View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16632_high_62 (Length: 283)
Name: NF16632_high_62
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_high_62 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 46968131 - 46968394
Alignment:
| Q |
1 |
aataaacgagatcagaatcatgcacgcatacatgtaagttaagttaaaaaatattttgtagttattttaaaaatatagttataagctaagcttatgtatt |
100 |
Q |
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| T |
46968131 |
aataaacgagatcagaatcatgcacgcatacatgtacgttaagttaaaaagtattttgtagttattttgaaaatatagttataagctaagcttatgtatt |
46968230 |
T |
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| Q |
101 |
tggtcaaaaagagtaagctcgtcaatcttataaatcttatgaacttagtcttagcgtattgtcccagtgtcgtggtcatacatatatgaaattatgattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46968231 |
tggtcaaaaagagtaagctcgtcaatcttataaatcttatgaacttagtcttagcgtattgtcccagtgtcgtggtcatacatatatgaaattatgattt |
46968330 |
T |
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| Q |
201 |
gcaagagtgaccgataagaatacaaacaaaaagttgcttcaaataaaaagcataacaaatattt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46968331 |
gcaagagtgaccgataagaatacaaacaaaaagttgcttcaaataaaaagcataacaaatattt |
46968394 |
T |
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