View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16632_high_60 (Length: 289)
Name: NF16632_high_60
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_high_60 |
 |  |
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| [»] scaffold0054 (2 HSPs) |
 |  |
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| [»] chr1 (9 HSPs) |
 |  |
|
| [»] chr7 (9 HSPs) |
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| [»] chr5 (8 HSPs) |
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| [»] chr2 (6 HSPs) |
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| [»] chr8 (7 HSPs) |
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| [»] chr6 (12 HSPs) |
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| [»] scaffold0214 (2 HSPs) |
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| [»] chr4 (6 HSPs) |
 |  |
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| [»] scaffold0557 (1 HSPs) |
 |  |
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| [»] scaffold0041 (1 HSPs) |
 |  |
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| [»] scaffold0159 (1 HSPs) |
 |  |
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| [»] scaffold0590 (1 HSPs) |
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| [»] scaffold0283 (1 HSPs) |
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| [»] scaffold0760 (1 HSPs) |
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Alignment Details
Target: scaffold0054 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 104 - 289
Target Start/End: Complemental strand, 50093 - 49909
Alignment:
| Q |
104 |
tacccaaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |
|
|
| T |
50093 |
tacccaaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgttgagaatgatttaatgtcttcatcaatctca-cc |
49995 |
T |
 |
| Q |
204 |
ccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49994 |
ccataaatgtctctcatgtttcacgcatattcatcctccatagatatatgaggatgcatcacaaaacaaagtatatattaagtaac |
49909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 28595 - 28696
Alignment:
| Q |
146 |
ggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccata |
245 |
Q |
| |
|
||||| |||||||||||||||| || || |||||||||||||| | || | ||||||| ||||| || ||||||||||||||| ||||||| | |||| |
|
|
| T |
28595 |
ggtttttgtaaattgtgttagcagtggaaaagatttaatgtcttcgtgaaactcacccccgtaaatttcactcatgtttcatgcagattcatctttcata |
28694 |
T |
 |
| Q |
246 |
ga |
247 |
Q |
| |
|
|| |
|
|
| T |
28695 |
ga |
28696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 46352291 - 46352111
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46352291 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgattta-tgtcttcatcaatcccacccccat |
46352193 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46352192 |
aaatgtctctcatgttttatgcatattcatcctccatagatagatgaggatgcatcacaaaacaaagtatatattaagtaac |
46352111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 18505150 - 18504971
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
18505150 |
caaatggctcgagaaataatatagagcatatgtgtactggttt--gtaaattgtgttagagatgagaaagatttaatgtcttcatcaaacccacccccat |
18505053 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||| ||||| ||| | || ||||| |||||||||||| ||||| |
|
|
| T |
18505052 |
aaatgtcactcatgtttaatgcatattcatcctccatagatagatgagtatgtaccataaaactaagtatatattacgtaac |
18504971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 7487054 - 7487235
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||||| |||||||||||||| ||| | | ||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
7487054 |
caaatggctcgagaaataatatagagcatatttgtactaatttctgtaaattgttttaaggatatgaaagatttaaagtcttcatcaaacccacccccat |
7487153 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
7487154 |
aaatgtcactcatgtttcatgtatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
7487235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 281
Target Start/End: Complemental strand, 26704004 - 26703836
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccata |
208 |
Q |
| |
|
|||||||||||||||||||||| | |||||| ||||||||| |||||||||| |||| | || | | |||||||||| ||||||| ||||||| ||| |
|
|
| T |
26704004 |
aaatggctcgagaaataatatagagcatatgcgtactggtta-tgtaaattgtcttagagatggggaagatttaatgttttcatcagtcccacc---ata |
26703909 |
T |
 |
| Q |
209 |
aatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatat |
281 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
26703908 |
aatgtcactcatgtttcatgcatattcatcctccatagaaagatgagtatgcatcacaaaactaagtatatat |
26703836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 279
