362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 14520375 - 14520140
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||| ||  ||||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  119 t-ctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    | | ||||||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||| ||||||||| |  ||||||| ||||||    
T  14520276 tcccccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcagtgcttatct-ttgtgctttgtttatgc 14520178  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  14520177 ttgtggtgttgctctacacttagatctaggtctgtttt 14520140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 11916922 - 11917158
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  |||||  || ||| ||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| | | |||||||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||||||| ||||||  || |||||||    
T  11917022 ctctcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctctcattgcttatctttattgcactgtttatgct 11917121  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||||| |||| | ||||| ||||    
T  11917122 tgtggtgttgctctacactaagatctaggtctttttt 11917158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 31300547 - 31300782
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||| ||||||||| ||  |||||  || |||  ||||||| |||||| || || ||||||||||||||||||||||||   | ||    
T  31300547 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttttcttgcaactca-ttataacactttcatcttagtggattggagagtttct 31300645  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||| ||| |||||||||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||  ||    
T  31300646 ctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttttgattacact 31300745  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  31300746 tgtggtgttgctctacacttagatttaggtctgtttt 31300782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 33030891 - 33031117
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| || ||||||||| | |||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||||||  |||||    
T  33030891 aaaatgggtagaaattatgttttgttcttt-gtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgct 33030989  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| |||||| |||||||| ||||||||||| || || ||| ||| |||||||||||||||  |||||||| |||||| |||||||||||||||     
T  33030990 ctctcccccagagtatgtcatatttgaccgaactgaattaacaatctttgatgtgtttgttcctttattttcattggttatctttattgctttgattatt 33031089  T
Q  214 cttgtagtgttgctctacacttagattt 241  Q
    || || || |||||||||||||||||||    
T  33031090 ctcgtggtattgctctacacttagattt 33031117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 6741998 - 6741784
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| ||||||| ||||||||| | ||| ||  |||||||||||||||||||  |||||||||||| ||||||| ||||||||||  |||||    
T  6741998 aaaatgagtagaaattaggttttgttcttt-gtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgct 6741900  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    || | ||| |||||| ||||||||| ||||||||| ||| |  ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6741899 ctatcccccagagtatgtcatattgaaccgaactgtgttaataatctttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgc 6741800  T
Q  215 ttgtagtgttgctcta 230  Q
    |||| |||||| ||||    
T  6741799 ttgtggtgttgttcta 6741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 10281898 - 10281722
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  10281898 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 10281799  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgct 191  Q
    |||| ||| |||  ||||||||||||||||||||| ||  || ||| |||||||||||||||||||||||| |||||    
T  10281798 ctctcccccagatcaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttctttgct 10281722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 15464678 - 15464460
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  15464678 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 15464580  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| ||| ||| |||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| ||||| |||| ||||     
T  15464579 ctctcccccagattagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttattgttttggttata 15464481  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  15464480 cttgtggtgttgctctacact 15464460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 9353284 - 9353500
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||| |||||||||| ||  |||||  |||||  ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  9353284 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 9353382  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || |||||  |||||    
T  9353383 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtatatgc 9353480  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  9353481 ttgtggtgttgctctacact 9353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 36932301 - 36932518
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||| ||||||||||| ||  | |||  ||||||  ||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  36932301 aaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 36932399  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||| ||||||||||||||| | || ||||| |||||    
T  36932400 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttccttt-tttcattgcttatctttgtt-ctttgtttatg 36932497  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  36932498 cttgtggtgttgctctacact 36932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 7160861 - 7161068
Alignment:
Q  25 gtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-cc 123  Q
    ||||| |||| |||||||||||| | ||||||| || ||||||| ||||||| | |||||||||||||||||| ||||||||||||  ||| ||||| ||    
T  7160861 gtagaaattaagtcttgttcttt-gtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctctccc 7160959  T
Q  124 ctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgtagtg 222  Q
    ||| |||||||||||||| | | |||||  ||||||| |||||||||||| || ||||||| | || ||||| | | ||||||||||||||| ||| |||    
T  7160960 ctatagtaggtcatattgaatcaaactggattaccattttggtgtgtttgttttctttcttgc-tttcttat-tttgttgctttgattatgcctgtggtg 7161057  T
Q  223 ttgctctacac 233  Q
    ||||| |||||    
T  7161058 ttgctttacac 7161068  T

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Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 241
Target Start/End: Complemental strand, 2630341 - 2630153
Alignment:
Q  55 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgag 153  Q
    |||||||||||||| ||||||| | ||||||||||||||||| |||||||||| ||  ||||| ||||||| | || ||||||||||||||||||||  |    
T  2630341 ttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaagcaggtcatattggaccgaactagg 2630242  T
Q  154 tt-accatcttggtgtgtttgttcctttct-ttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagattt 241  Q
    || || || ||| || |||||||   |||| ||| || ||||||| ||||||||| | ||||||||| |||||||||| |||||||||||    
T  2630241 ttaacaatattgatgcgtttgttttattctcttcctt-cttatctctattgctttaaatatgcttgtggtgttgctctgcacttagattt 2630153  T

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Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 28278450 - 28278553
Alignment:
Q  126 agagtaggtcatattggaccgaactgagttacca--tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 223  Q
    |||||||||||  ||||||||||||| || | ||  ||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||| || |    
T  28278450 agagtaggtcaagttggaccgaactgggtgaacaattcttggtgtgtttctttctttctttcattgcttatctttattgctttgattatgattgtggttt 28278549  T
Q  224 tgct 227  Q
    ||||    
T  28278550 tgct 28278553  T

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Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 38747173 - 38747241
Alignment:
Q  159 atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 227  Q
    |||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||| || |||||    
T  38747173 atcttggtggatttgttcctttctttaattgcttatctttattgctttgattatgattgtggttttgct 38747241  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 38192319 - 38192214
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  38192319 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 38192221  T
Q  118 ctctccc 124  Q
    |||||||    
T  38192220 ctctccc 38192214  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 38219544 - 38219439
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  38219544 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 38219446  T
Q  118 ctctccc 124  Q
    |||||||    
T  38219445 ctctccc 38219439  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 33831694 - 33831768
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  33831694 aaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 15552461 - 15552515
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  15552461 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 15552515  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 31179434 - 31179380
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31179434 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 31542950 - 31543004
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31542950 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31543004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 31545296 - 31545350
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31545296 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31545350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 8566101 - 8566031
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatc 87  Q
    |||||||||||||  |||||| ||||||||| | ||||||  |||||||||||||||||||| ||||||||||    
T  8566101 gaaaatgggtagaacttaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 40147316 - 40147349
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  40147316 aagctaatttcttgtaactcatttgtatctcttt 40147349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 42926922 - 42926955
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  42926922 aagctaatttcttgtaactcatttgtatctcttt 42926955  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 5887532 - 5887496
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  5887532 tttaagctaatttcttgcaacccatttgtatcacttt 5887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 240
Target Start/End: Complemental strand, 28537712 - 28537549
Alignment:
Q  79 atttgtatcactttcatcttagtggattggaggactgctctctc-cctagagtaggtcatattggaccgaactgagtta-ccatcttggtgtgtttgttc 176  Q
    |||| ||||||||| |||||||||||||||||  |||||||||| | || || ||||  ||||||| |||  ||||||| | |||||||| ||||||||     
T  28537712 atttatatcacttttatcttagtggattggagagctgctctctctcttataggaggttctattggatcgagttgagttatcaatcttggtctgtttgttt 28537613  T
Q  177 ctttctttcattgcttatctatattg-ctttgattatgcttgtagtgttgctctacacttagatt 240  Q
    | ||||| | || ||||||| | |||  |||||||||| |||| ||| || | ||||||||||||    
T  28537612 cattcttgc-tttcttatctttgttgattttgattatgtttgtggtgctgttttacacttagatt 28537549  T

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Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 29159950 - 29159714
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  29159950 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 29159851  T
Q  118 ctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||| |||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  29159850 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 29159751  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  29159750 tgtggtgttgctctacacttagatttaggtctgtttt 29159714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 20284235 - 20284000
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||| ||||||| |||||| ||||||||||||  ||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||    
T  20284235 aaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcatt-gtaacactttcatcttagtggattggagggctgct 20284137  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20284136 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatgct 20284037  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  20284036 tgtggtgttgctctacacttagatttaggtctgtttt 20284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 46516260 - 46516496
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||||||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  46516360 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgct 46516459  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    | | |||||||| |||||||||||||  |||||||||    
T  46516460 tttggtgttgctttacacttagatttaagtctgtttt 46516496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 2647646 - 2647882
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  2647646 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 2647745  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||||| ||||| || || | || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2647746 ctctcccccagaataggtcatattgggccgaattgggtcaacaatcttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 2647845  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||| |||||||||| ||||||||||    
T  2647846 tgtggtgttgctctaaacttagatttaggtctgtttt 2647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 33332400 - 33332636
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  33332400 aaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgct 33332499  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| ||||||||||| || ||||||| ||  || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33332500 ctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgatttgattatgct 33332599  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    | | |||||||||||||||||||||| ||| ||||||    
T  33332600 tatggtgttgctctacacttagatttaggtttgtttt 33332636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 4796617 - 4796853
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||| | || ||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| ||||||||| |||| |||||    
T  4796617 aaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgct 4796716  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
     ||||||  ||| |||||||| ||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  4796717 ttctcccccagattaggtcattttggaccgaactgggttaacaatcttggtgtgtttgttcctttctctcattgcttatctttattgctttgattatgct 4796816  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  4796817 tgtggtgttgctctacacttagatttaggtctgtttt 4796853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 23402964 - 23403199
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  23402964 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggctgct 23403062  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    | |||||| ||| ||||||||||| ||||||| || || | || |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23403063 cactccctcagattaggtcatattagaccgaattgggtcaacaatcttagtgtgtttgttcctttctttcattgcttatatttattgctttgattatgct 23403162  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||||||| |||| ||||||||||    
T  23403163 tgtggtgttgctctacacttacatttaggtctgtttt 23403199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 56094 - 55859
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  56094 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 55995  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||| ||| |||||||||||||||||||||| ||  |  |||||||||||||||||||||| ||| |||||||||||| |  |||||||||||||||    
T  55994 ctctccccagattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctttccttccattgcttatct-ttgtgctttgattatgct 55896  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||| |||||||| | ||||||||||    
T  55895 tgtggtgttgctctatacttagatctaggtctgtttt 55859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 9189958 - 9190194
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  9189958 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 9190056  T
Q  117 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  9190057 tctctcccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgtttatgc 9190156  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||| | ||| ||||||    
T  9190157 ttgtggtgttgctctacacttagatctaggtttgtttt 9190194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 5817221 - 5817438
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||| |||| ||||||| ||||||||| | ||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||  |||||    
T  5817221 aaaatggatagaaattaggttttgttcttt-gtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgct 5817319  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||||  |||||  |||||||||||    
T  5817320 ctctccccagagtaggtcatattggaccgaactgagttaacaatctttggtgtgtttgttcctttcttacattgcttatcattattgtgttgattatgct 5817419  T
Q  216 tgtagtgttgctctacact 234  Q
    ||| |||||| ||||||||    
T  5817420 tgtggtgttgttctacact 5817438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 10 - 252
Target Start/End: Complemental strand, 35960971 - 35960727
Alignment:
Q  10 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 109  Q
    |||| ||||||||||||||| ||||||| |||||||||||  ||||| |||||||||||||| ||||||||||||| |||||||||| |||||| |||||    
T  35960971 gtgatatgaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttgga 35960872  T
Q  110 ggactgctctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 207  Q
    || ||||||||| ||| ||| |||||||||||| ||||||||  ||  || |||||||||||||||||| |||| || ||| ||||||| |||||||||     
T  35960871 gggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgttcatttcattaatttcttatctttattgcttta 35960772  T
Q  208 attatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     ||||||| || ||||| |||||||||||||||| || |||||||    
T  35960771 tttatgctggtggtgtttctctacacttagatttaggcctgtttt 35960727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 49091806 - 49091573
Alignment:
Q  20 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 119  Q
    |||||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||   ||||||    
T  49091806 aatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctct 49091707  T
Q  120 c-tccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 217  Q
    | |||| ||| |||||||||||||||  ||||| ||  || ||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
T  49091706 cttccccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttgttcctttctttcattgcttatct-ttgtgctttgattatgcttg 49091608  T
Q  218 tagtgttgctctacacttagatttgggtctgtttt 252  Q
    | ||||||||||||||||| || | ||||||||||    
T  49091607 tggtgttgctctacacttaaatctaggtctgtttt 49091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 2580536 - 2580298
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| | |||| ||||||||| ||  |||||  |||||| |||||||||||||||| ||| ||||||||||||||||||||||||  |||||    
T  2580536 aaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgct 2580438  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttcttt---cattgcttatctatattgctttgattat 212  Q
    |||||||  ||| ||||||||||||||||||| || || | || ||||||||||||||||||| |||||   |||||||||||| |||||||||| ||||    
T  2580437 ctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctctcttttttcattgcttatctttattgctttggttat 2580338  T
Q  213 gcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     ||||| ||||  |||||||||||||||| ||||||||||    
T  2580337 acttgtggtgtatctctacacttagatttaggtctgtttt 2580298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 28617176 - 28617386
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||||| ||||||| ||||||||| | |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||  |||||    
