View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16632_low_47 (Length: 349)
Name: NF16632_low_47
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_low_47 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 16 - 336
Target Start/End: Original strand, 13244613 - 13244933
Alignment:
| Q |
16 |
gatgcagcaaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcata |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244613 |
gatgcaacaaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagctagaggagggattataaatgtaccgtcttacaagttcata |
13244712 |
T |
|
| Q |
116 |
gcattcaatgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaagg |
215 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
13244713 |
gctttcaatgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttatggaagtttcgcatacagg |
13244812 |
T |
|
| Q |
216 |
tggtggaaggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttgatataacaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244813 |
tggtggaaggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaaacacggcttaaaggtcgaagtcagtaaaagatgcatttgatataacaa |
13244912 |
T |
|
| Q |
316 |
agttgtaagtgtgatgcatgt |
336 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
13244913 |
agttgtaagtgtgatgcatgt |
13244933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 12963974 - 12964180
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| | || || ||||| |||||||||||||||| |
|
|
| T |
12963974 |
caaatatggggagaagattgcttggaatttaagcctgaaagatggatatcaaatagaggagaaattatacaagtgccatcttataagttcatagcattca |
12964073 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| | ||||||||||||||| |||| | |||||||| |
|
|
| T |
12964074 |
atgcaggtcctagaagttgtattgggaaagatattagctttgttcaaatgaaaatggttgctgctaatgtgttgtggaagtttcacatagaagtggtgga |
12964173 |
T |
|
| Q |
223 |
aggtcac |
229 |
Q |
| |
|
||||||| |
|
|
| T |
12964174 |
aggtcac |
12964180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 24 - 307
Target Start/End: Original strand, 30368208 - 30368491
Alignment:
| Q |
24 |
aaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaa |
123 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| |||||| |||||| ||||||| |||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
30368208 |
aaatatggggagaagattgcatggaatttaagcctgagagatgggtatcagagagaggacacattatacatgtaccatcttacaagttcatagctttcaa |
30368307 |
T |
|
| Q |
124 |
tgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtggaa |
223 |
Q |
| |
|
| |||| |||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| | ||||| |||||||||| |||| |||| |||||| |
|
|
| T |
30368308 |
tacaggacctagaagttgtatgggtaaagatcttagtttcgttcaaatgaagatggttgcagctgccttgttatggaagtttcacatacaggtcgtggaa |
30368407 |
T |
|
| Q |
224 |
ggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttga |
307 |
Q |
| |
|
|||||||||||||| | || ||||| ||||| || | ||||| || ||||| || ||| | || | |||||||||||||||| |
|
|
| T |
30368408 |
ggtcaccctgtaacccctagggcttctgttgtcctttgaatgaaacatggcttgaacgtcaaggttactaaaagatgcatttga |
30368491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 13271675 - 13271474
Alignment:
| Q |
27 |
tatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaatgc |
126 |
Q |
| |
|
||||||| | |||||||||||| ||||||||||| ||||||||||||| | |||| |||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
13271675 |
tatggggtggtgattgcttggagtttaagcctgagagatggatatcagataaaggacaaattatacatgtaccatcttacaagttcatagcattcaatgc |
13271576 |
T |
|
| Q |
127 |
aggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtggaaggt |
226 |
Q |
| |
|
|||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||| | || |||||||||| |||| | |||||||||||| |
|
|
| T |
13271575 |
aggtcctagaagctgtcttgggaaagatattagctttattcaaatgaaaatggttgcagcttctgtattatggaagtttcacatacatgtggtggaaggt |
13271476 |
T |
|
| Q |
227 |
ca |
228 |
Q |
| |
|
|| |
|
|
| T |
13271475 |
ca |
13271474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 305
Target Start/End: Complemental strand, 13101093 - 13100812