Target Start/End: Original strand, 19193465 - 19193637
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||| ||| |||||||||||||||||| | ||| ||||||||||||||||||| || | ||||| |
|
|
| T |
19193465 |
caaatggcttgagaaataatatagagcatatgtgtactatttttctgtaaattgtgttagcgaagggaaagatttaatgtcttcatcaaaccaatcccca |
19193564 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatat |
279 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||| || | ||||| |||||||||||||| |||||||| |
|
|
| T |
19193565 |
taacggtcactcatgtttcatgcatattcatcctctatgtatagatgagtatgcatcacaaaactaagtatat |
19193637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 42958415 - 42958526
Alignment:
| Q |
178 |
atttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtat |
277 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||| || ||| |
|
|
| T |
42958415 |
atttaatgtcttcatcaaacccgcccccataaatgtcactcatgtttcatgcatattcatcctccatagttagacgagtatgcatcacaaaactaattat |
42958514 |
T |
 |
| Q |
278 |
atattaagtaac |
289 |
Q |
| |
|
|||||||||||| |
|
|
| T |
42958515 |
atattaagtaac |
42958526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 46757696 - 46757855
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||||||||| ||||||||| | |||||| ||||| || | |||||||||||||| |||||| ||||||||||||||||||| || |||||| | |
|
|
| T |
46757696 |
caaatggctcgaaaaataatatg-agcatatgcgtacttgtat--gtaaattgtgttagttatgagaaagatttaatgtcttcatcaaacctacccccgt |
46757792 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaac |
270 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||| |||| ||||| |||||| ||||||| |
|
|
| T |
46757793 |
aaatgtgacttatgtttcatgcatattcatcttccctagatagatgagtatgcataacaaaac |
46757855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 15722975 - 15723062
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaa |
195 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||| || ||||| ||||| || ||| || || ||| ||||||||||||||||||| |
|
|
| T |
15722975 |
caaatggctcgagaaataatatagagcacatgtgtaatgatttctataaatcgttttaacgatgggaaagatttaatgtcttcatcaa |
15723062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 46354967 - 46354927
Alignment:
| Q |
62 |
tatttcttatattttggttacattctagccctctagaaaca |
102 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
46354967 |
tatttctaatattttggttacattctagccctctagaaaca |
46354927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 3568923 - 3568744
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
3568923 |
caaatgactcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagc-ctgagaatggttta-tgtcttcatcaatcccacccccat |
3568826 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3568825 |
aaatgtctctcatgttttatgcatattcatcctccatagatagatgaggatgcatcacaaaacaaagtatatattaagtaac |
3568744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 39702791 - 39702972
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||| | | ||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
39702791 |
caaatggctcgagaaataatatagagcatatttgtactgatttctgtaaattgttttaaggatatgaaagatttaaagtcttcatcaaacccacccccat |
39702890 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||| |
|
|
| T |
39702891 |
aaatgtcactcatgtttcatgtatattcatcctccatagatagatgagtatgcattacaaaactaagtatatattaagtaac |
39702972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 142 - 289
Target Start/End: Complemental strand, 48520306 - 48520159
Alignment:
| Q |
142 |
tactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctc |
241 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||| |||||||| | |||| || |||| || |||||||||||| |||||| ||| || |
|
|
| T |
48520306 |
tactggtttctgcaaattgtgttagttttgagaaagatttaatgttttcatcaaacacacctccgtaaacttcactcatgtttcatccatattaatcttc |
48520207 |
T |
 |
| Q |
242 |
catagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||||| ||||| ||||||| |||||| |||||| ||||| ||||| |
|
|
| T |
48520206 |
catagatagatgagtatgcatcgcaaaactaagtatgtattaggtaac |
48520159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 3571591 - 3571550
Alignment:
| Q |
61 |
ttatttcttatattttggttacattctagccctctagaaaca |
102 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3571591 |
ttatttctaatattttggttacattctagccctctagaaaca |
3571550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 1966683 - 1966596
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaa |
195 |
Q |
| |
|
|||||| || ||||||||||||| | || ||||||| || ||||| |||||||| ||| || || ||| ||||||||||||||||||| |
|
|
| T |
1966683 |
caaatgacttgagaaataatatagagcacatgtgtaatgatttctataaattgttttaacgatgggaaagatttaatgtcttcatcaa |