T  28617176 aaaataggtagaaattaggttttgttcttt-gtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgct 28617274  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| |||||||||||||||||||||||||| ||  || || |||||||||||| || ||| ||||| |||||||||| | ||||||||| |||||    
T  28617275 ctctcccccagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttttcttcctttc-ttgcttatctttgttgctttgaatatgc 28617373  T
Q  215 ttgtagtgttgct 227  Q
    |||| ||||||||    
T  28617374 ttgtggtgttgct 28617386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 3047401 - 3047186
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||  || |||    
T  3047401 aaaatgggtagaaattaggtcttgttcttt-gtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggct 3047303  T
Q  118 ctct--ccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||  ||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| | ||  |||||| | ||| |||||||||||    
T  3047302 ctctccccccagagcaggtcatattggaccgaactgggttacgatcttggtgtgtttgttttctttcttgc-tttattatct-tgttgatttgattatgc 3047205  T
Q  215 ttgtagtgttgctctacac 233  Q
    |||| |||||||| |||||    
T  3047204 ttgtggtgttgctttacac 3047186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 21983432 - 21983198
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcattt-gtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| | |||||||||||||| ||  |||||  |||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||  ||||    
T  21983432 aaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgc 21983333  T
Q  117 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatg 213  Q
    ||||||||  ||| |||||||||||||||||||||| || | || ||| ||||  ||||||||||| ||||| |||||||||| ||||||||||||||||    
T  21983332 tctctcccccagattaggtcatattggaccgaactgggtcaacaatctcggtgcatttgttccttttctttcgttgcttatctctattgctttgattatg 21983233  T
Q  214 cttgtagtgttgctctacacttagatttgggtctg 248  Q
     |||| ||||||||||||||  |||||| ||||||    
T  21983232 tttgtggtgttgctctacacccagatttaggtctg 21983198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 81 - 252
Target Start/End: Original strand, 9185178 - 9185349
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcct 178  Q
    ||||| ||||||||||||||||||||||||  || |||||||||  ||| ||||| |||||||||||||||| || | || |||||||||  ||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttggtgt--ttgttcct 9185275  T
Q  179 ttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||||||    
T  9185276 ctctttcattgcttatctttattgctttgtttatgcttgtggtgtttctctacacttagatctaggtctgtttt 9185349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 2479479 - 2479266
Alignment:
Q  21 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 120  Q
    ||||||||| |||||||||||||||| ||  |||||  |||||| |||||| |||||| |||||| |||||||||| ||||||||| |||  ||||||||    
T  2479479 atgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatcatagtggatttgagagctgctctc 2479381  T
Q  121 tccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 217  Q
     ||||||| |||||||||||| ||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  ||||||||    
T  2479380 cccctagattaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatgcttg 2479283  T
Q  218 tagtgttgctctacact 234  Q
    | |||||||||||||||    
T  2479282 tggtgttgctctacact 2479266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 9235648 - 9235741
Alignment:
Q  159 atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  9235648 atcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacatttagatttaggtctgtttt 9235741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 248
Target Start/End: Complemental strand, 21989006 - 21988822
Alignment:
Q  66 tttcttgtaactcattt-gtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca-tctt 163  Q
    ||||||||||||| ||| ||| ||||||||||  ||||||||||||   |||||||  || ||| |||||||||||||||||||||| || | || |||     
T  21989006 tttcttgtaactctttttgtaacactttcatcaaagtggattggagagttgctctcctcc-agattaggtcatattggaccgaactgggtcaacaatctc 21988908  T
Q  164 ggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctg 248  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||||  |||||| ||||||    
T  21988907 ggtgtgtttgttccttttctttcattgcttatctttattgctttgattatgtttgtggtgttgctctacacccagatttaggtctg 21988822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 44848636 - 44848852
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||| ||||| ||  |||||  |||||  ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44848734  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||  |||||||||||| ||||||||| || | ||   | ||||||||| |||||| |||||||||||||||||| | || |||||  |||||    
T  44848735 tctcccccaggttaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtatgttcc-ttctttcattgcttatctttgtt-ctttgtatatgc 44848832  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  44848833 ttgtggtgttgctctacact 44848852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 47263754 - 47263607
Alignment:
Q  87 cactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctt 183  Q
    |||||||||| |||||||||||||  |||||||| ||| | | |||||||||||||||||||||| || | ||   | |||||||||||||| |||  ||    
T  47263754 cactttcatcatagtggattggagagctgctctccccc-atattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttctta-tt 47263657  T
Q  184 tcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    ||||||||||||| |||| ||||| |||||||||| |||||||||||||||    
T  47263656 tcattgcttatctttatt-ctttgtttatgcttgtggtgttgctctacact 47263607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 22270107 - 22270201
Alignment:
Q  126 agagtaggtcatattggaccgaactgagttaccatct--tggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 218  Q
    |||||||||||  ||||||||||||| || | |||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  22270107 agagtaggtcaagttggaccgaactgggtgaacatctcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgattgt 22270201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 18413785 - 18413570
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  || |||  ||||||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  18413785 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaatctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgct 18413687  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||| ||| |||| |||||||| | |||||| || | ||   | |||||||||||||| ||||||||| ||||||||||   ||||||||  | |||    
T  18413686 ctctccccagattaggccatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt-ctttctttc-ttgcttatcttggttgctttgtatttgc 18413590  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  18413589 ttgtggtgttgctctacact 18413570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 9235533 - 9235596
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatt 81  Q
    |||||||||||| |||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  9235533 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt 9235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 21646152 - 21646028
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | ||| || |||||||||| |||||||||||||  |||||    
T  21646152 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgct 21646054  T
Q  118 ctc-tccctagagtaggtcatattgg 142  Q
    ||| |||||||| |||| ||||||||    
T  21646053 ctcttccctagattaggccatattgg 21646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24526052 - 24525985
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttg 83  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||||||||||    
T  24526052 gaaaatgggtagaaattaggttttgttcttt-gtgagcttgtcaaagctaatttcttgtaactcatttg 24525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 30814574 - 30814637
Alignment:
Q  130 taggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgctt 192  Q
    |||||||  ||||||||||||| || | || | |||||||||||||||||||||||||||||||    
T  30814574 taggtcaagttggaccgaactgggtcaacaattttggtgtgtttgttcctttctttcattgctt 30814637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 2361127 - 2361052
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  2361127 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 2361052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 21639954 - 21639849
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||  |||||||||||||  |||||    
T  21639954 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgct 21639856  T
Q  118 ctctccc 124  Q
    |||||||    
T  21639855 ctctccc 21639849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 29608750 - 29608825
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  29608750 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 29608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 31155974 - 31155920
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31155974 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31155920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 38671377 - 38671302
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||  ||||||||| | ||||||  |||||||||||| ||||||| |||||||||||||||    
T  38671377 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 48599489 - 48599414
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  48599489 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 48599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 8153397 - 8153430
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  8153397 aagctaatttcttgtaactcatttgtatctcttt 8153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 23565216 - 23565141
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||| |||||| ||||||||||||||||| | |||||| |  || ||||||||||||||||| |||||||| ||||    
T  23565216 aaaataggtagaaattaggtcttgttcttt-gtgagcttgttgaaactaatttcttgtaactcttttgtatctcttt 23565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 3259047 - 3259083
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  3259047 tttaagctaatttattgtaactcatttgtatctcttt 3259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4538694 - 4538627
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttt-tgagagcttttaagctaatttcttgtaactcatttgta 85  Q
    |||||||||||| ||||||  ||||||||| ||| |  |||||||||||||||||||||| ||||||||    
T  4538694 aaaatgggtagaaattaggg-ttgttctttatgaaattttttaagctaatttcttgtaacccatttgta 4538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 25615905 - 25615937
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatca 88  Q
    ||||||||||||||||||||| |||||||||||    
T  25615905 tttaagctaatttcttgtaacccatttgtatca 25615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 10077115 - 10077351
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||| |||||    
T  10077115 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgct 10077214  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10077215 ctctcccccagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 10077314  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  10077315 tgtggtgttgctctacacttagatttaggtctgtttt 10077351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 4630101 - 4629864
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||||| |||||||||||||||||||  ||||| |||| |||||||||||||||  |||||| ||||||||||||||||||||||||  |||||    
T  4630101 aaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgct 4630002  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca-tcttgg-tgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||||||| ||||||||||||||| ||||||||| | || |||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4630001 ctcttccctagattaggtcatattggactgaactgagtcaacaatctttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatgc 4629902  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  4629901 ttgtggtgttgctctacacttagatttaggtctgtttt 4629864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 31979660 - 31979424
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| |||| |||||||||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  31979660 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgct 31979561  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| || ||||||||||||||||||| ||  || |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  31979560 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctatttcattgcttatctttattgctttgattatgct 31979461  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||  ||||||||||||||||||||| ||||||||||    
T  31979460 tgtgatgttgctctacacttagatttaggtctgtttt 31979424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 22963806 - 22963611
Alignment:
Q  58 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttac 157  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||| ||| | |||||||||| ||||||||| || |     
T  22963806 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccccagatttggtcatattgcaccgaactgggtcaa 22963707  T
Q  158 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  22963706 caatcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 22963611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 23824587 - 23824782
Alignment:
Q  58 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttac 157  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||| ||| | |||||||||| ||||||||| || |     
T  23824587 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccccagatttggtcatattgcaccgaactgggtcaa 23824686  T
Q  158 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  23824687 caatcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 23824782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 18232992 - 18232756
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||| |||||||||||||| |||||| |||||||||| ||||| ||||||||  ||||    
T  18232992 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgct 18232893  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||||||||||  ||||| | || ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  18232892 ctctcccccagattaggtcatattggaccgatttgagtcaacaatcttggtgtgtttgttcctctctttcatcgcttatctttattgctttgattatgct 18232793  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||| ||||||    
T  18232792 tgtggtgttgctctacacttagatctaggtttgtttt 18232756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 24435921 - 24436143
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||||| |||||  ||||| |||||||||||||||||| ||||||||| || ||||||| |||||||| ||||| |||||    
T  24435921 aaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgct 24436020  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| || ||||||| | || ||||||| | |||||||| |||||||    
T  24436021 ctctcccctagagtaggtcatattggatcgaactgggttaccatcttggtgtgtttgttttctttcttgc-tttcttatctttgttgctttgtttatgct 24436119  T
Q  216 tgtagtgttgctctacacttagattt 241  Q
    ||| ||||  ||||||||||||||||    
T  24436120 tgttgtgt--ctctacacttagattt 24436143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 5572191 - 5572382
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  5572191 aaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 5572290  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 207  Q
    |||| ||||||| ||||||||||||||||||| || ||  || |||||||||||||||||| ||||||||| ||||||| | ||||||||||    
T  5572291 ctctcccctagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcatttctttcactgcttatatttattgctttg 5572382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 5017430 - 5017654
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||| |||||||||  ||||    
T  5017430 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtagattggagggttgct 5017518  T
Q  118 ctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||| |||| ||||||||||| |||||||||| || | || ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  5017519 ctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttgt-gctttgattatgct 5017617  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  5017618 tgtggtgttgctctacacttagatctaggtctgtttt 5017654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 21801294 - 21801531
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||||||  ||||| |||| |||||||||||||||| |||||| |||||| |||||||||||||||||  |||||    
T  21801294 aaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgct 21801393  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacc------atc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgat 209  Q
    | || ||| ||| ||||||||||||||| |||||| || | |      ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21801394 cgctcccccagattaggtcatattggactgaactg-gtcaacacttttatctttggtgtgtttgttcctttctttcattacttatctttattgctttgat 21801492  T
Q  210 tatgcttgtagtgttgctctacacttagatttgggtctg 248  Q
    |||| |||| || ||| ||||||||||||||| ||||||    
T  21801493 tatgattgtggtattgttctacacttagatttaggtctg 21801531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 31086423 - 31086603
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||   ||||    
T  31086423 aaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgct 31086522  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatct 196  Q
    |||| ||||||| ||| ||||||||||| |||||| ||  || ||||||||||||||||||||||||||||||||||||||    
T  31086523 ctctcccctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatct 31086603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 252
Target Start/End: Complemental strand, 31936671 - 31936498
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcct 178  Q
    ||||| ||||||||| ||||||||||||||  |||||||||| || ||| |||||||||||||||||||||  || | || |||||||||||||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcct 31936572  T
Q  179 ttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     ||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||  ||||||||||    
T  31936571 atctttcattgcttatctttattgctttgtttatgcttgtggtgttgctctacactttgattaaggtctgtttt 31936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 5757430 - 5757646
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| |   |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  5757430 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 5757528  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||| ||||||    
T  5757529 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtttatgc 5757626  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  5757627 ttgtggtgttgctctacact 5757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 31076892 - 31077116
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||| || | ||||||||||||||||| | || || |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||  |||||    
T  31076892 aaaatggataaaaattaggtcttgttcttt-gtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 31076990  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagttacc-atcttggtgtgtttgttcctttctttcattgcttatctatattgc-tttgattatgc 214  Q
     |||||   |||||||||||||||||||  ||||  |||||| |||||||| |||||||| | ||||||| | |||||| | | |||| |||||||||||    
T  31076991 atctcctagagagtaggtcatattggactaaactaggttaccaatcttggtatgtttgtttcattctttc-tggcttatatttgttgcttttgattatgc 31077089  T
Q  215 ttgtagtgttgctctacacttagattt 241  Q
    || |  ||||| |||||||||||||||    
T  31077090 ttatgatgttgttctacacttagattt 31077116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 21356182 - 21355965
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  ||| ||  ||||||||||||| || ||| |||||||||| |||||||||||||  |||||    
T  21356182 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgct 21356084  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||||| | ||| |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  ||||    
T  21356083 ctctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatg 21355986  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  21355985 cttgtggtgttgctctacact 21355965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 14521819 - 14521688
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||||||  |||||||| | ||||| ||  |||||||| |||||||||||||||||||||||||||||| || |||||||   ||||    