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| |||||| | |||| ||||||| |||||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
13101093 |
caaatatggggagaagactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttca |
13100994 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|| |||| |||||||||||||| || || ||| |||||||| |||||||||| ||||| |||||| ||||||| |||||||| |||| |||||||||| |
|
|
| T |
13100993 |
at-caggacctagaagttgtatgggtaaggatattagcttcattcaaatgaagatggtcgcagctgctttgttaccgaagtttcacatacaggtggtgga |
13100895 |
T |
|
| Q |
223 |
aggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcattt |
305 |
Q |
| |
|
|||||||||| |||| | || |||| |||| ||| |||||| || ||||| |||||| |||||| |||||||||||||| |
|
|
| T |
13100894 |
aggtcaccctataaccccgaagctttcttttgttcttcacatgaaacatggcttgaaggtcaaagtcactaaaagatgcattt |
13100812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 23 - 307
Target Start/End: Complemental strand, 13007293 - 13007009
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| |||||| | |||| ||||||| |||||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
13007293 |
caaatatggggagaagactgcatggaatttaagcctgagagatgggtgtcagagagaggacacattatacatgtaccatcttacaagttcatagctttca |
13007194 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|| ||||||||||||||||||| || || ||| |||||||| |||||||||| ||||| ||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
13007193 |
atacaggtcctagaagttgtatgggcaaggatattagcttcattcaaatgaagatggtcgcagcagctttgttaccaaagtttcacataaaggtggtggc |
13007094 |
T |
|
| Q |
223 |
aggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttga |
307 |
Q |
| |
|
|||||||||| |||| | || |||| |||| ||| |||||| || ||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
13007093 |
aggtcaccctataaccccgaagctttcttttgttcttcacatgaaacatggcttgaaggttaaagtcactaaaagatgcatttga |
13007009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 23 - 307
Target Start/End: Complemental strand, 13204552 - 13204268
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| |||||| |||||| || |||| |||||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
13204552 |
caaatatggggagaagactgcatggaatttaagcctgagagatgggtatcagagacaggacacattatacatgtaccatcttacaagttcatagctttca |
13204453 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|| ||||||||||||||||| | || ||||||||||| ||| |||||||||| ||||| |||||| ||||||| ||| |||| ||||||| | ||||| |
|
|
| T |
13204452 |
atacaggtcctagaagttgtttgggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaattttcacataaagatagtgga |
13204353 |
T |
|
| Q |
223 |
aggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttga |
307 |
Q |
| |
|
||||||||||||||| | | | |||| |||| ||| |||||| | || |||||||| |||||| |||||||||||||||| |
|
|
| T |
13204352 |
aggtcaccctgtaaccccaaagatttcttttgttcttcacatgaaatatggtttaaaggttaaagtcactaaaagatgcatttga |
13204268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 13070275 - 13070489
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| |||||| |||||| || |||| |||||| |||| || ||||||||||||||||| |||| |
|
|
| T |
13070275 |
caaatatggggagaagactgcatggaatttaagcctgagagatgggtatcagagacaggacacattatacatgttccatcttacaagttcatagctttca |
13070374 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|| ||||||| ||||||||| | || ||||||||||| ||| |||||||||| ||||| |||||| ||||||| |||||||| |||| |||||||||| |
|
|
| T |
13070375 |
atacaggtccgagaagttgtttgggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaagtttcacatacaggtggtgga |
13070474 |
T |
|
| Q |
223 |
aggtcaccctgtaac |
237 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13070475 |
aggtcaccctgtaac |
13070489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 13094492 - 13094278
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||| |||| |||||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
13094492 |
caaatatggggagaagactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccatcttacaagttcatagctttca |
13094393 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