1966596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 12315188 - 12315105
Alignment:
| Q |
154 |
taaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcat |
237 |
Q |
| |
|
||||||| ||||||| | ||| |||||| ||||||| | || ||||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
12315188 |
taaattgggttagcggtaggaaagatttattgtcttcgtgaaacccactcccataaatttcactcatgtttcatgcatattcat |
12315105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 18536033 - 18535950
Alignment:
| Q |
154 |
taaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcat |
237 |
Q |
| |
|
||||||||||||||| | ||| |||||| ||||||| | || ||||| | ||||||| || |||||||||||||||||||||| |
|
|
| T |
18536033 |
taaattgtgttagcggtaggaaagatttattgtcttcgtgaaacccactcgcataaatttcactcatgtttcatgcatattcat |
18535950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 1723660 - 1723566
Alignment:
| Q |
153 |
gtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccataga |
247 |
Q |
| |
|
||||||||||||||| | ||| |||||||||| ||| | || ||||||||| || || | ||||||||||||||||||||||| |||||||| |
|
|
| T |
1723660 |
gtaaattgtgttagcagtaggaaagatttaatgttttcgtgaaacccacccccttatattttactcatgtttcatgcatattcatcttccataga |
1723566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 13796416 - 13796486
Alignment:
| Q |
177 |
gatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccataga |
247 |
Q |
| |
|
|||||||||||||| | || | |||||| |||||| || ||||||||||||||| ||||||| | |||||| |
|
|
| T |
13796416 |
gatttaatgtcttcgtgaaactcaccccaataaatttcactcatgtttcatgcagattcatctttcataga |
13796486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 38925850 - 38925671
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
38925850 |
caaatgactcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagc-ctgagaatggttta-tgtcttcatcaatcccacccccat |
38925753 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38925752 |
aaatgtctctcatgttttatgcatattcatcctccatagatagatgaggatgcatcacaaaacaaagtatatattaagtaac |
38925671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 32726599 - 32726725
Alignment:
| Q |
118 |
gagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctct |
217 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||| || |
|
|
| T |
32726599 |
gagaaataatatagagcatatgtgtactggtttctttaaattgtgttagcgatgagaaagatttaatggcttcatcaaaacca-ccccataaatgtcact |
32726697 |
T |
 |
| Q |
218 |
catgtttcatgcatattcatcctccata |
245 |
Q |
| |
|
||||||||||||||||||||| |||||| |
|
|
| T |
32726698 |
catgtttcatgcatattcatcatccata |
32726725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 42882719 - 42882901
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
|||||| || || |||||||||| | ||||||| ||||| ||| ||||||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
42882719 |
caaatgacttgataaataatatagagcatatgtttactgtttttctgtaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
42882818 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| || | |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
42882819 |
taactgccactcatgtttcatgcatattcatcctccatagatagatgattatgcatcacaaaactaagtatatattaagtaac |
42882901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 22545467 - 22545638
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccata |
208 |
Q |
| |
|
|||||||| ||||| ||||||| | |||| ||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||| || | ||||||| |
|
|
| T |
22545467 |
aaatggctggagaa-taatatagagtatatatgtactgctttctgtaaattgtgttagcgttgggaaagatttaatgtcttcatcaaacctatccccata |
22545565 |
T |
 |
| Q |
209 |
aatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatatta |
283 |
Q |
| |
|
| |||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
22545566 |
attgtcactcatgtttcatgcatat--atcctacatagatagatgagtttgcatcacaaaactaagtatatatta |
22545638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 35329099 - 35329017
Alignment:
| Q |
206 |
ataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
35329099 |
ataattgtcactcatgtttcatgcatattcatcctccataggtaaatgagtatgcatcacaaaac-aagtatatattaagtaac |
35329017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 35329497 - 35329414
Alignment:
| Q |
206 |
ataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||| |||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
35329497 |
ataattgtcactcatgttttatgcatattcatcctccataggtaaatgagtatgcatcacaaaactaagtatatattaagtaac |
35329414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 43240059 - 43240100
Alignment:
| Q |
61 |
ttatttcttatattttggttacattctagccctctagaaaca |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43240059 |