T  14521819 aaaatgtgtagaaattaggttgtgttcttt-gtgagctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattggagaggtgct 14521722  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaact 150  Q
    |||||| | |||||||||||||||||||||||||    
T  14521721 ctctcctcgagagtaggtcatattggaccgaact 14521688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 27165767 - 27165635
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcc 177  Q
    ||||||||||||||||||||| ||||||||| || |||| | ||| | ||||||||||||||||||| |||| ||  || ||| |||||||| |||||||    
T  27165767 ttgtatcactttcatcttagttgattggagggctactctgtcccccatagtaggtcatattggaccg-actgggtaaacaatctttggtgtggttgttcc 27165669  T
Q  178 -tttctttcattgcttatctatattgctttgatta 211  Q
     ||||||||||||||||||| | ||||||||||||    
T  27165668 ttttctttcattgcttatct-ttttgctttgatta 27165635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 252
Target Start/End: Complemental strand, 22709102 - 22708930
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 176  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||| |||||||| ||||||||  || | ||   | |||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaattttttggtgtgtttgttc 22709003  T
Q  177 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     || ||||| |||||||||| ||||||||||  ||  ||||| ||||||||||||| |||||| | ||||||||||    
T  22709002 -ttcctttc-ttgcttatctttattgctttggatacacttgtggtgttgctctaca-ttagatctaggtctgtttt 22708930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 1115055 - 1115159
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||| |||| ||||||  ||||| ||||  ||||||||||| | ||||||||||||  |||||||||| | | ||| |||||||||||||  |||||    
T  1115055 aaaatggatagaaattagggtttgttattttt-gagcttttaagttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctgct 1115153  T
Q  118 ctctcc 123  Q
    ||||||    
T  1115154 ctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 5572737 - 5572782
Alignment:
Q  207 gattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||    
T  5572737 gattatgcttgtggtgttgctctacacttagatttatgtctgtttt 5572782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 2973094 - 2973019
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  2973094 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 5043640 - 5043715
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||| ||||| ||||||| ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  5043640 gaaaatgagtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 5043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 12195578 - 12195524
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  12195578 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 12195524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 16569046 - 16569106
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagct--tttaagctaatttcttgtaac 76  Q
    ||||||||||||| ||||||| |||||| |||| |||||  |||||||||||||||||||||    
T  16569046 gaaaatgggtagaaattaggttttgttc-tttgtgagcttgtttaagctaatttcttgtaac 16569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 17763003 - 17763073
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 87  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  |||||||||||||||||||||||||||||    
T  17763003 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatc 17763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 26065233 - 26065286
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  26065233 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 26065286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 26085202 - 26085255
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  26085202 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 26085255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 28137563 - 28137494
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtat 86  Q
    ||||||||||||| ||||||  ||||||||| | ||||||  |||||||||||||||||||| |||||||||    
T  28137563 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtat 28137494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 40844798 - 40844563
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| |||||    
T  40844798 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgct 40844699  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||| ||| ||||||||||||||||||||||| |  || ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  40844698 ctctccccagattaggtcatattggaccgaactgaatcaacaatcttggtgtgttcgttcatttctttcattgcttatctttattgctttgattatgctt 40844599  T
Q  217 gtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||||||||||||||||| ||| ||||||    
T  40844598 gtagtgttgctctacacttagatttaggtttgtttt 40844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 18552823 - 18553061
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  18552823 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 18552922  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || |||||||||| |||||||||||||||||||| |||||| |||||||||||||||| |    
T  18552923 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtatttgttcctttctttcattgattatctttattgctttgattatgtt 18553022  T
Q  216 tgtagtgttgctctacacttagatttgggtctgttttac 254  Q
    ||| |||||||||||||||||||||| | ||||||||||    
T  18553023 tgtggtgttgctctacacttagatttagttctgttttac 18553061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 3328297 - 3328532
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||    
T  3328297 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgaagggctgct 3328395  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||| ||||| ||||||||||||||  |||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  3328396 ctctcctctagattaggtcatattggaatgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttttgattatgct 3328495  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  3328496 tgtggtgttgctctacacttagatttaggtctgtttt 3328532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 40592722 - 40592959
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||| | |||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||  || ||    
T  40592722 aaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttct 40592821  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgc 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40592822 ctctcccacagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatctatattgctttgattatgc 40592921  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  40592922 ttgtggtgttgctctacacttagatttaggtctgtttt 40592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 37466437 - 37466214
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||  ||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||    
T  37466437 aaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctact 37466339  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37466338 ctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgct 37466239  T
Q  216 tgtagtgttgctctacacttagatt 240  Q
    |||| ||||||||||||||||||||    
T  37466238 tgtaatgttgctctacacttagatt 37466214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 3715942 - 3716178
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||  |||||    
T  3715942 aaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgct 3716041  T
Q  118 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||| |||||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||    
T  3716042 ctctctcctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttgtgattatgct 3716141  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||||||||||||  |||||||||    
T  3716142 tgtggtgttgctctacacttagatttatgtctgtttt 3716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 26299135 - 26298899
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| |   || || ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||| |||||    
T  26299135 aaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgct 26299036  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| || ||||||||| ||||||||| || | || ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  26299035 ctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcgttgcttatctttattgctttgattatgct 26298936  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  26298935 tgtggtgttgctctacacttagatttaggtctgtttt 26298899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 48438361 - 48438125
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  48438361 aaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 48438262  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||  ||  |  |||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  48438261 ctctcccccagattaggtcatattggaccgaactaggtcaataatcttggtgtgtttgttcctttctgtcattgtttatctttattgttttgattatgct 48438162  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  48438161 tgtggtgttgctctacacttagatctaggtctgtttt 48438125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 24695104 - 24695339
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  || || ||||||||||||||||||||| |||||| |||||||||| ||| ||||| ||||  ||||    
T  24695104 aaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgct 24695203  T
Q  118 ctctccc-tagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||||| |||| |||||||||||||||||||||  ||  || |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  24695204 ctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcatttctttcattgtttatctttattgctttgattatgct 24695303  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||| |||||||||| | ||||||||    
T  24695304 tgt-gtgttgctctatacttagatttagctctgtttt 24695339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 8370428 - 8370663
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  8370428 aaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 8370526  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  8370527 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgc 8370625  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  8370626 ttgtggtgttgctctacacttagatctaggtctgtttt 8370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 1417431 - 1417655
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||| ||||||||||||  || || |||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||  ||||    
T  1417431 aaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataactcatt-gtaacactttcttcttagtggattggagggatgct 1417529  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1417530 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 1417629  T
Q  216 tgtagtgttgctctacacttagattt 241  Q
    |||  |||| ||||||||||||||||    
T  1417630 tgtgatgttactctacacttagattt 1417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 1736245 - 1736450
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1736345 ctctcccccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgttcctttctttcattgcttatgtttattgctttgattatgct 1736444  T
Q  216 tgtagt 221  Q
    ||||||    
T  1736445 tgtagt 1736450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 21711368 - 21711154
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||  ||||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  21711269 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgcct 21711170  T
Q  217 gtagtgttgctctaca 232  Q
     | |||||||||||||    
T  21711169 atggtgttgctctaca 21711154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 25795928 - 25795702
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||||||||  |||||    
T  25795928 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgct 25795829  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| ||| |||||||||||||||||||||  ||  || ||| ||||||||||||||| ||||||||||||||||| | ||||| ||| |||||||    
T  25795828 ctctcccccagattaggtcatattggaccgaactaggtcaacaatctttggtgtgtttgttcatttctttcattgcttatttttattgtttttattatgc 25795729  T
Q  215 ttgtagtgttgctctacacttagattt 241  Q
    |||| ||||||||||||||||||||||    
T  25795728 ttgtggtgttgctctacacttagattt 25795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 252
Target Start/End: Original strand, 25929435 - 25929618
Alignment:
Q  70 ttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttaccatcttggtgtg 169  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctccccccagagtaggtcgtattggaccgaactgggttaccatcttggtgtg 25929534  T
Q  170 tttg--ttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||  || ||||||| | || ||||||| | |||||||||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  25929535 tttgtttttctttcttgc-tttcttatctttgttgctttgattatgtttgtggtgttgctctacacttagatttaggtttgtttt 25929618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 252
Target Start/End: Original strand, 30709733 - 30709967
Alignment:
Q  21 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 120  Q
    ||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| |||||||||||||| ||||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctc 30709832  T
Q  121 t-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    | ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  30709833 tcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgctt 30709931  T
Q  217 gtagtgttgctctacacttagatttgggtctgtttt 252  Q
     | ||||||||||| |||||||| | ||||||||||    
T  30709932 atggtgttgctctaaacttagatctaggtctgtttt 30709967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 6794654 - 6794889
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||| ||||||||| ||  |||||  |||||||||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  6794654 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 6794752  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  | | |||||||||||||||| ||| | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6794753 ctctcccccatattaggtcatattggacctaaccgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgct 6794852  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||  || | |||||||||||||||| ||||||||||    
T  6794853 tgtgatgctactctacacttagatttaggtctgtttt 6794889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 4386868 - 4387084
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| ||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||  |||||    
T  4386868 aaaatgagtagaaattaggttttgttcttt-gtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgct 4386966  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| ||||||||||||| || ||  ||||| ||  || ||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  4386967 ctctcccccagagtaggtcatactgaactaaactgggtaaacaatctttgatgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 4387066  T
Q  215 ttgtagtgttgctctaca 232  Q
     ||| | |||| ||||||    
T  4387067 atgtggcgttgttctaca 4387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 36029240 - 36029060
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  36029240 aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 36029141  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatct 196  Q
     ||| ||| ||| ||||||||||||||| |||||| ||  || |||| |||||||||||||||||||||||||||||||||    
T  36029140 ttctcccccagattaggtcatattggacagaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatct 36029060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 16264495 - 16264273
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||| ||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  16264495 aaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 16264397  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||  || | ||   | || ||||||||||||||||||||||||| |||||| |  |||||||||||||     
T  16264396 tctcccccagattaggtcatattggaccgaactaggtcaacaatctttttgtgtgtttgttcctttctttcattgtttatct-ttgtgctttgattatgt 16264298  T
Q  215 ttgtagtgttgctctacacttagat 239  Q
    |||| ||||||||||||||||||||    
T  16264297 ttgtggtgttgctctacacttagat 16264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 35925625 - 35925393
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||||| |||||||  ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||| |    
T  35925625 aaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcatcatagtggattggagaactgc-c 35925528  T
Q  119 tctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
     ||||| | | |||||||||||||||||||||  || | ||   | ||||||||||||||| |||||||||||||| |||| |  || ||||||||||||    
T  35925527 cctccc-aaattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttcttttctttcattgctcatct-ttgtgttttgattatgct 35925430  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  35925429 tgtggtgttgctctacacttagatctaggtctgtttt 35925393  T

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Target: chr3; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 27974893 - 27975110
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  27974893 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 27974991  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||  |||||    
T  27974992 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttatttatg 27975089  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  27975090 cttgtggtgttgctctacact 27975110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 47923845 - 47924006
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttt-tgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||| | ||||||| ||| ||||| ||  | ||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| ||| ||||    
T  47923845 aaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgc 47923944  T
Q  117 tctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttc 176  Q
    ||||| ||||||| |||||||||||||| ||||||| ||  || ||||||||||||||||||    
T  47923945 tctctcccctagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttc 47924006  T

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Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 3323633 - 3323756
Alignment:
Q  20 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 119  Q
    |||||||||| |||| | ||||||||||||  ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||    
T  3323633 aatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattggagggctgttct 3323731  T
Q  120 ctc-cctagagtaggtcatattgga 143  Q
    ||| || ||| ||||||||||||||    
T  3323732 ctctcccagattaggtcatattgga 3323756  T

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Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 27986449 - 27986604
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 176  Q
    ||||| |||||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||     
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt- 27986547  T
Q  177 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    | ||||||| |||||||||| ||||||||||  ||||||||| |||||||||||||||    
T  27986548 cattctttc-ttgcttatctttattgctttgtatatgcttgtggtgttgctctacact 27986604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 33386669 - 33386825
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 176  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||||||||||||||||||||||  | | ||   | ||||||||||||||     
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttttggtgtgtttgttt 33386768  T
Q  177 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    ||| |||||||||||||||| ||||| |||| |||| ||||| |||||||||||||||    
T  33386769 ctt-ctttcattgcttatctttattgttttggttatacttgtggtgttgctctacact 33386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 39039995 - 39040151
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 176  Q
    ||||| |||||||||| |||||||||||||   || ||||| ||| ||| |||||||||||||||||||||  || | ||   | |||||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttc 39040094  T