| |||| || |||| |||||| || |||||| |||| ||| |||||||||| ||||| |||||| ||||||| ||||||||| |||| |||||||||| |
|
|
| T |
13094392 |
acacaggacccagaatttgtataggtaaagatattagtttcattcaaatgaagatggtcgcagctgctttgttacggaagtttcacatacaggtggtgga |
13094293 |
T |
|
| Q |
223 |
aggtcaccctgtaac |
237 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13094292 |
aggtcaccctgtaac |
13094278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 13129921 - 13129707
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
|||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||| |||| |||||| ||||||| |||||||||||| |||| |||| |
|
|
| T |
13129921 |
caaatatggggagaagactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccatcttacaagttcgtagctttca |
13129822 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
| |||| || |||| |||||| || ||||||||||| ||| |||||||||| ||||| |||||| ||||||| |||||||| |||| |||||||||| |
|
|
| T |
13129821 |
acacaggacccagaatttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacagaagtttcacatacaggtggtgga |
13129722 |
T |
|
| Q |
223 |
aggtcaccctgtaac |
237 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13129721 |
aggtcaccctgtaac |
13129707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 312
Target Start/End: Complemental strand, 13086200 - 13085911
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
||||||||||| | ||| |||| ||||||||||| || ||||||||||||| | |||| ||| | ||||||| |||| ||||||||||||||| | |
|
|
| T |
13086200 |
caaatatggggtaaggatcgcttcgaatttaagcccgagagatggatatcagataaaggacatattttgcatgtaccatcttgcaagttcatagcattta |
13086101 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||| | |||||||||||||||||||||||| || |||| |||||||||| |||| | || ||||| |
|
|
| T |
13086100 |
atgcaggtcctcgaagttgtcttgggaaagatattagcattgttcaaatgaaaatggttgcagctgctatgttatggaagtttcacatacaagttgtgga |
13086001 |
T |
|
| Q |
223 |
aggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttgatataa |
312 |
Q |
| |
|
|||||| ||||||| | ||| ||||||||| | |||||| | || || || || ||| |||| ||||||||||| ||||||||||| |
|
|
| T |
13086000 |
aggtcattctgtaactccaagagtttctattgttctccgcatggaacatggattcaaagtcaaagttagtaaaagatgaatttgatataa |
13085911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 13080957 - 13081253
Alignment:
| Q |
16 |
gatgcagcaaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcata |
115 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||| |||||| | || |||||||| ||||||||| |
|
|
| T |
13080957 |
gatggagcaaatatggggagaggattgcttggagtttaagcctgagagatggatatcagatagaggacaaattatacaagtgccgtcttataagttcata |
13081056 |
T |
|
| Q |
116 |
gcattcaatgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaagg |
215 |
Q |
| |
|
|| || ||||||||||| ||||| ||| ||||||||||| |||| || ||||||||||||||||||||||| | | || | ||||||| ||| ||| |
|
|
| T |
13081057 |
gcgtttaatgcaggtccaagaagctgtcttgggaaagatattagttttcttcaaatgaaaatggttgcagctgcagttttatttaagtttcacattcagg |
13081156 |
T |
|
| Q |
216 |
tggtggaaggtcaccctgtaacgctgagaacttctattgtcgttcgcatgaagcacggcttaaaggtcgaagtcagtaaaagatgcatttgatataa |
312 |
Q |
| |
|
|||||||||||||| | ||| | || ||||||| || |||||||| | || ||||| |||||| || | |||||||||||||||||||||| |
|
|
| T |
13081157 |
tggtggaaggtcactcaataattcctagggtttctattctccttcgcatggaacatggctttaaggtcaaaattcgtaaaagatgcatttgatataa |
13081253 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 13161610 - 13161400
Alignment:
| Q |
27 |
tatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaatgc |
126 |
Q |
| |
|
||||||| || || ||| |||||||||||||||| ||||||||||| | ||| |||| |||||| ||||||| ||||||||||||||| | ||||| | |
|
|
| T |
13161610 |
tatggggggaagactgcatggaatttaagcctgagagatggatatctgagaggggagatattatacatgtaccttcttacaagttcatatctttcaacac |
13161511 |
T |
|
| Q |
127 |
aggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtggaaggt |
226 |
Q |
| |
|
||| || |||| |||||| || ||||||||||| ||| |||||||||| ||||| |||||| ||||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
13161510 |
aggacccagaatttgtataggtaaagatcttagtttcattcaaatgaagatggtcgcagctgctttgttacggaagtttcacatacaggtggtggaaggt |