ttatttcttatattttggttacattctagccctctagaaaca |
43240100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 38928534 - 38928493
Alignment:
| Q |
61 |
ttatttcttatattttggttacattctagccctctagaaaca |
102 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38928534 |
ttatttctaatattttggttacattctagccctctagaaaca |
38928493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 25417494 - 25417313
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||| ||||||||||||| | ||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
25417494 |
caaatggcttgagaaataatatagagcatatctgtactggtttctgtaaatcatgttagcgctgggaaaaatttaatgtcttcatcaaacccacccccat |
25417395 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||| |||||| |||| |
|
|
| T |
25417394 |
aactgtctctcatgtttcatgcatattcatcctccatagatagatgagtatgcatcacaaacctaagtatgtattaaataac |
25417313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 5783222 - 5783334
Alignment:
| Q |
177 |
gatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagta |
276 |
Q |
| |
|
|||||| |||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
5783222 |
gatttattgtcttcatcaaatccgcccccataaatgtcactcatatttcatgcatattcatcctccatatatagatgagtatgcatcacaaaactaagta |
5783321 |
T |
 |
| Q |
277 |
tatattaagtaac |
289 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5783322 |
tatattaagtaac |
5783334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 29468400 - 29468563
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| || || ||| ||||||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
29468400 |
caaatggcttgataaataatatagagcatatgtttattgtttttctgtaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
29468499 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaac |
270 |
Q |
| |
|
||| || | ||||||||||||| |||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
29468500 |
taactgccactcatgtttcatggatattcatcctccataaatatatgagtatgcatcacaaaac |
29468563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 289
Target Start/End: Original strand, 13364223 - 13364386
Alignment:
| Q |
117 |
cgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctc |
216 |
Q |
| |
|
|||||||||||||| | |||||||||| || ||| ||||||||||||||||||| || ||||||||||||||| ||||||||| |||| | |
|
|
| T |
13364223 |
cgagaaataatatagagcatatgtgtattgatttatgtaaattgtgttagcgcttggatagatttaatgtcttca---------cccccataactgtcac |
13364313 |
T |
 |
| Q |
217 |
tcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||||||| || ||||||||||||||||| | ||||| |||||||||||||| | ||||||||||| |||| |
|
|
| T |
13364314 |
tcatgttttattcatattcatcctccatatatagatgagtatgcatcacaaaactacgtatatattaattaac |
13364386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 25546519 - 25546396
Alignment:
| Q |
110 |
aatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataa |
209 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||| | ||||||||||||||||||||| ||| ||| ||||||| ||||| ||||| |||| | |||||| |
|
|
| T |
25546519 |
aatggcttgagaaataatataaagcatatgtgtattagtttctgtaaattgtgttagcactgggaaagatttaaagtctttatcaaaccca-ctccataa |
25546421 |
T |
 |
| Q |
210 |
atgtctctcatgtttcatgcatatt |
234 |
Q |
| |
|
|| || ||||||||||| ||||| |
|
|
| T |
25546420 |
atttcaaccatgtttcatgaatatt |
25546396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 44481685 - 44481602
Alignment:
| Q |
154 |
taaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcat |
237 |
Q |
| |
|
||||||||||||||| | ||| |||||| ||||||| | || ||||| | ||||||| || |||||||||||||||||||||| |
|
|
| T |
44481685 |
taaattgtgttagcggtaggaaagatttattgtcttcgtgaaacccactcgcataaatttcactcatgtttcatgcatattcat |
44481602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 22932455 - 22932275
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||| ||||||||||||| | |||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
22932455 |
caaatggcttgagaaataatatagagaatatctgtactggtttctgtaaatcgtgttagcgctgggaaatatttaatgtcttcatcaaacccacccccat |
22932356 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| |||| |||||| |||||| |||| |
|
|
| T |
22932355 |
aactgtctctcatgtttcatgcatattcatcctcaatagatagatgagtatgcatcac-aaactaagtatgtattaaataac |
22932275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 7964597 - 7964779
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| ||||| ||| || |||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
7964597 |
caaatggcttgataaataatatagagcatatgtttactgtttttctataaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