Q  177 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    |||||||||||||||||||| |  ||||||| |||||||||| |||||||||||||||    
T  39040095 ctttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctctacact 39040151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 32143467 - 32143250
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  32143467 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 32143369  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| ||| |||||||||||||||||||||  || | ||   | |||||||||||||| ||| ||||| |||||||||| ||||||||||  | ||    
T  32143368 ctctcccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgtt-cttcctttc-ttgcttatctttattgctttgtatttg 32143271  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  32143270 cttgtggtgttgctctacact 32143250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 8126777 - 8126684
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 111  Q
    |||||||||||| |||| || |||||||||||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  8126777 aaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggagg 8126684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 21353708 - 21353604
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||  |||||||| | ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  21353708 aaaatgggtagaaattaggttgtgttcttt-gtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 21353610  T
Q  118 ctctcc 123  Q
    ||||||    
T  21353609 ctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 34491346 - 34491449
Alignment:
Q  126 agagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 223  Q
    |||||||||||  ||||||||||||| ||  || ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| || |    
T  34491346 agagtaggtcaagttggaccgaactgggtgaacaatctttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgattgtggttt 34491445  T
Q  224 tgct 227  Q
    ||||    
T  34491446 tgct 34491449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 8126682 - 8126612
Alignment:
Q  182 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||| ||| ||||||    
T  8126682 tttcattgcttatctttattgctttgattatgagtgtggtgttgctctacacttagatttaggtatgtttt 8126612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 26928541 - 26928757
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt--cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| |||  |||||||| | |||||| |||||||||| |||||||||||||   |||    
T  26928541 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgc 26928639  T
Q  117 tctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 212  Q
    ||||| ||| ||| ||||||||||||| | |||||| || | ||   | |||||||||||||| ||||||||| | |||||||| ||||||||||  | |    
T  26928640 tctctcccccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt-ctttctttc-tagcttatctttattgctttgtattt 26928736  T
Q  213 gcttgtagtgttgctctacac 233  Q
    |||||| ||||||||||||||    
T  26928737 gcttgtggtgttgctctacac 26928757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 27453056 - 27452914
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 161  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| |||  || ||||||||||||||||||||||  | | ||   |     
T  27453056 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T
Q  162 ttggtgtgtttgttcctttctttcattgcttatctatattgctttg 207  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||    
T  27452957 ttggtgtgtttgttcc-ttctttc-ttgcttatctttattgctttg 27452914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 27026925 - 27026856
Alignment:
Q  182 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||||||| | | ||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  27026925 tttcattgcttatctttgt-gctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 27026856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 25929365 - 25929405
Alignment:
Q  70 ttgtaactcatttgtatcactttcatcttagtggattggag 110  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggag 25929405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 27038270 - 27038201
Alignment:
Q  182 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||||||| | | ||||||||||||||||| |||||||||||||||||||| | | ||||||||    
T  27038270 tttcattgcttatctttgt-gctttgattatgcttgtggtgttgctctacacttagatctagatctgtttt 27038201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 32744552 - 32744516
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||||||||||||||||||||||||||||    
T  32744552 tttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 47649716 - 47649656
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactc 78  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| ||||||||||||||||    
T  47649716 aaaatgggtagaaattaggtcttgttcttgtggaagcttgtaagttaatttcttgtaactc 47649656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 760860 - 760935
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||||| ||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  760860 gaaaatgggtagaaattaggtct-gttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 1306046 - 1305878
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 161  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||| ||| ||||||| |||| |||||||| | |||||| || | ||   |     
T  1306046 tttcttgtaaccc-tttgtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattgg-ctgaactgggtcaacaatctt 1305949  T
Q  162 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    |||||||||||||| ||| ||||| ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  1305948 ttggtgtgtttgtt-cttcctttc-ttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 1305878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 1417230 - 1417176
Alignment:
Q  198 tattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||||||||||||  || | |||||||||||||||| ||||||||||    
T  1417230 tattgctttgattatgcttgtgatgctactctacacttagatttaggtctgtttt 1417176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 22835157 - 22835082
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  22835157 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 32891116 - 32891192
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| |||| || ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  32891116 gaaaatgggtagaaattaagttttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 39153516 - 39153441
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| |||||| || | ||||||  ||||||||||||||||||||||||||||||| ||||    
T  39153516 gaaaatgggtagaaattaggt-ttgttcatt-gtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 29100299 - 29100172
Alignment:
Q  25 gtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcact-ttcatcttagtggattggaggactgctctc-tc 122  Q
    ||||| ||||||  ||||||||| | ||| ||||||||||||||||| ||||   ||||||||||| || ||| ||||||| |||||  |||||||| ||    
T  29100299 gtagaaattagggtttgttcttt-gtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctctcttc 29100201  T
Q  123 cctagagtaggtcatattggaccgaactg 151  Q
    |||| ||| ||| || |||||||||||||    
T  29100200 cctatagtgggtaattttggaccgaactg 29100172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 746953 - 747007
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||    
T  746953 tagtggatcggaggactgctctctcccccagactaggtcagattggaccgaactg 747007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 5366301 - 5366351
Alignment:
Q  55 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 105  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||    
T  5366301 ttttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 6063507 - 6063453
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  6063507 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 6063453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 46860487 - 46860562
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  46860487 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 50494195 - 50494249
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  50494195 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 50494249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 4570007 - 4570040
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  4570007 aagctaatttcttgtaactcatttgtatctcttt 4570040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 34491225 - 34491295
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 87  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  |||||||||||||||||||||||||||||    
T  34491225 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatc 34491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 47924007 - 47924048
Alignment:
Q  211 atgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||| |||||||||||||||||||| | ||||||||||    
T  47924007 atgcttgtggtgttgctctacacttagatctaggtctgtttt 47924048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 51398869 - 51398902
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  51398869 aagctaatttcttgtaactcatttgtatctcttt 51398902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 53921616 - 53921587
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatca 88  Q
    ||||||||||||||||||||||||||||||    
T  53921616 aagctaatttcttgtaactcatttgtatca 53921587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 9581297 - 9581370
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||| ||||||| ||||||||| | ||||||  ||||||||||||||| |||| |||||||||| ||||    
T  9581297 aaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttttaacccatttgtatcccttt 9581370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 23392025 - 23391989
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||| |||||||||||||| |||||||||||||||    
T  23392025 tttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 47098773 - 47099010
Alignment:
Q  16 tgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactg 115  Q
    |||||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  47098773 tgaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctg 47098871  T
Q  116 ctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||||||||  ||| | |||||||||||||||||||| || | || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  47098872 ctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttgattgcttatctttattgctttgattata 47098971  T
Q  214 cttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  47098972 cttgtggtgttgctctacacttagatttaggtctgtttt 47099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 19073075 - 19072842
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19072975 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 19072876  T
Q  215 ttgtagtgttgctctacacttagatttgggtctg 248  Q
    |||| |||||||||||||||||||||| ||||||    
T  19072875 ttgtggtgttgctctacacttagatttaggtctg 19072842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 19120965 - 19120732
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19120865 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 19120766  T
Q  215 ttgtagtgttgctctacacttagatttgggtctg 248  Q
    |||| |||||||||||||||||||||| ||||||    
T  19120765 ttgtggtgttgctctacacttagatttaggtctg 19120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 16124466 - 16124703
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| ||| |||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||     
T  16124566 ctctcccccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgttccttttctttcatagcttatctttattgctttgattatgt 16124665  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| ||||||||||||| |||||| | ||||||||||    
T  16124666 ttgtggtgttgctctacatttagatctaggtctgtttt 16124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 13598545 - 13598309
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||| ||||||||||| ||  ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||    
T  13598545 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 13598446  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13598445 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 13598346  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||| |||||||||||||| | ||||||||||    
T  13598345 tgtggtgtttctctacacttagatctaggtctgtttt 13598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 29651958 - 29651722
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| ||||||||||||| || |||||| |||||||||| |||||||||||||  |||||    
T  29651958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgct 29651859  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29651858 ctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 29651759  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| |  |||||||||    
T  29651758 tgtggtgttgctctacacttagatctaagtctgtttt 29651722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 47703886 - 47704122
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||  |||||    
T  47703886 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgct 47703985  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||    
T  47703986 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgttttttcctttctttcattgcttatctttattgctttgattaaact 47704085  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||| ||||    
T  47704086 tgtggtgttgctctacacttagatttaggtctatttt 47704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 27104362 - 27104558
Alignment:
Q  58 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagtta 156  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||||| |||||||||||||||| || |    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtca 27104461  T
Q  157 cca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
     || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  27104462 acaatcttggtgtgtttgttcctttatttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtttt 27104558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 47102800 - 47103027
Alignment:
Q  26 tagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc- 124  Q
    |||| |||||| ||||||||||||   |||| |||| ||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||||||     
T  47102800 tagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccc 47102898  T
Q  125 tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 223  Q
    |||| |||||||||||||||||||||| || | || | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||    
T  47102899 tagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttgttcctttctttgattgcttatctttattgctttgattatacttgtggtgt 47102998  T
Q  224 tgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||||||||| ||||||||||    
T  47102999 tgctctacacttagatttaggtctgtttt 47103027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 9476408 - 9476173
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||| |||| |||||||||||||||| ||  ||||| |||||||||||||| |||||| ||||||  ||||||||| |||||||||||||  |||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||||||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  9476308 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatcttttttgctttgattatgct 9476209  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||  ||||  |||||||||| ||||  |||||||||    
T  9476208 tgtgatgtt-ttctacacttatatttatgtctgtttt 9476173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 252
Target Start/End: Complemental strand, 775757 - 775583
Alignment:
Q  80 tttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcc 177  Q
    |||||| ||||||||||||||||||||||||  || |||||||||  ||| ||||||||||||||||||| || || | || ||||| ||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttgttcc 775658  T
Q  178 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  775657 tttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtttt 775583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 32889586 - 32889349
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  32889586 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 32889488  T
Q  117 tctctccct-agagtaggtcatattggaccgaact-gagttaccatcttggtgtgtttgttcctttcttt-cattgcttatctatattgctttgattatg 213  Q
    ||| ||||  ||| ||||||||||||||||||||| ||   || |||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||     
T  32889487 tctatcccccagactaggtcatattggaccgaactagatcaacaatcttggtgtgtttgttcctctcttttcattgcttatctttattgctttggttata 32889388  T
Q  214 cttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||| |||||||||||||||||||||| | ||||||||    
T  32889387 cttgtggtgttgctctacacttagatttagatctgtttt 32889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 26644849 - 26645066
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| || ||||||||||  ||||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  26644948 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 26645046  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  26645047 ttgtggtgttgctctacact 26645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 17345470 - 17345687
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||| ||||||||| | | ||| ||| |||||||||||||| | |||||||| ||| ||||||||||||||||||||  || ||    
T  17345470 aaaatgggtagaaattaggttttgttcttt-gtgggctcttatgctaatttcttgtagcacatttgtaccacgttcatcttagtggattggagagctcct 17345568  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    || |||| ||||||||||||||| |||||||||| ||| |  ||| ||  ||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  17345569 ctttccccagagtaggtcatattagaccgaactgggttaataatcttttatgtttttgttcatttctttcattgcttatctttatggctttgattatgct 17345668  T
Q  216 tgtagtgttgctctacact 234  Q
    | | |||||| ||||||||    
T  17345669 tatggtgttgttctacact 17345687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 3281853 - 3281637
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| | |||||||||||  ||||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagt---taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||||||||||||||||||||| ||   ||   | ||| ||||||||||||||||||||||||||||||| |  ||||||| |||| |    
T  3281754 tctcccccagattaggtcatattggaccgaactgggtcaataatcttttgatgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttattc 3281656  T
Q  215 ttgtagtgttgctctacac 233  Q
    |||| ||||||||||||||    
T  3281655 ttgtggtgttgctctacac 3281637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 22819575 - 22819416
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||| |||| |||| ||||| |||||| | |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  22819575 aaaatggttagaaattatgtcttattcttt-gtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggctact 22819477  T
Q  118 ctct--ccctagagtaggtcatattggaccgaactgagttaccatcttg-gtgtgtttgtt 175  Q
    ||||  ||| |||||||||||||||||||| || || |||||||||||| |||||||||||    
T  22819476 ctctccccccagagtaggtcatattggaccaaattgggttaccatcttgtgtgtgtttgtt 22819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 9023794 - 9024017
Alignment:
Q  22 tgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct-c 120  Q
    |||||||| |||||||||| |||||| | ||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||  || || |      
T  9023794 tgggtagaaattaggtcttattcttt-gtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagctactatat 9023892  T
Q  121 tccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgta 219  Q
    |||| | | |||||||||||||| ||||||  |||||||      |||||||| || ||||||| | || ||||||| |||||| ||||||||||||||     
T  9023893 tccccataataggtcatattggagcgaactaggttacca------tgtgtttgttttctttcttgc-tttcttatctttattgcattgattatgcttgtg 9023985  T
Q  220 gtgttgctctacacttagatttgggtctgttt 251  Q
    |||||||| ||||||||||||| ||| |||||    
T  9023986 gtgttgctatacacttagatttaggtatgttt 9024017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 37069912 - 37069700
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  || ||| |||   ||||||| |||||| |||||||||| |||||||| ||||   |||||    
