View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16631_low_2 (Length: 640)
Name: NF16631_low_2
Description: NF16631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16631_low_2 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 5074715 - 5074424
Alignment:
| Q |
11 |
catcatatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatga |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| || |||||||||| |||||||| |||||||||||||||||||| || |||||||||||||| |
|
|
| T |
5074715 |
catcatatttcacagggaacaaaagttgttgagggattggctttgaagttgccaagagaaaatgcaaaatgttttagtactaaagcatttaagaagatgg |
5074616 |
T |
|
| Q |
111 |
caagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttccttt |
210 |
Q |
| |
|
|| ||| ||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
5074615 |
aaaaacttcgattgcttcaacttgctggtgtacaacttgatggggattttgaacatctttcaagaaatttgagatggctttcatggaatggatttccttt |
5074516 |
T |
|
| Q |
211 |
aacatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaagagacccagg |
302 |
Q |
| |
|
||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| || ||||||||| |
|
|
| T |
5074515 |
aacatgcattccttcaagcttttatcaaggaaatttagtttccattgagttagtaaacagcaatatcaaacttgtgtggaaaaagacccagg |
5074424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 24 - 274
Target Start/End: Original strand, 5175928 - 5176178
Alignment:
| Q |
24 |
agggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagatt |
123 |
Q |
| |
|
|||||||||||| ||| |||||| ||||||||||||| |||||||||| ||| ||||||| |||||| || ||||| |||| |||| | |||||| || |
|
|
| T |
5175928 |
agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaagaaactcaggtt |
5176027 |
T |
|
| Q |
124 |
gcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacct |
223 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||| |
|
|
| T |
5176028 |
gcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggctttcttggaatggatttcctttatcatgcattcct |
5176127 |
T |
|
| Q |
224 |
acaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5176128 |
tcaagcttttatcaaggaaatttagtttccatcgagttagaaaacagcaat |
5176178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 24 - 274
Target Start/End: Original strand, 5277755 - 5278005
Alignment:
| Q |
24 |
agggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagatt |
123 |
Q |
| |
|
|||||||||||| ||| |||||| ||||||||||||| |||||||||| ||| ||||||| |||||| || ||||| |||| |||| | |||||| || |
|
|
| T |
5277755 |
agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaagaaactcagttt |
5277854 |
T |
|
| Q |
124 |
gcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacct |
223 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||| |
|
|
| T |
5277855 |
gcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggctttcttggaatggatttcctttatcatgcattcct |
5277954 |
T |
|
| Q |
224 |
acaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5277955 |
tcaagcttttatcaaggaaatttagtttccatcgagttagaaaacagcaat |
5278005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 24 - 302
Target Start/End: Original strand, 5432474 - 5432752
Alignment:
| Q |
24 |
agggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagatt |
123 |
Q |
| |
|
|||||||||||| | | |||||| ||||||||||||| |||||||||| ||||||||||| |||||| | ||||||||||||||| | ||||||||| |
|
|
| T |
5432474 |
agggaacaaaagctattgagggattgactttgaagttgccaagagatagtgcaaaatgttatagtactgttgcatttaagaagatgaagaaactcagatt |
5432573 |
T |
|
| Q |
124 |
gcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacct |
223 |
Q |
| |
|
|||| |||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| |
|
|
| T |
5432574 |
gcttgaacttgctggtgtgcagcttgatgggaattttgaacatctttcaagaaatctgagatggctttcttggaatggatttccgttatcatgcatacct |
5432673 |
T |
|
| Q |
224 |
acaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaagagacccagg |
302 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||| |||||||||||||| ||| ||| || ||||| |||||||||||| |
|
|
| T |
5432674 |
acaaacttttatcaagcaaatttagtttccatcgagttagaaaacagtaatgtcaaagatttgtggaaagagacccagg |
5432752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 11 - 278
Target Start/End: Complemental strand, 5147898 - 5147631
Alignment:
| Q |
11 |
catcatatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatga |
110 |
Q |
| |
|
