View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16631_low_20 (Length: 272)
Name: NF16631_low_20
Description: NF16631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16631_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 4400231 - 4399996
Alignment:
| Q |
20 |
tttaaaacaaaagattgtacattaaaattaacctccatataacttgattggtaaaataaaagatatatcaatattattatttgatgatttgaagaagatt |
119 |
Q |
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| T |
4400231 |
tttaaaacaaaagattgtacattaaaattaacctccatataacttgattggtaaaataaaagatatatcaatattattatttgatgatttgaagaagatt |
4400132 |
T |
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| Q |
120 |
atataagaagaatgaaaatgaaacatgcattataatacttaatactaattagtaacaactattgaacttgaacataaagagtccataaatggatgatcct |
219 |
Q |
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| T |
4400131 |
atataagaagaatgaaaatgaaacatgcattataatacttaatactaattagtaacaactattgaacttgaacataaagagtccataaatggatgatcct |
4400032 |
T |
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| Q |
220 |
aaaataaactaaaacatcaaatattgattatatatt |
255 |
Q |
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| T |
4400031 |
aaaataaactaaaacatcaaatattgattatatatt |
4399996 |
T |
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