7964696 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| || | |||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||| |
|
|
| T |
7964697 |
taactgccactcatgtttcatgcatattcatcctccatagataaatgagtatgcatcacaaagctaagtatatattaagtaac |
7964779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 8224142 - 8223960
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| ||||| ||| ||||||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
8224142 |
caaatggcttgataaataatatagagcatatgtttactgtttttctgtaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
8224043 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| || | ||||||||||||| |||||||||||||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
8224042 |
taactgccactcatgtttcatgtatattcatcctccatagatagatgattatgcatcacaaaactaaatatatattaagtaac |
8223960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 16046816 - 16046970
Alignment:
| Q |
135 |
atatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatatt |
234 |
Q |
| |
|
||||||||||| ||||||||||||||| ||| || || ||| ||||||| ||||||||||| |||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
16046816 |
atatgtgtactagtttctgtaaattgttttaacgatgggaaagatttaaagtcttcatcaaacccaccttcataaatgtaactcatgtttcatgtgtatt |
16046915 |
T |
 |
| Q |
235 |
catcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||||||||| ||| | |||||||||||| | |||||||||||||||||| |
|
|
| T |
16046916 |
catcctccatagatagatgggtatgcatcacaaagctaagtatatattaagtaac |
16046970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 44967735 - 44967652
Alignment:
| Q |
206 |
ataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
44967735 |
ataattgtcactcatgtttcatgcatattcatcctccataggtaaatgagtatgcatcacaaaactaagtatatattaagtaac |
44967652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 43974358 - 43974441
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttca |
191 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
43974358 |
caaatggctcgagaaataatatagtgcatatgtgtattggtttatgtaaattgtgttagcgcttggatagatttaatgtcttca |
43974441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 43974458 - 43974521
Alignment:
| Q |
226 |
atgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||||||||||||||||||||| ||||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
43974458 |
atgcatattcatcctccatagatagatgagtatacatcacaaaactacatatatattaagtaac |
43974521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 288
Target Start/End: Complemental strand, 7567379 - 7567200
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| ||| ||| |||||||| |||||| ||| ||||||||||| |
|
|
| T |
7567379 |
caaatggctcgagaaataatatagaccatatgtgtac-ggtttctgtaaattatgttagcactgggaaagatttaatatcttcagcaaacccacccccat |
7567281 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaa |
288 |
Q |
| |
|
|| |||| |||||||||||||||||||||||| ||||||| ||||| ||||||| |||| | ||||||||||||||||| |
|
|
| T |
7567280 |
aattgtcactcatgtttcatgcatattcatccaccatagatagatgagtatgcatcccaaacctaagtatatattaagtaa |
7567200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 54077028 - 54076934
Alignment:
| Q |
153 |
gtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccataga |
247 |
Q |
| |
|
||||||||||||||| || ||| |||||||||||||| | || ||||||||| || || | ||||||||||||||||||||||| |||||||| |
|
|
| T |
54077028 |
gtaaattgtgttagcaatgggaaagatttaatgtcttcgtgaaacccacccccgtatattttactcatgtttcatgcatattcatcttccataga |
54076934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 23160445 - 23160623
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||| ||||||||||||||| | ||||||||||||||||| |||||||||| ||| || || ||| ||||||| ||||||||||| |||||| || |
|
|
| T |
23160445 |
caaatggatcgagaaataatatagagcatatgtgtactggtttttgtaaattgttttaacgatgggaaagatttaaagtcttcatcaaacccacc---at |
23160541 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
23160542 |
taatgtcactcatgtttcatgtatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
23160623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 31569704 - 31569523
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| |||||||||||||| ||| | | ||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
31569704 |
caaatggctcgagaaataatatagagcatatgtgtactgatttctgtaaattgttttaaggataggaaatatttaaagtcttcatcaaacccacccccat |
31569605 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||| |||||||| |||| ||||||||| | |||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
31569604 |
aaatgtcactcatgttccatgtatattcatctttcatagataaatgagtatgcatcacaaaactaagtatatattaagtaac |
31569523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 109 - 283
Target Start/End: Complemental strand, 21683577 - 21683406
