View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16632_high_61 (Length: 288)
Name: NF16632_high_61
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_high_61 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 40469048 - 40469276
Alignment:
| Q |
17 |
actatgcggctatataaagttcatatcagataaagagtaaagtgataaaggttattttaatgattcttacaagttttagtgacatattaatattggttaa |
116 |
Q |
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| T |
40469048 |
actatgcgactatataaagttcatatcagataaagagtaaagtgataaaggtgattttaatgattcttacaagttttagtgacatattaatactggttaa |
40469147 |
T |
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| Q |
117 |
aaaagttgagagaggtgttcaagtacattaatagcataaaattcgctctatttatctatcattcatttattgtctatttatcataaagatacagtga--- |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| | | |
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| T |
40469148 |
aaaagttgagagaggtgttcaagtacattaatagcatagaattcgttctatttatctatcattcatttattgtctatttatcagaaagatatacataaat |
40469247 |
T |
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| Q |
214 |
-aaagattaacgagattcatttacttaac |
241 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
40469248 |
gaaagattaacgagattcatttacttaac |
40469276 |
T |
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