T  37069912 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatttt---gtaactc-tttgtaacactttcatcatagtggatcggagagatgctc 37069817  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||  ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||| |||| |||||||||| |  ||||||| ||||||    
T  37069816 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttatttcgttgcttatct-ttgtgctttgtttatgc 37069718  T
Q  215 ttgtagtgttgctctaca 232  Q
    |||| |||||||||||||    
T  37069717 ttgtggtgttgctctaca 37069700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 232
Target Start/End: Original strand, 21536525 - 21536736
Alignment:
Q  23 gggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctc 122  Q
    ||||||| |||| || |||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||  |||||||||||||  ||||||||||    
T  21536525 gggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctc 21536623  T
Q  123 cct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 218  Q
    ||  ||| |||||||| ||  ||||||||| || | ||   | |||||||||||||||||||||||||| |||||||| |  |||||||  |||||||||    
T  21536624 ccccagattaggtcattttttaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcatcgcttatct-ttgtgctttgtctatgcttgt 21536722  T
Q  219 agtgttgctctaca 232  Q
     |||||||||||||    
T  21536723 ggtgttgctctaca 21536736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 13604574 - 13604788
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||||||||||||| ||  || ||  ||||||  ||||||||||||| |||||| || ||||||| |||||||||||||  |||||    
T  13604574 aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgct 13604672  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| | | |||||||||||| ||| ||||| || | ||   | |||||||||||||||| |||||||||| ||||||| ||||||||||  ||||    
T  13604673 ctctcccccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattacttatctttattgctttgtatatg 13604771  T
Q  214 cttgtagtgttgctcta 230  Q
    |||||  ||||||||||    
T  13604772 cttgtgatgttgctcta 13604788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 50521165 - 50521271
Alignment:
Q  131 aggtcatattggaccgaactgagttacca--tctt-ggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 227  Q
    ||||||||||| ||||||||| |||||||  |||| |||||||||||||||||||||||||| || ||| |||||||||||||||| |||| |||||| |    
T  50521165 aggtcatattgaaccgaactgggttaccaaatctttggtgtgtttgttcctttctttcattgtttctctttattgctttgattatgtttgtggtgttgtt 50521264  T
Q  228 ctacact 234  Q
    |||||||    
T  50521265 ctacact 50521271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 40816844 - 40816918
Alignment:
Q  178 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  40816844 tttctttcattacttatctttattgctttgattatgctcgtggtgttgctctacacttagatttaggtctgtttt 40816918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 40816765 - 40816844
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 98  Q
    ||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  40816765 aaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 8550942 - 8550867
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  ||||||||||||||||||||||||||||||| ||||    
T  8550942 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 47179929 - 47179982
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  47179929 tagtggattggagggctgctctctccccagactaggtcagattggaccgaactg 47179982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 19358794 - 19358899
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  19358794 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 19358892  T
Q  118 ctctccc 124  Q
    |||||||    
T  19358893 ctctccc 19358899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 19361431 - 19361600
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 161  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| | | ||||||||||| ||| |||||| || | ||   |     
T  19361431 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19361528  T
Q  162 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    |||||||||||||| ||| ||||  ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  19361529 ttggtgtgtttgtt-cttccttttcttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 19361600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 19380071 - 19380240
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 161  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| | | ||||||||||| ||| |||||| || | ||   |     
T  19380071 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19380168  T
Q  162 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    |||||||||||||| ||| ||||  ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  19380169 ttggtgtgtttgtt-cttccttttcttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 19380240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 24202720 - 24202825
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  24202720 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 24202818  T
Q  118 ctctccc 124  Q
    |||||||    
T  24202819 ctctccc 24202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 47177578 - 47177631
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||| |||||||    
T  47177578 tagtggattggagggctgctctctccccagactaggtcagattggatcgaactg 47177631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 48382471 - 48382532
Alignment:
Q  58 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 119  Q
    |||| ||||||||||||||  |||||||||||||||||| || |||||||||| | ||||||    
T  48382471 taagttaatttcttgtaacctatttgtatcactttcatcatattggattggagaattgctct 48382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 35109515 - 35109623
Alignment:
Q  46 tttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggacc 145  Q
    |||| ||||||||||||||||||||||||||  |||||||||  | | ||| ||||||||  |||  ||  |||||||  ||| |||||||| |||||||    
T  35109515 tttgtgagcttttaagctaatttcttgtaacctatttgtatctatcttatcatagtggatcagagagcttgtctctcctcagattaggtcattttggacc 35109614  T
Q  146 gaactgagt 154  Q
     ||||||||    
T  35109615 aaactgagt 35109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 40122314 - 40122278
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40122314 tttaagctaatttcttataactcatttgtatcacttt 40122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 9459482 - 9459428
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  9459482 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 9459428  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 9463309 - 9463255
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  9463309 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 9463255  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 16226383 - 16226437
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16226383 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16226437  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 16231779 - 16231833
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16231779 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16231833  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 193666 - 193699
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  193666 aagctaatttcttgtaactcatttgtatctcttt 193699  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 2617732 - 2617789
Alignment:
Q  98 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagt 154  Q
    |||||||| ||||| ||||||||||||| ||| |||||||  ||||||||||||||||    
T  2617732 tagtggatcggagggctgctctctccctcagactaggtcaatttggaccgaactgagt 2617789  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 10925278 - 10925311
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  10925278 aagctaatttcttgtaactcatttgtatctcttt 10925311  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 151
Target Start/End: Complemental strand, 13138014 - 13137985
Alignment:
Q  122 ccctagagtaggtcatattggaccgaactg 151  Q
    ||||||||||||||||||||||||||||||    
T  13138014 ccctagagtaggtcatattggaccgaactg 13137985  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 32736947 - 32737083
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||  |||||||||   || ||||||||||||||| |||||||   |||||||||| |||||| |||| |||  |||   | ||    
T  32736947 aaaatgggtagaaattagggtttgttctttat-gaacttttaagctaattttttgtaacctctttgtatcaccttcatcatagttgatcagagagtttct 32737045  T
Q  118 ctctc-cctagagtaggtcatattggaccgaactgagt 154  Q
    ||||| || |||||||||||| ||||| ||| ||||||    
T  32737046 ctctctcccagagtaggtcattttggatcgatctgagt 32737083  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 42298088 - 42298055
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  42298088 aagctaatttcttgtaactcatttgtatctcttt 42298055  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 50169323 - 50169290
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  50169323 aagctaatttcttgtaactcatttgtatctcttt 50169290  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 197024 - 196988
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  197024 tttaagttaatttcttgtaactcatttgtatcccttt 196988  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 834283 - 834247
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  834283 tttaagctaatttcttgtaacccatttgtatcccttt 834247  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 17319113 - 17319157
Alignment:
Q  107 ggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    ||||| |||||||||||||||| |||||||  |||||||||||||    
T  17319113 ggagggctgctctctccctagactaggtcaatttggaccgaactg 17319157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 10047526 - 10047303
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10047426 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgct 10047327  T
Q  216 tgtagtgttgctctacacttagat 239  Q
    ||| ||||||||||||||||||||    
T  10047326 tgtggtgttgctctacacttagat 10047303  T

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Target: chr4; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 6743366 - 6743590
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  |||| | |||||||||| ||||| ||| |||||| |||||||||| |||||||||||||| |||||    
T  6743366 aaaatgggtagaaattaggtcttgttcttttgtaagctat-aagctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgct 6743464  T
Q  118 ctctccc-tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgttcctttctttcattgcttatctatat-tgctttgattatgct 215  Q
    ||||||| |||| |||||||||||||||||||||| || | |||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||    
T  6743465 ctctcccgtagattaggtcatattggaccgaactgggtcaacatcttggtgtgtttgttcctttcttccatttcttatctctatatgctttgattatgct 6743564  T
Q  216 tgtagtgttgctctacacttagattt 241  Q
    ||| ||||||||||||||| ||||||    
T  6743565 tgtggtgttgctctacactcagattt 6743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 54867330 - 54867095
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||| |||||||| ||  ||||| |||||||||||||| |||||  |||||| || ||||||| |||| ||||| ||| |||||    
T  54867330 aaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgct 54867231  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||| ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  54867230 ctctccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattactttgattatgctt 54867131  T
Q  217 gtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || |||||||||||||||||||| |  |||||||||    
T  54867130 gtggtgttgctctacacttagatctatgtctgtttt 54867095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 65 - 252
Target Start/End: Complemental strand, 39246094 - 39245905
Alignment:
Q  65 atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tct 162  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||||||| || | || |||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  163 tggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  39245994 tggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgcctgtggtgttgctctacacttagatttaggtctgtttt 39245905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 42599523 - 42599747
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||  ||||    
T  42599523 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacattttcatcttagtggattggagggttgct 42599621  T
Q  118 ctctc---cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||||   || | | || |||||||||||| ||| || || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42599622 ctctctcccccatattatgtcatattggactgaattgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 42599721  T
Q  214 cttgtagtgttgctctacacttagat 239  Q
    ||||| ||||||||||||| ||||||    
T  42599722 cttgtggtgttgctctacatttagat 42599747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 38152389 - 38152625
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||||| |||||||||||||||| ||  ||||| |||||||||||||| |||||| |||||| |||||||| | |||||||||||||  |||||    
T  38152389 aaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgct 38152488  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| || ||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  38152489 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgct 38152587  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttta 253  Q
    ||| |||||||| ||||||||||| | |||||||||||    
T  38152588 tgtggtgttgctatacacttagatctaggtctgtttta 38152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 25861983 - 25862208
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||  |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||||||||||||| | |||    
T  25861983 aaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtggattggagggccgct 25862071  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| | | ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  25862072 ctcttccccatattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttattcctttctttcattgcttatctttattgctttgattatgct 25862171  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  25862172 tgtggtgttgctctacacttagatttaggtctgtttt 25862208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 3796469 - 3796702
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||   ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||| ||| | | ||||||||||||||| |||||| ||  || ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  3796569 ctctcccccatattaggtcatattggacggaactgggtcaacaatctttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgc 3796668  T
Q  215 ttgtagtgttgctctacacttagatttgggtctg 248  Q
    ||||  |||| |||||||||||||||| ||||||    
T  3796669 ttgtgatgttactctacacttagatttaggtctg 3796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 36315181 - 36315381
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttaccat-cttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||  ||| |||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgctt 36315379  T
Q  217 gt 218  Q
    ||    
T  36315380 gt 36315381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 36329390 - 36329590
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttaccat-cttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||  ||| |||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgctt 36329588  T
Q  217 gt 218  Q
    ||    
T  36329589 gt 36329590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 24333957 - 24333723
Alignment:
Q  18 aaaatgggtagagattaggtcttgtt-cttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| ||||||| || || ||| ||  ||||| ||||||||||| || |||||| |||||| ||| |||||| |||||||||||||  ||||    
T  24333957 aaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgc 24333858  T
Q  117 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||||  | | ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24333857 tctctcccccaaattaggtcatattggaccgaactgagttaacaatcttggtgtgtttgtttctttctttcattgcttatctttattgctttgattatgc 24333758  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||   |||||||||||||||||||| | ||||||||||    
T  24333757 tt---gtgttgctctacacttagatctaggtctgtttt 24333723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 5147824 - 5147590
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||||||||||||  |||||| |||||||||| || |||| |||||  |||||    
T  5147824 aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgct 5147725  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    | |||||  | | |||||||||||||||||||||| || | || ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  5147724 ccctcccccaaattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatctctattgttttgattatgtt 5147625  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtt 250  Q
    ||| |||||||||||||||||||||| ||||||||    
T  5147624 tgtggtgttgctctacacttagatttaggtctgtt 5147590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 39774245 - 39774414
Alignment:
Q  8 gagtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattg 107  Q
    |||||| |||||||| |||||| |||||||||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  39774245 gagtgacatgaaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattg 39774344  T
Q  108 gaggactgctctct-ccctagagtaggtcatattggaccgaactgagttaccatcttg-gtgtgtttgtt 175  Q
    |||  ||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39774345 gagagctgctctatcccccagagtaggtcatattggaccgaactgagttaccatcttgtgtgtgtttgtt 39774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 67 - 251
Target Start/End: Original strand, 34495822 - 34496007
Alignment:
Q  67 ttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttaccatcttgg 165  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||| ||||||||||||  |||||||||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttaccatcttgg 34495921  T
Q  166 tgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgttt 251  Q
    |||||||| || |||||||||||||||| | | |||||||||||||||||||||  || |||| ||||||||| |||||| ||||||    
T  34495922 tgtgtttgttttctttctttcattgcttgt-tttattgctttgattatgcttgtgttgatgctttacacttagttttgggactgttt 34496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 3777695 - 3777461
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||| |||||||||| ||  || ||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  || ||    
T  3777695 aaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctact 3777597  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||| ||||| ||||| |||||||||||||||| || | || ||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  3777596 ctctcctctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgct 3777498  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| || ||| ||||||||||||| | ||||||||||    
T  3777497 tgtggttttgttctacacttagatctaggtctgtttt 3777461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 5143406 - 5143170
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||||||||||||||| ||   ||||  |||||| |||||||||| |  |||||| |||||||||| |||||| ||||||  |||||    
T  5143406 aaaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgct 5143307  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||  || | || |||  |||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  5143306 ctctcccccagattaggtcatattggaccgaactaggtcaacaatctcagtgtgtttgttcctttctttcattgcttatctctattgttttgattatgtt 5143207  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||| ||||||||||||||| ||||||||||    
T  5143206 tgtggtgttgttctacacttagatttaggtctgtttt 5143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 5269154 - 5269364
Alignment:
Q  20 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 119  Q
    |||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||||||||||||| |||||||    
T  5269154 aatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtggattggagggctgctct 5269242  T
Q  120 ctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 217  Q
