View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16632_high_1 (Length: 849)

Name: NF16632_high_1
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16632_high_1
NF16632_high_1
[»] chr8 (35 HSPs)
chr8 (561-839)||(25264760-25265038)
chr8 (561-839)||(33294787-33295066)
chr8 (154-325)||(25264338-25264509)
chr8 (156-323)||(25265797-25265964)
chr8 (154-322)||(33295339-33295506)
chr8 (155-325)||(33293938-33294109)
chr8 (444-508)||(25264643-25264707)
chr8 (154-324)||(39885967-39886137)
chr8 (444-508)||(33295119-33295183)
chr8 (154-296)||(3157956-3158098)
chr8 (155-319)||(39884615-39884779)
chr8 (157-294)||(2552408-2552544)
chr8 (154-213)||(17707450-17707509)
chr8 (155-214)||(22714050-22714109)
chr8 (169-305)||(27166778-27166914)
chr8 (155-213)||(36899897-36899955)
chr8 (316-356)||(25264515-25264555)
chr8 (249-329)||(45447099-45447179)
chr8 (154-213)||(17706163-17706222)
chr8 (157-207)||(15279641-15279691)
chr8 (157-207)||(15460010-15460060)
chr8 (158-296)||(5461936-5462074)
chr8 (316-353)||(33295275-33295312)
chr8 (154-213)||(357975-358034)
chr8 (154-213)||(36901179-36901238)
chr8 (154-211)||(26720252-26720309)
chr8 (155-215)||(1650210-1650270)
chr8 (316-356)||(25265731-25265771)
chr8 (158-214)||(31819051-31819107)
chr8 (156-208)||(31916971-31917023)
chr8 (156-208)||(45448499-45448551)
chr8 (156-215)||(26719385-26719444)
chr8 (238-292)||(31917618-31917672)
chr8 (156-213)||(11761038-11761095)
chr8 (156-213)||(26635510-26635567)
[»] chr1 (69 HSPs)
chr1 (561-841)||(33258281-33258561)
chr1 (561-841)||(33278453-33278733)
chr1 (561-839)||(36146278-36146555)
chr1 (561-839)||(7654621-7654900)
chr1 (561-841)||(28920006-28920287)
chr1 (561-839)||(19056707-19056986)
chr1 (155-356)||(33257880-33258080)
chr1 (155-356)||(33278052-33278252)
chr1 (154-325)||(7655154-7655325)
chr1 (155-323)||(16673148-16673316)
chr1 (154-325)||(28920545-28920716)
chr1 (156-323)||(33259264-33259431)
chr1 (156-323)||(33279423-33279590)
chr1 (154-323)||(36145342-36145511)
chr1 (155-325)||(28919082-28919252)
chr1 (561-784)||(24088702-24088927)
chr1 (156-323)||(7653686-7653853)
chr1 (164-325)||(36146802-36146962)
chr1 (167-323)||(19057759-19057915)
chr1 (227-316)||(16672726-16672815)
chr1 (156-294)||(41668273-41668411)
chr1 (159-296)||(50316969-50317106)
chr1 (245-310)||(1969636-1969701)
chr1 (156-295)||(24438867-24439007)
chr1 (154-296)||(22684069-22684211)
chr1 (444-508)||(19056589-19056653)
chr1 (444-508)||(33258167-33258231)
chr1 (444-508)||(33278339-33278403)
chr1 (154-292)||(19249318-19249455)
chr1 (158-295)||(19251082-19251219)
chr1 (157-215)||(16592022-16592080)
chr1 (444-503)||(28920348-28920407)
chr1 (154-296)||(13211031-13211173)
chr1 (154-297)||(50315316-50315459)
chr1 (154-279)||(33981502-33981627)
chr1 (154-295)||(46652701-46652842)
chr1 (155-270)||(24437073-24437188)
chr1 (448-508)||(36146607-36146664)
chr1 (156-294)||(7185777-7185915)
chr1 (154-215)||(31321007-31321068)
chr1 (316-356)||(7653879-7653919)
chr1 (316-356)||(7655090-7655130)
chr1 (316-356)||(36145537-36145577)
chr1 (316-356)||(36146756-36146796)
chr1 (249-329)||(46605808-46605888)
chr1 (444-487)||(7654959-7655002)
chr1 (158-318)||(33485222-33485379)
chr1 (156-214)||(46604439-46604497)
chr1 (154-215)||(7184321-7184382)
chr1 (159-203)||(44268891-44268935)
chr1 (156-215)||(44269074-44269133)
chr1 (155-213)||(8323441-8323499)
chr1 (227-325)||(24085582-24085680)
chr1 (155-213)||(28251930-28251988)
chr1 (155-213)||(31815772-31815830)
chr1 (155-213)||(32847813-32847871)
chr1 (155-309)||(18309084-18309238)
chr1 (447-508)||(24088976-24089037)
chr1 (157-213)||(9626469-9626525)
chr1 (155-203)||(10708029-10708077)
chr1 (316-356)||(19057693-19057733)
chr1 (324-356)||(28919269-28919301)
chr1 (325-356)||(33259216-33259247)
chr1 (325-356)||(33279375-33279406)
chr1 (154-208)||(9419825-9419879)
chr1 (155-213)||(11431331-11431389)
chr1 (155-213)||(31809988-31810046)
chr1 (156-213)||(8322521-8322578)
chr1 (154-211)||(26734424-26734481)
[»] chr4 (63 HSPs)
chr4 (561-841)||(53355519-53355798)
chr4 (561-841)||(19995414-19995696)
chr4 (561-839)||(55948294-55948575)
chr4 (561-839)||(44252028-44252307)
chr4 (564-790)||(39653603-39653829)
chr4 (154-322)||(19994496-19994664)
chr4 (154-325)||(19995944-19996115)
chr4 (154-325)||(55948843-55949014)
chr4 (155-356)||(44251604-44251820)
chr4 (154-323)||(44253084-44253253)
chr4 (155-323)||(18597631-18597799)
chr4 (154-323)||(55947358-55947527)
chr4 (158-356)||(53355100-53355315)
chr4 (155-296)||(42978838-42978979)
chr4 (155-296)||(48713381-48713522)
chr4 (155-296)||(42977197-42977338)
chr4 (156-296)||(32082552-32082692)
chr4 (154-296)||(54123464-54123606)
chr4 (158-325)||(10337106-10337272)
chr4 (159-296)||(10338087-10338226)
chr4 (156-296)||(54121825-54121967)
chr4 (158-296)||(48711860-48711998)
chr4 (444-508)||(19995745-19995809)
chr4 (444-508)||(44251908-44251972)
chr4 (444-508)||(53355404-53355468)
chr4 (155-214)||(18597855-18597914)
chr4 (159-324)||(22309029-22309194)
chr4 (156-352)||(39654532-39654731)
chr4 (155-296)||(42889730-42889870)
chr4 (444-507)||(55948631-55948691)
chr4 (154-319)||(22307669-22307834)
chr4 (249-352)||(39637362-39637466)
chr4 (156-247)||(24919052-24919143)
chr4 (159-213)||(38157023-38157077)
chr4 (154-212)||(54534976-54535034)
chr4 (155-268)||(21354723-21354837)
chr4 (316-356)||(19994673-19994713)
chr4 (316-356)||(19995898-19995938)
chr4 (164-215)||(9561854-9561905)
chr4 (155-295)||(39929274-39929414)
chr4 (157-215)||(33609344-33609402)
chr4 (239-296)||(16880408-16880465)
chr4 (447-504)||(39653499-39653556)
chr4 (319-356)||(55948779-55948816)
chr4 (227-327)||(3068995-3069095)
chr4 (224-296)||(16879226-16879298)
chr4 (316-356)||(44253018-44253058)
chr4 (159-215)||(54536697-54536753)
chr4 (160-215)||(7499360-7499415)
chr4 (155-213)||(4906128-4906186)
chr4 (156-213)||(4931998-4932055)
chr4 (159-313)||(33607471-33607625)
chr4 (155-211)||(4933335-4933391)
chr4 (155-211)||(29756271-29756327)
chr4 (316-348)||(55947553-55947585)
chr4 (156-211)||(4907465-4907520)
chr4 (154-213)||(29757610-29757669)
chr4 (159-214)||(42226721-42226776)
chr4 (154-213)||(55019359-55019418)
chr4 (159-197)||(55017743-55017781)
chr4 (150-203)||(11148344-11148397)
chr4 (154-215)||(39927931-39927992)
chr4 (156-213)||(47865296-47865353)
[»] chr7 (78 HSPs)
chr7 (561-839)||(45276827-45277105)
chr7 (561-839)||(31392990-31393268)
chr7 (561-838)||(8230954-8231232)
chr7 (561-841)||(21715994-21716259)
chr7 (561-837)||(32882053-32882329)
chr7 (561-839)||(40028893-40029155)
chr7 (154-325)||(21716509-21716680)
chr7 (154-323)||(21715070-21715239)
chr7 (156-322)||(45277860-45278026)
chr7 (150-323)||(31392052-31392225)
chr7 (157-322)||(8231527-8231692)
chr7 (155-323)||(8230069-8230237)
chr7 (155-319)||(31393555-31393719)
chr7 (159-325)||(40028460-40028626)
chr7 (155-325)||(45276409-45276578)
chr7 (154-323)||(40029921-40030090)
chr7 (171-323)||(4675689-4675840)
chr7 (155-325)||(32882605-32882774)
chr7 (159-323)||(32881119-32881283)
chr7 (156-296)||(46245122-46245262)
chr7 (154-293)||(46246497-46246636)
chr7 (158-296)||(14774515-14774652)
chr7 (158-296)||(15224968-15225105)
chr7 (154-295)||(12180559-12180700)
chr7 (444-508)||(21716311-21716375)
chr7 (154-324)||(13420177-13420347)
chr7 (154-296)||(15136859-15137000)
chr7 (444-508)||(8231304-8231368)
chr7 (444-508)||(32882388-32882452)
chr7 (444-508)||(40028779-40028843)
chr7 (444-508)||(45276713-45276777)
chr7 (155-294)||(37133570-37133709)
chr7 (444-508)||(31393333-31393397)
chr7 (154-293)||(11671208-11671347)
chr7 (155-325)||(12178482-12178652)
chr7 (227-296)||(15135449-15135518)
chr7 (157-293)||(37131836-37131972)
chr7 (155-296)||(30792749-30792896)
chr7 (162-296)||(11747398-11747532)
chr7 (156-297)||(11669841-11669982)
chr7 (154-213)||(706741-706800)
chr7 (156-324)||(37348735-37348903)
chr7 (154-294)||(43546651-43546791)
chr7 (154-215)||(21914638-21914699)
chr7 (316-356)||(21716463-21716503)
chr7 (316-356)||(31393485-31393525)
chr7 (316-356)||(40029873-40029913)
chr7 (316-356)||(45276584-45276624)
chr7 (154-213)||(708154-708213)
chr7 (317-355)||(40028651-40028689)
chr7 (154-215)||(28848556-28848617)
chr7 (155-215)||(3704397-3704457)
chr7 (316-356)||(8231460-8231500)
chr7 (227-295)||(9532534-9532602)
chr7 (316-356)||(21715265-21715305)
chr7 (155-215)||(25008091-25008151)
chr7 (316-356)||(32882541-32882581)
chr7 (242-285)||(31734685-31734728)
chr7 (155-213)||(32429872-32429930)
chr7 (155-213)||(41591514-41591572)
chr7 (154-203)||(31734766-31734815)
chr7 (154-215)||(38758317-38758378)
chr7 (316-356)||(4675623-4675663)
chr7 (316-348)||(8230245-8230277)
chr7 (154-214)||(9532621-9532681)
chr7 (155-215)||(25009485-25009545)
chr7 (316-356)||(31392251-31392291)
chr7 (153-213)||(41385811-41385871)
chr7 (316-356)||(45277793-45277833)
chr7 (154-213)||(27161997-27162056)
chr7 (240-278)||(21914413-21914451)
chr7 (156-213)||(4706634-4706691)
chr7 (156-213)||(4707470-4707527)
chr7 (227-280)||(11748887-11748940)
chr7 (154-210)||(21895366-21895423)
chr7 (156-213)||(28556246-28556303)
chr7 (156-213)||(41593205-41593262)
chr7 (154-215)||(43545340-43545401)
[»] chr3 (33 HSPs)
chr3 (561-841)||(33733875-33734158)
chr3 (561-839)||(53528398-53528678)
chr3 (159-356)||(33734361-33734558)
chr3 (155-325)||(53527969-53528139)
chr3 (155-322)||(33732964-33733131)
chr3 (155-356)||(53529378-53529594)
chr3 (156-296)||(31796753-31796893)
chr3 (155-296)||(40499171-40499312)
chr3 (154-296)||(41083189-41083332)
chr3 (156-296)||(48568449-48568589)
chr3 (159-296)||(31656956-31657094)
chr3 (155-293)||(41081801-41081939)
chr3 (155-293)||(48566995-48567133)
chr3 (139-293)||(31795356-31795510)
chr3 (444-508)||(33734208-33734272)
chr3 (444-508)||(53528277-53528338)
chr3 (159-293)||(30700299-30700433)
chr3 (154-268)||(41879922-41880036)
chr3 (159-214)||(22942339-22942394)
chr3 (154-213)||(32558917-32558976)
chr3 (316-356)||(33733158-33733198)
chr3 (316-356)||(53528148-53528188)
chr3 (155-198)||(8391400-8391443)
chr3 (159-294)||(32615566-32615702)
chr3 (155-295)||(45981406-45981546)
chr3 (156-213)||(31199249-31199306)
chr3 (154-214)||(3150020-3150080)
chr3 (155-213)||(3026883-3026941)
chr3 (156-213)||(32613883-32613941)
chr3 (155-213)||(33780656-33780714)
chr3 (156-213)||(20289592-20289649)
chr3 (155-208)||(30701847-30701900)
chr3 (152-213)||(32559885-32559946)
[»] chr5 (37 HSPs)
chr5 (561-841)||(30333368-30333646)
chr5 (561-841)||(1417833-1418114)
chr5 (561-839)||(25915115-25915398)
chr5 (156-323)||(1418828-1418995)
chr5 (156-325)||(30332283-30332452)
chr5 (155-325)||(30333898-30334067)
chr5 (158-323)||(25916170-25916335)
chr5 (158-325)||(25914493-25914659)
chr5 (155-296)||(38624715-38624856)
chr5 (156-293)||(17554925-17555063)
chr5 (236-356)||(1417491-1417626)
chr5 (156-293)||(8874196-8874333)
chr5 (157-296)||(39101716-39101855)
chr5 (158-296)||(8872522-8872659)
chr5 (154-296)||(39103330-39103472)
chr5 (158-293)||(36619546-36619682)
chr5 (155-293)||(38626092-38626230)
chr5 (188-292)||(11772623-11772727)
chr5 (154-296)||(36621145-36621287)
chr5 (444-508)||(1417716-1417780)
chr5 (444-508)||(25914793-25914857)
chr5 (154-296)||(27756704-27756846)
chr5 (155-215)||(16308564-16308624)
chr5 (444-503)||(30333704-30333763)
chr5 (159-293)||(11771201-11771335)
chr5 (227-293)||(17552041-17552108)
chr5 (316-356)||(1418780-1418820)
chr5 (316-356)||(25914665-25914705)
chr5 (316-356)||(25916104-25916144)
chr5 (316-356)||(30333852-30333892)
chr5 (154-197)||(16182608-16182651)
chr5 (157-296)||(16310018-16310157)
chr5 (157-215)||(18201345-18201403)
chr5 (316-350)||(30332461-30332495)
chr5 (156-295)||(42775420-42775559)
chr5 (155-213)||(35988854-35988912)
chr5 (155-188)||(4285758-4285791)
[»] chr2 (57 HSPs)
chr2 (561-841)||(1841106-1841386)
chr2 (156-328)||(1841642-1841814)
chr2 (159-323)||(13947751-13947914)
chr2 (159-323)||(14088940-14089103)
chr2 (155-323)||(1840156-1840324)
chr2 (155-296)||(45499304-45499445)
chr2 (154-296)||(40303291-40303433)
chr2 (155-293)||(28563375-28563513)
chr2 (154-293)||(45492954-45493093)
chr2 (154-293)||(45500696-45500835)
chr2 (156-293)||(40304684-40304821)
chr2 (154-325)||(13948485-13948659)
chr2 (154-325)||(14089692-14089866)
chr2 (156-296)||(16142226-16142366)
chr2 (448-508)||(1841442-1841502)
chr2 (444-508)||(13948268-13948332)
chr2 (444-508)||(14089475-14089539)
chr2 (154-325)||(16143486-16143657)
chr2 (155-294)||(38729983-38730123)
chr2 (155-277)||(38728184-38728305)
chr2 (561-606)||(13948172-13948217)
chr2 (561-606)||(14089379-14089424)
chr2 (155-215)||(44421342-44421402)
chr2 (158-296)||(7317392-7317530)
chr2 (158-296)||(44465009-44465147)
chr2 (316-356)||(13947922-13947962)
chr2 (316-356)||(13948421-13948461)
chr2 (316-356)||(14089129-14089169)
chr2 (316-356)||(14089628-14089668)
chr2 (318-356)||(1840352-1840390)
chr2 (154-212)||(18161046-18161104)
chr2 (155-213)||(18224847-18224905)
chr2 (156-295)||(20587039-20587178)
chr2 (154-313)||(22053123-22053281)
chr2 (157-215)||(22060480-22060538)
chr2 (224-296)||(44095423-44095495)
chr2 (154-270)||(6844042-6844158)
chr2 (155-214)||(35588126-35588185)
chr2 (155-214)||(44097354-44097413)
chr2 (156-198)||(20588476-20588518)
chr2 (155-213)||(22054333-22054391)
chr2 (155-213)||(43516397-43516455)
chr2 (154-215)||(28165656-28165717)
chr2 (154-215)||(34591723-34591784)
chr2 (154-215)||(44492311-44492372)
chr2 (159-215)||(6842718-6842774)
chr2 (154-198)||(18159885-18159929)
chr2 (154-206)||(18308190-18308242)
chr2 (654-689)||(13948138-13948173)
chr2 (654-689)||(14089345-14089380)
chr2 (159-213)||(10345149-10345203)
chr2 (155-213)||(21716439-21716497)
chr2 (155-213)||(44820932-44820990)
chr2 (156-213)||(22060162-22060219)
chr2 (156-213)||(24559554-24559611)
chr2 (156-213)||(40128929-40128986)
chr2 (227-296)||(44097270-44097339)
[»] chr6 (22 HSPs)
chr6 (630-841)||(19083512-19083725)
chr6 (18-155)||(33704990-33705127)
chr6 (157-322)||(19084013-19084178)
chr6 (156-296)||(8745432-8745572)
chr6 (227-323)||(19082737-19082833)
chr6 (155-296)||(1258358-1258500)
chr6 (155-293)||(1256713-1256851)
chr6 (158-295)||(8752720-8752857)
chr6 (157-296)||(2956154-2956293)
chr6 (155-325)||(7678533-7678707)
chr6 (561-608)||(19083725-19083772)
chr6 (316-356)||(19082841-19082881)
chr6 (444-488)||(19083831-19083875)
chr6 (156-295)||(1443417-1443556)
chr6 (154-214)||(10707674-10707734)
chr6 (46-99)||(21188596-21188649)
chr6 (324-356)||(19083964-19083996)
chr6 (156-214)||(4496505-4496563)
chr6 (155-213)||(11065656-11065714)
chr6 (155-213)||(28302166-28302224)
chr6 (155-213)||(28509849-28509907)
chr6 (154-183)||(19082695-19082724)
[»] scaffold0489 (5 HSPs)
scaffold0489 (630-841)||(6251-6468)
scaffold0489 (150-356)||(5369-5581)
scaffold0489 (154-322)||(6708-6876)
scaffold0489 (444-507)||(6569-6632)
scaffold0489 (561-608)||(6468-6515)
[»] scaffold0633 (1 HSPs)
scaffold0633 (156-278)||(6831-6953)
[»] scaffold1176 (1 HSPs)
scaffold1176 (155-295)||(2050-2190)
[»] scaffold0280 (1 HSPs)
scaffold0280 (154-296)||(12129-12272)
[»] scaffold0018 (1 HSPs)
scaffold0018 (156-295)||(193591-193730)
[»] scaffold1118 (1 HSPs)
scaffold1118 (164-293)||(2420-2549)
[»] scaffold0129 (1 HSPs)
scaffold0129 (154-213)||(4259-4318)
[»] scaffold0524 (2 HSPs)
scaffold0524 (159-215)||(7701-7757)
scaffold0524 (154-215)||(9069-9130)
[»] scaffold0765 (1 HSPs)
scaffold0765 (156-213)||(359-416)


Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-141; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 25264760 - 25265038
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264760 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 25264859  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264860 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 25264959  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  25264960 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctg 25265038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 561 - 839
Target Start/End: Complemental strand, 33295066 - 33294787
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33295066 tcatcatctcactctcaatagacaacttctcataaacccaaacaaaatccccattgataatggtcagattaacatctcaacactaaaatccacaatgttc 33294967  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33294966 atagtcccaactaaacttttattaataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattaaaaaaattcaca 33294867  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  33294866 aaattctcaaattgaaaaacctaaagaatgatttttttttcattaccaactctcgtctcatcattgatctcgcatctctg 33294787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 154 - 325
Target Start/End: Original strand, 25264338 - 25264509
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||| |||||||||    
T  25264338 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttttaaaacaatccctgtaaattaataact 25264437  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264438 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 25264509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 156 - 323
Target Start/End: Complemental strand, 25265964 - 25265797
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||       ||||||||||||||||| |||||||||||||||    
T  25265964 ggcttaaatatgtaaatcgtctctgtaatttggcgtgttttttgttttcgtccctgtatctttttttgttttaaaacaatccctataagttaataacttt 25265865  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25265864 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggacgatgacgtgg 25265797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 154 - 322
Target Start/End: Complemental strand, 33295506 - 33295339
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||       ||| |||||||| || |||||||||||||||    
T  33295506 taggcttaaatatgtaaatcgtctctgtaatttggcgtgttttttgtttttgtccctgtatctttttt-gttctaaaacaacccttgtaagttaataact 33295408  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  33295407 ttttgatttccgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacaaaggatgacgtg 33295339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 33293938 - 33294109
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||| |||||||||| ||||||||| || ||||||||||||||||| ||||||        ||| |||||||| |||| ||| |||||||||    
T  33293938 aggcttaaatatataaatcgtccttgtaatttgacgcgtttttggttttcgtccttgtatcttttttttgttctaaaacaacccctataaattaataact 33294037  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33294038 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacgtggca 33294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 25264643 - 25264707
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264643 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 25264707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 324
Target Start/End: Complemental strand, 39886137 - 39885967
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||||        || |||||||| ||||||||||||  | |     
T  39886137 taggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatctttttttattctaaaacaacccctgtaagttataagca 39886038  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggc 324  Q
    ||||| |||| |||||| ||||||   || ||||||||||||   ||||||||||||||||||||| ||||    
T  39886037 ttttggttttagtccctgccgtcataatctgttacaaaaacgtctatgtggcaaacggaggatgacatggc 39885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 33295183 - 33295119
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33295183 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 33295119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 3158098 - 3157956
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||       ||| |||||||  ||||||||||||  |||     
T  3158098 taggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacagaccctgtaagttataaaca 3157999  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||  |||||| |||||| | || |||||| ||||||    
T  3157998 ttttgctttcggtccctgccgtcagcatctgttacacaaacgc 3157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 39884615 - 39884779
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||||       ||| ||||| || || |||||||||  | | |    
T  39884615 aggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatctttttttgttctaaaataacccttgtaagttataagcat 39884714  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgac 319  Q
    |||| |||| |||||| || |||   || ||||||||||||   |||||||||||||||||||||    
T  39884715 tttggttttagtccctgccttcataatctgttacaaaaacgtctatgtggcaaacggaggatgac 39884779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 2552408 - 2552544
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    |||||||||||||||||||| |||||| || ||||||||||| || ||||||||| |||       ||| |||||||| ||| ||||||||  ||  |||    
T  2552408 gcttaaatatgtaaatcgtctctgtaagtttgcgtgtttttgattatcgtccctgcatc-ttttttgttctaaaacaaaccccgtaagttacaaatgttt 2552506  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    |||||||||||| |||||||||| |  |||||||||||    
T  2552507 tgattttcgtccttcccgtcaacatttgttacaaaaac 2552544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 17707509 - 17707450
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||    
T  17707509 taggcttaaatatgtaaatggtccatgtaatttagcgtgtttttggttttagtccctgta 17707450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 22714109 - 22714050
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    |||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||    