13161411 |
T |
|
| Q |
227 |
caccctgtaac |
237 |
Q |
| |
|
|||| |||||| |
|
|
| T |
13161410 |
caccttgtaac |
13161400 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 19279267 - 19279473
Alignment:
| Q |
23 |
caaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattca |
122 |
Q |
| |
|
||||||||||| ||||||||| | |||||| |||||| ||||||||||| | |||||| |||||| ||||||| || |||||||||||||| || | |
|
|
| T |
19279267 |
caaatatggggtgatgattgcctagaatttcggcctgagagatggatatcggatagaggacaaattatacatgtaccatcgtacaagttcatagcgttta |
19279366 |
T |
|
| Q |
123 |
atgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtgga |
222 |
Q |
| |
|
|||||||||| ||||| ||| | || |||||| ||| ||| ||||||||||||||||||||||| || | || ||||||||||||||| |||| ||||| |
|
|
| T |
19279367 |
atgcaggtccgagaagctgtctcggaaaagatattactttccttcaaatgaaaatggttgcagctgctgtattatggaagtttcgcatacaggtcgtgga |
19279466 |
T |
|
| Q |
223 |
aggtcac |
229 |
Q |
| |
|
||||||| |
|
|
| T |
19279467 |
aggtcac |
19279473 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 13065313 - 13065468
Alignment:
| Q |
24 |
aaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaa |
123 |
Q |
| |
|
||||||||||||| || ||| |||||||||||||||| |||||||||||| || ||| |||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
13065313 |
aaatatggggagaagactgcatggaatttaagcctgagagatggatatcaaaaagcggacaaattatacatgtaccgtcttacaagttcatagctttcaa |
13065412 |
T |
|
| Q |
124 |
tgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatgg |
179 |
Q |
| |
|
|||||| || ||||||||| | || |||||| | | ||||||| ||||||| |||| |
|
|
| T |
13065413 |
tgcagggccaagaagttgtttgggtaaagatatcaccttcgttgaaatgaagatgg |
13065468 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 13010739 - 13010661
Alignment:
| Q |
150 |
aagatcttagcttcgttcaaatgaaaatggttgcagcttctttgttgtggaagtttcgcataaaggtggtggaaggtca |
228 |
Q |
| |
|
|||||||||| ||| ||| |||||| ||||| |||||| |||||| ||||| ||||||||| | |||||||||||||| |
|
|
| T |
13010739 |
aagatcttagtttcattctaatgaagatggtcgcagctgatttgttatggaaatttcgcatacaagtggtggaaggtca |
13010661 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 31380253 - 31380342
Alignment:
| Q |
106 |
caagttcatagcattcaatgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgcagcttctttgtt |
195 |
Q |
| |
|
|||||||||| | |||||| |||| || ||||||||||||| ||||||||||| ||| ||||||| || ||| ||| ||||||||||| |
|
|
| T |
31380253 |
caagttcatatctttcaatacaggacccggaagttgtattggtaaagatcttagtttcattcaaattaagatgtctgcggcttctttgtt |
31380342 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 12164365 - 12164206
Alignment:
| Q |
24 |
aaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaa |
123 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| || || ||||| || | ||||||||| | |||| || |||||||||||||| || || || |
|
|
| T |
12164365 |
aaatatggggagaagattgcttggaatttaagccagagaggtggatttctcaaaaaggagggatagtttatgttccttcttacaagttcattgcttttaa |
12164266 |
T |
|
| Q |
124 |
tgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgc |
183 |
Q |
| |
|
||| || || || |||||| | || || ||| | |||||| || | |||||||||||||| |
|
|
| T |
12164265 |
tgctggaccaaggagttgtttgggtaaggatataagcttcattgagatgaaaatggttgc |
12164206 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 12175890 - 12175731
Alignment:
| Q |
24 |
aaatatggggagatgattgcttggaatttaagcctgaaagatggatatcagcgagaggagggattataaatgtaccgtcttacaagttcatagcattcaa |
123 |
Q |
| |
|
||||||||||||| ||||| ||| ||||||| || || || ||||| || || ||||||||| || |||| || |||||||||||||| || ||||| |
|
|
| T |
12175890 |
aaatatggggagaagattgtttgaaatttaaaccagagaggtggatttctaagaaaggagggataattcatgttccctcttacaagttcattgctttcaa |
12175791 |
T |
|
| Q |
124 |
tgcaggtcctagaagttgtattgggaaagatcttagcttcgttcaaatgaaaatggttgc |
183 |
Q |
| |
|
||| || || || |||||| | || || ||| | |||||| || | |||||||||||||| |
|
|
| T |
12175790 |
tgctggaccaaggagttgtttgggtaaggatataagcttcattgagatgaaaatggttgc |
12175731 |
T |
|
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