    |||||  ||| |||||||||||||||||||||  || | || ||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  5269243 ctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttgttcctttctttcatttcttatatttattgctttgattatgcttg 5269342  T
Q  218 tagtgttgctctacacttagat 239  Q
    | ||||||||||||||||||||    
T  5269343 tggtgttgctctacacttagat 5269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 18377514 - 18377348
Alignment:
Q  10 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 109  Q
    |||| ||||||||||||||| |||||| ||||||  |||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  18377514 gtgacatgaaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatgga 18377415  T
Q  110 ggactgctctctcc-ctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 175  Q
    || ||||||||||| | |||||||||||||| | || |||||| |||||||||||||||||||||||    
T  18377414 gggctgctctctcctccagagtaggtcatatagaactgaactgggttaccatcttggtgtgtttgtt 18377348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 5396623 - 5396840
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||| | |||||||||| |||||||||||||  ||||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  119 tctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||| | ||| |||||||||||||||||||||| || | ||   | ||||||||||| ||||||||||||||||||||||| |  ||||||| ||||||    
T  5396722 tctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttcttcctttctttcattgcttatct-ttgtgctttgtttatgc 5396820  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  5396821 ttgtggtgttgctctacact 5396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 16623243 - 16623424
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| | ||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  16623243 aaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 16623342  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatct 196  Q
    |||||| | ||| |||||||||||| ||||||||| ||  || ||||||||||||||||||| |||||||||||||||||||    
T  16623343 ctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatct 16623424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 16630643 - 16630866
Alignment:
Q  31 attaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctcc-ctagag 129  Q
    ||||| |||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||| ||||||| | |||     
T  16630643 attagatcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagat 16630742  T
Q  130 taggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 227  Q
    || ||||||||||||||||||  ||  || | ||||||||||||||||| ||||||||||||||||||| | || |||||||||||||||| ||||||||    
T  16630743 tatgtcatattggaccgaactaggtcaacaaccttggtgtgtttgttccttttctttcattgcttatctttgtt-ctttgattatgcttgtggtgttgct 16630841  T
Q  228 ctacacttagatttgggtctgtttt 252  Q
     ||||||||||| | ||| ||||||    
T  16630842 ttacacttagatctaggtttgtttt 16630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 5112383 - 5112226
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||| | ||||||||| ||| ||||  ||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||  |||||    
T  5112383 aaaataggtacaaattaggtctcgtt-ttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgct 5112285  T
Q  118 ctc-tccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 175  Q
    |||  ||| | ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5112284 ctcacccccaaagtagatcatattggaccgaactgggttaccatcttggtgtgtttgtt 5112226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 31985585 - 31985801
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  31985585 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 31985683  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||| ||| ||||| |||||||||| ||||||||||  |||||    
T  31985684 ctctccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt-cttcctttc-ttgcttatctttattgctttgtatatgc 31985781  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| | |||||||||||||    
T  31985782 ttgtggagttgctctacact 31985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 1983249 - 1983473
Alignment:
Q  16 tgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactg 115  Q
    |||||| || |||| |||| || ||||||||| | ||||||  |||||||||||||||||| | ||||||||||||| ||| |||||||||||||  |||    
T  1983249 tgaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctg 1983347  T
Q  116 ctctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatg 213  Q
    || ||||||  | |||||||||||||||||||||||| |||||||| |||||||||||| || ||||||| | || ||||| | | ||| ||||||||||    
T  1983348 ctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgc-tttcttatat-tgttgttttgattatg 1983445  T
Q  214 cttgtagtgttgctctacacttagattt 241  Q
     |||| ||| |||| |||||||||||||    
T  1983446 tttgtggtgatgctttacacttagattt 1983473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 8689498 - 8689647
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcc 177  Q
    ||||| |||||||||| |||||||| ||||  || ||||| ||| | | ||| ||||||||||||||||||  | | ||   | |||||||||||||| |    
T  8689498 ttgtaacactttcatcatagtggataggagagctcctctccccc-atattagatcatattggaccgaactggatcaacaatcttttggtgtgtttgttac 8689596  T
Q  178 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctct 229  Q
    ||||||||||||||||||| |  ||||||| |||||||||| ||||||||||    
T  8689597 tttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctct 8689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 31474163 - 31474239
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttctttt-gagagcttttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| |||||||||||||||||| |||    || ||||||||||||||||||||||||||||| ||||    
T  31474163 gaaaatgggtagaaattaggtcttgttctttttgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 31474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 37782008 - 37781917
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 110  Q
    |||||||||||| |||| |  ||||||||| | ||| ||||||||||||||||||||||   ||||||||||||| ||  |||||||||||||    
T  37782008 aaaatgggtagaaattaagatttgttcttt-gtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggag 37781917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 28468542 - 28468696
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 176  Q
    ||||| |||||||||| |||||||||||||  ||||||||||| | ||| ||||||||||||| | |||||| || | ||   | ||||||||||||||     
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt- 28468639  T
Q  177 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    ||| ||||| ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  28468640 cttcctttc-ttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 28468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 18709227 - 18709173
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||    
T  18709227 tagtggattggaggactgctctctcccccagactaggtcagattggaccgaactg 18709173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 18847423 - 18847476
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| |||||||||||| ||| |||||||  |||||||||||||    
T  18847423 tagtggattggagggctgctctctccccagactaggtcaatttggaccgaactg 18847476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 22134680 - 22134627
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| |||||||||||| ||| |||||||  |||||||||||||    
T  22134680 tagtggattggagggctgctctctccccagactaggtcaatttggaccgaactg 22134627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 16624144 - 16624195
Alignment:
Q  201 tgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||| ||||| ||||||||||||||||| || | ||||||||||    
T  16624144 tgctttgattattcttgtggtgttgctctacacttaaatctaggtctgtttt 16624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 21688436 - 21688475
Alignment:
Q  179 ttctttcattgcttatctatattgctttgattatgcttgt 218  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  21688436 ttctttcattgcttatctttattgctttgattatgattgt 21688475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 379393 - 379468
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  379393 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 8665421 - 8665496
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||  ||||||||| |||||||| |  |||||||||||||||||| |||||||||| ||||    
T  8665421 gaaaatgggtagaaattaggg-ttgttcttt-gagagcttgttgaagctaatttcttgtaacccatttgtatctcttt 8665496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 12073405 - 12073480
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||| |||||||||||||||||| ||||    
T  12073405 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttattgtaactcatttgtatctcttt 12073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 16931852 - 16931798
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16931852 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16931798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 16934206 - 16934152
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16934206 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16934152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 22780436 - 22780382
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  22780436 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 22780382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 22782801 - 22782747
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  22782801 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 22782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 44599901 - 44599847
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  44599901 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 44599847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 52467509 - 52467434
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||| ||||||||| |||||||||||||||    
T  52467509 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 5871834 - 5871908
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||| ||||||| ||||||||| | ||||||  |||||| ||||||||||||| ||||| |||||||||    
T  5871834 aaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt 5871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 6656011 - 6656044
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  6656011 aagctaatttcttgtaactcatttgtatctcttt 6656044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 24969167 - 24969200
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  24969167 aagctaatttcttgtaactcatttgtatctcttt 24969200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 26364291 - 26364324
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  26364291 aagctaatttcttgtaactcatttgtatctcttt 26364324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 35662496 - 35662529
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  35662496 aagctaatttcttgtaactcatttgtatctcttt 35662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 45687338 - 45687267
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 87  Q
    ||||||||| ||| ||||||| ||||||||| | |||||| |  ||||||||||||| |||||||||||||||    
T  45687338 gaaaatgggaagaaattaggttttgttcttt-gtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 46147504 - 46147471
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  46147504 aagctaatttcttgtaactcatttgtatctcttt 46147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 48893751 - 48893718
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  48893751 aagctaatttcttgtaactcatttgtatctcttt 48893718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 50673960 - 50673927
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  50673960 aagctaatttcttgtaactcatttgtatctcttt 50673927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 31056191 - 31055953
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  31056191 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgct 31056092  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||||||| |||||||||||| ||||||||  ||  || ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  31056091 ctctcccctagattaggtcatattgaaccgaactaggtcaacaatctttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatg 31055992  T
Q  214 cttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  31055991 cttgtggtgttgctctacacttagatttaggtctgtttt 31055953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 33118283 - 33118047
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||| ||  ||||| ||||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||    
T  33118283 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgct 33118184  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  | | ||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  33118183 ctctcccccaaattaggtcatattggaccgaactgagccaacaatcttggtgtgtttgttcctttctttcattgcttatctttattactttgattatgct 33118084  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  33118083 tgtggtgttgctctacacttagatttaggtctgtttt 33118047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 10445394 - 10445630
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||||||||||||||  | | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  10445494 ctctcccccagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 10445593  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| || ||||||||||||||||||| ||||||||||    
T  10445594 tgtggttttgctctacacttagatttaggtctgtttt 10445630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 20522367 - 20522144
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||||||  ||||| ||| ||||||||||||||| | |||||| |||||||||| ||||||||||||||  ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20522267 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatgct 20522168  T
Q  216 tgtagtgttgctctacacttagat 239  Q
    ||| ||||||||||||||||||||    
T  20522167 tgtggtgttgctctacacttagat 20522144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 39483078 - 39482842
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| |||||||||||||| |||||    
T  39483078 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgct 39482979  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| | | |||||||||||||||||||||  ||  || |||||||||||||||||||| |||||||||| |||||| |||||||||| |||||||    
T  39482978 ctctcccccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcctctctttcattgtttatctttattgctttggttatgct 39482879  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||| ||||||||||||||| ||||||||||    
T  39482878 tgtggtgttgttctacacttagatttaggtctgtttt 39482842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 33528576 - 33528807
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||||||||     ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||  ||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt-----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 33528670  T
Q  118 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||  || | | |||||||||||||||||||||| || | || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33528671 ctctttcccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgct 33528770  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||| |||||| | ||||||||||    
T  33528771 tgtggtgttgctctacatttagatctaggtctgtttt 33528807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 17865350 - 17865114
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||||| |||| ||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||  ||||    
T  17865350 aaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 17865251  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| ||||||||||| ||| |||||| || | || |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  17865250 ctctcccccagattaggtcatattcgactgaactgggtcaacaatcttggtgtgattgttcctttctttcattgattatctttattgctttgattatgct 17865151  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||| ||||||    
T  17865150 tgtggtgttgctctacacttagatctaggtatgtttt 17865114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 34682284 - 34682520
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||| ||  ||| | ||||||||||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  34682284 aaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 34682383  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| || ||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||| | ||||  ||||||||||||    
T  34682384 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatatttatttgtttgattatgct 34682483  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  34682484 tgtggtgttgctctacacttagatttaggtctgtttt 34682520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 8040209 - 8039971
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactca--tttgtatcactttcatcttagtggattggaggactg 115  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||||   |||||| |||||||||| |||||||||||||  |||    
T  8040209 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctg 8040110  T
Q  116 ctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||||||||  ||| ||||||||||||||| |||||| || | || ||||| ||| ||| ||||| || |||||||||||||| ||||||||||||||||    
T  8040109 ctctctcccccagattaggtcatattggactgaactgggtcaacaatcttgatgtattttttcctctccttcattgcttatctttattgctttgattatg 8040010  T
Q  214 cttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  8040009 cttgtggtgttgctctacacttagatttaggtctgtttt 8039971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 2869643 - 2869875
Alignment:
Q  18 aaaatgggtagagattaggtctt-gttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| ||||||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  || |    
T  2869643 aaaatgggtagaaattaggtttttgttcttt-gtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctac 2869741  T
Q  117 tctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttc-ctttctttcattgcttatctatattgctttgattatg 213  Q
    ||||| |||||||||||||||||||||||||||||| ||  || || ||||||||||||||| ||| ||||  |||||||||| | ||||||||| ||||    
T  2869742 tctctcccctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttctcttcctttatttgcttatctttgttgctttgaatatg 2869841  T
Q  214 cttgtagtgttgctctacacttagatttgggtct 247  Q
    ||| | |||||||||||||||||||||| |||||    
T  2869842 cttatggtgttgctctacacttagatttaggtct 2869875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 21630090 - 21629860
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| ||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  21630090 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 21629991  T
Q  118 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 216  Q
    ||||||| ||| ||||||||||||||| |||||| ||  || |||||||||||||||||||||||||||||||||||||| |||||||||||      ||    
T  21629990 ctctccccagattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttga-----att 21629896  T
Q  217 gtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || ||| |||||||||||||||| | ||||||||||    
T  21629895 gtggtgctgctctacacttagatctaggtctgtttt 21629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 8390100 - 8390331
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| ||| || |||||||||| |||||||||||||  |||||    
T  8390100 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgct 8390199  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| | | |||||||| ||||||||||||| ||  || || ||||||||||||||| |||||||||| |||||||| |  |||||||||||||||    
T  8390200 ctctcccccaaattaggtcattttggaccgaactgggtcaacaattttggtgtgtttgttcatttctttcatcgcttatct-ttgtgctttgattatgct 8390298  T
Q  216 tgtagtgttgctctacacttagatttgggtctg 248  Q
    ||| |||||||||||||||||||| | ||||||    
T  8390299 tgtggtgttgctctacacttagatctaggtctg 8390331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 14698958 - 14699176
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| | |||||||| |||||||||||||| |||||    
T  14698958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgct 14699056  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || |||||||||||||||||||||||||||             |||||||||||||||||    