T  22714109 aggcttaaatatgtaaatcgcccctgtaagttcgtgtgtttttggttttcgtccctgtat 22714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 27166778 - 27166914
Alignment:
Q  169 aaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgattttcgtcc 268  Q
    ||||||||| |||||||||| ||||||||| |||||| | |||||||        ||| ||||| |||||||||||||  || | ||||||||||||| |    
T  27166778 aaatcgtccttgtaatttggtgtgtttttgcttttcgccactgtatctttttttctttcaaaaccatccctgtaagttgctatcgttttgattttcgttc 27166877  T
Q  269 ctcccgtcaacttccgttacaaaaacgcacatgtggc 305  Q
    ||||||| | |||| ||||||||||||  ||||||||    
T  27166878 ctcccgttagcttctgttacaaaaacgtgcatgtggc 27166914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 36899897 - 36899955
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  36899897 aggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgta 36899955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 25264515 - 25264555
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25264515 tgacgtggcaaacttattgatgagtcacacagtgagaggga 25264555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 45447099 - 45447179
Alignment:
Q  249 taactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaact 329  Q
    |||||||||||  ||||||||| |||||| | ||||||| ||||||||||||||||| |||||||| ||| ||||| ||||    
T  45447099 taactttttgaaattcgtccctgccgtcaccatccgttaaaaaaacgcacatgtggctaacggaggctgatgtggcgaact 45447179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 17706163 - 17706222
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| ||||    
T  17706163 taggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccttgta 17706222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 15279691 - 15279641
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtc 207  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  15279691 gcttaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtc 15279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 15460060 - 15460010
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtc 207  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  15460060 gcttaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtc 15460010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 5461936 - 5462074
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||||||| | |||| || |||||||||| |||||||||  ||||||       ||| |||||||  |||||||| |||  ||| ||||    
T  5461936 cttaaatatgtaaatcgtcaccgtaagttcgcgtgttttttgttttcgtctttgtatctttttttgttctaaaacagaccctgtaatttataaacatttt 5462035  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | |||| |||||| |||||| | || |||||||||||||    
T  5462036 gcttttggtccctgccgtcagcatctgttacaaaaacgc 5462074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 33295312 - 33295275
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagag 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33295312 tgacgtggcaaacttattgatgagtcacacagtgagag 33295275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 357975 - 358034
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  357975 taggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 358034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 36901238 - 36901179
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||| |||| ||| |||||    
T  36901238 taggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttgtttttagtctctgta 36901179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 26720309 - 26720252
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctg 211  Q
    |||||||||||||||||||  ||||  ||| || ||||||||||||||||||||||||    
T  26720309 taggcttaaatatgtaaataatccccataagttcgcgtgtttttggttttcgtccctg 26720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 1650270 - 1650210
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| |||||||| | ||||||    
T  1650270 aggcttaaatatgtaaaccgtccttgtaagttcgcgtgtttttagttttcgttcatgtatc 1650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 25265771 - 25265731
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  25265771 tgacgtggaaaacttattgatgagtcacaaagtgagaggga 25265731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 31819051 - 31819107
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||  |||||||||||| |||||| | |||||||||||||||||| ||||||    
T  31819051 cttaaataaataaatcgtccctataattttgtgtgtttttggttttcgtcactgtat 31819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 31916971 - 31917023
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 208  Q
    |||||||||||||| ||||||| |||||||||| ||||||||  |||||||||    
T  31916971 ggcttaaatatgtatatcgtccatgtaatttggtgtgttttttattttcgtcc 31917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 45448551 - 45448499
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 208  Q
    ||||||||||||||||  |||||| ||| || |||||||||||||||||||||    
T  45448551 ggcttaaatatgtaaaaggtccctctaagttcgcgtgtttttggttttcgtcc 45448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 26719385 - 26719444
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||| ||||||||||| ||| ||||| || |||||||||| |||||||||| ||||||    
T  26719385 ggcttatatatgtaaatcatccatgtaagttcgcgtgttttttgttttcgtccttgtatc 26719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 31917672 - 31917618
Alignment:
Q  238 ctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaa 292  Q
    |||||||||||||| ||||  ||||||||||||||||| || || ||||||||||    
T  31917672 ctgtaagttaataaattttctattttcgtccctcccgttaattttcgttacaaaa 31917618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 11761038 - 11761095
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  11761038 ggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 11761095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 26635510 - 26635567
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  26635510 ggcttaaatatgcaaaccgtccctgtaatttgggttcattttgattttcgtccctgta 26635567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 561 - 841
Target Start/End: Original strand, 33258281 - 33258561
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33258281 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 33258380  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33258381 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 33258480  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    ||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  33258481 aaactctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 33258561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 561 - 841
Target Start/End: Original strand, 33278453 - 33278733
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33278453 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 33278552  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33278553 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 33278652  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    ||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  33278653 aaactctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 33278733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 561 - 839
Target Start/End: Complemental strand, 36146555 - 36146278
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36146555 tcatcatctcactctcaatagacaacttttcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 36146456  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36146455 atagtctcagctaaacttttattgataatatcaaaatcaaattataataacaaaatcctcattgtgaatactcgaattcccaatattga-aaaattcaca 36146357  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  36146356 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctg 36146278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 561 - 839
Target Start/End: Complemental strand, 7654900 - 7654621
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7654900 tcatcatctcactctcaatagacaacttttcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 7654801  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7654800 atagtcccagctaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatactcgaattcccaatattga-aaaattcaca 7654702  T
Q  761 aaattctcaaattgaaaaacctaaagaatga--nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    ||||||| |||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  7654701 aaattcttaaattgaaaaacctaaagaatgattttttttttcattaccaactctcgtctcatcattgatctcgcatctctg 7654621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 28920287 - 28920006
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  28920287 tcatcatatcactctcaatagacaacttctcacaaacccaaacaaaacccccattgacaatgatcagattgaaatctcaacactaaaatccacaatgttc 28920188  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28920187 atagtccca-ctaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaatttccaatattgaaaaaattcaca 28920089  T
Q  761 aaattctcaaattgaaaaacctaaagaatga--nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  28920088 aaattctcaaattgaaaaacctaaagaatgatgttttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 28920006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 19056707 - 19056986
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  19056707 tcatcatctcactctcaatagacaacttctgacaaacctaaacaaaattcccattgataatggtcagattgacatctcaacactaaaatctacaatgttc 19056806  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |    
T  19056807 acagtcccagctaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcaaatttccaatattgaaaaaattcaaa 19056906  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  19056907 aaattctcaaattgaaaaacctaaagaatgatttttttttcattaccaactctcgtctcatcattgatctcgcatctctg 19056986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 155 - 356
Target Start/End: Original strand, 33257880 - 33258080
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||       ||| |||||||| |||||||||||||||||||    
T  33257880 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatctttttttgttctaaaacaa-ccctgtaagttaataactt 33257978  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaacttattgatgagtcacacagtgagagg 354  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33257979 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcaaatgtggcaaacggaggatgacgtggcaaacttattgatgagtcacacagtgagagg 33258078  T
Q  355 ga 356  Q
    ||    
T  33258079 ga 33258080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 155 - 356
Target Start/End: Original strand, 33278052 - 33278252
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||       ||| |||||||| |||||||||||||||||||    
T  33278052 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatctttttttgttctaaaacaa-ccctgtaagttaataactt 33278150  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaacttattgatgagtcacacagtgagagg 354  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33278151 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcaaatgtggcaaacggaggatgacgtggcaaacttattgatgagtcacacagtgagagg 33278250  T
Q  355 ga 356  Q
    ||    
T  33278251 ga 33278252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 7655325 - 7655154
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       ||| |||||||| ||||||||||||||||||    
T  7655325 taggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataact 7655226  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  7655225 ttttgattttcgtccctcccgtcaacttccattacaaaaacgcacatgtggcaaacagaggatgacgtggca 7655154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 16673316 - 16673148
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       ||| |||||||| |||| ||||||||||||||    
T  16673316 aggcttaaatatgtaaatcgtccctgtaattttgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactt 16673217  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16673216 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacgtgg 16673148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 28920716 - 28920545
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||       ||| |||||||| |||||||||||||||||     
T  28920716 taggcttaaatatgtaagtcgtccctgtaatttggcgtgttttttgtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataacc 28920617  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28920616 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgatgtggca 28920545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 156 - 323
Target Start/End: Complemental strand, 33259431 - 33259264
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||| |||||||||||||||    
T  33259431 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataacttt 33259332  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  33259331 ttaattttcgtccctcccgtcaacttccgttacaaaaatgcacatgtggcaaacggacgatgacgtgg 33259264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 156 - 323
Target Start/End: Complemental strand, 33279590 - 33279423
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||| |||||||||||||||    
T  33279590 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataacttt 33279491  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  33279490 ttaattttcgtccctcccgtcaacttccgttacaaaaatgcacatgtggcaaacggacgatgacgtgg 33279423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 154 - 323
Target Start/End: Original strand, 36145342 - 36145511
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||       ||| |||||||| |||| |||||||||||||    
T  36145342 taggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataact 36145441  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  36145442 ttttgattttcgtccctcccgtcaacttccattacaaaaatgcacatgtggcaaacggaggatgacgtgg 36145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 28919082 - 28919252
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||       ||| |||||||| |||| ||||||||||||||    
T  28919082 aggcttaaatatataaattgtccctgtaatttggcgtgtttttgattttcatccctgtatctttttttgttctaaaacaacccctataagttaataactt 28919181  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28919182 tttgattttcgtcccttccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 28919252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 561 - 784
Target Start/End: Complemental strand, 24088927 - 24088702
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||| |||  ||||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||| |    
T  24088927 tcatcatatcatcctcaatacacaacttctcacaaacctaaacaaaattctcattgacagtggacagattgacatctcaacaccaaaatccacaatgtcc 24088828  T
Q  661 ata--gtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattca 758  Q
    |||  |||| ||| ||||| ||||||||||||||  |||||||||||||||| ||||||||||||  ||||||| ||||||||||| |||||||||||      
T  24088827 atatagtcctaacaaaactcttattgataatatcataatcaaattataacaaaaaaatcctcattaagaatgcttgaattcccaattttgaaaaaattac 24088728  T
Q  759 caaaattctcaaattgaaaaacctaa 784  Q
     |||||||  ||||||||||||||||    
T  24088727 gaaaattccaaaattgaaaaacctaa 24088702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 156 - 323
Target Start/End: Original strand, 7653686 - 7653853
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||       ||| |||||||  |||| |||||||||||||||    
T  7653686 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacagcccctataagttaataacttt 7653785  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  7653786 ttgatttttgtccctcccgtcaacttccattacaaaaatgcacatgtggcaaacggaggatgacgtgg 7653853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 36146962 - 36146802
Alignment:
Q  164 tatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgatttt 263  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||       ||| ||||||||||| |||||||||||||||||||||||||    
T  36146962 tatgtaaatcgtccctgtaatttgacgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaatccatgtaagttaataactttttgatttt 36146864  T
Q  264 cgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  36146863 cgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaagaaaggatgacgtggca 36146802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 167 - 323
Target Start/End: Complemental strand, 19057915 - 19057759
Alignment:
Q  167 gtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgattttcgt 266  Q
    |||||||||| |||||||||||||||||||| |||||||| | ||||||       ||| |||||||| |||| ||||||||||||||||| ||||||||    
T  19057915 gtaaatcgtctctgtaatttggcgtgtttttagttttcgttcatgtatctttttttgttctaaaacaacccctataagttaataacttttttattttcgt 19057816  T
Q  267 ccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19057815 cccttccgtcaacttctgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 19057759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 16672726 - 16672815
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggat 316  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16672726 taaaacaacccctataagttaataactttttgatttccgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggat 16672815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 41668273 - 41668411
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||        ||| |||||||| | ||||||||||||||||||    
T  41668273 ggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtctctgtatatttttttgttctaaaacaacctctgtaagttaataacttt 41668372  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    ||| |||||||| ||||||||||  || |||||||||||    
T  41668373 ttgcttttcgtctctcccgtcaaactctgttacaaaaac 41668411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 50317106 - 50316969
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    ||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||       ||| |||||||| ||||||||||||  ||| |||||    
T  50317106 ttaaatatgtaaatcgtccatgtaagttcgcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaacgttttg 50317007  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||||||||||| | || |||||||||||||    
T  50317006 attttcgtccctcccgtcagcatctgttacaaaaacgc 50316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 1969636 - 1969701
Alignment:
Q  245 ttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1969636 ttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacg 1969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 24439007 - 24438867
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc-nnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||        ||| |||||||| ||||||||||||  ||| |    
T  24439007 ggctaaaatatgtaaatcgtccctgtaaattcgcgtgtttttggttttcgtccctgtatcttttttttgttctaaaacaaaccctgtaagttacaaacgt 24438908  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    ||||||||||||||| ||||||| | || ||||||||||||    
T  24438907 tttgattttcgtcccacccgtcagcatctgttacaaaaacg 24438867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 22684211 - 22684069
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||| ||||||||||  |||| ||||| || ||||||||||||||||||||| ||||||       ||| |||||||| |||||||| || ||||||    
T  22684211 taggctttaatatgtaaaaggtccttgtaagttcgcgtgtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgtaaattgataact 22684112  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||| |||||||||| ||||||||||| |||| ||||||||    
T  22684111 ttttgaatttcgtccctaccgtcaacttctgttaaaaaaacgc 22684069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 19056589 - 19056653
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19056589 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 19056653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 33258167 - 33258231
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33258167 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 33258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 33278339 - 33278403
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33278339 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 33278403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 154 - 292
Target Start/End: Original strand, 19249318 - 19249455
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||       ||| |||||||| ||| |||||||||||||     
T  19249318 taggcttaaatatgtaaatcgtccctgtaatttggattgtttttggttttcgtctttgtatctttttttgttctaaaacaaccccggtaagttaataac- 19249416  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaa 292  Q
    ||||| ||||||||||| |||| ||  || |||||||||    
T  19249417 ttttgcttttcgtcccttccgtaaaactctgttacaaaa 19249455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 19251219 - 19251082
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||||||||||||| ||| |||||||||| || || |||||| ||||       ||| |||||||| |||||||| ||||||| |||||    
T  19251219 cttaaatatgtaaatcgtccctgtatttttgcgtgttttttgtgtttgtccctatatctttttttgttctaaaacaacccctgtaaattaataatttttt 19251120  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    | ||||||||||||| |||||  || ||||||||||||    
T  19251119 gcttttcgtccctccagtcaaactctgttacaaaaacg 19251082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 16592022 - 16592080
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16592022 gcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 16592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 503
Target Start/End: Complemental strand, 28920407 - 28920348
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaat 503  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  28920407 tagctttcttcatcttcttcctttcacctcttttacatcttcatcattgtcttcataaat 28920348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 13211173 - 13211031
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| ||||||||||||||| ||||||||| || | ||||||||||||||||||||||||||       ||| |||||||  ||||||||||||  ||      