|||| |||||| |||||||||||||||| |||| || ||||||||| |||| | || | |||||||||||||||| || ||||||||||||||| |
|
|
| T |
5147898 |
catcgtatttcgtagggaacaaaagttgttgaggcgctagttttgaagttgccaatatctagttcaaaatgttttagtactaaagcatttaagaagatga |
5147799 |
T |
|
| Q |
111 |
caagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttccttt |
210 |
Q |
| |
|
||||||| ||||||||||||||| |||| || ||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||| | |
|
|
| T |
5147798 |
caagactgagattgcttcaacttactggagtacaacttgatggggattttgaatacatttcgagaaatctgagatggctttcttggaatggatttcctct |
5147699 |
T |
|
| Q |
211 |
aacatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatca |
278 |
Q |
| |
|
||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5147698 |
aacatgcatacccacaagcttttatctaggaaatttagtttccattgagttagaaaatagcaatatca |
5147631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 12 - 294
Target Start/End: Original strand, 5396111 - 5396393
Alignment:
| Q |
12 |
atcatatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgac |
111 |
Q |
| |
|
||||||||||| |||||||||||| ||| |||||||| ||||||| || |||| | ||| |||||| ||||||||| || |||| |||||||||| |
|
|
| T |
5396111 |
atcatatttcatagggaacaaaagctgttgagggactagctttgaaattgccaacaacagatgaaaaatgctttagtaccaaagcattcaagaagatgaa |
5396210 |
T |
|
| Q |
112 |
aagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttccttta |
211 |
Q |
| |
|
|| ||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
5396211 |
aaaactcagactgcttcaacttgctggtttacaacttgatggtgattttgaatatctttcaagaaatgtgagatggctttcttggaatgcatttccttta |
5396310 |
T |
|
| Q |
212 |
acatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaaga |
294 |
Q |
| |
|
| || ||| ||| ||||||||||||| || |||||||||||||||||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
5396311 |
aaatgcattccttcaagcttttatcaggggaatttagtttccattgagttagtaaacagcaatgtcaaacatgtgtgggaaga |
5396393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 5691101 - 5690849
Alignment:
| Q |
18 |
tttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagact |
117 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| ||||||||| ||||||| ||||| | ||||||||| ||| ||| ||||| |||||||| || ||| |
|
|
| T |
5691101 |
tttcatagggaacaaaagttg---agggactgagtttgaagttgccaagagctaatgtacaatgttttaatactgaagcatttgagaagatggaaaaact |
5691005 |
T |
|
| Q |
118 |
cagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatcc |
217 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||| |||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
5691004 |
gagattgtttcaacttgctggagtagaacttgatgggaattttgataaactttcaaaaaatctgagatggttttcttgggatggatttcctttaacatcc |
5690905 |
T |
|
| Q |
218 |
atacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaa |
273 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5690904 |
atcccttcaagcttttatcaaggaaatttagtttcccttgagttagaaaacagcaa |
5690849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 5095095 - 5095351
Alignment:
| Q |
18 |
tttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagact |
117 |
Q |
| |
|
||||| |||||||||||| | | |||| |||||||||||||| ||||||| |||| ||||||||||||||| || |||| ||||||||||| ||||| |
|
|
| T |
5095095 |
tttcaaagggaacaaaagctattaaggggctgactttgaagttcccaagagccaatgaaaaatgttttagtactaaagcattcaagaagatgacgagact |
5095194 |
T |
|
| Q |
118 |
cagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatcc |
217 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| | ||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
5095195 |
cagattgcttcaacttgctggggttaaacttgatggagattttgaatatctttcgagaaatctgagatggctgtcttggaatggattttctttaacacat |
5095294 |
T |
|
| Q |
218 |
atacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
|||||||||| |||||| |||||| || |||||||| |||||||| || |||||| |
|
|
| T |
5095295 |
atacctacaaacttttacaaaggaagcttggtttccatcgagttagagaatagcaat |
5095351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 11 - 274
Target Start/End: Complemental strand, 5182881 - 5182618
Alignment:
| Q |
11 |
catcatatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatga |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||| | ||||||| || |||| || |||| |||||| ||||||||| || |||| ||| |||||| |
|
|
| T |
5182881 |
catcatatttcacagggaacaaaagctgttgagggattagctttgaaattgccaacagcaaatggaaaatgctttagtaccaaagcattcaaggagatga |
