View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16631_low_26 (Length: 213)
Name: NF16631_low_26
Description: NF16631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16631_low_26 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1964002 - 1964200
Alignment:
| Q |
1 |
aatgctcttagcctaggaattgtatatactttggtaaggagtctaccttgacacaaatttgagacctgaagttttatacttactagatatagaccagcgt |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1964002 |
aatgctcttagcctaggaattgtctatactttggtaaggagtctaccttgacacaaatttgagacctgaagttttatacttactagatatagaccagcgt |
1964101 |
T |
|
| Q |
101 |
aaagtttgtaccttgaaggttattcataaaaaatgttagttttttcttccagaaacgcatattaccagaagtcgtatgaatggccatcttgatgagaat |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1964102 |
aaagtttgtaccttgaaggttattcataaaaaatgttagttttttcttccagaaacgcatattaccagaagccgtatgaatggccatcttgatgagaat |
1964200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University