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccata |
208 |
Q |
| |
|
|||||||||||||| ||||||| | |||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| |
|
|
| T |
21683577 |
aaatggctcgagaa-taatatagagtatatatgtactgctttctgtaaattgtgttagcgatgagaaagatttaatgtcttcatcaaacccatccccata |
21683479 |
T |
 |
| Q |
209 |
aatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatatta |
283 |
Q |
| |
|
| |||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
21683478 |
attgtcactcatgtttcatgcatat--atcctacatagatagatgagtttgcatcacaaaactaagtatatatta |
21683406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17585794 - 17585895
Alignment:
| Q |
1 |
taacatatttttattggtgtagcctaatttacgttccataaaacttctaaaatgagttggttatttcttatattttggttacattctagccctctagaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
17585794 |
taacatatttttattggtgtagcctaatttacattccataaaacttctaaagggagttggttttttcttatattttggttatattctagccctctaaaaa |
17585893 |
T |
 |
| Q |
101 |
ca |
102 |
Q |
| |
|
|| |
|
|
| T |
17585894 |
ca |
17585895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 20881650 - 20881821
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccata |
208 |
Q |
| |
|
|||||||||||||| ||||||| | |||| ||||||| ||||||||||||||||||||| || ||| |||||||| |||||||||| |||| ||||||| |
|
|
| T |
20881650 |
aaatggctcgagaa-taatatagagtatatatgtactgctttctgtaaattgtgttagcgttgggaaagatttaatatcttcatcaaacccatccccata |
20881748 |
T |
 |
| Q |
209 |
aatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatatta |
283 |
Q |
| |
|
| |||| |||||||||||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
20881749 |
attgtcactcatgtttcatgcatat--atcctacatagatagatgagtttgcatcacaaaactaagtatatatta |
20881821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 15906744 - 15906926
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| || || ||| ||||||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
15906744 |
caaatggcttgataaataatatagagcatatgtttattgtttttctgtaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
15906843 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| || | |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
15906844 |
taactgccactcatgttgcatgcatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
15906926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 18715685 - 18715504
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||||| || |||||||||| | ||||||| ||||| ||| || |||| |||||||||| || || |||||||| |||||||||| || |||| ||| |
|
|
| T |
18715685 |
aaatggcttgataaataatatagagcatatgtttactgtttttctctaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctcat |
18715586 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
18715585 |
aaccatcactcatgtttcatgcatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatgttaagtaac |
18715504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 281
Target Start/End: Original strand, 20025459 - 20025588
Alignment:
| Q |
152 |
tgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagtta |
251 |
Q |
| |
|
||||||||||||||| | | |||| ||||||||||||||||||| ||||| |||||||||||| |||||||| |||| ||||||||||| |||||| | |
|
|
| T |
20025459 |
tgtaaattgtgttagagataagaaagatttaatgtcttcatcaaacccacacccataaatgtcactcatgttccatgtatattcatccttcatagataga |
20025558 |
T |
 |
| Q |
252 |
tgaggatgcatcacaaaacaaagtatatat |
281 |
Q |
| |
|
|||| |||||||||||||| |||||||||| |
|
|
| T |
20025559 |
tgagtatgcatcacaaaactaagtatatat |
20025588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 14463904 - 14463722
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| || || ||| ||||||| ||||| |||| || || |||||||| |||||||||| || |||| | |
|
|
| T |
14463904 |
caaatggcttgataaataatatagagcatatgtttattgtttttctgtaaaatgtgtcagcgatggaaaagatttaatatcttcatcaaaccaaccctta |
14463805 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| || | |||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||| |
|
|
| T |
14463804 |
taactgccactcatgtttcatgcatattcatcctccatagatagatgagtatgcttcacaaaactaagtatatattaagtaac |
14463722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 108 - 281
Target Start/End: Original strand, 18767403 - 18767572
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||||||||||||||||||| | |||||| |||||||| | |||||||||||||| | |||||| |||||||||||||||||| |||| |||| | |
|
|
| T |
18767403 |
caaatggctcgagaaataatatg-agcatatgcgtactggtat--gtaaattgtgttagagatgagaaaaatttaatgtcttcatcaaaccca-ccccgt |
18767498 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatat |
281 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || |||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
18767499 |
aaatgtgactcatgtttcatgcatattcatctaccctagatagatgagtatgcatcacaaaactaagtatatat |
18767572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 21393062 - 21393174
Alignment:
| Q |
177 |
gatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagta |
276 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||| | ||||| |||||||||||||| || || |
|
|
| T |
21393062 |
gatttaatgtcttcatcaaattcatccccataaatgtcagttatgtttcatgcatattcatcctccatatatagatgagtatgcatcacaaaactaacta |
21393161 |
T |
 |
| Q |
277 |
tatattaagtaac |
289 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21393162 |
tatattaagtaac |
21393174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 14602679 - 14602795
Alignment:
| Q |
110 |
aatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataa |
209 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||| || | ||||||||||||||||| | || ||| ||||||| |||||||||| ||| |||||||| |
|
|
| T |
14602679 |
aatggcttgagaaataatatagagcatatgtgtattgatatctgtaaattgtgttagtgatgtgaaatatttaatatcttcatcaaatccatccccataa |
14602778 |
T |
 |
| Q |
210 |
atgtctctcatgtttca |
226 |
Q |
| |
|
|| || || |||||||| |
|
|
| T |
14602779 |
atttcactaatgtttca |
14602795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0214
Description:
Target: scaffold0214; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 22123 - 21942
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||| |||||||||| || | ||||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || | |||||| |
|
|
| T |
22123 |
caaatggcttgagaaataatctatagcatatatgtactggtttctgtaaatcgtgttagcgctggaaaagatttaatgtcttcatcaaacctagccccat |
22024 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||| |||||| ||||| |||||||||||| | |||||| |||||| |||| |
|
|
| T |
22023 |
aactatctctcttgtttcatgcatattcatccttcatagatagatgagtatgcatcacaaacctaagtatgtattaaataac |
21942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0214; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 28898 - 29079
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| | |||||||||||| ||| | | ||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
28898 |
caaatggctcgagaaataatatagagcatatgtgtactgatgtctgtaaattgtcttaaggatatgaaagatttaaagtcttcatcaaatccacccccat |
28997 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
28998 |
aaatgtcactcatgtttcatttttattcatcctccataggtagatgagtatgcatcacaaaactaagtatatattaagtaac |
29079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 19111759 - 19111941
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| ||||||| ||||| ||| ||||||| |||||||||| ||| || |||||||| |||||||||| | |||| || |
|
|
| T |
19111759 |
caaatggcttgataaataatatagtgcatatgtttactgtttttctgtaaaatgtgttagcgatgaaaaagatttaatatcttcatcaaatcaaccctca |
19111858 |
T |
 |
| Q |
207 |
taaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
19111859 |
taactgtcactcatgtttcatgcatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
19111941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 52374668 - 52374487
Alignment:
| Q |
109 |
aaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
|||||||| || |||||||||| | ||||||| ||||| ||| || |||| |||||||||| || || |||||||| |||||||||| || |||| ||| |
|
|
| T |
52374668 |
aaatggcttgataaataatatagagcatatgtttactgtttttctataaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctcat |
52374569 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| |||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
52374568 |
aactgtcactcatgtttcatgcatattcgtcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
52374487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 43593277 - 43593453
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccat |
207 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || ||||||||||||| | || |||||||||| |||||||||||| ||||||| || |
|
|
| T |
43593277 |
caaatggctcgagaaataatatagggcatatgtgtact---ttaggtaaattgtgttaatgatgggaatgattta-tgtcttcatcaaacccaccct-at |
43593371 |
T |
 |
| Q |
208 |
aaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
43593372 |
aattgtcactcatgtttcatgcatattcatcctccatagatcgatgactatgcatcacaaaactaagtatatattaagtaac |
43593453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 50377702 - 50377615
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggtttctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaa |
195 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||| || ||||| |||||||| ||| || || ||| ||||||||||||||||||| |
|
|
| T |
50377702 |