5182782 |
T |
|
| Q |
111 |
caagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttccttt |
210 |
Q |
| |
|
|| ||| ||| |||||||||||||| | || |||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5182781 |
aaaaacttagactgcttcaacttgctagtgtacaacttgagggggactttgaatatctttcaagaaatctgatatggctttcttggaatggatttccttt |
5182682 |
T |
|
| Q |
211 |
aacatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
| || ||| ||| | || |||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
5182681 |
gaaatgcattccttcgagtttttatcaagaaaatttagtttccattgagttagtaaacagcaat |
5182618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 42 - 264
Target Start/End: Original strand, 5349327 - 5349549
Alignment:
| Q |
42 |
agggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggt |
141 |
Q |
| |
|
|||| ||| |||||||||| ||||||| ||||| ||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5349327 |
aggggctggctttgaagttgccaagagctaatgaaaaatgttttagtactaaagcattcaagaagatgaagagactcagattgcttcaacttgctggggt |
5349426 |
T |
|
| Q |
142 |
gcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaagga |
241 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| | |||| || |||||| ||| ||||||| || | |
|
|
| T |
5349427 |
aaaacttgatggagattttgaatatctttcaaaaaatctgagatggctttcttggaacggatgttgtttaccacatatacctgcaaacttttatagagaa |
5349526 |
T |
|
| Q |
242 |
aatttagtttccattgagttaga |
264 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
5349527 |
aatttagtttccatcgagttaga |
5349549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 42 - 264
Target Start/End: Original strand, 5424703 - 5424925
Alignment:
| Q |
42 |
agggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggt |
141 |
Q |
| |
|
|||| ||| |||||||||| ||||||| ||||| ||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5424703 |
aggggctggctttgaagttgccaagagctaatgaaaaatgttttagtactaaagcattcaagaagatgacgagactcagattgcttcaacttgctggggt |
5424802 |
T |
|
| Q |
142 |
gcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaagga |
241 |
Q |
| |
|
||||| |||| | |||| |||||||||| | ||||||||||||||| ||||||||||||| | ||||| || |||||||||| ||||||| || | |
|
|
| T |
5424803 |
aaaacttaatggagattttaaatatctttcgagaaatctgagatggctgtcttggaatggatgttctttaccacatatacctacaaacttttatagagaa |
5424902 |
T |
|
| Q |
242 |
aatttagtttccattgagttaga |
264 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
5424903 |
catttagtttccatcgagttaga |
5424925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 5382669 - 5382924
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||||| |||||||||||| ||| ||||| || ||||||||||||||| | || | |||||||||||| || ||||||||||||||||| ||| |
|
|
| T |
5382669 |
atatttcatagggaacaaaagctgttgagggtctagctttgaagttaccaataactagttcaaaatgttttaacactaaaacatttaagaagatggaaag |
5382768 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
||| |||||||||||||||||||| || ||||||||||| | ||| | ||||||||| ||| || ||||| || | |||||| |||||||||||| || |
|
|
| T |
5382769 |
actaagattgcttcaacttgctggagtacaacttgatggagatttcaagtatctttcaggaaaactaagatgactgtgttggaaaggatttcctttatca |
5382868 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacag |
270 |
Q |
| |
|
| ||||||| ||| ||||| |||| |||||||||||||||| |||||||||||||| |
|
|
| T |
5382869 |
ttcataccttcaaacttttgtcaaagaaatttagtttccatagagttagaaaacag |
5382924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 42 - 274
Target Start/End: Complemental strand, 5355601 - 5355369
Alignment:
| Q |
42 |
agggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggt |
141 |
Q |
| |
|
||||| || |||||||||| ||||||| | ||||||||||||||||||| || ||||||||||||||| ||||| | |||||||| ||||||||| || |
|
|
| T |
5355601 |
agggattggctttgaagttgccaagagttgatgcaaaatgttttagtactaaagcatttaagaagatgaagagactgaaattgcttctacttgctggagt |
5355502 |
T |
|
| Q |
142 |
gcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaagga |
241 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||||||| ||||| |||| | ||| || |||| |
|
|
| T |
5355501 |
aaaacttgatggaaattttgaatgtctttcaagaaatctgaggtggctgtcttggaatgaatttcctttaacacatataccaacaaacctttttctagga |
5355402 |
T |
|
| Q |
242 |
aatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
|||||||||||||| |||||||| || |||||| |
|
|
| T |
5355401 |
aatttagtttccatagagttagagaatagcaat |