T  13211173 taggtttaaatatgtaaatcttccctgtaagtttgtgtgtttttggttttcgtccctgtatctctttttgttctaaaacagaccctgtaagttataaatg 13211074  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| ||||  ||||| |||||| | ||||||||||||||||    
T  13211073 ttttgcttttattccctgccgtcatcatccgttacaaaaacgc 13211031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 297
Target Start/End: Original strand, 50315316 - 50315459
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||||||| |||||         ||| ||||||   |||||||||||  ||||     
T  50315316 taggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtctctgtaagtttttttgttctaaaactcaccctgtaagttgttaacc 50315415  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgca 297  Q
    ||||| |||| ||||||  ||| |||||||||||||||||||||    
T  50315416 ttttggttttagtccctaacgttaacttccgttacaaaaacgca 50315459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 33981502 - 33981627
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||  || |||||||       ||| ||||||||  | |||||||||  |||     
T  33981502 taggcttaaatatgtaaatcgtccctataagttcgtgtgtttttggttttattctctgtatctttttttgttctaaaacaaatcatgtaagttacaaacg 33981601  T
Q  254 ttttgattttcgtccctcccgtcaac 279  Q
    ||||||||||||||| ||||||||||    
T  33981602 ttttgattttcgtccatcccgtcaac 33981627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 46652842 - 46652701
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    |||||||||||||       |||| ||||  |||| ||||||||| || |     
T  46652842 taggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttactagcc 46652743  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
     ||||   |||||||||||||| |||| ||||||||||||||    
T  46652742 gtttgcaattcgtccctcccgttaactcccgttacaaaaacg 46652701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 24437073 - 24437188
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || |||||||||| ||||||||| |||||||       ||| |||||||| |||||||| ||  ||||||    
T  24437073 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtcactgtatctttttttgttctaaaacaaaccctgtaaattgttaactt 24437172  T
Q  255 tttgattttcgtccct 270  Q
    |||| |||| ||||||    
T  24437173 tttggttttagtccct 24437188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 448 - 508
Target Start/End: Complemental strand, 36146664 - 36146607
Alignment:
Q  448 tttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  36146664 tttcttcatcttcttccttccacctcttttacatcttcatc---gtcttcataaattcatc 36146607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 7185915 - 7185777
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||| ||||||||| ||||| || || ||||||| |||||||||||||||||        || |||||||  ||||||||||||  ||| ||    
T  7185915 ggcttaaatatgcaaatcgtccttgtaagtttgcatgttttttgttttcgtccctgtatctttttttattctaaaacagaccctgtaagttataaacatt 7185816  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    ||| |||| |||||| |||||| | || |||||||||||    
T  7185815 ttgcttttggtcccttccgtcagcatctgttacaaaaac 7185777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 31321007 - 31321068
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||  |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  31321007 taggcttaaatagttaaatcatccctgtaagttcgcgtgtttttggttttcgtccctgtatc 31321068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 7653879 - 7653919
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7653879 tgacgtggcaaacttattgatgagtcacacagtgagaggga 7653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 7655130 - 7655090
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7655130 tgacgtggcaaacttattgatgagtcacacagtgagaggga 7655090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 36145537 - 36145577
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36145537 tgacgtggcaaacttattgatgagtcacacagtgagaggga 36145577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 36146796 - 36146756
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36146796 tgacgtggcaaacttattgatgagtcacacagtgagaggga 36146756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 46605888 - 46605808
Alignment:
Q  249 taactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaact 329  Q
    |||||||||||  ||||||||| |||||| | ||||||| ||||||||||||||||| |||||||| ||| ||||| ||||    
T  46605888 taactttttgaaattcgtccctgccgtcaccatccgttaaaaaaacgcacatgtggctaacggaggctgatgtggcgaact 46605808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 7655002 - 7654959
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcat 487  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  7655002 tagctttcttcatcttcttccttccacctcttttacatcttcat 7654959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 318
Target Start/End: Complemental strand, 33485379 - 33485222
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||||||||||||| |||||||||| | ||||||||| ||||||||| |||||         |||| || |  ||| || |||||  |||| ||||    
T  33485379 cttaaatatgtaaatcgttcctgtaatttagtgtgtttttgtttttcgtcc-tgtatttattta--tttttaacccgtccttgaaagttgttaacgtttt 33485283  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatga 318  Q
    | |||||||||||||||| | |||  |||||||||||| ||||||||| ||||||||||||    
T  33485282 gcttttcgtccctcccgttagcttgtgttacaaaaacgtacatgtggctaacggaggatga 33485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 46604439 - 46604497
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||| |||||    
T  46604439 ggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccttgtat 46604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 7184321 - 7184382
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||| || | ||||| || |||||||||||||||||||| |||||||    
T  7184321 taggcttaaatatgtaaattgttcttgtaagttcgcgtgtttttggttttcgtctctgtatc 7184382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 44268891 - 44268935
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 203  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  44268891 ttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggtttt 44268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 44269133 - 44269074
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||||| |||||| || ||||||||||| ||||| ||||| ||||    
T  44269133 ggcttaaatatgtaaatcgtctctgtaaattcgcgtgtttttgattttcatccctatatc 44269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 8323499 - 8323441
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  8323499 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 8323441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 24085582 - 24085680
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||| ||| |||||||| ||  |||| ||||||||||| ||||||  || | |||| ||||||||||| ||||||||||||||   |||||||||||||    
T  24085582 taaagcaaaccctgtaaattgttaaccttttgattttcatccctcttgttagcttctgttacaaaaacacacatgtggcaaacaacggatgacgtggca 24085680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 28251930 - 28251988
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||| |||  ||||||||||||| |||  |||||||||||||||||||||    
T  28251930 aggcttaaatatgcaaaaggtccctgtaatttagcgcatttttggttttcgtccctgta 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 31815830 - 31815772
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  31815830 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 31815772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 32847813 - 32847871
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  32847813 aggcttaaataagtaaaaggtccctgtaagttggcgcgtttttggttttagtccctgta 32847871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 309
Target Start/End: Original strand, 18309084 - 18309238
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||| |||||||||||||| ||| ||   ||| ||||| ||||||||||||||||       ||| ||||||||||| |||||||||  ||| |    
T  18309084 aggcttaaatttgtaaatcgtccctctaaattcttgtgattttgattttcgtccctgtatctttttttgttctaaaacaatccttgtaagttataaacgt 18309183  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaac 309  Q
    |||| |||| || |||  ||||| | ||  ||||||||||| | ||||| |||||    
T  18309184 tttggttttggttcctgtcgtcatcgtctattacaaaaacgtatatgtgacaaac 18309238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 24089037 - 24088976
Alignment:
Q  447 ctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    |||||||||||||||||| |||| ||||||  ||||||||| ||| || |||||||||||||    
T  24089037 ctttcttcatcttcttccgtccatctctttttcatcttcattattatcatcataaattcatc 24088976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 9626469 - 9626525
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||  |||||||||| || |||| ||||| |||||||||||||||    
T  9626469 gcttaaatatgtaaaaggtccctgtaagttcgcgtattttttgttttcgtccctgta 9626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 10708029 - 10708077
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 203  Q
    |||||||||||||||||  |||||||||| || ||||||||||||||||    
T  10708029 aggcttaaatatgtaaaaagtccctgtaagttcgcgtgtttttggtttt 10708077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 19057733 - 19057693
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  19057733 tgacgtggcaaacttattgatcaatcacacagtgagaggga 19057693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 28919269 - 28919301
Alignment:
Q  324 caaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||    
T  28919269 caaacttattgatgagtcacacagtgagaggga 28919301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 356
Target Start/End: Complemental strand, 33259247 - 33259216
Alignment:
Q  325 aaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||||||||||||||    
T  33259247 aaacttattgatgagtcacacagtgagaggga 33259216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 356
Target Start/End: Complemental strand, 33279406 - 33279375
Alignment:
Q  325 aaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||||||||||||||    
T  33279406 aaacttattgatgagtcacacagtgagaggga 33279375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 9419879 - 9419825
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 208  Q
    ||||||||||||||||||  |||| ||||| |||||||||||||| |||| ||||    
T  9419879 taggcttaaatatgtaaaaggtccttgtaagttggcgtgtttttgcttttagtcc 9419825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 11431389 - 11431331
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||| |||||  |||||||||| |||||| |||||| ||||| |||||||||    
T  11431389 aggcttaaataagtaaaaggtccctgtaagttggcgcgtttttcgttttagtccctgta 11431331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 31809988 - 31810046
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  ||||| |||||||||||||||    
T  31809988 aggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 31810046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 8322521 - 8322578
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||  |||||||||| || |||  ||||| |||||||||||||||    
T  8322521 ggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 8322578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 26734424 - 26734481
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctg 211  Q
    ||||||||||||||||||  |||| ||||| || |||  |||||||||||||||||||    
T  26734424 taggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctg 26734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 561 - 841
Target Start/End: Original strand, 53355519 - 53355798
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53355519 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 53355618  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53355619 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 53355718  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  53355719 aaattctcaaattgaaaaacctaaagaatga-tttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 53355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 19995696 - 19995414
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19995696 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 19995597  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19995596 atagtcccaactaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcaaattcccaatattgaaaaaattcaca 19995497  T
Q  761 aaattctcaaattgaaaaacctaaagaatga--nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  19995496 aaattctcaaattgaaaaacctaaagaatgattttttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 19995414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 561 - 839
Target Start/End: Complemental strand, 55948575 - 55948294
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55948575 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatctccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 55948476  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55948475 atagtcccaactaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatactcgaattcccaatattgaaaaaattcaca 55948376  T
Q  761 aaattctcaaattgaaaaacctaaagaatga---nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||    
T  55948375 aaattctcaaattgaaaaacctaaagaatgattttttgttttcattaccaactctcgtctcatcattgatctcgcatctctg 55948294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 44252028 - 44252307
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44252028 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 44252127  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44252128 atagtctcagctaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgatcgaattcccaatattgaaaaaattcaca 44252227  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    ||||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||||    
T  44252228 aaattctcaaattaaaaaacctaaagaatgatttttttttcattaccaactcttgtctcatcattgatctcgcatctctg 44252307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 564 - 790
Target Start/End: Original strand, 39653603 - 39653829
Alignment:
Q  564 tcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttcata 663  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  39653603 tcatctcgccctcaatagacaacatctcacaaacccaaacaaaatccccattgataatggtcagattgacgcctcaacactaaaatccacaatgttcata 39653702  T
Q  664 gtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcacaaaa 763  Q
    |||||||| ||| | ||||||||||||||  |||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  39653703 gtcccaacaaaattcttattgataatatcataatcaaattataacaacaaagtcctcattgagaatgctcaaattctcaatattgaaaaaattcacaaaa 39653802  T
Q  764 ttctcaaattgaaaaacctaaagaatg 790  Q
     |  |||||||||||||||||||||||    
T  39653803 cttccaaattgaaaaacctaaagaatg 39653829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 154 - 322
Target Start/End: Original strand, 19994496 - 19994664
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||| |||| |||||||||||||    
T  19994496 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataact 19994595  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  19994596 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaccatgacgtg 19994664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 19996115 - 19995944
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       ||| |||||||| ||||||||||||||||||    
T  19996115 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttggtccctgtatctttttttgttctaaaacaacccctgtaagttaataact 19996016  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  19996015 ttttgattttcgtccctcccatcaacttccgttacaaaaacgcacatgtggcaaatggatgatgacgtggca 19995944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 55949014 - 55948843
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||| |||||||| ||||||||||||||||||    
T  55949014 taggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataact 55948915  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55948914 tttggattttcttccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacgtggca 55948843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 155 - 356
Target Start/End: Original strand, 44251604 - 44251820
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||| |||||||| || ||||||||||||||||    
T  44251604 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaacccttgtaagttaataactt 44251703  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggagga---------------tgacgtggcaaacttattgatgag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||               ||||||||||||||||||||||||    
T  44251704 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacatggaagtgcctgacgtggcaaacttattgatgag 44251803  T
Q  340 tcacacagtgagaggga 356  Q
    |||||||||||||||||    
T  44251804 tcacacagtgagaggga 44251820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 154 - 323
Target Start/End: Complemental strand, 44253253 - 44253084
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||       ||| |||||||| |||| |||||||||||||    
T  44253253 taggcttaaatatgtaaatcgtccctttaatttggcgtgtttttggttttcgtccctatatctttttttgttctaaaacaacccctataagttaataact 44253154  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44253153 ttttgattttcgtctctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatggcgtgg 44253084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 18597631 - 18597799
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||        || |||||||| | | |||||||||||||||    
T  18597631 aggcttaaatatttaaatcgtccatgtaatttgccgtgtttttggttttcgtccctgtatctttttttattctaaaacaacctccgtaagttaataactt 18597730  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18597731 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 18597799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 154 - 323
Target Start/End: Original strand, 55947358 - 55947527
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| |||||||  |||| |||||||||||||    
T  55947358 taggcttaaatatgtaaatcgtccctgtaatttgacgtatttttggttttcgtccctgtatctttttttgttataaaacagcccctataagttaataact 55947457  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||    
T  55947458 ttttgattttcgtccctcccgtcaacttccgttataaaaatgcacatgtggcaaatggaggatgatgtgg 55947527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 158 - 356
Target Start/End: Original strand, 53355100 - 53355315
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngtttt--aaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||| ||| ||||||        || ||  ||||||| ||||||||||||||||||||    
T  53355100 cttaaatatgtaaattgtccctgtaatttggtgtgttttttgtttttgtctctgtatttttttttgtgttctaaaacaacccctgtaagttaataacttt 53355199  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatga---------------cgtggcaaacttattgatgagt 340  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||    
T  53355200 ttgattttcgtccctcccgtcaactgccgttacaaaaacgcacatgtggcaaacggaggatgatgtggcagtgcatgacgtggcaaacttattgatgagt 53355299  T
Q  341 cacacagtgagaggga 356  Q
    ||||||||||||||||    
T  53355300 cacacagtgagaggga 53355315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 42978979 - 42978838
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||| ||||||||||| ||||||||||||| ||    
T  42978979 aggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaatccttgtaagttaataattt 42978880  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||| |||||||||||||||||||  || |||||||||||||    
T  42978879 tttgcttttcgtccctcccgtcaaactctgttacaaaaacgc 42978838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 48713522 - 48713381
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||| ||||||||||||||||| |    
T  48713522 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataacct 48713423  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||| ||||||||||||| |||||  || |||||||||||||    
T  48713422 tttgcttttcgtccctccagtcaaactctgttacaaaaacgc 48713381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 42977197 - 42977338
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||| |||||||| || | ||||||||||||||    
T  42977197 aggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccatttaagttaataactt 42977296  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||| |||||||||||||||||||  || |||||||||||||    
T  42977297 tttgcttttcgtccctcccgtcaaactctgttacaaaaacgc 42977338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 32082692 - 32082552
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||| ||||| || ||||||||||||||||||||    
T  32082692 ggcttaaatatgtaaatcgtccgtgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaataacccctgtaagttaataacttt 32082593  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||| ||||||||||||| |||||  || |||||||||||||    
T  32082592 ttgcttttcgtccctcctgtcaaactctgttacaaaaacgc 32082552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 54123606 - 54123464
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||| ||||||||  |||||||||||||||||    
T  54123606 taggcttaaatatgtaaatcgtccctgtaatttggcatgtttttggttttcgtccctgtatatttttttgttctaaaacaactcctgtaagttaataact 54123507  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||||||||||||||||||  || || ||||||||||    
T  54123506 ttttgcttttcgtccctcccgtcaaactctgtaacaaaaacgc 54123464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 10337106 - 10337272
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||| |||||||| ||||||||||||||||| ||||    
T  10337106 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaacccctgtaagttaataacctttt 10337205  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    | ||||| |||||||||||||  || |||||||| |||| | |||||| ||||| |  ||||||||||    
T  10337206 gcttttcatccctcccgtcaaactctgttacaaagacgc-cttgtggctaacggtgagtgacgtggca 10337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 10338226 - 10338087
