View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16632_high_71 (Length: 246)
Name: NF16632_high_71
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_high_71 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 20631125 - 20631335
Alignment:
| Q |
16 |
tttctgaatttgcaatgccataaaaaggttctgcagaacatcaccagtggatggcctctccactcctctttcagccaaacatttcatagcaacacctaaa |
115 |
Q |
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| T |
20631125 |
tttctgaatttgcaatgccataaaaaggttctgcagaacatcaccagtggatggcctctccactcctctttcagccaaacatttcatagcaatacctaaa |
20631224 |
T |
|
| Q |
116 |
tataactcaaggcactccttaactatgtttccttccaaattcggatccacgatttcttccacatttccattctcaaagcaaaacttagcccattcagcca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20631225 |
tataactcaaggcactccttaactatgtttccttccaaatttggatccacgatttcttccacatttccattctcaaagcaaaacttagcccattcagcca |
20631324 |
T |
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| Q |
216 |
agtttaaatgc |
226 |
Q |
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||||||||||| |
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| T |
20631325 |
agtttaaatgc |
20631335 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 20647224 - 20647434
Alignment:
| Q |
16 |
tttctgaatttgcaatgccataaaaaggttctgcagaacatcaccagtggatggcctctccactcctctttcagccaaacatttcatagcaacacctaaa |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
20647224 |
tttctgaatttgcaatgccataaaaaggttctgcagaacatcaccagtggatggcctctccactcctctttcagccaaacatttcatagcaatacctaaa |
20647323 |
T |
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| Q |
116 |
tataactcaaggcactccttaactatgtttccttccaaattcggatccacgatttcttccacatttccattctcaaagcaaaacttagcccattcagcca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20647324 |
tataactcaaggcactccttaactatgtttccttccaaatttggatccacgatttcttccacatttccattctcaaagcaaaacttagcccattcagcca |
20647423 |
T |
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| Q |
216 |
agtttaaatgc |
226 |
Q |
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||||||||||| |
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| T |
20647424 |
agtttaaatgc |
20647434 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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