5355369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 5342697 - 5342945
Alignment:
| Q |
24 |
agggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagatt |
123 |
Q |
| |
|
|||||||| ||| ||| ||||||||| |||||||||| | || || | ||||||| ||||||| || || ||||| | ||||||| | ||| ||||| |
|
|
| T |
5342697 |
agggaacacaagctgttgagggactggctttgaagttgctaaaaggtgatgcaaatcgttttagaactaaagcatttgaaaagatgaataaactaagatt |
5342796 |
T |
|
| Q |
124 |
gcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacct |
223 |
Q |
| |
|
|||||||||| |||| || ||||||||||| | |||||| |||||||| | ||| || |||||||| | |||||||||||||||||||| || ||||||| |
|
|
| T |
5342797 |
gcttcaactttctggcgtacaacttgatggagattttgactatctttctagaaaactaagatggctatgttggaatggatttcctttaagatgcatacct |
5342896 |
T |
|
| Q |
224 |
acaagcttttatcaaggaaatttagtttccattgagttagaaaacagca |
272 |
Q |
| |
|
| || |||| |||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
5342897 |
aaaaactttgatcaaggaaatttagtttccatggagtttgaaaacagca |
5342945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 42 - 274
Target Start/End: Complemental strand, 5068125 - 5067893
Alignment:
| Q |
42 |
agggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggt |
141 |
Q |
| |
|
|||| ||| |||||||||| |||||| ||||| ||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5068125 |
aggggctggctttgaagttgccaagatctaatgaaaaatgttttagtactaaagcattcaagaagatgaagagactcagattgcttcaacttgctggggt |
5068026 |
T |
|
| Q |
142 |
gcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaagga |
241 |
Q |
| |
|
| |||||||| | ||||||||||||||| | |||||||| |||||| ||||||||||||| | |||| || |||||| || ||||||| || | |
|
|
| T |
5068025 |
aaaccttgatggagattttgaatatctttcgagaaatctgatatggctgtcttggaatggatgttgtttaccacatatacctgaaaacttttatagagaa |
5067926 |
T |
|
| Q |
242 |
aatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
|||||||||||||| |||||||| || |||||| |
|
|
| T |
5067925 |
aatttagtttccatcgagttagagaatagcaat |
5067893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 42 - 278
Target Start/End: Complemental strand, 5158475 - 5158239
Alignment:
| Q |
42 |
agggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggt |
141 |
Q |
| |
|
|||| ||| |||||||||| | ||||| ||||| ||||||||| ||||| || |||| |||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
5158475 |
aggggctggctttgaagttgcaaagagctaatgaaaaatgtttcagtactaaagcattcaagaagatgaagagacttagattgcttcaacttgctggggt |
5158376 |
T |
|
| Q |
142 |
gcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaagga |
241 |
Q |
| |
|
|||||| ||| | |||| ||||| |||| | || |||||||||||| ||||||||| ||||| ||| |||| |||||||||| ||||||| || | |
|
|
| T |
5158375 |
caaacttgttggagattttaaatatatttcgagaagtctgagatggctgtcttggaatagattttcttcaacacatatacctacaaacttttatatagaa |
5158276 |
T |
|
| Q |
242 |
aatttagtttccattgagttagaaaacagcaatatca |
278 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||| |
|
|
| T |
5158275 |
aatttagtttccatcgagttagagaatagcaatatca |
5158239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 18 - 279
Target Start/End: Complemental strand, 5103902 - 5103641
Alignment:
| Q |
18 |
tttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagact |
117 |
Q |
| |
|
||||| |||||||||||| | | |||||||| |||||||||| |||||| |||| ||||||||||||||| || |||| |||||||||| ||||| |
|
|
| T |
5103902 |
tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact |
5103803 |
T |
|
| Q |
118 |
cagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatcc |
217 |
Q |
| |
|
||| ||||||||||| |||| || |||||||||| | ||||||||||||||| | |||||||| || ||| ||||||||||||||| |||||||| |
|
|
| T |
5103802 |
tagactgcttcaactttctggagtaaaacttgatggagattttgaatatctttcgagaaatctgaaattgctgtcttggaatggattttctttaacacat |
5103703 |
T |
|
| Q |
218 |
atacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcag |
279 |
Q |
| |
|
||||||| | |||| || || ||||||||||||||| |||||| | || |||||| |||| |
|
|
| T |
5103702 |
atacctaataactttcatagagaaaatttagtttccatcgagttacagaatagcaatgtcag |
5103641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 51 - 274
Target Start/End: Complemental strand, 5132853 - 5132627
Alignment:
| Q |
51 |
ctttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaa---gactcagattgcttcaacttgctggggtgcaact |