T  14699057 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc-------------attgctttgattatgct 14699143  T
Q  216 tgtagtgttgctctacacttagatttgggtctg 248  Q
    ||| |||||||||||||||||||||| ||||||    
T  14699144 tgtggtgttgctctacacttagatttaggtctg 14699176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 13569470 - 13569253
Alignment:
Q  23 gggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct- 121  Q
    ||||||| |||||||||||||||| ||  | ||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||||||     
T  13569470 gggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctc 13569371  T
Q  122 ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtag 220  Q
    ||| ||| |||||||||||||||||||||| ||  || || ||||||||||| |||||||||||||||| |||||| |  |||||||||||||||||| |    
T  13569370 ccccagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttattcctttctttcattgattatct-ttgtgctttgattatgcttgtgg 13569272  T
Q  221 tgttgctctacacttagat 239  Q
    |||| ||||| ||||||||    
T  13569271 tgtttctctatacttagat 13569253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 52 - 252
Target Start/End: Original strand, 16940193 - 16940395
Alignment:
Q  52 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaact 150  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||| ||| ||| ||||  ||| || |||||||||||||||| |    
T  16940193 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 16940292  T
Q  151 gagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgt 249  Q
    | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||||| | |||||||    
T  16940293 gggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggtctgt 16940392  T
Q  250 ttt 252  Q
    |||    
T  16940393 ttt 16940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 52 - 252
Target Start/End: Original strand, 17010858 - 17011060
Alignment:
Q  52 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaact 150  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||| ||| ||| ||||  ||| || |||||||||||||||| |    
T  17010858 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 17010957  T
Q  151 gagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgt 249  Q
    | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||||| | |||||||    
T  17010958 gggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggtctgt 17011057  T
Q  250 ttt 252  Q
    |||    
T  17011058 ttt 17011060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 10707205 - 10707424
Alignment:
Q  21 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 120  Q
    ||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||   || ||||    
T  10707205 atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctc 10707304  T
Q  121 t-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 218  Q
    | ||| | | |||||||||||||||||||||| ||  || |||| ||||||||| ||| |||||||| |||||||||| |  |||||||||||||||||     
T  10707305 tcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttattcatttctttctttgcttatct-ttgtgctttgattatgcttgc 10707403  T
Q  219 agtgttgctctacacttagat 239  Q
    |||||||||||||||||||||    
T  10707404 agtgttgctctacacttagat 10707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 40015080 - 40014839
Alignment:
Q  10 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 109  Q
    |||| ||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40015080 gtgacatgaaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattgga 40014981  T
Q  110 ggactgctctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg--ttcctttctttcattgcttatctatattgcttt 206  Q
    ||  || ||||||||| |||||| ||||||||||| | ||||| ||||||||||| || | ||||  |||||||| ||  || ||||||| | |||||||    
T  40014980 gggatgttctctccctcagagtatgtcatattggatctaactgggttaccatctt-gtatatttgttttcctttc-ttggtttcttatct-tgttgcttt 40014884  T
Q  207 gattatgcttgtagtgttgctctacacttagatttgggtctgttt 251  Q
    |||||||||||| ||| || | ||||||||| ||| || ||||||    
T  40014883 gattatgcttgtggtgatgttttacacttagttttaggactgttt 40014839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 34388997 - 34388770
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||        ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  || ||    
T  34388997 aaaatgggtagaaattaggtcttgttcttgtg--------taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctact 34388906  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| ||||||||||||||||||| || ||  || |||| |||||||||||||||||||||| ||| |||||| |  |||||||||| ||||    
T  34388905 ctctcccccagattaggtcatattggaccgaattgggtcaacaatctcggtgtgtttgttcctttctttctttgtttatct-ttgtgctttgattttgct 34388807  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  34388806 tgtggtgttgctctacacttagatctaggtctgtttt 34388770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 23078422 - 23078657
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||| ||||||||||| ||  |||||  |||||| ||||||||||||| ||| || |||||||||| |||||||||||||   || ||    
T  23078422 aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttc 23078520  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttaccatc---ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||||||  | | |||||||||||||| ||||||| || | |||    |||||||||||||||| |||||||||||||||||| | | |||||||||||||    
T  23078521 tctcccccatattaggtcatattggatcgaactgggtcaacattcttttggtgtgtttgttccattctttcattgcttatctttgt-gctttgattatgc 23078619  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| |||||||||||||||||||| | ||| ||||||    
T  23078620 ttgtggtgttgctctacacttagatctaggtatgtttt 23078657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 28259129 - 28259345
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||| |||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  28259129 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 28259227  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| | | |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  |||||    
T  28259228 tctcccccaaattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatgc 28259325  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  28259326 ttgtggtgttgctctacact 28259345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 42039619 - 42039840
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaa-tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| ||||||||||||| || ||  |||||  ||||||| ||||||||||||| || ||| |||||||||| ||||||||| |||  ||||    
T  42039619 aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgc 42039717  T
Q  117 tctctccc-tagagtaggtcatattggaccgaact-gagttaccatc--ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 212  Q
    ||||||||  ||| ||||||||||||||||||||| ||   || |||  |||||||| ||| |||||||||||||||||||||| |  ||||||| ||||    
T  42039718 tctctcccacagattaggtcatattggaccgaactagatcaacaatcttttggtgtgcttgctcctttctttcattgcttatct-ttgtgctttgtttat 42039816  T
Q  213 gcttgtagtgttgctctacactta 236  Q
    |||||| |||||||||||||||||    
T  42039817 gcttgtggtgttgctctacactta 42039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 2838024 - 2838114
Alignment:
Q  62 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||| ||| ||||||||||||||||||||||||||    
T  2838024 ctaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactg 2838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 15903841 - 15903997
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||   ||||||||| | |||||| ||||||| ||||||||||| | ||||||||||||| |||||||||||||||||   | ||    
T  15903841 aaaatgggtagaaattagaatttgttcttt-gtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagattttct 15903938  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 175  Q
    |||||| | |||||||||||||||||| ||||||  |||||||||||||||| ||||||    
T  15903939 ctctccgtcagagtaggtcatattggatcgaactaggttaccatcttggtgtatttgtt 15903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 36757714 - 36757931
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| ||||||| |||||||| ||  |||||  |||||  |||||| |||||| |||| | |||||||||| || ||||||||||  ||| |     
T  36757714 aaatgggtagaaattaggttttgttcttgtgtaagcttgaaagcttttttcttataactc-tttgaaacactttcatcatactggattggagagctgtta 36757812  T
Q  119 tctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    || |||  ||| ||||||||||||||||||| || || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  36757813 tcccccccagattaggtcatattggaccgaattgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 36757911  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  36757912 ttgtggtgttgctctacact 36757931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 35397622 - 35397433
Alignment:
Q  54 cttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctcc-ctaga-gtaggtcatattggaccgaactg 151  Q
    ||||||||||||||| | |||||   ||| |||||||||||||||||||||||| ||  ||||| ||||| | ||| |||||| | |||| |||||||||    
T  35397622 cttttaagctaattt-tcgtaacctctttatatcactttcatcttagtggattgaagagctgctatctcctccagatgtaggttagattgaaccgaactg 35397524  T
Q  152 agttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagattt 241  Q
     || | || | |||||||||||||| | |||||||||||||||| |  |||||||||||||||||||| || ||||||| ||| |||||||    
T  35397523 ggtaaacaatattggtgtgtttgtttccttctttcattgcttatattgattgctttgattatgcttgtggttttgctctgcacatagattt 35397433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 1345533 - 1345652
Alignment:
Q  61 gctaatttcttgtaactcatttgtatcactttcatctt-agtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacc 158  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| ||||   |||||||| ||| |||||||||||||||||||||||||| || | |    
T  1345533 gctaatttcttgcaactcatttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaac 1345632  T
Q  159 a---tcttggtgtgtttgtt 175  Q
    |   ||||||||||||||||    
T  1345633 aatttcttggtgtgtttgtt 1345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 27149263 - 27149402
Alignment:
Q  36 gtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggt 134  Q
    |||||||||||| | ||||||||||| ||||||||||| || | ||||||||||||||||  |||||||||||||  ||||||||| ||| | |||||||    
T  27149263 gtcttgttcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggt 27149361  T
Q  135 catattggaccgaactgagttacca-tcttggtgtgtttgtt 175  Q
    ||||||||||| ||||  ||||||| |||| |||||||||||    
T  27149362 catattggaccaaacttggttaccagtctt-gtgtgtttgtt 27149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 40738926 - 40738773
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcc 177  Q
    ||||| |||||||||| |||||||||||||  |||||||| ||| ||| ||||||||||||| | |||||| || | ||   | |||||||||||||| |    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctccccccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt-c 40738829  T
Q  178 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    || ||||| | |||||||| ||||||||||  | ||||||| |||||||||||||||    
T  40738828 ttcctttc-tagcttatctttattgctttgtatttgcttgtggtgttgctctacact 40738773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 25398641 - 25398517
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25398641 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25398543  T
Q  118 ctct-ccctagagtaggtcatattgg 142  Q
    |||| ||| ||| |||||||||||||    
T  25398542 ctctcccccagattaggtcatattgg 25398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 25403779 - 25403655
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25403779 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25403681  T
Q  118 ctct-ccctagagtaggtcatattgg 142  Q
    |||| ||| ||| |||||||||||||    
T  25403680 ctctcccccagattaggtcatattgg 25403655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 3491896 - 3491791
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  3491896 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 3491798  T
Q  118 ctctccc 124  Q
    |||||||    
T  3491797 ctctccc 3491791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 11151746 - 11151671
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||| | ||||||||| | ||||||  |||||||||||||||||||| |||||||||||||||    
T  11151746 gaaaatgggtagaaattagat-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 11690514 - 11690589
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  11690514 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 25407768 - 25407663
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25407768 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25407670  T
Q  118 ctctccc 124  Q
    |||||||    
T  25407669 ctctccc 25407663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 42362365 - 42362440
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  42362365 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 35215649 - 35215595
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  35215649 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 35215595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 35218026 - 35217972
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  35218026 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 35217972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 723894 - 723824
Alignment:
Q  22 tgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  723894 tgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 14633980 - 14633906
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||| ||||||  ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  14633980 aaaatgggtagaaattagga-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 28770725 - 28770781
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaa 75  Q
    |||||||||||| |||||   ||||||||| | |||||||||||||||||||||||||    
T  28770725 aaaatgggtagaaattagagtttgttcttt-gtgagcttttaagctaatttcttgtaa 28770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 36773617 - 36773650
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  36773617 aagctaatttcttgtaactcatttgtatctcttt 36773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 42452973 - 42453026
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  42452973 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 42453026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 26 - 252
Target Start/End: Complemental strand, 10868 - 10640
Alignment:
Q  26 tagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccc 124  Q
    |||| |||||||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||| |||    
T  10868 tagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccc 10769  T
Q  125 tagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 223  Q
     | | |||||||||||||||||||||| ||  |  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  10768 caaattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgcttgtggtgt 10669  T
Q  224 tgctctacacttagatttgggtctgtttt 252  Q
    |||||||||||||||||| ||||||||||    
T  10668 tgctctacacttagatttaggtctgtttt 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 129; Significance: 8e-67; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 5830 - 5594
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||| ||||| |||| ||||||||||| ||  ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||    
T  5830 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 5731  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5730 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 5631  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||| |||||||||||||| | ||||||||||    
T  5630 tgtggtgtttctctacacttagatctaggtctgtttt 5594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 2639 - 2403
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||| |||||||||| ||  ||||| |||||||||||||| ||| || |||||| |||||||||| |||||||||||||| |||||    
T  2639 aaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgct 2540  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
     ||||||  ||| |||||||||||||| ||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2539 gtctcccccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 2440  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||| ||||||||||||| | ||||||||||    
T  2439 tgtggtgttgttctacacttagatctaggtctgtttt 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 133231 - 133445
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| |||||||||||||||| ||  || ||  ||||||  ||||||||||||| |||||| || ||||||| |||||||||||||  |||||    
T  133231 aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgct 133329  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||| ||| | | |||||||||||| ||| ||||| || | ||   | |||||||||||||||| |||||||||| ||||||| ||||||||||  ||||    
T  133330 ctctcccccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattacttatctttattgctttgtatatg 133428  T
Q  214 cttgtagtgttgctcta 230  Q
    |||||  ||||||||||    
T  133429 cttgtgatgttgctcta 133445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 8e-67; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 26403180 - 26403416
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||| | |||||| |||||| |||||||||| |||||||||||||  |||||    
T  26403180 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgct 26403279  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||||||||||| || | || |||||||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  26403280 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctcgttttcattgcttatctttattgctttgattatgct 26403379  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  26403380 tgtggtgttgctctacacttagatttaggtctgtttt 26403416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 23799527 - 23799763
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||| | | | |||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  23799627 ctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgtt 23799726  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||  | |||||||||||||| | ||||| ||||    
T  23799727 tgtggtacttctctacacttagatctaggtctatttt 23799763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 19752344 - 19752580
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  19752344 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 19752442  T
Q  117 tctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    |||||||| |||| |||||||||||||||||||||  || | || ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  19752443 tctctcccctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcctctctttcattacttatctctattgctttgattatgc 19752542  T
Q  215 ttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    |||| ||||||| |||||||||||||| ||||||||||    
T  19752543 ttgtggtgttgcactacacttagatttaggtctgtttt 19752580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 6127368 - 6127142
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  6127368 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 6127269  T
Q  118 ctc-tccctagagtaggtcatattggaccgaactgagttacca--tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| |||| | | ||||||||||||||||||||||||| | ||    ||| ||||||||||| | ||||||||||||||||| || ||||||||||||||    
T  6127268 ctcttccccaaattaggtcatattggaccgaactgagtcaacaatatttgatgtgtttgttcatctctttcattgcttatctttagtgctttgattatgc 6127169  T
Q  215 ttgtagtgttgctctacacttagattt 241  Q
    |||| ||||||||||||||||| ||||    
T  6127168 ttgtggtgttgctctacacttaaattt 6127142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 5702433 - 5702669
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||| ||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||||  ||||    
T  5702433 aaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgct 5702532  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  | | |||||||||||||||||||||| || | || |||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||    