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn--gttttaaaacaatccctgtaagttaataactttt 256  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||         |||||||||||| |||||||||||||||||||||    
T  10338226 ttaaatatgtaaatcgtccatgtaattttgcgtgtttttggtttttgtctctgtatctttttttttgttttaaaacaacccctgtaagttaataactttt 10338127  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    || |||||||||||||||||||  || |||||||||||||    
T  10338126 tgcttttcgtccctcccgtcaaactctgttacaaaaacgc 10338087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 54121825 - 54121967
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggc--gtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||| |   | ||||| |||||||||||||||||       ||| |||||||| ||||||||||||||||||    
T  54121825 ggcttaaatatgtaaatcgtccctgtaatttgacattttttttttgttttcgtccctgtatctttttttgttctaaaacaacccctgtaagttaataact 54121924  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||||||||||||||| ||  || |||||||||||||    
T  54121925 ttttgcttttcgtccctcccgttaaactctgttacaaaaacgc 54121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 48711860 - 48711998
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||       ||| ||||| || ||||| ||||| ||||| ||||    
T  48711860 cttaaatatgtaaatcgtccttgtaattttgcgtgttttttgttttcgtccttgtatctttttttgttctaaaataacccctgcaagttgataacatttt 48711959  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||| |||||||||  || |||||||||||||    
T  48711960 gattttcgtccttcccgtcaaactcggttacaaaaacgc 48711998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 19995809 - 19995745
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19995809 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 19995745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 44251908 - 44251972
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44251908 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 44251972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 53355404 - 53355468
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  53355404 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 53355468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 18597914 - 18597855
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18597914 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 18597855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 159 - 324
Target Start/End: Complemental strand, 22309194 - 22309029
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||| |||||||||| || |||||||||||||||| |||||||||||        || |||||||| ||||||||||||  | | |||||    
T  22309194 ttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatctttttttattctaaaacaacccctgtaagttataagcattttg 22309095  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggc 324  Q
     |||| |||| | ||||||   || ||||||||||||   ||||||||||||||||||||| ||||    
T  22309094 gttttagtccgtgccgtcataatcagttacaaaaacgtctatgtggcaaacggaggatgacatggc 22309029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 352
Target Start/End: Complemental strand, 39654731 - 39654532
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||| ||||   ||||||||| |||||||| |||||||||||||| ||||||         || |||||||| || ||||||||  |||| ||    
T  39654731 ggcttaaatatttaaaagatccctgtaagttggcgtgattttggttttcgtcactgtatttttttt--ttctaaaacaaaccatgtaagttgttaacctt 39654634  T
Q  256 ttgattttcgtccctcccgtcaacttcc----gttacaaaaacgcacatgtggcaaa-cggaggatgacgtggcaaacttattgatgagtcacacagtga 350  Q
    ||| |||||||||||||||| || |  |    || |||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||| |||    
T  39654633 ttggttttcgtccctcccgttaattagcatatgtaacaaaaacgcacatgtggcaaaacagaggatgacgtggcaaacttgatgatgagtcacacactga 39654534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 42889870 - 42889730
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||| ||  ||||||||| |||||||||| ||||||       ||| |||||||  || |||||||||  ||| |    
T  42889870 aggcttaaatatgtaaatcgtccctgtaagttcacgtgttttttgttttcgtccttgtatctttttttgttctaaaacagaccatgtaagttataaacat 42889771  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||| |||| |||||| |||||||| || |||||||||||||    
T  42889770 tttgcttttggtccctgccgtcaac-tctgttacaaaaacgc 42889730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 444 - 507
Target Start/End: Complemental strand, 55948691 - 55948631
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcat 507  Q
    ||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||    
T  55948691 tagctttcttcatcttcttccttccacctcttttacatcttcatc---gtcttcataaattcat 55948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 154 - 319
Target Start/End: Original strand, 22307669 - 22307834
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||| |||  |||||||||| || || ||||||||||||| |||||||||||       ||| |||||||| || |||||||||  | |     
T  22307669 taggcttaaatatgcaaaaggtccctgtaagttcgcatgtttttggttttagtccctgtatcgttttttgttctaaaacaacccttgtaagttataagca 22307768  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgac 319  Q
    ||||| |||| |||||| ||||||   || ||||||||||||   ||||||||||| |||||||||    
T  22307769 ttttggttttagtccctgccgtcataatctgttacaaaaacgtctatgtggcaaacagaggatgac 22307834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 249 - 352
Target Start/End: Original strand, 39637362 - 39637466
Alignment:
Q  249 taactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaactta-ttgatgagtcacacag 347  Q
    |||| ||||||||||||||||||| || | |||| |||| |||||||||||||||| |||| |||||||||||| |||||  |  ||||||||||||| |    
T  39637362 taaccttttgattttcgtccctcctgttagcttctgttataaaaacgcacatgtggtaaactgaggatgacgtgacaaacgaagctgatgagtcacactg 39637461  T
Q  348 tgaga 352  Q
    |||||    
T  39637462 tgaga 39637466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 24919052 - 24919143
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagtta 247  Q
    |||||||||||||||||||| ||||||| || ||||||||||||| ||||| ||||||||       ||| |||||||| ||||||||||||    
T  24919052 ggcttaaatatgtaaatcgtacctgtaagtttgcgtgtttttggtcttcgttcctgtatctttttttgttctaaaacaacccctgtaagtta 24919143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 38157023 - 38157077
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  38157023 ttaaatatgtaaatcatccctgtaagttcgcgtgtttttggttttcgtccctgta 38157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 54534976 - 54535034
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgt 212  Q
    |||| ||||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  54534976 taggtttaaatatgtaaatcgtccatgtaagttcgcgtgtttttggttttcgtccctgt 54535034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 21354837 - 21354723
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaa-tttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||   ||||||||| ||| ||||||||||| ||||||||||||||||       ||| |||||||| |||||||||||  |||||    
T  21354837 aggcttaaatatgtaaaagatccctgtaagtttcgcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgttaact 21354738  T
Q  254 ttttgattttcgtcc 268  Q
    ||||| |||| ||||    
T  21354737 ttttggttttagtcc 21354723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 19994673 - 19994713
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19994673 tgacgtggcaaacttattgatgagtcacacagtgagaggga 19994713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 19995938 - 19995898
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19995938 tgacgtggcaaacttattgatgagtcacacagtgagaggga 19995898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 9561854 - 9561905
Alignment:
Q  164 tatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  9561854 tatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtctctgtatc 9561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 39929414 - 39929274
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||    |||||||||||||       |||| ||||  |||| ||||||||| || |      
T  39929414 aggcttaaatatgtaaaacgtccatgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttactagccg 39929315  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    ||||   |||||||||||||| |||| ||||||||||||||    
T  39929314 tttgcaattcgtccctcccgttaactcccgttacaaaaacg 39929274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 33609402 - 33609344
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  33609402 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccttgtatc 33609344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 16880465 - 16880408
Alignment:
Q  239 tgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||| || ||||||||||||||||  || |||||||||||||    
T  16880465 tgtaagttaataactttttgcttatcgtccctcccgtcaaactctgttacaaaaacgc 16880408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 447 - 504
Target Start/End: Original strand, 39653499 - 39653556
Alignment:
Q  447 ctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaatt 504  Q
    ||||||||||||||||| |||||||| |||  ||||||||||||| ||||||||||||    
T  39653499 ctttcttcatcttcttcattccacctttttttcatcttcatcattatcttcataaatt 39653556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 55948816 - 55948779
Alignment:
Q  319 cgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||||||||||||||||||||    
T  55948816 cgtggcaaacttattgatgagtcacacagtgagaggga 55948779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 3068995 - 3069095
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaa 326  Q
    ||||||||||||||||| |||  ||  |||||||||||||||||||||| | | || |||||||||| ||  ||| ||| ||||| || |||||||||||    
T  3068995 taaaacaatccctgtaaattacaaatgttttgattttcgtccctcccgttagcatctgttacaaaaatgctgatgcggctaacggcggctgacgtggcaa 3069094  T
Q  327 a 327  Q
    |    
T  3069095 a 3069095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 16879226 - 16879298
Alignment:
Q  224 ttttaaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||| | || |||||| ||||||| ||||| |||||||||||||||||||  || |||||||||||||    
T  16879226 ttttaaaaccacccttgtaaggtaataaccttttgcttttcgtccctcccgtcaaaatctgttacaaaaacgc 16879298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 44253058 - 44253018
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44253058 tgacgtggcaaacttattgatgaggcacacagtgagaggga 44253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 54536753 - 54536697
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| |||| ||||||    
T  54536753 ttaaatatgtaaatcgtccctgtaaattcgcgtgttcttggtttttgtccatgtatc 54536697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 7499360 - 7499415
Alignment:
Q  160 taaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||| ||||| |||| |||| |||||||||| ||||||||||||||||    
T  7499360 taaatatgtaaagcgtccttgtagtttgacgtgtttttgcttttcgtccctgtatc 7499415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 4906128 - 4906186
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  4906128 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4906186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 4931998 - 4932055
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  4931998 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 313
Target Start/End: Original strand, 33607471 - 33607625
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||  ||| |||||| || ||||||||||||||||||||| ||||||        || |||||||| |||||||||||   ||| |||||    
T  33607471 ttaaatatgtaaaaggtctctgtaagttcgcgtgtttttggttttcgtccttgtatcttttttttttctaaaacaaaccctgtaagttgtaaacattttg 33607570  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggag 313  Q
     |||| ||||||  ||| ||| || |||| ||||||||  |  ||||||||||||    
T  33607571 gttttagtccctaacgttaacatctgttagaaaaacgcttagctggcaaacggag 33607625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 4933391 - 4933335
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctg 211  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||    
T  4933391 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 29756271 - 29756327
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctg 211  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||    
T  29756271 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 29756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 348
Target Start/End: Original strand, 55947553 - 55947585
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagt 348  Q
    |||||||||||||||||||||||||||||||||    
T  55947553 tgacgtggcaaacttattgatgagtcacacagt 55947585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 4907520 - 4907465
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctg 211  Q
    ||||||||||||||||  |||||||||| || |||  |||||||||||||||||||    
T  4907520 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 29757669 - 29757610
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  |||||||||| ||  ||  |||||||||||||||||||||    
T  29757669 taggcttaaatatgtaaaaggtccctgtaagttcacgcatttttggttttcgtccctgta 29757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 42226776 - 42226721
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    |||||||||||||| ||||||||| |||||| ||||||| |||||| ||| |||||    
T  42226776 ttaaatatgtaaattgtccctgtagtttggcctgttttttgttttcttccatgtat 42226721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 55019418 - 55019359
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||| |||| |||||||| |||  ||||| |||||| ||||||||    
T  55019418 taggcttaaatatgtaaatggtccttgtaatttcgcgcattttttgttttcttccctgta 55019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 55017743 - 55017781
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgttttt 197  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  55017743 ttaaatatgtaaatcgtccctgtaagttcgcgtgttttt 55017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 11148344 - 11148397
Alignment:
Q  150 aaagtaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 203  Q
    |||||||||||||||| |||||  |||||||||| || ||| ||||||||||||    
T  11148344 aaagtaggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttt 11148397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 39927931 - 39927992
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||||    |||||||||||||    
T  39927931 taggctttaatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 39927992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 47865353 - 47865296
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| |||| |||||||||||  || ||||| ||||||||||||||    
T  47865353 ggcttaaatatgcaaaccgtcactgtaatttgggctgattttgattttcgtccctgta 47865296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 45276827 - 45277105
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45276827 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatcttaacactaaaatccacaatgttc 45276926  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276927 atagtcccaactaaaattttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 45277026  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  45277027 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctg 45277105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 561 - 839
Target Start/End: Complemental strand, 31393268 - 31392990
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31393268 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 31393169  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31393168 atagtctcaactaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaatttccaatattgaaaaaattcaca 31393069  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  31393068 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctg 31392990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 561 - 838
Target Start/End: Complemental strand, 8231232 - 8230954
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8231232 tcatcatctcattctcaatagacaacttctcacaaacccaaacaaaatctccattgacaatggtcagattgacatctcaacactaaaattcacaatgttc 8231133  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8231132 atagtctcaaataaacttttattgttaatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 8231033  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctct 838  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  8231032 aaattctcaaattgaaaaacctaaagaatgatttttttttcattaccaactctcgtctcatcattgatctcgcatctct 8230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 21716259 - 21715994
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  21716259 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaa----- 21716165  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716164 ----------ctaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 21716075  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  21716074 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 21715994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 561 - 837
Target Start/End: Complemental strand, 32882329 - 32882053
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  32882329 tcatcatctcactctcaatggacaacttctcacaaactcaaacaaaac-cccattgactatggtcaaattgacatctcaacactaaaatccacaatgttc 32882231  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||| ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32882230 atagtccgaactaattttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaactcccaatattgaaaaaattcaca 32882131  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctc 837  Q
    ||||||| |||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||    
T  32882130 aaattctaaaattgaaaaacctaaagaatgatttttttttcattacaaactctcgtctcatcattgatctcgcatctc 32882053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 40028893 - 40029155
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40028893 tcatcatctcactctcaatagacaacttctcacaaaaccaaacaaaatcctcattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 40028992  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||                  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  40028993 ata------------------ttgataatatcaaaatcaaattataacaacaaaatcctcattatgaatgctcgaatttccaatattg-aaaaattcaca 40029073  T
Q  761 aaattctcaaattgaaaaacctaaagaatga---nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||||    
T  40029074 aaattctcaaattgaaaaacctaaagaatgatttttttttttcattaccaactctcgtctcatcattgatctcacatctctg 40029155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 21716680 - 21716509
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  21716680 taggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaatccctgtaagttaataact 21716581  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716580 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 21716509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 154 - 323
Target Start/End: Original strand, 21715070 - 21715239
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||||||||| |||||||||||||    
T  21715070 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgattttcgtccctgtatctttttttgttttaaaacaatccctataagttaataact 21715169  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21715170 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggacgatgacgtgg 21715239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 156 - 322
Target Start/End: Complemental strand, 45278026 - 45277860
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||| |||||||||||||||    
T  45278026 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttttaaaacaacccctataagttaataacttt 45277927  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45277926 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggacgatgacgtg 45277860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 31392052 - 31392225
Alignment:
Q  150 aaagtaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaat 249  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       ||| |||||||| |||| |||||||||    
T  31392052 aaagaaggcttaaatatgtaaatcgtccctgtaatttgacgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaat 31392151  T
Q  250 aactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31392152 aactttttgattttcgtccctcccgccaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 31392225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 157 - 322
Target Start/End: Complemental strand, 8231692 - 8231527
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||       ||| |||||||| |||||||||||||||||||||    
T  8231692 gcttaaatatgtaaatcgtccctgtaatttggcttgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactttt 8231593  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8231592 tgattttcgtcactcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 8231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 8230069 - 8230237
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||| |||||||| |||| ||||||||||||||    
T  8230069 aggcttaaatatgtaaatcgtccctgtaatttggtgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactt 8230168  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8230169 ttttattttcgtccctctcgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 8230237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 31393719 - 31393555
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||| |||||||| |||||||||||||||||||    
T  31393719 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttttgttataaaacaacccctgtaagttaataactt 31393620  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgac 319  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31393619 tttaattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgac 31393555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 159 - 325