147 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| ||||||| || |||||||| ||||||| | | ||||||||||||||||||| |||||| |||| |
|
|
| T |
5132853 |
ctttgaagttgccaagagctaatgcaaaatgtcttagtactaaagcatttaaggagatgacgacgaggctcagattgcttcaacttgatggggtaaaact |
5132754 |
T |
|
| Q |
148 |
tgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaaggaaattta |
247 |
Q |
| |
|
|||||| | ||||||| ||||||| |||||| |||||| | | |||||||||||||||||||||| ||||||||| |||||| || || |||| |
|
|
| T |
5132753 |
tgatggagattttgaaatcctttcaagaaatctaagatggttgtgttggaatggatttcctttaacacatatacctacagatttttatagagaaagttta |
5132654 |
T |
|
| Q |
248 |
gtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
|||||||| ||||||||||| |||||| |
|
|
| T |
5132653 |
gtttccatcgagttagaaaatagcaat |
5132627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 5369411 - 5369598
Alignment:
| Q |
18 |
tttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagact |
117 |
Q |
| |
|
||||| |||||||||||| | | |||| ||| | |||||||| ||||||| ||||| |||| ||||||| || || |||| |||||||||| | ||| |
|
|
| T |
5369411 |
tttcaaagggaacaaaagctattaaggggctggcgttgaagttgccaagagctaatgaaaaacgttttagcactaaagcattcaagaagatgaacaaact |
5369510 |
T |
|
| Q |
118 |
cagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggattt |
205 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||| | ||||||||||||||| | ||||||||||||||| ||||||||||||||| |
|
|
| T |
5369511 |
cagattgctccaacttgctggggtaaaacttgatggagattttgaatatctttccagaaatctgagatggctgtcttggaatggattt |
5369598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 5261077 - 5260917
Alignment:
| Q |
44 |
ggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggtgc |
143 |
Q |
| |
|
|||||| |||||||||| || | || ||||||||||||||||||||| || ||||| | ||||||| || |||||||||||||||||||||| || |
|
|
| T |
5261077 |
ggactgtctttgaagttgcctaaagctaatgcaaaatgttttagtactaaagcatttgaaaagatgaagagtctcagattgcttcaacttgctgaagtaa |
5260978 |
T |
|
| Q |
144 |
aacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatt |
204 |
Q |
| |
|
|||||||||||| |||||||||| |||||| | || ||||| ||| || ||||||||||| |
|
|
| T |
5260977 |
aacttgatggggattttgaatatgtttcaagagatttgagactgctgtcgtggaatggatt |
5260917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 5446129 - 5446318
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
||||||||||||||| ||||| | | ||||||| ||||||| || || | | ||||||||||||||||||||| || ||||| | ||||||| || |
|
|
| T |
5446129 |
atatttcacagggaaaaaaaggtattttgggactggctttgaaattgcctacaactaatgcaaaatgttttagtactaaagcatttgaaaagatgaagag |
5446228 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatt |
204 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||||||||| | |||||||||| |||| | | |||| | |||||| || ||||||||||| |
|
|
| T |
5446229 |
actcagatttcttcaacttgctgaggtaaaacttgatggagattttgaatatgtttcgagagatctaacatggctgtcatggaatggatt |
5446318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 5285075 - 5284915
Alignment:
| Q |
44 |
ggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggtgc |
143 |
Q |
| |
|
|||||| |||||||||| || | || ||||||||||||||||||||| || ||||| | ||||||| || |||||||||||||||||||| | || |
|
|
| T |
5285075 |
ggactgtctttgaagttgcctaaagctaatgcaaaatgttttagtactaaagcatttgaaaagatgaagagtctcagattgcttcaacttgcagaagtaa |
5284976 |
T |
|
| Q |
144 |
aacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatt |
204 |
Q |
| |
|
|||||||||||| |||||||||| |||||| | || ||||| ||| || ||||||||||| |
|
|
| T |
5284975 |
aacttgatggggattttgaatatgtttcaagagatttgagactgctgtcgtggaatggatt |
5284915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 153; Significance: 9e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 10 - 302
Target Start/End: Complemental strand, 36214833 - 36214541
Alignment:
| Q |
10 |
tcatcatatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatg |
109 |
Q |
| |
|
|||| |||||| | |||||||||||| ||| ||||| || ||||||| || |||||| |||| |||| | |||||||| || |||||||||||||| |
|
|
| T |
36214833 |
tcattatatttaatagggaacaaaagctgttgagggtttggctttgaaattgccaagaacaaatggaaaacgctttagtactaaagcatttaagaagatg |
36214734 |
T |
|
| Q |
110 |
acaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctt |
209 |
Q |
| |
|
| ||||||||||||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
36214733 |