T  5702533 ctctcccccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttccttcatagcttatctctattgctttaattatgct 5702632  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||| |||||||||||||||| | ||||||||||    
T  5702633 tgtggtgatgctctacacttagatctaggtctgtttt 5702669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 4696557 - 4696782
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||||||||  |  ||||| |||||||||||||||||||||           ||||||| |||||||||||||| |||||    
T  4696557 aaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaactc-----------tttcatcatagtggattggagggctgct 4696645  T
Q  118 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||||  ||| |||||||||||||| ||||||| || | || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  4696646 ctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgtt 4696745  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||||||||||||||  |||||||||    
T  4696746 tgtggtgttgctctacacttagatttatgtctgtttt 4696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 6813830 - 6813611
Alignment:
Q  18 aaaatgggtagaga-ttaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 116  Q
    |||||||||||| | |||||| ||||||||| | ||||||  |||||||||||||||||| | ||||| |||||||||||||| ||||||||||  ||||    
T  6813830 aaaatgggtagaaaattaggttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagctgc 6813732  T
Q  117 tctctccc-tagagtaggtcatattggaccgaactgagttacca-tctt-ggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    |||||||| ||| |||||| |||||||||||||||| |||| || |||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6813731 tctctcccctagtgtaggttatattggaccgaactgggttaacaatctttggtatgtttgttcctttctttcatttcttatctttattgctttgattatg 6813632  T
Q  214 cttgtagtgttgctctacact 234  Q
    |||||  ||||| ||||||||    
T  6813631 cttgtgatgttgttctacact 6813611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 9765849 - 9766006
Alignment:
Q  98 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tc-ttggtgtgtttgttcctttctttcattgcttat 194  Q
    |||||||||||||  ||||||||||||  ||| |||||||||||||||||||||| || | || || |||||||||||||||| ||||||||||||||||    
T  9765849 tagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttcattgcttat 9765948  T
Q  195 ctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    || ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  9765949 ctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtttgtttt 9766006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 4456173 - 4455956
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||| ||||||||||| ||  |||||   ||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| |||| ||||||||||||||| | || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  4456074 tctcccccagattaggccatattggaccgaaccgggtcagcaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 4455976  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  4455975 ttgttgtgttgctctacact 4455956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 9054788 - 9054995
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||| | ||||||||| | | ||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||  |||||    
T  9054788 aaaatgggtagaaattagattttgttcttt-gtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgct 9054886  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||||| | ||||||||||||||||||| |||| ||||  |  || |||||||||||| |   |||||||||  ||||||| ||||||||||||||| ||    
T  9054887 ctctcctccagagtaggtcatattggactgaacagagtaaataatattggtgtgtttgattgcttctttcatgacttatctttattgctttgattatact 9054986  T
Q  216 tgtagtgtt 224  Q
    ||| |||||    
T  9054987 tgtggtgtt 9054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 7412486 - 7412269
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| ||  |||||  ||| || ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca----tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 213  Q
    ||| ||| | | |||||||||||||||||||||| || | ||    || ||||||||||||||| |||||||||||||||||| | || |||||  ||||    
T  7412387 tctcccccatattaggtcatattggaccgaactgggtcaacaattttcatggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtatatg 7412290  T
Q  214 cttgtagtgttgctctacact 234  Q
    ||||| |||||||||||||||    
T  7412289 cttgtggtgttgctctacact 7412269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 28307707 - 28307484
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaag-ctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| ||||| | |||||||||||||||   ||||||||||  ||||||||||||||| ||| ||||| |||| ||||||||||||||||||  |||||    
T  28307707 aaatgtgtagaaagtaggtcttgttctttat-gagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgct 28307609  T
Q  118 ctc-tccctagagtaggtcatattggaccgaactgagttacc-atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||| |||| |||||||||||| ||||||||||||| |||||| ||||||| |||||| || | ||||| | || ||||| | |||||||||| |||||||    
T  28307608 ctcatccccagagtaggtcattttggaccgaactgggttaccaatcttggcgtgtttatttcattcttgc-tttcttatatttattgctttgtttatgct 28307510  T
Q  216 tgtagtgttgctctacacttagattt 241  Q
    ||| ||| || | |||||||||||||    
T  28307509 tgtggtgctgttatacacttagattt 28307484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 3051266 - 3051097
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| |||| || ||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  3051266 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 3051168  T
Q  118 ctctcc-ctagagtaggtcatattggaccgaactgagttac-catc-ttggtgtgtttgttcctttctttc 185  Q
    |||||| | |||| |||| ||||| ||||||| || |||||  ||| ||||||||||||||  ||||||||    
T  3051167 ctctcctccagaggaggttatattagaccgaattgggttactaatctttggtgtgtttgttgttttctttc 3051097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 19175753 - 19175923
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tc 161  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||   |||||||||||  ||| |||||||||||||||||||||  || | ||   |     
T  19175753 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T
Q  162 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    || |||||||||||||||||||||||||||||||| |  ||||||| |||||||||| |||||||||||||||    
T  19175852 tttgtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctctacact 19175923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 31071180 - 31071398
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  31071180 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 31071278  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagttacca----tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 212  Q
    |||| ||| ||| |||||||||||||||||||||  || | ||    | |||||||||||||| ||| ||||| ||||||||||   ||||||||  | |    
T  31071279 ctctcccccagattaggtcatattggaccgaactcggtcaacaatctttttggtgtgtttgtt-cttcctttc-ttgcttatcttggttgctttgtattt 31071376  T
Q  213 gcttgtagtgttgctctacact 234  Q
    |||||| |||||||||||||||    
T  31071377 gcttgtggtgttgctctacact 31071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 5990539 - 5990742
Alignment:
Q  46 tttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggac 144  Q
    |||| ||||||||||||||||||||||||||   ||||||||||||||||||||||  |||||||  | ||||||| ||| | | || ||||||||||||    
T  5990539 tttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccgctctctcccccacaatatgtcatattggac 5990637  T
Q  145 cgaactgagttacc-atcttggtgtgtttg--ttcctttctttcattgcttatctatattgc-tttgattatgcttgtagtgttgctctacacttagatt 240  Q
    | ||||  |||||| |||||| |||| |||  || | ||||| | |||||||||| | |||| ||||| ||||||||| || ||| ||||||||||||||    
T  5990638 caaact-tgttaccaatcttgttgtgcttgtttttcattcttgc-ttgcttatctttgttgcttttgaatatgcttgtggttttgttctacacttagatt 5990735  T
Q  241 tgggtct 247  Q
    | |||||    
T  5990736 taggtct 5990742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 30291619 - 30291695
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||    
T  30291619 gaaaatgggtagaaattaggttttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 7493130 - 7493212
Alignment:
Q  24 ggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattg 107  Q
    |||||| ||||||| ||||||| | | ||||||||| | ||||||||| |||||  ||||||||||||||||||||||||||||    
T  7493130 ggtagaaattaggttttgttctgt-gtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 4162502 - 4162585
Alignment:
Q  9 agtgagatgaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||| |||||||||||||  |||||| ||||||||| |||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  4162502 agtgagaggaaaatgggtagaagttaggt-ttgttcttt-gagaacttgttgaagctaatttcttgtaactcatttgtatctcttt 4162585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 1261953 - 1262029
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattgg 142  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||||    
T  1261953 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 1262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 18141833 - 18141908
Alignment:
Q  16 tgaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    |||||||||||||| |||||||  |||||||| | |||||| |  |||||||||||||||||| |||||||||||||||    
T  18141833 tgaaaatgggtagaaattaggt--tgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 1292618 - 1292543
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| |||| || ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  1292618 gaaaatgggtagaaattaagt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 3303825 - 3303750
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||| |||| || ||||||||| | ||||||  |||| |||||||||||||||||||||||||| ||||    
T  3303825 gaaaatgggtagaaattaagt-ttgttcttt-gtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 3772244 - 3772274
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtat 86  Q
    |||||||||||||||||||||||||||||||    
T  3772244 tttaagctaatttcttgtaactcatttgtat 3772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 43079874 - 43079928
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  43079874 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 43079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 43082245 - 43082299
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  43082245 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 43082299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 10015136 - 10015169
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  10015136 aagctaatttcttgtaactcatttgtatctcttt 10015169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 11384040 - 11384073
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  11384040 aagctaatttcttgtaactcatttgtatctcttt 11384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 28283283 - 28283230
Alignment:
Q  98 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 151  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  28283283 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 28283230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 6598985 - 6599054
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtat 86  Q
    ||||||||||||| |||| || ||||||||| | ||||||  |||||||||||||||||||| |||||||||    
T  6598985 gaaaatgggtagaaattaagt-ttgttcttt-gcgagcttgtttaagctaatttcttgtaacccatttgtat 6599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 6674438 - 6674507
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtat 86  Q
    ||||||||||||| |||| || ||||||||| | ||||||  |||||||||||||||||||| |||||||||    
T  6674438 gaaaatgggtagaaattaagt-ttgttcttt-gcgagcttgtttaagctaatttcttgtaacccatttgtat 6674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 18106191 - 18106163
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatc 87  Q
    |||||||||||||||||||||||||||||    
T  18106191 aagctaatttcttgtaactcatttgtatc 18106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 40328792 - 40328857
Alignment:
Q  17 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcattt 82  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||| |||||||||||||||||||||    
T  40328792 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaaactaatttcttgtaactcattt 40328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 41364963 - 41364927
Alignment:
Q  56 tttaagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  41364963 tttaagctaatttcttgtaacacatttgtatcccttt 41364927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 17410 - 17174
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    ||||| |||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| || |||||||||||  ||||    
T  17410 aaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgct 17311  T
Q  118 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    ||||  || | | |||||||||||| ||||||||| || | || | |||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||    
T  17310 ctctttcccatattaggtcatattgaaccgaactgggtcaacaattttggtgtgtttgctcctttctttcatttcttatctttattgctttaattatgct 17211  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttt 252  Q
    ||| ||||||||||| |||||||||| ||| ||||||    
T  17210 tgtggtgttgctctatacttagatttaggtatgtttt 17174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 18116 - 18083
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  18116 aagctaatttcttgtaactcatttgtatctcttt 18083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 85829 - 85594
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 117  Q
    |||||||||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||  | |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  118 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 215  Q
    |||| ||| ||| ||||||||||||||| |||||| ||  || |||| | ||||||||||| ||||||||||||||||||| |  ||||||| |||||||    
T  85730 ctctcccccagattaggtcatattggactgaactgggtcaacaatctagatgtgtttgttcttttctttcattgcttatct-ttgtgctttggttatgct 85632  T
Q  216 tgtagtgttgctctacacttagatttgggtctgtttta 253  Q
    |||  ||||||||||||||||||| | |||||||||||    
T  85631 tgtgatgttgctctacacttagatctaggtctgtttta 85594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 43913 - 44129
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| |||||||||||||||| |   |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  43913 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44011  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||| ||| ||| |||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||| ||||||    
T  44012 tctcccccagaatagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtttatgc 44109  T
Q  215 ttgtagtgttgctctacact 234  Q
    |||| |||||||||||||||    
T  44110 ttgtggtgttgctctacact 44129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 36784 - 37000
Alignment:
Q  19 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 118  Q
    ||||||||||| || | ||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||| |||| |  ||||||    
T  36784 aaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtgggttggcgagctgctc 36882  T
Q  119 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 214  Q
    ||| ||||||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||| ||||||||||| |  ||||||| |||| |    
T  36883 tcttccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttcttttattgcttatct-ttgtgctttgtttatac 36981  T
Q  215 ttgtagtgttgctctacac 233  Q
    |||| |||||| |||||||    
T  36982 ttgtggtgttggtctacac 37000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 8376 - 8588
Alignment:
Q  25 gtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-c 122  Q
    ||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  ||||||||| |    
T  8376 gtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 8474  T
Q  123 cctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgta 219  Q
    || ||| |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| ||||| |||| |||| |||||     
T  8475 cccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttattgttttggttatacttgtg 8573  T
Q  220 gtgttgctctacact 234  Q
    |||||||||||||||    
T  8574 gtgttgctctacact 8588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 23681 - 23455
Alignment:
Q  15 atgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactca----tttgtatcactttcatcttagtggattggag 110  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||| ||||  |||||||||||| | |    ||||||||||||||||||||||| ||||||     
T  23681 atgaaaatgggtagaaattagatcttgtt-ttttgtgagcttctaagaaaatttcttgtaattaacctatttgtatcactttcatcttagtgaattggat 23583  T
Q  111 gactgctctctccc-tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttga 208  Q
      || || |||||| || |||||||||||||||||||||||  |||||||||||||| |||||| || ||||||| | || ||||||| | ||||||| |    
T  23582 agcttctttctcccctaaagtaggtcatattggaccgaactaggttaccatcttggt-tgtttgttttctttcttgc-tttcttatct-tgttgctttaa 23486  T
Q  209 t--tatgcttgtagtgttgctctacacttag 237  Q
    |  ||||||||| |||||||| |||||||||    
T  23485 ttatatgcttgtggtgttgctttacacttag 23455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 43338 - 43274
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggac 144  Q
    |||||||||||||||||||||||||| ||| | || ||||||| |||||||||||||||||||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 43274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 234
Target Start/End: Complemental strand, 45329 - 45182
Alignment:
Q  89 ctttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttcttt 184  Q
    |||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||| |||||||||||| | ||   | |||||||||||||| | ||||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatcttttggtgtgtttgtt-cattcttt 45231  T
Q  185 cattgcttatctatattgctttgattatgcttgtagtgttgctctacact 234  Q
    |||||||||||| | || |||||  |||| |||| |||||||||||||||    
T  45230 cattgcttatctttgtt-ctttgtatatgtttgtggtgttgctctacact 45182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 29506 - 29570
Alignment:
Q  81 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggac 144  Q
    |||||||||||||||||||||||||| ||| | || ||||||| |||||||||||||||||||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 29570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 102445 - 102516
Alignment:
Q  18 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcact 90  Q
    |||||||||||| ||||||  ||||| ||||| ||||||||||| ||||||||||||||   |||||||||||    
T  102445 aaaatgggtagaaattagggtttgtt-ttttgtgagcttttaagataatttcttgtaacctctttgtatcact 102516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 266 - 320
Alignment:
Q  98 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  266 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 17951 - 18008
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc 124  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||||||    
T  17951 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 18008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 24044 - 24101
Alignment:
Q  66 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc 124  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||||||    
T  24044 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 24101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 6424 - 6481
Alignment:
Q  98 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagt 154  Q
    |||||||| ||||| ||||||||||||  ||| ||||||| |||||||||||||||||    
T  6424 tagtggatcggagggctgctctctcccccagactaggtcagattggaccgaactgagt 6481  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 11612 - 11645
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  11612 aagctaatttcttgtaactcatttgtatctcttt 11645  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 27556 - 27523
Alignment:
Q  59 aagctaatttcttgtaactcatttgtatcacttt 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  27556 aagctaatttcttgtaactcatttgtatctcttt 27523  T

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