Target Start/End: Original strand, 40028460 - 40028626
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||| |||| |||||||||||||||||     
T  40028460 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataactttttt 40028559  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  40028560 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaagatgacgtggca 40028626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 45276409 - 45276578
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||       ||| |||||||| |||||||||||||||||||    
T  45276409 aggcttaaatatgtagatcgtcc-tgtaatttggcgagtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactt 45276507  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276508 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 45276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 154 - 323
Target Start/End: Complemental strand, 40030090 - 40029921
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||        ||| |||||||| | || ||||||| |||||    
T  40030090 taggcttaaatatgtaaatcgtccctgtaatttggcgtgttttttgttttcatccctgtatatttttttgttctaaaacaacctctataagttagtaact 40029991  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40029990 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacgaaggatgacgtgg 40029921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 171 - 323
Target Start/End: Complemental strand, 4675840 - 4675689
Alignment:
Q  171 atcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgattttcgtccct 270  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||       ||| |||||||| | || ||||||||||||||||||||||||||||||    
T  4675840 atcgtccctgtaatttggcgtgtttttgattttcgtccatgtatctttttt-gttctaaaacaaccactataagttaataactttttgattttcgtccct 4675742  T
Q  271 cccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  4675741 cccgtcaacttccgttacaaaaacgcacatgcggcaaacagaggatgacgtgg 4675689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 32882774 - 32882605
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||        ||| |||||||| || | ||||||||| ||||    
T  32882774 aggcttaaatatgtaaatcgtccctgtaatttg-catgtttttggtttttgtccatgtatattcttttgttctaaaacaacccttataagttaatgactt 32882676  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  32882675 tttgattttcgtcccttccgtcaacttccgttacaaaaacgcacatgtggcaaacataggatgacgtggca 32882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 159 - 323
Target Start/End: Original strand, 32881119 - 32881283
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||| || | ||||||||||| | ||||| ||||| || | ||||||       ||| |||||||| |||| ||||||||||||||||||    
T  32881119 ttaaatatgtaaattgttcttgtaatttggcatattttttgttttagttcatgtatctttttttgttctaaaacaacccctataagttaataactttttg 32881218  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32881219 attttcgtccctcccatcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 32881283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 46245122 - 46245262
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| ||||||||||||||||||||    
T  46245122 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataacttt 46245221  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46245222 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 46245262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 46246636 - 46246497
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||| ||||||    
T  46246636 taggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataact 46246537  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||| |||||||||| ||||||||||| |||| |||||    
T  46246536 ttttgaatttcgtccctaccgtcaacttctgttaaaaaaa 46246497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 14774515 - 14774652
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||| ||||| |||| || || ||||||| |||||||||| ||||||       ||| |||||||| ||||| ||||||||||||||||    
T  14774515 cttaaatatgtaaattgtccccgtaagttcgcatgttttttgttttcgtccgtgtatcattttt-gttctaaaacaacccctgcaagttaataacttttt 14774613  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14774614 gattttcgtccctcccgtcaacttccgttacaaaaacgc 14774652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 15224968 - 15225105
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||| ||||| |||| || || ||||||| |||||||||| ||||||       ||| |||||||| ||||| ||||||||||||||||    
T  15224968 cttaaatatgtaaattgtccccgtaagttcgcatgttttttgttttcgtccgtgtatcattttt-gttctaaaacaacccctgcaagttaataacttttt 15225066  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15225067 gattttcgtccctcccgtcaacttccgttacaaaaacgc 15225105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 12180700 - 12180559
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||| |||||||| ||| |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||||  |||     
T  12180700 taggctaaaatatgttaattgtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaacg 12180601  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  12180600 ttttgattttcgtccctcccgtcagcatctgttacaaaaacg 12180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 21716375 - 21716311
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716375 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 21716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 324
Target Start/End: Complemental strand, 13420347 - 13420177
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||| |||||||||||       ||| |||||||| ||||||||||||  | |     
T  13420347 taggcttaaatatgtaaatggcccctgtaagtttgcgtgtttttggttttagtccctgtatctttttttgttctaaaacaacccctgtaagttataagca 13420248  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggc 324  Q
    ||||| |||| |||||| ||||||   |||||||||||||||   |||||||||||||| |||||| ||||    
T  13420247 ttttggttttagtccctgccgtcataatccgttacaaaaacgtctatgtggcaaacggatgatgacatggc 13420177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 15137000 - 15136859
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||| |||||||||||||||| || ||||||||||| ||||||||| || |||       ||| |||||||| || || ||||||||||||    
T  15137000 taggcttaaatatataaatcgtccctgtaaattcgcgtgtttttgattttcgtccttgaatctttttttgttctaaaacaacccttgcaagttaataact 15136901  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||| |||| |||||||||||| |||| ||||||||    
T  15136900 ttttgattttcatccc-cccgtcaacttctgttaaaaaaacgc 15136859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 8231368 - 8231304
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8231368 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 8231304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 32882452 - 32882388
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32882452 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 32882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 40028779 - 40028843
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40028779 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 40028843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 45276713 - 45276777
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45276713 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 45276777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 37133709 - 37133570
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||       ||| |||||||| ||| | ||||||  ||| |    
T  37133709 aggcttaaatatgtaaatcgtccccgtaagttcgcgtgtttttggttttcgtcactgtatctttttttgttctaaaacaacccccggaagttataaacgt 37133610  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    |||| ||||||| |||||| |||| |||||||||||||||    
T  37133609 tttggttttcgttcctcccttcaatttccgttacaaaaac 37133570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 31393397 - 31393333
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  31393397 tagctttcttcatcttcttccttccacctcttttacatctccatcattgtcttcataaattcatc 31393333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 11671347 - 11671208
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| |||||||||||||||||||| |||| || |||||||||| |||||||||| ||||||       ||| |||||||| ||||||||||||  ||      
T  11671347 taggtttaaatatgtaaatcgtccccgtaagttcgcgtgttttttgttttcgtccatgtatctatttttgttctaaaacaaaccctgtaagttacaaatg 11671248  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||||||||||||||| ||||| | || ||||||||||    
T  11671247 ttttgattttcgtccctctcgtcagcatctgttacaaaaa 11671208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 12178482 - 12178652
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||| ||| || ||||||||||||||||||||||||||||       ||| |||||||| | |||||||||  ||||||    
T  12178482 aggcttaaatatgtaaaaggtccctctaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaactctgtaagttgttaactt 12178581  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||| |||| ||||||  ||| |||||| |||| ||||||||  ||||| | ||||| || || |||||||    
T  12178582 tttggttttagtccctaacgttaacttctgttaaaaaaacgctgatgtgtctaacggtggctggcgtggca 12178652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 15135449 - 15135518
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15135449 taaaacaacccctgcaagttaataactttttgattttcgtccctcccgtcaacttttgttacaaaaacgc 15135518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 37131836 - 37131972
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    |||||||||||||||||||||  |||| || |||||| |||||||||||| ||||||||       ||| ||||| ||  | |||||||||  ||| |||    
T  37131836 gcttaaatatgtaaatcgtccacgtaagttcgcgtgtgtttggttttcgttcctgtatctttttttgttctaaaataactcatgtaagttataaacgttt 37131935  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    || ||||||||||| ||||||||||||||||||||||    
T  37131936 tggttttcgtcccttccgtcaacttccgttacaaaaa 37131972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 30792896 - 30792749
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttg--gttttcgtccctgtatcnnnnnnngttt----taaaacaatccctgtaagttaa 248  Q
    |||||||||||||||||||| | ||||||||||||||||||||   |||||| ||| ||||||        |||    |||||||| |||||||||||||    
T  30792896 aggcttaaatatgtaaatcgactctgtaatttggcgtgttttttttgttttcttccatgtatcttattttttttcttctaaaacaacccctgtaagttaa 30792797  T
Q  249 taactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||| |||||||||||||||||||  |  |||||||||||||    
T  30792796 taactttttgcttttcgtccctcccgtcaaactttgttacaaaaacgc 30792749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 11747398 - 11747532
Alignment:
Q  162 aatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgatt 261  Q
    |||||||||| | |||| |||| || ||| |||||| |||||| ||||||||||       || |||||||||  ||   |||||||||| |||||||||    
T  11747398 aatatgtaaaccatcccggtaaattcgcgcgttttttgttttcatccctgtatccctttttgtcttaaaacaactccaacaagttaataattttttgatt 11747497  T
Q  262 ttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | ||||||||||||| |||||||||||||||||||    
T  11747498 tccgtccctcccgtctacttccgttacaaaaacgc 11747532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 11669841 - 11669982
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||  |||||||||| || || |||||||||||||||||| ||||         ||| ||||||   |||||||||||  |||| ||    
T  11669841 ggcttaaatatgtaaacggtccctgtaagttcgcatgtttttggttttcgtccatgtaagtttttttgttctaaaactcaccctgtaagttgttaacctt 11669940  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgca 297  Q
    |||||||| ||||||  ||| |||||||||||||||||||||    
T  11669941 ttgattttagtccctaacgttaacttccgttacaaaaacgca 11669982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 706741 - 706800
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  706741 taggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgta 706800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 324
Target Start/End: Original strand, 37348735 - 37348903
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||| ||||||| ||||| |||| || |||||||||||||||| |||||| ||||       ||| ||||||||||| |||||||||  ||| ||    
T  37348735 ggcttaaatttgtaaatggtccccgtaagttcgcgtgtttttggttttagtccctatatcattttttgttctaaaacaatccttgtaagttataaacgtt 37348834  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggc 324  Q
    ||| |||| |||| | ||||||   || |||||||||| |   |||||| |||||||||||||| ||||    
T  37348835 ttggttttagtccatgccgtcattatctgttacaaaaatgtctatgtggaaaacggaggatgacatggc 37348903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 43546791 - 43546651
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    ||||||||||||        |||||||||  |||| ||||||||| || |     
T  43546791 taggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatttttttttgttttaaaatcatccttgtaagttactagcc 43546692  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
     ||||   |||||||||||||| |||| |||||||||||||    
T  43546691 gtttgcaattcgtccctcccgttaactcccgttacaaaaac 43546651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 21914699 - 21914638
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  21914699 taggcttacatatgcaaaccgtccctgtaatttggtgtgtttttggttttcgtccctatatc 21914638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 21716503 - 21716463
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21716503 tgacgtggcaaacttattgatgagtcacacagtgagaggga 21716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 31393525 - 31393485
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31393525 tgacgtggcaaacttattgatgagtcacacagtgagaggga 31393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 40029913 - 40029873
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40029913 tgacgtggcaaacttattgatgagtcacacagtgagaggga 40029873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 45276584 - 45276624
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45276584 tgacgtggcaaacttattgatgagtcacacagtgagaggga 45276624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 708213 - 708154
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| ||||    
T  708213 taggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccatgta 708154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 40028651 - 40028689
Alignment:
Q  317 gacgtggcaaacttattgatgagtcacacagtgagaggg 355  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40028651 gacgtggcaaacttattgatgagtcacacagtgagaggg 40028689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 28848556 - 28848617
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    |||||||||||||    
T  28848556 taggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 28848617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 3704397 - 3704457
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||| ||||||||||| ||||| || || |||||||||||||||||||| ||||    
T  3704397 aggcttaaataggtaaatcgtccatgtaagttcgcttgtttttggttttcgtccctttatc 3704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 8231500 - 8231460
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  8231500 tgacgtggcaaacttattgatgagtcacccagtgagaggga 8231460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 9532602 - 9532534
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||||||| ||| |||| |||||||||||||| |||||||||||||| ||||  || ||||||||||||    
T  9532602 taaaacaaccccagtaaattaataactttttgcttttcgtccctcccatcaaactctgttacaaaaacg 9532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 21715265 - 21715305
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21715265 tgacgtggaaaacttattgatgagtcacacagtgagaggga 21715305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 25008091 - 25008151
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    |||||||||||||    
T  25008091 aggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 25008151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 32882581 - 32882541
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  32882581 tgacgtgacaaacttattgatgagtcacacagtgagaggga 32882541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 31734728 - 31734685
Alignment:
Q  242 aagttaataactttttgattttcgtccctcccgtcaacttccgt 285  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  31734728 aagttaataaatttttgattttcgttcctcccgtcaacttccgt 31734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 32429930 - 32429872
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||| |||||  |||||||||| |||||| |||||||||||| |||||||||    
T  32429930 aggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 32429872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 41591514 - 41591572
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  ||||||||||||| |||  ||||| |||||||||||||||    
T  41591514 aggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 41591572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 31734815 - 31734766
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 203  Q
    |||||||||| ||||||||||||| ||||| || ||||||||||||||||    
T  31734815 taggcttaaacatgtaaatcgtccttgtaagttcgcgtgtttttggtttt 31734766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 38758378 - 38758317
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||| |||||  |||||||||| || ||| |||||||||||| |||||||||||    
T  38758378 taggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtccctgtatc 38758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 4675663 - 4675623
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  4675663 tgacgtggcaaacttattgattattcacacagtgagaggga 4675623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 348
Target Start/End: Original strand, 8230245 - 8230277
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagt 348  Q
    |||||||||||||||||||||||||||||||||    
T  8230245 tgacgtggcaaacttattgatgagtcacacagt 8230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 9532681 - 9532621
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||||||| |||||| ||||||||| ||| |||||| |||||| |||| |||    
T  9532681 taggcttaaatatgtaagtcgtccttgtaatttgacgtatttttgattttcggccctatat 9532621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 25009545 - 25009485
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||| |||||||||| |||||||||||||| |||||||||||    |||||||||||||    
T  25009545 aggctttaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 25009485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 31392251 - 31392291
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  31392251 tgacgtagcaaacttattgatgaggcacacagtgagaggga 31392291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 41385871 - 41385811
Alignment:
Q  153 gtaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||||| |||||||||| || |||  ||||| ||||| |||||||||    
T  41385871 gtaggcttaaatatgtaaatggtccctgtaagttcgcgcattttttgttttggtccctgta 41385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 45277833 - 45277793
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  45277833 tgacgtggaaaacttattgatgagtcacacagtaagaggga 45277793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 27162056 - 27161997
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  |||||||||| || ||| | ||||||||||||||| ||||    
T  27162056 taggcttaaatatgtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgta 27161997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 21914413 - 21914451
Alignment:
Q  240 gtaagttaataactttttgattttcgtccctcccgtcaa 278  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  21914413 gtaagttaataactttttgtttttcgttcctcccgtcaa 21914451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 4706634 - 4706691
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||   | ||||| ||||||||||||||    
T  4706634 ggcttaaatatgcaaaccgtccctgtaatttgggcggattttgattttcgtccctgta 4706691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 4707527 - 4707470
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| |||||||||||||||   || ||||| ||||||||||||||    
T  4707527 ggcttaaatatgcaaaccgtccctgtaatttgagctgattttgattttcgtccctgta 4707470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11748940 - 11748887
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaact 280  Q
    |||||||| || | |||||| |||||||||||| |||||||||| |||||||||    
T  11748940 taaaacaaaccttataagttgataactttttgaatttcgtccctaccgtcaact 11748887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 21895366 - 21895423
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtg-tttttggttttcgtccct 210  Q
    ||||||||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||    
T  21895366 taggcttaaatatgtaaatcgactttgtaatttggtgtgtttttttgttttcgtccct 21895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 28556246 - 28556303
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||  ||  ||||||||| |||||||||||||||| ||| |||||    
T  28556246 ggcttaaatatgtaaaaggtatctgtaatttagcgtgtttttggttttagtctctgta 28556303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 41593262 - 41593205
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||| |||||||||| || | |  ||||||||||| |||||||||    
T  41593262 ggcttaaatatgtaaatggtccctgtaagttcgtgcatttttggttttggtccctgta 41593205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 43545340 - 43545401
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||||    |||||||||||||    
T  43545340 taggctttaatatgcaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 43545401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 33734158 - 33733875
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33734158 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 33734059  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33734058 atagtcccaactaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 33733959  T