aaaagactcagattgcttcaacttgctggtgtacaacttgatggggactttgagtatctttcaaaaaatttgagatggctttcttggaatggttttcctt |
36214634 |
T |
|
| Q |
210 |
taacatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaagagacccagg |
302 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |
|
|
| T |
36214633 |
taacatgcattccttcaagcttttatcaagaaaatttagtttccattgagttagaaaacagcaatgtcaaacatgtgtgggaagagccccagg |
36214541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 112; Significance: 3e-56; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 15 - 270
Target Start/End: Complemental strand, 9640 - 9385
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||| |||||||||| |||| | || | |||||||||||||| | ||| ||||| |||||||| || |
|
|
| T |
9640 |
atatttcatagggaacaaaagctgttgagggactagctttgaagttgccaataactagttcaaaatgttttagtgctgaatcatttgagaagatggagag |
9541 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
||| |||||||||||||||||||| || ||||||||||| | ||| || |||||||||| ||| || |||||||| | |||||| |||||||||||| || |
|
|
| T |
9540 |
actaagattgcttcaacttgctggagtacaacttgatggagatttcgagtatctttcaagaaaactaagatggctgtgttggaaaggatttcctttacca |
9441 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacag |
270 |
Q |
| |
|
| ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9440 |
ttcataccttcaaacttttatcaaagaaatttagtttccattgagttagaaaacag |
9385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 24 - 296
Target Start/End: Complemental strand, 4125383 - 4125111
Alignment:
| Q |
24 |
agggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagatt |
123 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| | ||| || || |||| || ||||||| |||||| ||||||||||||||| | ||||||||| |
|
|
| T |
4125383 |
agggaacaaaagctgttgagggactgactttgaagctgccaggacgtagtgcacaacgttttagcaccgaagcatttaagaagatgaagaaactcagatt |
4125284 |
T |
|
| Q |
124 |
gcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacct |
223 |
Q |
| |
|
|||||||||| |||| | ||||||||||| | |||| |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
4125283 |
gcttcaactttctggtgcacaacttgatggagattttaaatatctttcaaaacaattgagatggctacactggaatggatttcctttaacatgcatacct |
4125184 |
T |
|
| Q |
224 |
acaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaagaga |
296 |
Q |
| |
|
||| ||| |||||| ||||| | |||||||||||||||||||| |||||| ||| | ||||||| |||||| |
|
|
| T |
4125183 |
tcaaacttctatcaaagaaatattgtttccattgagttagaaaatagcaatgtcaaacttgtgtggaaagaga |
4125111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 4359510 - 4359791
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||| |||| ||||||| | ||| | || |||| || ||||||| ||| |||||||| |||| |||| | |
|
|
| T |
4359510 |
atatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcgtagtgcacaacgttttagcaccaaaacatttgagaacatgaagaa |
4359609 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
|||||||||||| |||||| | || || ||||||||||| | |||| || ||||||||| ||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
4359610 |
actcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatggatttcctttaaca |
4359709 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaatatcagccatgtgtgggaagaga |
296 |
Q |
| |
|
| |||||| ||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||| |
|
|
| T |
4359710 |
tgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttgtgtggaaagaga |
4359791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 4321986 - 4321727
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||||||||||| | ||| | ||| |||| || | |||||||| |||||||| |||| |||| | |
|
|
| T |
4321986 |
atatttcatagggaacaaaagctgttgagggactgactttgaagatgccatgtcatagtgcacaacgatttagtactaaaacatttgagaacatgaagaa |
4321887 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
|||||||||||| |||||| |||| || ||||||||||| | |||| ||||| |||||| |||| | | |||||| ||||||||||||||||||| | |
|
|
| T |
4321886 |
actcagattgctgcaactttctggtgtacaacttgatggagattttaaatatatttcaagaaatttaaaatggctgcactggaatggatttcctttaaga |
4321787 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
| ||||||| ||| ||| |||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4321786 |
tgcataccttcaaacttctatcaaagaaatatagtttccattgagttagaaaacagcaat |
4321727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 4334596 - 4334855
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| ||||||||||| | ||| | || |||| || ||||||||||| || ||||||||||||||| | |
