View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16630_low_47 (Length: 240)
Name: NF16630_low_47
Description: NF16630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16630_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 8793089 - 8793320
Alignment:
| Q |
1 |
gctctatcattcgctcacttttataaaattcgatgacaaatccattgaagatcatgatcaattccttcacttttgtcgctccgtggaagcagtcacactc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8793089 |
gctctatcattcgctcacttttataaaattcgatgacaaatccattgaagatcatgaccaattccttcacttttgtcgctccgtggaagcagtcacactc |
8793188 |
T |
|
| Q |
101 |
tcaccgcacgttcaacaaaaacccatcaaaatgttttaccttagatgtggtcgttatggaaattggcacattccacctattgatgtatggatcgaagcaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8793189 |
tcaccgcacgttcaacaaaaacccatcaaaaagttttaccttagatgtggtcgttatggaaattggcacattccacctattgatgtatggatcgaagcaa |
8793288 |
T |
|
| Q |
201 |
taaatcagcgtggagtcgactatattcatctc |
232 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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|
| T |
8793289 |
taaatcagcgtggagtcgactatattcatctc |
8793320 |
T |
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