Q  761 aaattctcaaattgaaaaacctaaagaatga---nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  33733958 aaattctcaaattgaaaaacctaaagaatgatttttttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 33733875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 53528398 - 53528678
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53528398 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattccaattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 53528497  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53528498 atagtcccagctaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 53528597  T
Q  761 aaattctcaaattgaaaaacctaaagaatga--nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  53528598 aaattctcaaattgaaaaacctaaagaatgattttttttttcattaccaactctcgtctcatcattgatctcgcatctctg 53528678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 159 - 356
Target Start/End: Complemental strand, 33734558 - 33734361
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || ||||||||       ||| |||||||| |||||||||||||||||||||||    
T  33734558 ttaaatatgtaaatcgtccctgtaatttagcgtgtttttggttttggttcctgtatctttttttgttctaaaacaacccctgtaagttaataactttttg 33734459  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33734458 attttcgtccctcccatcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacgtggcaaacttattgatgagtcacacagtgagaggga 33734361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 53527969 - 53528139
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||       ||| ||||||||  ||||||||||||||||||    
T  53527969 aggcttaaatgtgtaaatcgtccctttaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaactcctgtaagttaataactt 53528068  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  53528069 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacagaggatgacgtggca 53528139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 155 - 322
Target Start/End: Original strand, 33732964 - 33733131
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        ||| |||||||| |||| ||||||||||||||    
T  33732964 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgttcctgtatttttttttgttctaaaacaacccctataagttaataactt 33733063  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33733064 tttgattttcgtccttcccgtcaacttccgttacaaaaacgcacatgtggcaaacggacgatgacgtg 33733131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 155 - 356
Target Start/End: Complemental strand, 53529594 - 53529378
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||       ||| ||||| |  |||| ||||||||||||||    
T  53529594 aggcttaaatatgtaaatcgtccctgtaatttggcgtatttttagttttcgtccctgtatctttttttgttctaaaatagcccctataagttaataactt 53529495  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatg---------------acgtggcaaacttattgatgag 339  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||               ||||||||||||||||||||||    
T  53529494 tttgattttcgtccctcccgtcaacttccgttacaaaaatgcacatgtggcaaacggaggatgatgtggtagtgcctaacgtggcaaacttattgatgag 53529395  T
Q  340 tcacacagtgagaggga 356  Q
    |||||||||||||||||    
T  53529394 tcacacagtgagaggga 53529378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 31796893 - 31796753
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| ||||||||||||||||||||    
T  31796893 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataacttt 31796794  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31796793 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 31796753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 40499312 - 40499171
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| ||| |||||||||||||||    
T  40499312 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaaccccggtaagttaataactt 40499213  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40499212 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 40499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 41083332 - 41083189
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttttaaaacaatccctgtaagttaataac 252  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||        ||| |||||||| |||||||||||||||||    
T  41083332 taggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccccgtatcttttttttgttctaaaacaacccctgtaagttaataac 41083233  T
Q  253 tttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41083232 tttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 41083189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 48568589 - 48568449
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||  ||| |||||| || |||||||||||||||||||||| ||||        ||| |||||||| ||||||||||||||||||||    
T  48568589 ggcttaaatatgtaaaaggtctctgtaagttcgcgtgtttttggttttcgtccccgtatttttttttgttctaaaacaacccctgtaagttaataacttt 48568490  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48568489 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 48568449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 31656956 - 31657094
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnn-gttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||         ||| |||||||||||||||||||||||||||||||    
T  31656956 ttaaatatgtaaatcgtccctgtaatttggcatgtttttggttttcgtccttgtattttttttttgttctaaaacaatccctgtaagttaataacttttt 31657055  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | |||||||||||||||||||  || |||||||||||||    
T  31657056 gcttttcgtccctcccgtcaaactctgttacaaaaacgc 31657094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 41081801 - 41081939
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||| |||||||    
T  41081801 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataactt 41081900  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    ||||| |||||||||| ||||||||||| |||| |||||    
T  41081901 tttgaatttcgtccctaccgtcaacttctgttaaaaaaa 41081939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 48566995 - 48567133
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || |||||||||||||||||||| |||||||       ||| |||||||| ||||||||||| |||||||    
T  48566995 aggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtcactgtatctttttttgttctaaaacaaaccctgtaagttgataactt 48567094  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    ||||| |||||||||| ||||||||||| |||| |||||    
T  48567095 tttgaatttcgtccctaccgtcaacttctgttaaaaaaa 48567133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 31795356 - 31795510
Alignment:
Q  139 actcatgaaagaaagtaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccc 238  Q
    |||||| ||| ||| | |||||||||| |||||  |||||||||| || |||||||||||||||||| |||||||||       ||| |||||||| |||    
T  31795356 actcataaaaaaaaattggcttaaatacgtaaaaggtccctgtaagttcgcgtgtttttggttttcggccctgtatctttttttgttctaaaacaaaccc 31795455  T
Q  239 tgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| |||| |||||    
T  31795456 tgtaagttgataactttttgaatttcgtccctaccgtcaacttctgttaaaaaaa 31795510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 33734272 - 33734208
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33734272 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 33734208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 53528277 - 53528338
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  53528277 tagctttcttcatcttcttccttccacctcttttacatcttcatc---gtcttcataaattcatc 53528338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 159 - 293
Target Start/End: Original strand, 30700299 - 30700433
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||||||| || ||| || ||||||||||||||||||||| ||||||       ||| |||||||  ||||||||||||  ||| |||||    
T  30700299 ttaaatatgtaaatcgtctctttaagttcgcgtgtttttggttttcgtccttgtatctttttttgttctaaaacacaccctgtaagttataaacattttg 30700398  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaa 293  Q
     |||| |||||| |||||| | || ||||||||||    
T  30700399 cttttggtccctgccgtcagcatctgttacaaaaa 30700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 41879922 - 41880036
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| |||||||||||||||||  |||||| || | |||||||||||||||||| |||||||       ||| |||||||| || |||||||||  |||     
T  41879922 taggtttaaatatgtaaatcgtttctgtaagttcgtgtgtttttggttttcgtctctgtatctttttttgttctaaaacaaaccttgtaagttataaacg 41880021  T
Q  254 ttttgattttcgtcc 268  Q
    |||||||||||||||    
T  41880022 ttttgattttcgtcc 41880036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 22942339 - 22942394
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||||||||||||||| || || |||||||||||||| |||||||||    
T  22942339 ttaaatatgtaaatcgtccctgtaagttcgcttgtttttggttttcatccctgtat 22942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 32558917 - 32558976
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  |||||||||| || |||||||||| |||||||||||||||    
T  32558917 taggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtccctgta 32558976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 33733158 - 33733198
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  33733158 tgacgtgacaaacttattgatgagtcacacagtgagaggga 33733198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 53528148 - 53528188
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  53528148 tgacgtggcaaacttattgatgagtcacacggtgagaggga 53528188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 8391400 - 8391443
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttg 198  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  8391400 aggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttg 8391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 294
Target Start/End: Complemental strand, 32615702 - 32615566
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc-nnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||||||||  |||||||||| || |||||||||| ||||| ||||||||| |        ||| ||||||||  | ||||||||  |||||||||    
T  32615702 ttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgtttttgtccctgtaacttttttttgttctaaaacaaatcatgtaagttgttaacttttt 32615603  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    |||||| ||||||  ||| ||||||||||| ||||||    
T  32615602 gattttagtccctaacgtaaacttccgttaaaaaaac 32615566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 45981406 - 45981546
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||    |||||| ||||||       |||| ||||  |||| ||||||||| || |      
T  45981406 aggcttaaatatgtaaaacgtccttgtaatttcgcgtgtttttgcaaatcgtccttgtatctttttttgtttcaaaatcatccttgtaagttactagccg 45981505  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    ||||   |||||||||||||| |||| ||||||||||||||    
T  45981506 tttgcaattcgtccctcccgttaactcccgttacaaaaacg 45981546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 31199249 - 31199306
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||| ||||||||||  ||||||||||||| |||| |||| ||||||||||||||||    
T  31199249 ggcttgaatatgtaaaaggtccctgtaatttcgcgtattttaggttttcgtccctgta 31199306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 3150080 - 3150020
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||||||||  |||||||||| ||  || |||||||||||| ||||||||||    
T  3150080 taggcttaaatatgtaaaaggtccctgtaagttaacgcgtttttggttttagtccctgtat 3150020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 3026941 - 3026883
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||| |||||  |||||||||| |||||  |||||||||||| |||||||||    
T  3026941 aggcttaaataagtaaaaggtccctgtaagttggcacgtttttggttttagtccctgta 3026883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 32613883 - 32613941
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaat-ttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||  |||| |||||  || ||||||||||||||||||||||||||    
T  32613883 ggcttaaatatgtaaaaggtccttgtaaagttcgcgtgtttttggttttcgtccctgta 32613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 33780656 - 33780714
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||| |||||||  |||||||||| || |||| ||||| |||||||||||||||    
T  33780656 aggcttaaaaatgtaaaatgtccctgtaagttcgcgtattttttgttttcgtccctgta 33780714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 20289649 - 20289592
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  20289649 ggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 20289592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 30701900 - 30701847
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 208  Q
    |||||||||||||||||||   ||| ||| || |||||||||||||||||||||    
T  30701900 aggcttaaatatgtaaatcactcctttaagttcgcgtgtttttggttttcgtcc 30701847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 32559946 - 32559885
Alignment:
Q  152 agtaggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||||  ||| |||||| || ||||||||||  ||||| ||||||||    
T  32559946 agtaggcttaaatatgtaaaaggtctctgtaagttcgcgtgttttttattttcatccctgta 32559885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-128; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 30333646 - 30333368
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30333646 tcatcatctccctctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 30333547  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30333546 atagtccc-actaaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattg-aaaaattcaca 30333449  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  30333448 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 30333368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 561 - 841
Target Start/End: Original strand, 1417833 - 1418114
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1417833 tcatcatctcactctcaatagacaacttctcacaaacccaatcaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 1417932  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1417933 atagtcctaaataaacttttattgataatatcaaaatcaaattataacaacaaaatcctcactgtgaatgctcgaattcccaatattgaaaaaattcaca 1418032  T
Q  761 aaattctcaaattgaaaaacctaaagaatga-nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  1418033 aaattctcaaattgaaaaacctaaagaatgatttttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 1418114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 561 - 839
Target Start/End: Original strand, 25915115 - 25915398
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915115 tcatcatctcactctcaatagacaacttcccacaaacccaaacaaaatccccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 25915214  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25915215 atagtcccagctaaacttttattgataatatcaaaatcaaatcataacaacaaaatcctcattgtgaatgctcaaattcccaatattgaaaaaattcaca 25915314  T
Q  761 aaattctcaaattg-aaaaacctaaagaatga----nnnnnnnncattaccaactctcgtctcatcattgatctcgcatctctg 839  Q
    |||||||||||||| |||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||    
T  25915315 aaattctcaaattgaaaaaacctaaagaatgattttttttttctcattaccaactctcgtctcatcattgatctcgcatctctg 25915398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 156 - 323
Target Start/End: Complemental strand, 1418995 - 1418828
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||       ||| |||||||| |||| |||||||||||||||    
T  1418995 ggcttaaatatgtaaatcgtccctgtaatttgacgtgttttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataacttt 1418896  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1418895 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgcggcaaacggaggatgacgtgg 1418828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 30332283 - 30332452
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||       ||| |||||||| |||| |||||||||||||||    
T  30332283 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatctttttttgttctaaaacaacccctataagttaataacttt 30332382  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30332383 ttgattttcgtccctcctgtcaacttccgttacaaaaacgcacatgtggaaaacggaggatgacgtggca 30332452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 30334067 - 30333898
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||       ||| |||||||| |||||||||||||||||||    
T  30334067 aggcttaaatatgtaagtcgtccctataatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataactt 30333968  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  30333967 tttgattttcgtccctcccgtcaacttccattac-aaaacgcacatgtggcaaacggaggatgacatggca 30333898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 158 - 323
Target Start/End: Complemental strand, 25916335 - 25916170
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||       ||| |||||||| |||| |||||||||||||||||    
T  25916335 cttaaatatgtaaatcgtccatgtaatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctataagttaataacttttt 25916236  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  25916235 aattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggtaaacggaggatgatgtgg 25916170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 25914493 - 25914659
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||| |||||||||   ||||||||||||||||||| |||| ||||  ||||||       |||||||||||| |||||| |||||||||||||||    
T  25914493 cttaaatacgtaaatcgttaatgtaatttggcgtgttttttgtttccgtctttgtatctttttt-gttttaaaacaacccctgttagttaataacttttt 25914591  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25914592 tattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 25914659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 38624715 - 38624856
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| |||| ||||||||||||||    
T  38624715 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctataagttaataactt 38624814  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38624815 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 38624856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 17555063 - 17554925
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt-cgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||| |||| ||||| || |||||||||||||||| |||||||||||        ||| |||||||| ||||| |||||||||||||    
T  17555063 ggcttaaatatgtaaattgtccatgtaagttcgcgtgtttttggtttttcgtccctgtattattttttgttctaaaacaacccctgcaagttaataactt 17554964  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17554963 tttgattttcgtccctcccgtcaacttccgttacaaaaa 17554925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 236 - 356
Target Start/End: Original strand, 1417491 - 1417626
Alignment:
Q  236 ccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggagga---------------tgacg 320  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||               |||||    
T  1417491 ccctgtaagttaataacttttttattttcgtccctcccgtcaacttccgttacaataccgcacatgtggcaaacggaggatgacgggacagtgtctgacg 1417590  T
Q  321 tggcaaacttattgatgagtcacacagtgagaggga 356  Q
    ||||||||||||||||||||||||||||||||||||    
T  1417591 tggcaaacttattgatgagtcacacagtgagaggga 1417626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 8874333 - 8874196
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||        ||| |||||||| ||||||||||||||||||||    
T  8874333 ggcttaaatatgtaaatcgtccctgtaatttgacctgtttttggttttcgtccctgtatatttttttgttctaaaacaacccctgtaagttaataacttt 8874234  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    ||| |||| ||||||| ||||||  || ||||||||||    
T  8874233 ttgctttttgtccctctcgtcaaactctgttacaaaaa 8874196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 157 - 296
Target Start/End: Original strand, 39101716 - 39101855
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||  |||| ||       ||| |||||||| ||||||| |||||||||||||    
T  39101716 gcttaaatatgtaaatcgtccctgtaatttggtgcgtttttggttttcgtttctgtgtctttttttgttctaaaacaacccctgtatgttaataactttt 39101815  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    || |||||||||||||||||||  || |||||||||||||    
T  39101816 tgcttttcgtccctcccgtcaaactctgttacaaaaacgc 39101855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 8872522 - 8872659
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||       ||| |||||||| |||  |||||||||||||||||    
T  8872522 cttaaatatgtaattcgtccctgtaatttggcgtgtttttggttttcgttcctgtatctttttttgttctaaaacaacccccataagttaataacttttt 8872621  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | |||||||||| ||||||||  || |||||||||||||    
T  8872622 gcttttcgtccc-cccgtcaaactctgttacaaaaacgc 8872659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 39103472 - 39103330
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||       ||| |||||||| || | |||||||||||||    
T  39103472 taggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgttccagtatctttttttgttctaaaacaacccgtataagttaataact 39103373  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||  ||||||||||||||||||  ||  ||||||||||||    
T  39103372 ttttgcgtttcgtccctcccgtcaaactctattacaaaaacgc 39103330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 158 - 293
Target Start/End: Original strand, 36619546 - 36619682
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc-nnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||        ||| |||||||| |||| |||||||||| |||||    
T  36619546 cttaaatatgtaaatcgtccctataatttggcgtgtttttgattttcgtccctgtatcttttttttgttctaaaacaacccctataagttaatagctttt 36619645  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    || |||||||||||||||||||  || ||||||||||    
T  36619646 tgcttttcgtccctcccgtcaaactctgttacaaaaa 36619682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 38626230 - 38626092
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || || |||||||||||||||||| ||||||       ||| |||||||| ||||||||||| |||||||    