|
|
| T |
4334596 |
atatttcacagggaacaaaaactgttgagggattgactttgaagctgccaggtcgtagtgcacaacgttttagtaccaaagcatttaagaagatgaagaa |
4334695 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||| | |||| |||||||||| | ||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
4334696 |
actcagattgcttcaactttctggcgcacaacttgatggagattttaaatatctttccagaaagttgagatggctgcactggaatggatttcctttaaca |
4334795 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
| ||||||| ||| || |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4334796 |
tgcataccttcaaagttccgtcaaagaaatatagtttccattgagttagaaaacagcaat |
4334855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 4352333 - 4352592
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||||||||| ||| | ||| | || |||| || ||||||||||| || ||||| |||| |||| | |
|
|
| T |
4352333 |
atatttctcagggaacaaaagttgttgaaggactgacttttaagatgccaggtcgtagtgcacaacgttttagtaccaaagcatttgagaacatgaagaa |
4352432 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
|||||||||||| |||||| |||| || ||||||||||| | |||| |||||||||||| |||| ||| |||||| ||||||||||||||||||||| |
|
|
| T |
4352433 |
actcagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttcaagaaatttgaaatggctgcactggaatggatttcctttaaca |
4352532 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
| ||| || ||| ||| |||||| |||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4352533 |
tgtatagcttcaaacttctatcaaagaaatttagtttccgttgtgttagaaaacagcaat |
4352592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 4344054 - 4344311
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
||||||||||||||||||||| ||| || ||||||||||| ||| | ||| | || | || || ||||||||||| || ||||| |||| |||| | |
|
|
| T |
4344054 |
atatttcacagggaacaaaagctgttgaaggactgacttttaagatgccaggtcgtagtacacaacgttttagtaccaaagcatttgagaacatgaagaa |
4344153 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
||| |||||||| |||||| |||| || ||||||||||| | |||| |||||||||||| |||| |||||||||| |||||||||||||| ||| || |
|
|
| T |
4344154 |
acttagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttcaagaaatttgagatggctacactggaatggatttccgttagca |
4344253 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagca |
272 |
Q |
| |
|
| ||||||| ||| ||| |||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
4344254 |
tgcataccttcaaacttctatcaaagaaatatagtttccattgagttagaaaacagca |
4344311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 70 - 278
Target Start/End: Complemental strand, 4134723 - 4134515
Alignment:
| Q |
70 |
taatgcaaaatgttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctt |
169 |
Q |
| |
|
|||||||||||||||||||||| | ||||| |||| |||| | ||| ||||||||||||| | |||| || ||||||||||| | |||| |||||||| |
|
|
| T |
4134723 |
taatgcaaaatgttttagtaccaatgcatttgagaacatgaagaaactgagattgcttcaaccttctggtgtacaacttgatggagattttaaatatctt |
4134624 |
T |
|
| Q |
170 |
tcaaaaaatctgagatggctttcttggaatggatttcctttaacatccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaaca |
269 |
Q |
| |
|
|||| |||| |||||||||| | |||||||| |||||||||||||| || || |||| |||||| ||| ||||||||||||||||| || ||||||||| |
|
|
| T |
4134623 |
tcaagaaatttgagatggctgtgttggaatgaatttcctttaacattgatgcccacaaacttttaccaaagaaatttagtttccattcagctagaaaaca |
4134524 |
T |
|
| Q |
270 |
gcaatatca |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
4134523 |
acaatatca |
4134515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 6533595 - 6533478
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttg |
195 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||| |||||||| |||| | |||| ||| |||||||| | |||| |||||||| | || |
|
|
| T |
6533595 |
catttaagaagatgaataagctcagattgcttcaacttgctggtgtgcaactgaatggagattttaaatgtctttcaagagatcttagatggctgtactg |
6533496 |
T |
|
| Q |
196 |
gaatggatttcctttaac |
213 |
Q |
| |
|
| |||||||||| ||||| |
|
|
| T |
6533495 |
gcatggatttccattaac |
6533478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 6757500 - 6757576
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttca |
172 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||| |||||| || ||| |||| | |||| ||||||||||| |
|
|
| T |
6757500 |
catttaagaagatgaataaactcagattgctacaacttgttggggtacagcttaatggagattttaaatatctttca |
