View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16632_low_77 (Length: 250)
Name: NF16632_low_77
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_low_77 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 52067196 - 52066976
Alignment:
| Q |
10 |
aagaatatgccacctaatgcttaagatcttattgtgtcggaatatctttttctttgtaaacgagaattcggccaaaagataagtaaagacggactaaaaa |
109 |
Q |
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| T |
52067196 |
aagaaaatgccacctaatgcttaagatcttattgtgtcggaatatctttttctttgtaaacgagaattcggccaaaagataagtaaagacggactaaaaa |
52067097 |
T |
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| Q |
110 |
ttgttcaattttcaagttcttccaaacaattcgtactttgtggagttcattaacaacttaaacataattgcaattggtttatttgctctgcttgtcaatt |
209 |
Q |
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| T |
52067096 |
ttgttcaattttcaagttcttccaaacaattcgtacttagtggagttcattaacaacttaaatataattgcaattggtttatttgctctgcttgtcaatt |
52066997 |
T |
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| Q |
210 |
acttatttataatttgttgga |
230 |
Q |
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| T |
52066996 |
acttatttataatttgttgga |
52066976 |
T |
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