T  38626230 aggcttaaatatgtaaaaggtccctgtaagttcgcatgtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgtaagttgataactt 38626131  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    ||||| |||||||||| ||||||||||| |||| |||||    
T  38626130 tttgaatttcgtccctaccgtcaacttctgttaaaaaaa 38626092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 188 - 292
Target Start/End: Complemental strand, 11772727 - 11772623
Alignment:
Q  188 gcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgtta 287  Q
    |||||||||||||||||||||| |||||       ||| |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11772727 gcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccttgtaagttaataactttttgattttcgtccctcctgtcaacttccgtta 11772628  T
Q  288 caaaa 292  Q
    |||||    
T  11772627 caaaa 11772623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 36621287 - 36621145
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||| |||||||||||| | || ||||||||||||||  |||||       ||| |||||||| || ||||  |||||||||    
T  36621287 taggcttaaatatgtaaatcgttcctgtaatttggtgcgtctttggttttcgtccacgtatctttttttgttctaaaacaacccttgtacattaataact 36621188  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||||||||||||||||||  || |||||||||||||    
T  36621187 ttttgcttttcgtccctcccgtcaaactctgttacaaaaacgc 36621145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 1417716 - 1417780
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1417716 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 1417780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 25914793 - 25914857
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  25914793 tagctttcttcatcttcttccttccacctcttttacatattcatcattgtcttcataaattcatc 25914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 27756846 - 27756704
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||       ||| |||||||| |||||||| |||  |||     
T  27756846 taggcttaaatatgtaaatcgtccctctaagttcgcgtgttttttgttttcgtccctgtatctttttttgttctaaaacaaaccctgtaaattataaaca 27756747  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||| |||||| |||||| | |  |||||||||||||    
T  27756746 ttttgcttttggtccctgccgtcagcatttgttacaaaaacgc 27756704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 16308564 - 16308624
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  16308564 aggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 16308624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 503
Target Start/End: Complemental strand, 30333763 - 30333704
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaat 503  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  30333763 tagctttcttcatcttcttccttccacctcttatacatcttcatcattgtcttcataaat 30333704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 159 - 293
Target Start/End: Original strand, 11771201 - 11771335
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||  || |  |||| || ||||||||||| ||||||||||||||||        ||||||||||| ||||||||||| |||||||||||    
T  11771201 ttaaatatgtaaaaggttcgagtaagtttgcgtgtttttgattttcgtccctgtatcttttttttttttaaaacaaaccctgtaagttgataactttttg 11771300  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    | |||||||||| | ||||||||| |||| |||||    
T  11771301 aatttcgtccctactgtcaacttctgttaaaaaaa 11771335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 17552041 - 17552108
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgat-tttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |||| |||||    
T  17552041 taaaacaatccctgcaagttaataactttttgatatttcgtccctctcgtcaacttctgttaaaaaaa 17552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 1418820 - 1418780
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1418820 tgacgtggcaaacttattgatgagtcacacagtgagaggga 1418780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 25914665 - 25914705
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25914665 tgacgtggcaaacttattgatgagtcacacagtgagaggga 25914705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 25916144 - 25916104
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25916144 tgacgtggcaaacttattgatgagtcacacagtgagaggga 25916104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 30333892 - 30333852
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  30333892 tgacgtggcaaacttattgatgagtcacacagtgcgaggga 30333852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 16182651 - 16182608
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgttttt 197  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  16182651 taggcttaaatatgtaaattgtccctataatttggcgtgttttt 16182608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 16310157 - 16310018
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    ||||||||||||||||||||| ||||| || |  |||||||||||||||| ||| |||        ||| |||||||  || |||||||||  ||| |||    
T  16310157 gcttaaatatgtaaatcgtccatgtaagttcgtatgtttttggttttcgttcctatatatttttttgttctaaaacagaccttgtaagttataaacattt 16310058  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    || |||| |||||| |||||| | || |||||||||||||    
T  16310057 tgcttttggtccctgccgtcagcatctgttacaaaaacgc 16310018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 18201403 - 18201345
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||| |||||||||| || |||||||||| |||||||| | ||||||    
T  18201403 gcttaaatatgtaaattgtccctgtaagtttgcgtgttttttgttttcgttcttgtatc 18201345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 350
Target Start/End: Original strand, 30332461 - 30332495
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtga 350  Q
    |||||||||||||||||||||||||||||||||||    
T  30332461 tgacgtggcaaacttattgatgagtcacacagtga 30332495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 42775420 - 42775559
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||| ||| |||||||||| |||||||||||    |||||| ||||||       |||| ||||  |||| ||||||||| || |  |    
T  42775420 ggcttaaatatgtaaaacgttcctgtaatttcgcgtgtttttgcaaatcgtccttgtatctttttttgtttcaaaatcatccttgtaagttactagccgt 42775519  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||   |||||||||||||| |||| ||||||||||||||    
T  42775520 ttgcaattcgtccctcccgttaactcccgttacaaaaacg 42775559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 35988854 - 35988912
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  35988854 aggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 35988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 4285791 - 4285758
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttgg 188  Q
    ||||||||||||||||| ||||||||||||||||    
T  4285791 aggcttaaatatgtaaaccgtccctgtaatttgg 4285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 233; Significance: 1e-128; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 561 - 841
Target Start/End: Complemental strand, 1841386 - 1841106
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaattcccattgacaatggtcagattgacatctcaacactaaaatccacaatgttc 660  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1841386 tcatcatctcactctcaatagacaacttctcacaaacctaaacaaaatccccattgacaatggtcagattaacatctcaacactaaaatccacaatgttc 1841287  T
Q  661 atagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaaaaattcaca 760  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1841286 atagtcccaactaaacttttattgataatatcaaaataaaattataacaacaaaatcctcattgtgaatgctcgaattcccaatattgaaacaattcaca 1841187  T
Q  761 aaattctcaaattgaaaaacctaaagaatgannnnnnnncattaccaactctcgtctcatcattgatctcgcatctctgct 841  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  1841186 aaattctcaaattgaaaaacctaaagaatgattttttttcattaccaactctcgtctcatcattgatctcgcatctctgct 1841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 156 - 328
Target Start/End: Complemental strand, 1841814 - 1841642
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       ||| |||||||| ||||||||||||||||||||    
T  1841814 ggcttaaatatgtaaatcgtccctgaaatttggcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtaagttaataacttt 1841715  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaac 328  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1841714 tttattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacgaaggatgacgtggcaaac 1841642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 159 - 323
Target Start/End: Original strand, 13947751 - 13947914
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||| |||||||| |||| ||||||||||||||||||    
T  13947751 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaacccctataagttaataactttttg 13947849  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13947850 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 13947914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 159 - 323
Target Start/End: Original strand, 14088940 - 14089103
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||| |||||||| |||| ||||||||||||||||||    
T  14088940 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc-tgtatctttttttgttctaaaacaacccctataagttaataactttttg 14089038  T
Q  259 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14089039 attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 14089103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 1840156 - 1840324
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||       ||| |||||||| |||| ||||||||||||||    
T  1840156 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgttcttgtatctttttttgttctaaaacaacccctataagttaataactt 1840255  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  1840256 tttgattttcgtccctcccgtcaacttccgttacaaaaacacacatgtggcaaacagaggatgacgtgg 1840324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 45499304 - 45499445
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| |||||||||||||||||||    
T  45499304 aggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctgtaagttaataactt 45499403  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45499404 tttgattttcgtccctcccgtcaacttccgttacaaaaacgc 45499445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 40303291 - 40303433
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||||||||| |||||       ||| |||||||| |||| |||||||||||||    
T  40303291 taggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatctttttttgttctaaaacaacccctataagttaataact 40303390  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40303391 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 40303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 28563375 - 28563513
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        || |||||||| |||| ||||||||||||||    
T  28563375 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatctttttttcttctaaaacaacccctataagttaataactt 28563474  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||| |||||||||||||||||||  || ||||||||||    
T  28563475 tttgcttttcgtccctcccgtcaaactctgttacaaaaa 28563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 45493093 - 45492954
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||| ||||||    
T  45493093 taggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataact 45492994  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||| |||||||||| ||||||||||| |||| |||||    
T  45492993 ttttgaatttcgtccctaccgtcaacttctgttaaaaaaa 45492954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 45500835 - 45500696
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||| ||||||    
T  45500835 taggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataact 45500736  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||||| |||||||||| ||||||||||| |||| |||||    
T  45500735 ttttgaatttcgtccctaccgtcaacttctgttaaaaaaa 45500696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 40304821 - 40304684
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||       ||| |||||||| ||||||||||| ||||||||    
T  40304821 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgataacttt 40304722  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||| |||||||||| ||||||||||| |||| |||||    
T  40304721 ttgaatttcgtccctaccgtcaacttctgttaaaaaaa 40304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 13948659 - 13948485
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| || |  |   | ||||       |||  ||||||| ||||||||||||||||||    
T  13948659 tagggttaaatatgtaaatcgtccttgtaatttggcatgtttttgattattttttttatatctttttttgttcaaaaacaa-ccctgtaagttaataact 13948561  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttaca----aaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||| |||||||||||||| ||||||||||||||||    |||||||||||||| ||||| |||||||||||||||    
T  13948560 tttttattttcgtccctcctgtcaacttccgttacaaattaaaacgcacatgtgacaaacagaggatgacgtggca 13948485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 14089866 - 14089692
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| || |  |   | ||||       |||  ||||||| ||||||||||||||||||    
T  14089866 tagggttaaatatgtaaatcgtccttgtaatttggcatgtttttgattattttttttatatctttttttgttcaaaaacaa-ccctgtaagttaataact 14089768  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttaca----aaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    |||| |||||||||||||| ||||||||||||||||    |||||||||||||| ||||| |||||||||||||||    
T  14089767 tttttattttcgtccctcctgtcaacttccgttacaaattaaaacgcacatgtgacaaacagaggatgacgtggca 14089692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 16142226 - 16142366
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||| ||||||        ||| |||||||| ||||||||||||  ||| ||    
T  16142226 ggctaaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtctctgtatttttttctgttctaaaacaaaccctgtaagttacaaacgtt 16142325  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||||| ||||||||||| | || |||||||||||||    
T  16142326 ttgattttcggccctcccgtcagcatctgttacaaaaacgc 16142366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 448 - 508
Target Start/End: Complemental strand, 1841502 - 1841442
Alignment:
Q  448 tttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1841502 tttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcatc 1841442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 13948332 - 13948268
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  13948332 tagctttcttcatcttcttccctccacctcttttacatcttcatcattgtcttcataaattcatc 13948268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 14089539 - 14089475
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcatc 508  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14089539 tagctttcttcatcttcttccctccacctcttttacatcttcatcattgtcttcataaattcatc 14089475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 154 - 325
Target Start/End: Complemental strand, 16143657 - 16143486
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  ||||| ||||  | ||||||||||| ||||||||||||||||       ||| |||||||| |||||||||||  |||||    
T  16143657 taggcttaaatatgtaaaaggtccccgtaagcttgcgtgtttttgattttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttgttaact 16143558  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    ||||| |||| ||||||  ||| |||||| |||| ||||||||  ||||| | ||||| || ||||||||||    
T  16143557 ttttggttttagtccctaacgttaacttctgttaaaaaaacgctgatgtgtctaacggtggctgacgtggca 16143486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 38730123 - 38729983
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt-cgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||||||||||| |||||| ||| ||||| || |||||||||||||||| ||||||||||||       ||| |||||||| ||||||||||||  |||     
T  38730123 aggcttaaatatataaatcatccttgtaagttcgcgtgtttttggtttttcgtccctgtatctttttttgttctaaaacaaaccctgtaagttacaaacc 38730024  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaac 294  Q
    ||||||||||||||||| |||| | | || |||||||||||    
T  38730023 ttttgattttcgtccctgccgttagcctctgttacaaaaac 38729983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 38728184 - 38728305
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    |||||||||||||||| |||||||||||| ||  || ||||||||||||||||| ||||||       ||| |||||||| ||||| ||||||  ||| |    
T  38728184 aggcttaaatatgtaa-tcgtccctgtaagttcacgagtttttggttttcgtccatgtatctttttttgttctaaaacaaaccctgcaagttacaaacgt 38728282  T
Q  255 tttgattttcgtccctcccgtca 277  Q
    |||||||||||||||||||||||    
T  38728283 tttgattttcgtccctcccgtca 38728305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 561 - 606
Target Start/End: Complemental strand, 13948217 - 13948172
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaa 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13948217 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaa 13948172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 561 - 606
Target Start/End: Complemental strand, 14089424 - 14089379
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaa 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14089424 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaa 14089379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 44421402 - 44421342
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||    
T  44421402 aggcttaaatatgtaaatcatccctgtaaattggcgtgttttttgttttcgtccttgtatc 44421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 7317392 - 7317530
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||   ||||||||| || ||||||||||||||||||||| ||||||       ||| |||||||| |||| ||||||  |||||||||    
T  7317392 cttaaatatgtaaaagatccctgtaagttcgcgtgtttttggttttcgtccttgtatctttttttgttctaaaacaaaccctataagttgttaacttttt 7317491  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | |||| ||||||   || |||||| |||||| ||||||    
T  7317492 ggttttggtccctaatgttaacttctgttacataaacgc 7317530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 44465147 - 44465009
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||| |||||        ||| |||||||  || |||||||||  ||| ||||    
T  44465147 cttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttctcgtccttgtattttttgttgttctaaaacagaccttgtaagttataaacatttt 44465048  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    | |||| |||||| ||||||   || |||||||||||||    
T  44465047 gcttttggtccctgccgtcagtatctgttacaaaaacgc 44465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 13947922 - 13947962
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13947922 tgacgtggcaaacttattgatgagtcacacagtgagaggga 13947962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 13948461 - 13948421
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13948461 tgacgtggcaaacttattgatgagtcacacagtgagaggga 13948421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 14089129 - 14089169
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14089129 tgacgtggcaaacttattgatgagtcacacagtgagaggga 14089169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 14089668 - 14089628
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14089668 tgacgtggcaaacttattgatgagtcacacagtgagaggga 14089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 1840352 - 1840390
Alignment:
Q  318 acgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1840352 acgtggcaaacttattgatgagtcacacagtgagaggga 1840390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 18161104 - 18161046
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgt 212  Q
    |||| ||||||||||||||||||| | |||||||||||||||||| ||||||| |||||    
T  18161104 taggtttaaatatgtaaatcgtccatataatttggcgtgtttttgcttttcgtacctgt 18161046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 18224905 - 18224847
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  ||||||||||||| | |||||||||||||| |||||||||    
T  18224905 aggcttaaatatgtaaaaggtccctgtaatttagtgtgtttttggttttagtccctgta 18224847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 20587039 - 20587178
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||| |||||||||||||| |||||||||||    |||||||||||||       |||| ||||  |||| ||||||||| || |  |    
T  20587039 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttactagccgt 20587138  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||   ||||||||||| || |||| ||||||||||||||    
T  20587139 ttgcaattcgtccctcctgttaactcccgttacaaaaacg 20587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 313
Target Start/End: Original strand, 22053123 - 22053281
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    |||| |||||||||||||  |||  ||||| || |||||||||| |||||||||||||||||       ||| |||||||| ||| ||||||||  |||     
T  22053123 taggtttaaatatgtaaaaggtctttgtaagttcgcgtgttttttgttttcgtccctgtatctttttttgttctaaaacaa-ccccgtaagttataaacg 22053221  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggag 313  Q
    ||||| |||| ||||||  ||| |||||| |||||||||||||  |  ||||||||||||    
T  22053222 ttttggttttagtccctaacgttaacttctgttacaaaaacgctgagctggcaaacggag 22053281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 22060538 - 22060480
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||    
T  22060538 gcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccctatatc 22060480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 44095423 - 44095495
Alignment:
Q  224 ttttaaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||||||||| |||||||||||  |||| ||||| |||| ||||||  ||| ||||||||||||||||||||    
T  44095423 ttttaaaacaaaccctgtaagttgttaaccttttggttttagtccctaacgttaacttccgttacaaaaacgc 44095495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 6844158 - 6844042
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||  |||| ||||| || ||||||||||||||||| ||| ||||||       ||| |||||||| || ||||||||  || ||    