6757576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 6546810 - 6546699
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttg |
195 |
Q |
| |
|
||||||||||||||| | |||||||||||||| ||||| ||||||| | ||| |||| | |||| |||| |||||| || | || || ||||||| || |
|
|
| T |
6546810 |
catttaagaagatgaataaactcagattgcttcgacttggtggggtgaagcttaatggagattttaaatacctttcagaagaacttaggtggctttgctg |
6546711 |
T |
|
| Q |
196 |
gaatggatttcc |
207 |
Q |
| |
|
| |||||||||| |
|
|
| T |
6546710 |
gcatggatttcc |
6546699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 6751960 - 6752058
Alignment:
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaac |
213 |
Q |
| |
|
|||||||||||||||||||||| ||||| || || | || | |||| || ||||||| | |||||| |||||| | | |||| |||||||||| ||||| |
|
|
| T |
6751960 |
actcagattgcttcaacttgcttgggtgaaatttaaaggagattttaaacatctttcgagaaatcttagatggttgtattggcatggatttccgttaac |
6752058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 6835331 - 6835429
Alignment:
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaac |
213 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| | || | |||| || | ||||| | |||||| |||||| | | ||| |||||||||| ||||| |
|
|
| T |
6835331 |
actcagattgcttcaacttgctggggtgaaacttaaaggagattttaaacacctttcgagaaatcttagatggttgtactggcatggatttccattaac |
6835429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 6623340 - 6623223
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttg |
195 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||| | ||||| || ||| |||| | |||| |||| |||||| | | || || ||||||| || |
|
|
| T |
6623340 |
catttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactg |
6623241 |
T |
|
| Q |
196 |
gaatggatttcctttaac |
213 |
Q |
| |
|
| |||||||||| ||||| |
|
|
| T |
6623240 |
gcatggatttccattaac |
6623223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 6714888 - 6714964
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttca |
172 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||||| | ||| | || | |||| ||||||||||| |
|
|
| T |
6714888 |
catttaagaagatgaataaactcagattgcttcgccttgctggggtgaagcttaaaggagattttaaatatctttca |
6714964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 8876914 - 8877173
Alignment:
| Q |
15 |
atatttcacagggaacaaaagttgtcgagggactgactttgaagttaccaagagataatgcaaaatgttttagtaccgaaacatttaagaagatgacaag |
114 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| || || ||||||| |||| |||| |||||||| |||||||||| || ||||||||||||||| || |
|
|
| T |
8876914 |
atatttgacagggaacaaaagttgttgagggtcttgctctgaagttgccaatagatgatgcaaaacgttttagtactaaagcatttaagaagatgaagag |
8877013 |
T |
|
| Q |
115 |
actcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctgagatggctttcttggaatggatttcctttaaca |
214 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| ||||||| |||||| ||||||||||||| | | |||||||||| |||||||||||| |
|
|
| T |
8877014 |
actcagattgcttcaacttgccggcgtacaacttgatggaaactttgaatttctttccaaaaatctgagattgttatcttggaatgcatttcctttaacc |
8877113 |
T |
|
| Q |
215 |
tccatacctacaagcttttatcaaggaaatttagtttccattgagttagaaaacagcaat |
274 |
Q |
| |
|
| ||||||||| ||||||||||| |||||| || || || ||||||||||| |||||| |
|
|
| T |
8877114 |
tgcatacctaccgacttttatcaagaaaatttggtatctatcgagttagaaaatagcaat |
8877173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 22585283 - 22585161
Alignment:
| Q |
82 |
ttttagtaccgaaacatttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttcaaaaaatctg |
181 |
Q |
| |
|
||||||||| || ||||| | ||||||| | |||||||||||||||||||||||| || |||||||||||| ||| |||| |||||| | | || |
|
|
| T |
22585283 |
ttttagtactgactcatttgaaaagatgaaaggactcagattgcttcaacttgctgaagtaaaacttgatggggactttagatatgtttcaagagagttg |
22585184 |
T |
|
| Q |
182 |
agatggctttcttggaatggatt |
204 |
Q |
| |
|
|||| ||| || ||||||||||| |
|
|
| T |
22585183 |
agattgctgtcatggaatggatt |
22585161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 5762 - 5838
Alignment:
| Q |
96 |
catttaagaagatgacaagactcagattgcttcaacttgctggggtgcaacttgatgggggttttgaatatctttca |
172 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||| | ||||| || ||| |||| | |||| |||| |||||| |
|
|
| T |
5762 |
catttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca |
5838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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