View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16630_low_55 (Length: 211)
Name: NF16630_low_55
Description: NF16630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16630_low_55 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 36544308 - 36544491
Alignment:
| Q |
16 |
caaattcctctcacaaaccccaccttcaaacccccacaaattttcccatttcaccacacaattccctctccaaaacaacaactttccttcccaaccaatt |
115 |
Q |
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| T |
36544308 |
caaattcctctcacaaaccccaccttcaaacccccacaaattttcccatttcaccacacaattccctctccaaaacaacaactttccttcccaaccaatt |
36544407 |
T |
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| Q |
116 |
cccttaaagggtcaggttatttatccgaaataagcaaagcaatcgattacgaagaacagtaccgagttgcgaaatcacaggttc |
199 |
Q |
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| T |
36544408 |
cccttaaagggtcaggttatttatccgaaataagcaaagcaatcgattacgaagaacagtaccgagttgcgaaatcacaggttc |
36544491 |
T |
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