caaatggctcgagaaataatatagagcacatgtgtaatgatttctataaattgttttaacgatgggaaagatttaatgtcttcatcaa |
50377615 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 18811014 - 18811097
Alignment:
| Q |
154 |
taaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcat |
237 |
Q |
| |
|
||||||||||||||| | ||| |||||| ||||||| | || ||||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
18811014 |
taaattgtgttagcggtaggaaagatttattgtcttcgtgaaacccactcccataaatttcactcatgtttcatgcatattcat |
18811097 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 13757366 - 13757272
Alignment:
| Q |
153 |
gtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccataga |
247 |
Q |
| |
|
||||||||||||||| | ||| |||||||||| ||| | || |||||||||||| || | ||||||||||||||||||||||| |||||||| |
|
|
| T |
13757366 |
gtaaattgtgttagcagtaggaaagatttaatgtattcgtgaaacccacccccatatattttactcatgtttcatgcatattcatcttccataga |
13757272 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0557 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0557
Description:
Target: scaffold0557; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 289
Target Start/End: Complemental strand, 6851 - 6666
Alignment:
| Q |
108 |
caaatggctcgagaaataatatacaacatatgtgtactggttt-ctgtaaattgtgttagcgctgagaatgatttaatgtcttcatcaatcccaccccca |
206 |
Q |
| |
|
||||||||| || |||||||||| | ||||||| ||||| ||| ||||||| |||||||||| || || |||||||| |||||||||| || |||| || |
|
|
| T |
6851 |
caaatggcttgataaataatatagagcatatgtttactgtttttctgtaaaatgtgttagcgatggaaaagatttaatatcttcatcaaaccaaccctca |
6752 |
T |
 |
| Q |
207 |
taaatgtctctcat---gtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
||| |||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
6751 |
taactgtcactcatcatgtttcatgcatattcatcctccatagatagatgagtatgcatcacaaaactaagtatatattaagtaac |
6666 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 31985 - 32104
Alignment:
| Q |
170 |
tgagaatgatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaa |
269 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
31985 |
tgagaaagatttaatgtcttcatcaaacccacccccataactatctctcatgtttcatgcatattcatcctccatagatagatgagtgtgcatcacaaac |
32084 |
T |
 |
| Q |
270 |
caaagtatatattaagtaac |
289 |
Q |
| |
|
| |||||| |||||| |||| |
|
|
| T |
32085 |
ctaagtatgtattaaataac |
32104 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0159 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0159
Description:
Target: scaffold0159; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 36685 - 36797
Alignment:
| Q |
177 |
gatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagta |
276 |
Q |
| |
|
|||||| |||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
36685 |
gatttattgtcttcatcaaatccgcccccataaatgtcactcatatttcatgcatattcatcctccatatatagatgagtatgcatcacaaaactaagta |
36784 |
T |
 |
| Q |
277 |
tatattaagtaac |
289 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36785 |
tatattaagtaac |
36797 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0590 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0590
Description:
Target: scaffold0590; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 9360 - 9248
Alignment:
| Q |
177 |
gatttaatgtcttcatcaatcccacccccataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagta |
276 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||| | ||||| |||||||||||||| || || |
|
|
| T |
9360 |
gatttaatgtcttcatcaaatccatccccataaatgtcagtgatgtttcatgcatattcatcctccatatatagatgagtatgcatcacaaaactaacta |
9261 |
T |
 |
| Q |
277 |
tatattaagtaac |
289 |
Q |
| |
|
||||||||||||| |
|
|
| T |
9260 |
tatattaagtaac |
9248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0283 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0283
Description:
Target: scaffold0283; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 13869 - 13786
Alignment:
| Q |
206 |
ataaatgtctctcatgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
13869 |
ataattgtcactcatgtttcatgcatattcatcctccataggtaaatgagtatgcatcacaaaactaagtatatattaagtaac |
13786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0760 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0760
Description:
Target: scaffold0760; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 1 - 71
Alignment:
| Q |
219 |
atgtttcatgcatattcatcctccatagagttatgaggatgcatcacaaaacaaagtatatattaagtaac |
289 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
1 |
atgtttcatgcatattcatcctccatagttagacgagtatgcatcacaaaactaattatatattaagtaac |
71 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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