T  6844158 taggcttaaatatgtaaaaggtccttgtaagttcgcgtgtttttggttttcatccttgtatctttttttgttctaaaacaaaccttgtaagttgttagct 6844059  T
Q  254 ttttgattttcgtccct 270  Q
    ||||| |||| ||||||    
T  6844058 ttttggttttagtccct 6844042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 35588126 - 35588185
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||| ||||||||| ||||| || ||||| ||||||||||||||| |||||    
T  35588126 aggcttaaatatggaaatcgtccatgtaagttcgcgtgcttttggttttcgtccatgtat 35588185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 44097413 - 44097354
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    |||||||||||| ||||  ||| |||||| || |||||||||||||||||||||||||||    
T  44097413 aggcttaaatatataaaaggtctctgtaagttcgcgtgtttttggttttcgtccctgtat 44097354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 20588518 - 20588476
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttg 198  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  20588518 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttg 20588476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 22054333 - 22054391
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  22054333 aggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 22054391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 43516397 - 43516455
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  ||||||||||||| |||  ||||| |||||||||||||||    
T  43516397 aggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 43516455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 28165656 - 28165717
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||  |||| ||||| || ||| |||||||||||| |||||||||||    
T  28165656 taggcttaaatatgtaaaaggtccatgtaagttagcgcgtttttggttttagtccctgtatc 28165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 34591723 - 34591784
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||||||||||||| ||||| || | || ||||| |||||||||| ||||||    
T  34591723 taggcttaaatatgtaaatcgtccatgtaagtttgtgtattttttgttttcgtccttgtatc 34591784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 44492372 - 44492311
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||||||||   ||| ||||| || ||||||||||||||||||||||| ||||    
T  44492372 taggcttaaatatgtaaacgatccatgtaagtttgcgtgtttttggttttcgtccctctatc 44492311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 6842718 - 6842774
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    |||||||||||||  || ||||||| || ||||||||||||||||| ||||||||||    
T  6842718 ttaaatatgtaaaaggttcctgtaagtttgcgtgtttttggttttcatccctgtatc 6842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 18159929 - 18159885
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttg 198  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||    
T  18159929 taggtttaaatatgtaaatcgtccatataatttggcgtgtttttg 18159885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 18308190 - 18308242
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgt 206  Q
    |||| ||||||||||||||||||| | ||||||| |||||||||| |||||||    
T  18308190 taggtttaaatatgtaaatcgtccatataatttgacgtgtttttgtttttcgt 18308242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 689
Target Start/End: Complemental strand, 13948173 - 13948138
Alignment:
Q  654 aatgttcatagtcccaactaaacttttattgataat 689  Q
    |||||||||||||||||||||| |||||||||||||    
T  13948173 aatgttcatagtcccaactaaatttttattgataat 13948138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 689
Target Start/End: Complemental strand, 14089380 - 14089345
Alignment:
Q  654 aatgttcatagtcccaactaaacttttattgataat 689  Q
    |||||||||||||||||||||| |||||||||||||    
T  14089380 aatgttcatagtcccaactaaatttttattgataat 14089345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 10345203 - 10345149
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||  |||||||||||| |||  ||||| |||||||||||||||    
T  10345203 ttaaatatgtaaatgatccctgtaattttgcgcattttttgttttcgtccctgta 10345149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 21716439 - 21716497
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  21716439 aggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 21716497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 44820990 - 44820932
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||||||||| || |||  ||||| |||||||||||||||    
T  44820990 aggcttaaatatgtaaaaggtccctgtaaattcgcgcattttttgttttcgtccctgta 44820932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 22060219 - 22060162
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||  |||| ||||| || |||  |||||||||||||||||||||    
T  22060219 ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctgta 22060162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 24559611 - 24559554
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  24559611 ggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 24559554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 40128986 - 40128929
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||| |||||||||  ||||||||||||| |||  ||||| |||||||||||||||    
T  40128986 ggcttacatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 40128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 44097339 - 44097270
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    |||||||| |||||||||||  |||| ||||| |||| ||||||  ||| |||||| |||||||||||||    
T  44097339 taaaacaaaccctgtaagttgttaaccttttggttttagtccctaacgttaacttctgttacaaaaacgc 44097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 3e-84; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 630 - 841
Target Start/End: Complemental strand, 19083725 - 19083512
Alignment:
Q  630 tgacatctcaacactaaaatccacaatgttcatagtcccaactaaacttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtgaat 729  Q
    ||||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19083725 tgacaactcaacactaaaatccacaatgttcatagtcataaataaacttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtgaat 19083626  T
Q  730 gctcgaattcccaatattgaaaaaattcacaaaattctcaaattgaaaaacctaaagaatga--nnnnnnnncattaccaactctcgtctcatcattgat 827  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  19083625 gctcgaattcccaatattgaaaaaattcacaaaattctcaaattgaaaaacctaaagaatgattttttttttcattaccaactctcgtctcatcattgat 19083526  T
Q  828 ctcgcatctctgct 841  Q
    ||||||||||||||    
T  19083525 ctcgcatctctgct 19083512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 33704990 - 33705127
Alignment:
Q  18 gatctaattccaaggggcactccttaatggaagtacaaagtttatgtcaagcaacattaaccaattttgtttggttaatatcccctaacaaaatgaattt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33704990 gatctaattccaaggggcactccttaatggaagtacaaagtttatgtcaagcaacattaaccaattttctttggttaatatcccctaacaaaatgaattt 33705089  T
Q  118 tcttatccatttatcaacattactcatgaaagaaagta 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33705090 tcttatccatttatcaacattactcatgaaagaaagta 33705127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 157 - 322
Target Start/End: Complemental strand, 19084178 - 19084013
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||       ||| |||||||| ||||||| |||||||||||||    
T  19084178 gcttaaatatgtaaaccgtccctgtaatttagcgtgtttttggtttttgtccctgtatctttttttgttctaaaacaacccctgtatgttaataactttt 19084079  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  19084078 tgattttcgtccctcccgtcaacttccgttacaataacgcacatgtggcaaatggaggatgacgtg 19084013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 8745432 - 8745572
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||| |||||||| ||| ||||||||||||||||    
T  8745432 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctatatctttttttgttctaaaacaacccccgtaagttaataacttt 8745531  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||| |||||||||||||||||||  || |||||||||||||    
T  8745532 ttgcttttcgtccctcccgtcaaactctgttacaaaaacgc 8745572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 19082737 - 19082833
Alignment:
Q  227 taaaacaatccctgtaagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 323  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19082737 taaaacaacccatataagttaataactttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtgg 19082833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 1258500 - 1258358
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaat-aact 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||| |||| || |||||| ||||    
T  1258500 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctataggttaataaact 1258401  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    ||||| |||||||||||||||||||  || |||||||||||||    
T  1258400 ttttgcttttcgtccctcccgtcaaactctgttacaaaaacgc 1258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 1256713 - 1256851
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        || |||||||| |||| ||||||||||||||    
T  1256713 aggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatctttttttattctaaaacaacccctataagttaataactt 1256812  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaa 293  Q
    |||  |||||||||||||||||||  || ||||||||||    
T  1256813 tttacttttcgtccctcccgtcaaactctgttacaaaaa 1256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 8752857 - 8752720
Alignment:
Q  158 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttttt 257  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||| |||||||| ||||| ||||||||||| ||||    
T  8752857 cttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtccctgtatctttttttgttctaaaacaacccctgcaagttaataacctttt 8752758  T
Q  258 gattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    | |||||||||||||||||||  |  ||||||||||||    
T  8752757 gcttttcgtccctcccgtcaaactttgttacaaaaacg 8752720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 2956293 - 2956154
Alignment:
Q  157 gcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttt 256  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||       ||| ||||||||  || |||||||||||||||||    
T  2956293 gcttaaatatgtaaatcgtccctgtaatttgatgtgtttttggttttcgtccttgtatctttttttgttctaaaacaactcccgtaagttaataactttt 2956194  T
Q  257 tgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
    || |||||||||||||||||||  || |||||||||||||    
T  2956193 tgcttttcgtccctcccgtcaaactctgttacaaaaacgc 2956154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 7678707 - 7678533
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc----nnnnnnngttttaaaacaatccctgtaagttaata 250  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||            ||| |||||  ||||||||||||  ||    
T  7678707 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgctttttgtccttgtatcttttttttttcttttcaaaactgtccctgtaagttgtta 7678608  T
Q  251 actttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggca 325  Q
    || ||||| |||||||||||||||| | |||| |||||||||||  ||| ||||| |||||| ||||| ||||||    
T  7678607 acgttttgcttttcgtccctcccgttagcttctgttacaaaaacatacacgtggctaacggatgatgatgtggca 7678533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 608
Target Start/End: Complemental strand, 19083772 - 19083725
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaat 608  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19083772 tcatcatctcactctcaatagacaacttctcacaaacccaatcaaaat 19083725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 19082841 - 19082881
Alignment:
Q  316 tgacgtggcaaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19082841 tgacgtggcaaacttattgatgagtcacacagtgagaggga 19082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 444 - 488
Target Start/End: Complemental strand, 19083875 - 19083831
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatc 488  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  19083875 tagctttcttcatcttcttccttccacctcttttacatcttcatc 19083831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 1443417 - 1443556
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||| ||  |||||||||| ||  ||||||||||||||||||||||||||        ||| |||||||| ||| |||||||  |||||||    
T  1443417 ggcttaaatatgtgaaaggtccctgtaagttcacgtgtttttggttttcgtccctgtatttttttttgttctaaaacaaacccggtaagttgttaacttt 1443516  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    ||| |||| ||||||  ||| |||||  |||| |||||||    
T  1443517 ttggttttagtccctaacgttaacttttgttaaaaaaacg 1443556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 10707674 - 10707734
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    ||||||||||||| ||||| |||||||||| || ||||||||||  |||||||||||||||    
T  10707674 taggcttaaatatataaattgtccctgtaagttcgcgtgttttttattttcgtccctgtat 10707734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 21188596 - 21188649
Alignment:
Q  46 ggaagtacaaagtttatgtcaagcaacattaaccaattttgtttggttaatatc 99  Q
    ||||| |||||||||| | |||||||||||||||| |||| |||||||||||||    
T  21188596 ggaagaacaaagtttaagccaagcaacattaaccatttttctttggttaatatc 21188649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 19083996 - 19083964
Alignment:
Q  324 caaacttattgatgagtcacacagtgagaggga 356  Q
    |||||||||||||||||||||||||||||||||    
T  19083996 caaacttattgatgagtcacacagtgagaggga 19083964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 4496505 - 4496563
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 214  Q
    |||||||||| ||||||||||  ||||| ||  |||||||||||||||||||| |||||    
T  4496505 ggcttaaataggtaaatcgtcattgtaagttcacgtgtttttggttttcgtccatgtat 4496563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 11065714 - 11065656
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||||||||  |||| ||||| || |||  |||||||||||||||||||||    
T  11065714 aggcttaaatatgtaaaaggtccttgtaagttcgcgcatttttggttttcgtccctgta 11065656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 28302224 - 28302166
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||| ||| ||||||||||||||||  || ||||| ||||||||| ||||    
T  28302224 aggcttaaatatgcaaaccgtccctgtaatttgggctgattttgattttcgtccttgta 28302166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 28509849 - 28509907
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||| ||| ||||||||||||||||  || ||||| ||||||||| ||||    
T  28509849 aggcttaaatatgcaaaccgtccctgtaatttgggctgattttgattttcgtccttgta 28509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 19082695 - 19082724
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaa 183  Q
    ||||||||||||||||||||||||||||||    
T  19082695 taggcttaaatatgtaaatcgtccctgtaa 19082724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 141; Significance: 2e-73; HSPs: 5)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 630 - 841
Target Start/End: Complemental strand, 6468 - 6251
Alignment:
Q  630 tgacatctcaacactaaaatccacaatgttcatagtc-ccaactaaac-ttttattgataatatcgaaatcaaattataacaacaaaatcctcattgtga 727  Q
    ||||| |||||||||||||||||||||||||||||||   || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6468 tgacaactcaacactaaaatccacaatgttcatagtcataaattaaactttttattgataatatcaaaatcaaattataacaacaaaatcctcattgtga 6369  T
Q  728 atgctcgaattcccaatattgaaaaaattcacaaaattctcaaattgaaaaacctaaagaatga----nnnnnnnncattaccaactctcgtctcatcat 823  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||    
T  6368 atgctcgaattcccaatattgaaaaaattcacaaaattctcaaattgaaaaacctaaagaatgattttttttttttcattaccaactctcgtctcatcat 6269  T
Q  824 tgatctcgcatctctgct 841  Q
    ||||||||||||||||||    
T  6268 tgatctcgcatctctgct 6251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #2
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 150 - 356
Target Start/End: Original strand, 5369 - 5581
Alignment:
Q  150 aaagtaggcttaaatatgtaaatcgtccctgtaatttggcgtg--tttttggttttcgtccctgt--atcnnnnnnngttttaaaacaatccctgtaagt 245  Q
    |||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||  |         ||| |||||||| |||| |||||    
T  5369 aaagaaggcttaaatatgtaaatcgtccctgtaatttggcgttgttttttggttttcgtccctgttaacttttttttgttctaaaacaacccctataagt 5468  T
Q  246 taat-aactttttg-attttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtggcaaacttattgatgagtcac 343  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5469 taattaactttttttattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtgacaaacggaggatgacgtggcaaacttattgatgagtcac 5568  T
Q  344 acagtgagaggga 356  Q
    |||||||||||||    
T  5569 acagtgagaggga 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 154 - 322
Target Start/End: Complemental strand, 6876 - 6708
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataact 253  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||       ||| ||||| |  ||||||| ||||||||||    
T  6876 taggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggtttttgttcctgtatctttttttgttctaaaatatcccctgtatgttaataact 6777  T
Q  254 ttttgattttcgtccctcccgtcaacttccgttacaaaaacgcacatgtggcaaacggaggatgacgtg 322  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6776 ttttgattttctaccctcccgtcaacttccgttacaataacgcacatgtggcaaatggaggatgacgtg 6708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 444 - 507
Target Start/End: Complemental strand, 6632 - 6569
Alignment:
Q  444 tagctttcttcatcttcttccttccacctctttaacatcttcatcattgtcttcataaattcat 507  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6632 tagctttcttcatcttcttccttccacctcttttacatcttcatcattgtcttcataaattcat 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 608
Target Start/End: Complemental strand, 6515 - 6468
Alignment:
Q  561 tcatcatctcactctcaatagacaacttctcacaaacccaaacaaaat 608  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6515 tcatcatctcactctcaatagacaacttctcacaaacccaatcaaaat 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 6953 - 6831
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||        ||| |||||||| | ||||||||||||||||||    
T  6953 ggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtctctgtatatttttttgttctaaaacaacctctgtaagttaataacttt 6854  T
Q  256 ttgattttcgtccctcccgtcaa 278  Q
    ||| |||||||| ||||||||||    
T  6853 ttgcttttcgtctctcccgtcaa 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 2050 - 2190
Alignment:
Q  155 aggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactt 254  Q
    ||||||||||||| |||  |||| ||||| || ||||||||||||||| ||||||||||||       ||| |||||||| ||| ||||||||  ||| |    
T  2050 aggcttaaatatgaaaaatgtccttgtaagttcgcgtgtttttggtttccgtccctgtatctttttttgttctaaaacaacccccgtaagttataaacgt 2149  T
Q  255 tttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||| |||| ||||||  ||| |||||| ||||||||||||    
T  2150 tttggttttagtccctaacgttaacttctgttacaaaaacg 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 12129 - 12272
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttt-taaaacaatccctgtaagttaataac 252  Q
    ||||||||||||||||||  || || |||| || ||||||||||||||||||||||||||||        ||| |||||||| |||||||||||  ||||    
T  12129 taggcttaaatatgtaaaaggttccggtaagttcgcgtgtttttggttttcgtccctgtatctttttttctttctaaaacaaaccctgtaagttgttaac 12228  T
Q  253 tttttgattttcgtccctcccgtcaacttccgttacaaaaacgc 296  Q
     ||||| |||| ||||||  ||| |||||| || ||||||||||    
T  12229 cttttggttttagtccctaacgttaacttctgtgacaaaaacgc 12272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 193591 - 193730
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataacttt 255  Q
    |||||||||||||||| |||| ||||||||| |||||||||||    |||||||||||||       |||| ||||  |||| |||||||||||| |  |    
T  193591 ggcttaaatatgtaaaacgtctctgtaatttcgcgtgtttttgcaaatcgtccctgtatctttttttgtttcaaaatcatccttgtaagttaatagccgt 193690  T
Q  256 ttgattttcgtccctcccgtcaacttccgttacaaaaacg 295  Q
    |||   |||||||||||||| |||| ||||||||||||||    
T  193691 ttgcaattcgtccctcccgttaactcccgttacaaaaacg 193730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1118 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 2420 - 2549
Alignment:
Q  164 tatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatcnnnnnnngttttaaaacaatccctgtaagttaataactttttgatttt 263  Q
    ||||||||  |||||||||| || ||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||    | ||||| ||||    
T  2420 tatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctatatctttttttattttaaaacaacccctgtaagttatacgcgttttggtttt 2519  T
Q  264 cgtccctcccgtcaacttccgttacaaaaa 293  Q
     ||||||  ||| |||||| ||||||||||    
T  2520 agtccctaacgttaacttctgttacaaaaa 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 4318 - 4259
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    ||||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  4318 taggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 7701 - 7757
Alignment:
Q  159 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||||||||| |||||||||||||| |||||||||||    |||||||||||||    
T  7701 ttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 7757  T

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Target: scaffold0524; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 9130 - 9069
Alignment:
Q  154 taggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 215  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||||    |||||||||||||    
T  9130 taggctttaatatgcaaaacgtccctgtaattttgcgtgtttttgcaaatcgtccctgtatc 9069  T

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Target: scaffold0765 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 416 - 359
Alignment:
Q  156 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgta 213  Q
    |||||||||||| ||| ||||||||||||||||  |  ||||| ||||||||||||||    
T  416 ggcttaaatatgcaaaccgtccctgtaatttgggctcattttgattttcgtccctgta 359  T

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